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On the Two-Step Hybrid Design for Augmenting Randomized Trials Using Real-World Data. 基于真实世界数据的扩大随机试验的两步混合设计
IF 1.3 4区 医学 Q3 MATHEMATICAL & COMPUTATIONAL BIOLOGY Pub Date : 2025-10-08 DOI: 10.1080/19466315.2025.2547855
Jiapeng Xu, Ruben P A van Eijk, Alicia Ellis, Tianyu Pan, Lorene M Nelson, Kit C B Roes, Marc van Dijk, Maria Sarno, Leonard H van den Berg, Lu Tian, Ying Lu

Hybrid clinical trials, which borrow real-world data (RWD) from patient registries, claims databases, or electronic health records (EHRs) to augment randomized clinical trials, are of increasing interest. Hybrid clinical trials are especially relevant for rare diseases, where the recruitment of large sample sizes may be challenging. While these trials may better use available information, they assume that the RWD and randomized control arm are exchangeable. Violating this assumption can induce bias, inflate Type I error, or adversely affect statistical power. A two-step hybrid design first tests the exchangeability between randomized control arm and external data sources before incorporating RWD as a comparator for statistical inferences (Yuan et al. 2019). This approach reduces the chance of inappropriate borrowing but may simultaneously inflate the Type I error rate. We propose four different methods to control the Type I error rate under the exchangeability assumption. Approach 1 estimates the variance of the overall test statistic and rejects the null hypothesis based on a Z-test. Approach 2 uses a numerical method to determine the exact critical value for Type I error control. Approach 3 splits the Type I error rates according to the equivalence test outcome. Approach 4 adjusts the critical value only when equivalence is established. We illustrate these methods using a hypothetical scenario in the context of amyotrophic lateral sclerosis (ALS). We evaluate the Type I error and power under various clinical trial conditions in comparison with the Bayesian power prior approach (Ibrahim et al. 2015). We demonstrate that our proposed methods and Bayesian power prior control Type I error and increase power under the exchangeability assumption, whereas the method proposed by Yuan et al. (2019) results in an increased Type I error. In the scenario where the exchangeability assumption does not hold, all methods fail to control the Type I error. Our proposed methods, however, limit a maximum Type I error inflation ranging from 6% to 8%, which compares favorably to 10% for Yuan et al. (2019) and 16% for the Bayesian power prior. All methods increase statistical power under the exchangeability condition but may lead to a loss of statistical power when the exchangeability assumption is violated.

混合临床试验越来越受到人们的关注,混合临床试验从患者登记、索赔数据库或电子健康记录(EHRs)中借用真实数据(RWD)来增强随机临床试验。混合临床试验尤其适用于罕见病,在罕见病中招募大样本量可能具有挑战性。虽然这些试验可能更好地利用现有信息,但它们假设RWD和随机对照组是可互换的。违反这一假设可能导致偏差,扩大I型误差,或对统计能力产生不利影响。两步混合设计首先测试随机对照臂和外部数据源之间的互换性,然后将RWD作为统计推断的比较指标(Yuan et al. 2019)。这种方法减少了不适当借贷的机会,但可能同时增加第一类错误率。在互换性假设下,我们提出了四种不同的方法来控制第一类错误率。方法1估计总体检验统计量的方差,并根据z检验拒绝原假设。方法2使用数值方法来确定第一类误差控制的确切临界值。方法3根据等效性测试结果拆分第一类错误率。方法4仅在建立等效性时才调整临界值。我们在肌萎缩性侧索硬化症(ALS)的背景下用一个假设的场景来说明这些方法。与贝叶斯功率先验方法相比,我们评估了各种临床试验条件下的I型误差和功率(Ibrahim et al. 2015)。我们证明,在互换性假设下,我们提出的方法和贝叶斯功率先验控制I型误差并增加功率,而Yuan等人(2019)提出的方法导致I型误差增加。在互换性假设不成立的场景中,所有方法都无法控制第一类错误。然而,我们提出的方法将最大I型误差膨胀限制在6%至8%之间,相比之下,Yuan等人(2019)的误差为10%,贝叶斯幂先验的误差为16%。所有方法在可互换性条件下都增加了统计能力,但在违反可互换性假设时可能导致统计能力的丧失。
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引用次数: 0
A novel longitudinal rank-sum test for multiple primary endpoints in clinical trials: Applications to neurodegenerative disorders. 临床试验中多个主要终点的新型纵向秩和检验:神经退行性疾病的应用。
IF 1.3 4区 医学 Q3 MATHEMATICAL & COMPUTATIONAL BIOLOGY Pub Date : 2025-03-17 DOI: 10.1080/19466315.2025.2458018
Xiaoming Xu, Dhrubajyoti Ghosh, Sheng Luo

Neurodegenerative disorders such as Alzheimer's disease (AD) present a significant global health challenge, characterized by cognitive decline, functional impairment, and other debilitating effects. Current AD clinical trials often assess multiple longitudinal primary endpoints to comprehensively evaluate treatment efficacy. Traditional methods, however, may fail to capture global treatment effects, require larger sample sizes due to multiplicity adjustments, and may not fully utilize the available longitudinal data. To address these limitations, we introduce the Longitudinal Rank Sum Test (LRST), a novel nonparametric rank-based omnibus test statistic. The LRST enables a comprehensive assessment of treatment efficacy across multiple endpoints and time points without the need for multiplicity adjustments, effectively controlling Type I error while enhancing statistical power. It offers flexibility for various data distributions encountered in AD research and maximizes the utilization of longitudinal data. Simulations across realistic clinical trial scenarios, including those with conflicting treatment effects, and real-data applications demonstrate the LRST's performance, underscoring its potential as a valuable tool in AD clinical trials.

神经退行性疾病如阿尔茨海默病(AD)是一个重大的全球健康挑战,其特征是认知能力下降、功能障碍和其他衰弱效应。目前的阿尔茨海默病临床试验通常通过多个纵向主要终点来综合评价治疗效果。然而,传统方法可能无法捕捉到整体治疗效果,由于多重调整,需要更大的样本量,并且可能无法充分利用现有的纵向数据。为了解决这些限制,我们引入了纵向秩和检验(LRST),这是一种新的基于非参数秩的综合检验统计量。LRST能够在不需要多重调整的情况下对多个终点和时间点的治疗效果进行综合评估,有效地控制了I型误差,同时提高了统计能力。它为AD研究中遇到的各种数据分布提供了灵活性,并最大限度地利用了纵向数据。模拟现实的临床试验场景,包括那些治疗效果相互冲突的场景,以及实际数据应用证明了LRST的性能,强调了其作为AD临床试验中有价值的工具的潜力。
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引用次数: 0
Two-stage Adaptive Enrichment Designs with Survival Outcomes and Adjustment for Misclassification in Predictive Biomarkers. 具有生存结果的两阶段适应性富集设计和对预测性生物标志物错误分类的调整。
IF 1.3 4区 医学 Q3 MATHEMATICAL & COMPUTATIONAL BIOLOGY Pub Date : 2025-01-01 Epub Date: 2024-09-26 DOI: 10.1080/19466315.2024.2395408
Yanping Chen, Yong Lin, Shou-En Lu, Weichung Joe Shih, Hui Quan

Biomarker enrichment clinical trial designs are versatile tools to assess the treatment effect and increase the efficiency of clinical trials. In this paper, we propose a two-stage enrichment clinical trial design with survival outcomes, and consider the situation where the biomarker assay and classification are possibly subject to errors. Specifically, the first stage is a randomized design, stratified by the biomarker appeared status. Depending on the result of the interim analysis and a pre-specified futility criterion, the second stage can be either enriched with only the biomarker appeared positive patients, or remain as the stratified design with both biomarker appeared positive and biomarker appeared negative patients. Compared to continuous and binary outcomes, test statistics to account for biomarker misclassification are much more complicated and require special care. We develop log-rank statistics for the interim and final analyses, with an adjustment for the sensitivity and specificity of the biomarker assay. Control of Type I error rate is achieved by considering correlations between adjusted log-rank statistics from the same and/or different stages. R code is developed to calculate critical values, global/marginal power, and sample size. Our method is illustrated with examples of a recently successful development of immunotherapy in non-small-cell lung cancer.

生物标志物富集临床试验设计是评估治疗效果和提高临床试验效率的通用工具。在本文中,我们提出了一个具有生存结果的两阶段浓缩临床试验设计,并考虑了生物标志物测定和分类可能存在错误的情况。具体而言,第一阶段是随机设计,按生物标志物出现状态分层。根据中期分析的结果和预先指定的无效标准,第二阶段可以只增加生物标志物出现阳性的患者,或者仍然是生物标志物出现阳性和生物标志物出现阴性的分层设计。与连续和二元结果相比,用于解释生物标志物错误分类的测试统计要复杂得多,需要特别注意。我们为中期和最终分析开发了log-rank统计,并对生物标志物测定的敏感性和特异性进行了调整。通过考虑来自相同和/或不同阶段的调整后的log-rank统计数据之间的相关性,可以实现对第一类错误率的控制。R代码是用来计算临界值、全局/边际功率和样本量的。我们的方法以最近成功开发的非小细胞肺癌免疫疗法为例进行说明。
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引用次数: 0
Assessment of treatment effect heterogeneity for multiregional randomized clinical trials. 多地区随机临床试验治疗效果异质性评估。
IF 1.3 4区 医学 Q3 MATHEMATICAL & COMPUTATIONAL BIOLOGY Pub Date : 2025-01-01 Epub Date: 2024-12-20 DOI: 10.1080/19466315.2024.2421748
Haotian Zhuang, Xiaofei Wang, Stephen L George

Multiregional clinical trials (MRCTs) have become increasingly common in recent years. Detecting underlying regional heterogeneity is a critical issue for these trials. Existing methods for assessing treatment effect heterogeneity across regions have ignored the incomparability of baseline extrinsic risk factors of the randomized patients from different regions. In this paper, a calibration weighting method is proposed to calibrate the distribution of these extrinsic risk factors between multiple regions. We establish the consistency and the asymptotic normality of the calibration weighting estimator. Simulation studies confirm the finite sample properties of the proposed estimator as well as its superior performance over naive methods and the inverse probability weighting method. The proposed method is illustrated using a randomized clinical trial of adjuvant chemotherapy for resected non-small-cell lung cancer.

近年来,多区域临床试验(mrct)越来越普遍。检测潜在的区域异质性是这些试验的关键问题。现有的评估跨地区治疗效果异质性的方法忽略了来自不同地区随机患者的基线外部危险因素的不可比较性。本文提出了一种校正加权方法来校正这些外部危险因素在多个区域之间的分布。建立了校正加权估计量的相合性和渐近正态性。仿真研究证实了所提估计器的有限样本特性,以及其优于朴素方法和逆概率加权方法的性能。所提出的方法是用一项随机临床试验辅助化疗切除非小细胞肺癌。
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引用次数: 0
A Basket Trial Design Based on Power Priors 基于功率先验的篮式试验设计
IF 1.8 4区 医学 Q3 MATHEMATICAL & COMPUTATIONAL BIOLOGY Pub Date : 2024-09-10 DOI: 10.1080/19466315.2024.2402275
Lukas Baumann, Lukas D. Sauer, Meinhard Kieser
In basket trials a treatment is investigated in several subgroups. They are primarily used in oncology in early clinical phases as single-arm trials with a binary endpoint. For their analysis prima...
在篮子试验中,一种治疗方法要在多个亚组中进行研究。它们主要用于肿瘤学的早期临床阶段,作为二元终点的单臂试验。为了对其进行分析,首先需要对治疗方案进行分析。
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引用次数: 0
Remembering Gregory Campbell (1949-2023): An Accomplished Leader, Mentor, and Biostatistical Innovator 缅怀格雷戈里-坎贝尔(1949-2023):一位杰出的领导者、导师和生物统计创新者
IF 1.8 4区 医学 Q3 MATHEMATICAL & COMPUTATIONAL BIOLOGY Pub Date : 2024-08-22 DOI: 10.1080/19466315.2024.2395196
Gene Pennello, Freda Cooner, Telba Irony, Karen Bandeen-Roche, Shanti Gomatam, Thomas Gwise, Larry Kessler, Richard Kotz, Thomas Louis, Kristen Meier, Norberto Pantoja-Galicia, Nicholas Petrick, Estelle Russek-Cohen, Laura Thompson, Jingjing Ye, Lilly Yue
Published in Statistics in Biopharmaceutical Research (Just accepted, 2024)
发表于《生物制药研究统计》(刚刚接受,2024 年)
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引用次数: 0
Combining Recurrent and Terminal Events Into a Composite Endpoint May Be Problematic 将经常性事件和终结性事件合并为一个综合终点可能存在问题
IF 1.8 4区 医学 Q3 MATHEMATICAL & COMPUTATIONAL BIOLOGY Pub Date : 2024-08-21 DOI: 10.1080/19466315.2024.2395404
Xiaofei Liu, Norbert Benda, Clemens Mittmann, Armin Koch
In clinical trials for chronic heart failure (CHF), time to a composite of first hospitalization for worsening heart failure or death is a widely accepted primary efficacy measure. Motivated by low...
在慢性心力衰竭(CHF)的临床试验中,因心力衰竭恶化而首次住院或死亡的复合时间是公认的主要疗效指标。由于慢性心力衰竭(CHF)患者的...
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引用次数: 0
Simultaneous Confidence Intervals for Signal Detection and Ascertaining Precision of Adverse Event Rates in Clinical Trials 临床试验中信号检测和确定不良事件发生率精度的同步置信区间
IF 1.8 4区 医学 Q3 MATHEMATICAL & COMPUTATIONAL BIOLOGY Pub Date : 2024-08-05 DOI: 10.1080/19466315.2024.2388523
Guoqing Diao, Margaret Gamalo, Ram Tiwari
The marketing authorization of a medicinal product is contingent upon demonstration of safety and efficacy in support of the product’s labeled conditions of use. To demonstrate safety, one group of...
药品的上市许可取决于其安全性和有效性是否符合产品标注的使用条件。为了证明安全性,一组...
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引用次数: 0
Bayesian shrinkage estimation of credible subgroups for count data with excess zeros 对有多余零的计数数据的可信子群进行贝叶斯收缩估计
IF 1.8 4区 医学 Q3 MATHEMATICAL & COMPUTATIONAL BIOLOGY Pub Date : 2024-08-05 DOI: 10.1080/19466315.2024.2388520
Duy Ngo, Daniel Quartey, Patrick M Schnell, Richard Baumgartner, Shahrul Mt-Isa, Dai Feng
Heterogeneity of treatment effects due to heterogeneous patient characteristics often arises in clinical trials. Subgroup analysis and the analysis of interactions are the most common approaches fo...
临床试验中经常会出现因患者特征不同而导致的治疗效果异质性。亚组分析和交互作用分析是临床试验中最常用的方法。
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引用次数: 0
Statistics Post-Pandemic: Paving the Scientific Path to Treatments, Vaccines, and Diagnostics—Special Issue for the 2022 Regulatory-Industry Statistics Workshop 大流行后的统计:为治疗、疫苗和诊断铺平科学道路--2022 年监管机构-行业统计研讨会特刊
IF 1.8 4区 医学 Q3 MATHEMATICAL & COMPUTATIONAL BIOLOGY Pub Date : 2024-07-31 DOI: 10.1080/19466315.2024.2368367
Chia-Wen Ko, Hope B. Knuckles
Published in Statistics in Biopharmaceutical Research (Vol. 16, No. 3, 2024)
发表于《生物制药研究统计》(第 16 卷第 3 期,2024 年)
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引用次数: 0
期刊
Statistics in Biopharmaceutical Research
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