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Hybrid Computer Vision Model to Predict Lung Cancer in Diverse Populations. 预测不同人群肺癌的混合计算机视觉模型。
IF 2.8 Q2 ONCOLOGY Pub Date : 2026-03-01 Epub Date: 2026-03-19 DOI: 10.1200/CCI-25-00041
Abdul J Zakkar, Nazia Perwaiz, Vikram Harikrishnan, Weiheng Zhong, Vijeth Narra, Farah Yousef, Daniel Kim, Mason Burrage-Burton, Abdul Afeez Lawal, Vijayakrishna K Gadi, Mark C Korpics, Sage J Kim, Zhengjia Chen, Aly A Khan, Yamilé Molina, Yang Dai, G Elisabeta Marai, Hadi Meidani, Ryan H Nguyen, Ameen A Salahudeen

Purpose: Disparities in lung cancer incidence exist in Black populations, and screening criteria underserve Black populations due to disparately elevated risk in the screening-eligible population. Prediction models that integrate clinical and imaging-based features to individualize lung cancer risk are a potential means to mitigate these disparities.

Methods: This multicenter (National Lung Screening Trial [NLST]) and catchment population-based (University of Illinois Health [UIH], urban and suburban Cook County) cross-sectional study used participants at risk of lung cancer with available lung computed tomography (CT) imaging and follow-up between the years 2015 and 2024. In all, 53,452 in NLST and 11,654 in UIH were included on the basis of age and tobacco use-based risk factors for lung cancer. Cohorts were used for training and testing of deep and machine learning models using clinical features alone or combined with CT image features (hybrid computer vision).

Results: An optimized seven-feature clinical model achieved receiver operating characteristic (ROC)-AUC values ranging from 0.64 to 0.67 in NLST and 0.60 to 0.65 in UIH cohorts across multiple years. Incorporation of imaging features to form a hybrid computer vision model significantly improved ROC-AUC values to 0.78-0.91 in NLST but deteriorated in UIH with ROC-AUC values of 0.68-0.80, attributable to Black participants where ROC-AUC values ranged from 0.63 to 0.72 across multiple years. Retraining the hybrid computer vision model by incorporating Black and other participants from the UIH cohort improved performance with ROC-AUC values of 0.70-0.87 in a held-out UIH test set.

Conclusion: Hybrid computer vision predicted risk with improved accuracy compared with clinical risk models alone. However, potential biases in image training data reduced model generalizability in Black participants. Performance was improved upon retraining with a subset of the UIH cohort, suggesting that inclusive training and validation data sets can minimize racial disparities. Future studies incorporating vision models trained on representative data sets may demonstrate improved health equity upon clinical use.

目的:黑人人群中肺癌发病率存在差异,筛查标准对黑人人群的服务不足,因为在符合筛查条件的人群中存在不同的风险升高。结合临床和影像学特征来个性化肺癌风险的预测模型是缓解这些差异的潜在手段。方法:这项多中心(国家肺部筛查试验[NLST])和以集水区人群为基础(伊利诺伊大学健康中心[UIH],城市和郊区库克县)的横断面研究使用了2015年至2024年间可用的肺部计算机断层扫描(CT)成像和随访的肺癌风险参与者。根据年龄和烟草使用为基础的肺癌危险因素,NLST中的53,452例和uh中的11,654例被纳入。队列用于单独使用临床特征或结合CT图像特征(混合计算机视觉)的深度和机器学习模型的训练和测试。结果:经过优化的七特征临床模型的受试者工作特征(ROC)-AUC值在NLST中为0.64 - 0.67,在uh队列中为0.60 - 0.65。结合成像特征形成混合计算机视觉模型显著提高NLST的ROC-AUC值至0.78-0.91,但uh的ROC-AUC值恶化至0.68-0.80,这归因于黑人参与者的ROC-AUC值在多年间从0.63到0.72不等。通过将Black和来自UIH队列的其他参与者纳入进来,对混合计算机视觉模型进行再训练,在一个固定的UIH测试集中,ROC-AUC值为0.70-0.87,提高了性能。结论:与单独的临床风险模型相比,混合计算机视觉预测风险的准确性更高。然而,图像训练数据中的潜在偏差降低了黑人参与者的模型泛化性。在对uh队列的一个子集进行再培训后,表现得到了改善,这表明包容性培训和验证数据集可以最大限度地减少种族差异。未来的研究将纳入在代表性数据集上训练的视觉模型,可能会证明在临床使用时改善了健康公平性。
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引用次数: 0
Mitigating Algorithmic Bias in Cancer Site Classification Models. 减轻癌症部位分类模型中的算法偏差。
IF 2.8 Q2 ONCOLOGY Pub Date : 2026-03-01 Epub Date: 2026-03-11 DOI: 10.1200/CCI-25-00250
Abhishek Shivanna, Adam Spannaus, Jordan Tschida, John Gounley, Patrycja Krawczuk, Heidi Hanson

Purpose: Integrating artificial intelligence in cancer diagnostics has improved tumor classification beyond rule-based systems. Despite these advancements, these models may still encode demographic biases. We conducted a large-scale, applied bias-probing study of a deep learning-based cancer site classifier to quantify race information encoded in document embeddings. We then evaluated how performance changes when race-correlated embedding dimensions are removed in a post-training sensitivity analysis.

Methods: The cancer site classifier was trained using 3.5 million electronic cancer pathology reports from six of the National Cancer Institute's SEER registries. We trained a hierarchical self-attention network to generate 400-dimensional document embeddings. These embeddings were used to train two downstream, gradient-boosted decision tree classifiers: one to classify the cancer sites and another to predict racial categories. We identified overlapping features by intersecting the top 50 feature-importance rankings from the site and race models and computed their cumulative feature importance in each model. As a post hoc sensitivity analysis, we progressively pruned these overlapping dimensions, retrained the site model, and compared overall macro-F1 and accuracy, race-stratified macro-F1, and group fairness metrics on the basis of demographic parity and equalized odds before and after pruning.

Results: The analysis revealed minimal feature overlap between the cancer site and race prediction models, and the cumulative importance scores indicated a negligible influence of racial information on clinical predictions. Post-training pruning of overlapping features did not compromise the models' diagnostic accuracy, with a 0.07% loss in accuracy.

Conclusion: Our findings demonstrate that HiSAN-generated embeddings from SEER data can be used effectively in cancer site classification without significant demographic bias influencing the outcomes. Post-training pruning therefore functions as a practical audit and sensitivity check.

目的:将人工智能集成到癌症诊断中,使肿瘤分类超越了基于规则的系统。尽管取得了这些进步,但这些模型可能仍然存在人口统计学偏差。我们对基于深度学习的癌症部位分类器进行了大规模的应用偏差探测研究,以量化文档嵌入中编码的种族信息。然后,我们评估了在训练后敏感性分析中去除种族相关嵌入维度时性能的变化。方法:使用来自6个国家癌症研究所SEER登记处的350万份电子癌症病理报告来训练癌症部位分类器。我们训练了一个分层自关注网络来生成400维文档嵌入。这些嵌入被用来训练两个下游的梯度增强决策树分类器:一个用于对癌症部位进行分类,另一个用于预测种族类别。我们通过交叉来自站点和种族模型的前50个特征重要性排名来识别重叠特征,并计算它们在每个模型中的累积特征重要性。作为事后敏感性分析,我们逐步修剪了这些重叠的维度,重新训练了站点模型,并比较了总体宏观f1和准确性、种族分层宏观f1和群体公平指标,这些指标基于人口平价和修剪前后的均衡赔率。结果:分析显示癌症部位和种族预测模型之间的特征重叠最小,累积重要性评分表明种族信息对临床预测的影响可以忽略不计。训练后重叠特征的修剪不会影响模型的诊断准确性,准确性损失为0.07%。结论:我们的研究结果表明,hisan从SEER数据中生成的嵌入可以有效地用于癌症部位分类,而不会影响结果的显著人口统计学偏差。因此,培训后剪枝作为一种实用的审计和敏感性检查。
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引用次数: 0
Leveraging Artificial Intelligence for Immune Checkpoint Inhibitor Safety: A Scoping Review of Current Applications. 利用人工智能免疫检查点抑制剂的安全性:当前应用的范围审查。
IF 2.8 Q2 ONCOLOGY Pub Date : 2026-03-01 Epub Date: 2026-03-09 DOI: 10.1200/CCI-25-00323
Chin Hang Yiu, Edward C Y Lau, Charlotte Thuy Tien Le, Christine Y Lu

Purpose: To systematically map how artificial intelligence (AI) is being applied to immune-related adverse events (irAEs) induced by immune checkpoint inhibitors (ICIs), and to identify key knowledge gaps and future directions to responsible implementation.

Methods: We conducted a scoping review in accordance with the Preferred Reporting Items for Systematic Reviews and Meta-Analyses extension for Scoping Reviews (PRISMA-ScR) guideline. MEDLINE (Ovid), Embase, and Scopus were searched from January 1, 2015, to August 24, 2025. Eligible studies applied at least one AI method (eg, machine learning, natural language processing) to investigate irAEs. Studies were grouped into three clinical domains: (1) risk prediction, (2) identification/detection, and (3) clinical information/decision support. Data were synthesized narratively and mapped descriptively.

Results: 40 studies met inclusion criteria, encompassing 45,897 ICI-treated patients. Most applied AI for risk prediction (n = 27), followed by identification/detection (n = 10) and decision support (n = 3). AI approaches showed promise in detecting irAEs from structured and unstructured data, stratifying patient-level risk, and supporting clinical decision making. However, methodological limitations were common: most studies used retrospective data and lacked external validation, limiting clinical applicability.

Conclusion: AI shows potential to enhance ICI safety by enabling earlier detection of irAEs, personalized risk prediction, and scalable clinical support tools. To support clinical translation, future research must prioritize external and prospective validation, standardized outcome reporting, and impact evaluation (eg, effects on clinical outcomes and workflows) within robust governance frameworks.

目的:系统地绘制人工智能(AI)如何应用于免疫检查点抑制剂(ICIs)诱导的免疫相关不良事件(irAEs),并确定关键的知识空白和未来负责任实施的方向。方法:我们按照系统评价和荟萃分析扩展范围评价的首选报告项目(PRISMA-ScR)指南进行了范围评价。检索时间为2015年1月1日至2025年8月24日的MEDLINE (Ovid)、Embase和Scopus。符合条件的研究应用了至少一种人工智能方法(例如,机器学习,自然语言处理)来调查AI。研究分为三个临床领域:(1)风险预测,(2)识别/检测,(3)临床信息/决策支持。数据以叙述的方式合成,并以描述的方式映射。结果:40项研究符合纳入标准,共纳入45897例ci治疗患者。人工智能应用最多的是风险预测(n = 27),其次是识别/检测(n = 10)和决策支持(n = 3)。人工智能方法有望从结构化和非结构化数据中检测出irae,对患者级别的风险进行分层,并支持临床决策。然而,方法上的局限性是常见的:大多数研究使用回顾性数据,缺乏外部验证,限制了临床适用性。结论:人工智能通过早期检测irae、个性化风险预测和可扩展的临床支持工具,显示出增强ICI安全性的潜力。为了支持临床转化,未来的研究必须在健全的治理框架内优先考虑外部和前瞻性验证、标准化的结果报告和影响评估(例如,对临床结果和工作流程的影响)。
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引用次数: 0
Automated Tumor International Classification of Diseases Coding of Real-World Pathology Reports Using Self-Hosted Large Language Models. 使用自托管的大型语言模型对真实世界病理报告进行编码的自动肿瘤国际疾病分类。
IF 2.8 Q2 ONCOLOGY Pub Date : 2026-03-01 Epub Date: 2026-03-11 DOI: 10.1200/CCI-25-00254
Kamyar Arzideh, René Hosch, Amin Turki, Bahadir Eryilmaz, Mikel Bahn, Henning Schäfer, Ahmad Idrissi-Yaghir, Sameh Khattab, Amin Dada, Hideo A Baba, Dirk Schadendorf, Martin Schuler, Jens Kleesiek, Sylvia Hartmann, Felix Nensa, Julius Keyl

Purpose: Manual coding of pathology reports with International Classification of Diseases for Oncology (ICD-O)-3 codes is time-consuming, error-prone, and resource-intensive for health care institutions. To evaluate the performance of multiple state-of-the-art large language models (LLMs) in extracting ICD-O-3 topography and morphology codes from real-world pathology reports and assess their potential for clinical implementation, this study compares the performance of state-of-the-art open-source models in multiple evaluation setups.

Methods: We analyzed 21,364 pathology reports from 10,823 patients documented between 2013 and 2025 at a large German hospital. Five LLMs were evaluated: Llama-3.3-70B-Instruct, DeepSeek-R1-Distill-Llama (8B and 70B variants), Qwen3-235B-A22B, and Gemma-3-12B-it. All models were deployed on secured private information technology hospital infrastructure. Three different prompts were developed for topography extraction (with and without anatomic context) and morphology extraction. Performance was evaluated using exact code matches and first three-position matches.

Results: For exact ICD-O topography code prediction, Qwen3-235B-A22B achieved the highest performance (microaverage F1: 71.6%), whereas Llama-3.3-70B-Instruct performed best at predicting the first three characters (micro-average F1: 84.6%). For morphology codes, DeepSeek-R1-Distill-Llama-70B outperformed other models (exact microaverage F1: 34.7%; first three characters' microaverage F1: 77.8%). Large disparities between micro- and macroaverage F1-scores indicated poor generalization to rare conditions.

Conclusion: Although LLMs demonstrate promising capabilities as support systems for expert-guided pathology coding, their performance is not yet sufficient for fully automated, unsupervised use in routine clinical workflows. LLMs showed poor performance on rare conditions, heavy dependence on contextual information, and substantially lower scores for morphology versus topography classification.

目的:用国际肿瘤疾病分类(ICD-O)-3代码对病理报告进行手工编码对卫生保健机构来说耗时、容易出错且资源密集。为了评估多个最先进的大型语言模型(LLMs)从现实世界的病理报告中提取ICD-O-3地形和形态代码的性能,并评估其临床应用的潜力,本研究比较了多个评估设置中最先进的开源模型的性能。方法:我们分析了2013年至2025年在德国一家大型医院记录的10,823例患者的21,364份病理报告。评估了五种llm: Llama-3.3-70B-Instruct, DeepSeek-R1-Distill-Llama (8B和70B变体),Qwen3-235B-A22B和Gemma-3-12B-it。所有模型都部署在安全的私营信息技术医院基础设施上。开发了三种不同的提示,用于地形提取(有或没有解剖背景)和形态提取。使用精确的代码匹配和前三个位置匹配来评估性能。结果:在准确预测ICD-O地形码时,Qwen3-235B-A22B的微平均F1为71.6%,而Llama-3.3-70B-Instruct的前3个性状的微平均F1为84.6%。对于形态学编码,DeepSeek-R1-Distill-Llama-70B优于其他模型(精确微平均F1: 34.7%;前三个字符微平均F1: 77.8%)。微观和宏观平均f1分数之间的巨大差异表明对罕见情况的泛化能力差。结论:尽管llm作为专家指导的病理编码支持系统表现出了良好的能力,但它们的性能还不足以在常规临床工作流程中实现全自动、无监督的使用。llm在罕见条件下表现不佳,严重依赖上下文信息,并且在形态学和地形分类方面得分明显较低。
{"title":"Automated Tumor International Classification of Diseases Coding of Real-World Pathology Reports Using Self-Hosted Large Language Models.","authors":"Kamyar Arzideh, René Hosch, Amin Turki, Bahadir Eryilmaz, Mikel Bahn, Henning Schäfer, Ahmad Idrissi-Yaghir, Sameh Khattab, Amin Dada, Hideo A Baba, Dirk Schadendorf, Martin Schuler, Jens Kleesiek, Sylvia Hartmann, Felix Nensa, Julius Keyl","doi":"10.1200/CCI-25-00254","DOIUrl":"https://doi.org/10.1200/CCI-25-00254","url":null,"abstract":"<p><strong>Purpose: </strong>Manual coding of pathology reports with International Classification of Diseases for Oncology (ICD-O)-3 codes is time-consuming, error-prone, and resource-intensive for health care institutions. To evaluate the performance of multiple state-of-the-art large language models (LLMs) in extracting ICD-O-3 topography and morphology codes from real-world pathology reports and assess their potential for clinical implementation, this study compares the performance of state-of-the-art open-source models in multiple evaluation setups.</p><p><strong>Methods: </strong>We analyzed 21,364 pathology reports from 10,823 patients documented between 2013 and 2025 at a large German hospital. Five LLMs were evaluated: Llama-3.3-70B-Instruct, DeepSeek-R1-Distill-Llama (8B and 70B variants), Qwen3-235B-A22B, and Gemma-3-12B-it. All models were deployed on secured private information technology hospital infrastructure. Three different prompts were developed for topography extraction (with and without anatomic context) and morphology extraction. Performance was evaluated using exact code matches and first three-position matches.</p><p><strong>Results: </strong>For exact ICD-O topography code prediction, Qwen3-235B-A22B achieved the highest performance (microaverage F1: 71.6%), whereas <i>Llama-3.3-70B-Instruct</i> performed best at predicting the first three characters (micro-average F1: 84.6%). For morphology codes, <i>DeepSeek-R1-Distill-Llama-70B</i> outperformed other models (exact microaverage F1: 34.7%; first three characters' microaverage F1: 77.8%). Large disparities between micro- and macroaverage F1-scores indicated poor generalization to rare conditions.</p><p><strong>Conclusion: </strong>Although LLMs demonstrate promising capabilities as support systems for expert-guided pathology coding, their performance is not yet sufficient for fully automated, unsupervised use in routine clinical workflows. LLMs showed poor performance on rare conditions, heavy dependence on contextual information, and substantially lower scores for morphology versus topography classification.</p>","PeriodicalId":51626,"journal":{"name":"JCO Clinical Cancer Informatics","volume":"10 ","pages":"e2500254"},"PeriodicalIF":2.8,"publicationDate":"2026-03-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"147437445","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Large Language Models in Oncology: Navigating Promise and Prudence in a Rapidly Evolving Landscape. 肿瘤学中的大型语言模型:在快速发展的环境中导航承诺和谨慎。
IF 2.8 Q2 ONCOLOGY Pub Date : 2026-03-01 Epub Date: 2026-03-10 DOI: 10.1200/CCI-26-00019
Irbaz Bin Riaz
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引用次数: 0
Building Capacity for Research on Cancer, Older Adults, and Under-Represented Populations: Methods and Lessons Learned From the Development of the University of Maryland Marlene and Stewart Greenebaum Comprehensive Cancer Center-Medicare Database. 癌症、老年人和代表性不足人群的研究能力建设:马里兰大学Marlene和Stewart Greenebaum综合癌症中心-医疗保险数据库开发的方法和经验教训。
IF 2.8 Q2 ONCOLOGY Pub Date : 2026-03-01 Epub Date: 2026-03-18 DOI: 10.1200/CCI-25-00276
Tsung-Ying Lee, Eberechukwu Onukwugha, Abree Johnson, Chih Chun Tung, Jessica Dohler, Bindu Kanapuru, Catherine C Lerro, Eun-Shim Nahm, Colleen Reilly, Donna R Rivera, Jonathan Vallejo, Felice Yang, Jessica Wimbush, Joanne F Dorgan

Purpose: This study assessed the feasibility of developing the University of Maryland Marlene and Stewart Greenebaum Comprehensive Cancer Center (UMGCCC)-Medicare-linked database infrastructure by integrating tumor registry, electronic health records (EHRs), and Medicare administrative claims data. The database was designed to support research identifying determinants of differences in cancer outcomes among patient populations commonly under-represented in clinical trials (based on the US population with the disease) including older adults.

Methods: Patients 65 years and older who were diagnosed and/or received their first course of treatment for a primary tumor at UMGCCC from 2018 to 2021 were included in the database. A two-stage data linkage process was used to merge cancer center tumor registry data with EHR and Medicare claims data. We performed data quality and linkage quality checks. Summary statistics were calculated for patient and tumor characteristics.

Results: Of the 3,322 patients identified from the tumor registry, 3,119 patients (94%) were included in the UMGCCC-Medicare database (mean age 73.1 years, 56% male, 31% Black). Lung cancers were the most common (15%) followed by oral cancers (12%) and non-Hodgkin lymphoma (6%).

Conclusion: The development of the UMGCCC-Medicare database serves as proof of concept for linking real-world data from different sources. The database is a valuable resource for research requiring detailed patient-level data and follow-up that may generate real-world evidence for older adults living in the United States and treated in routine oncology practice.

目的:本研究通过整合肿瘤登记、电子健康记录(EHRs)和医疗保险行政索赔数据,评估开发马里兰大学Marlene and Stewart Greenebaum综合癌症中心(UMGCCC)与医疗保险相关的数据库基础设施的可行性。该数据库旨在支持研究确定在临床试验中通常代表性不足的患者群体(基于美国患有该疾病的人群)中癌症结局差异的决定因素,包括老年人。方法:将2018年至2021年在UMGCCC诊断和/或接受第一疗程原发肿瘤治疗的65岁及以上患者纳入数据库。一个两阶段的数据链接过程用于合并癌症中心肿瘤登记数据与电子病历和医疗保险索赔数据。我们进行了数据质量和链接质量检查。对患者及肿瘤特征进行汇总统计。结果:在从肿瘤登记处确定的3322例患者中,有3119例(94%)患者被纳入UMGCCC-Medicare数据库(平均年龄73.1岁,56%男性,31%黑人)。肺癌是最常见的(15%),其次是口腔癌(12%)和非霍奇金淋巴瘤(6%)。结论:umgcc - medicare数据库的开发为连接来自不同来源的真实世界数据的概念提供了证明。该数据库对于需要详细的患者水平数据和随访的研究来说是一个宝贵的资源,可以为生活在美国并在常规肿瘤实践中治疗的老年人提供真实世界的证据。
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引用次数: 0
Exploring the Past and Current Landscape of Biomarker-Driven Clinical Trials Through Large Language Models. 通过大型语言模型探索生物标志物驱动的临床试验的过去和现在的景观。
IF 2.8 Q2 ONCOLOGY Pub Date : 2026-02-01 Epub Date: 2026-02-03 DOI: 10.1200/CCI-25-00028
Margaret Guo, Evan Passalacqua, Erik Bao, Brenda Miao, Atul Butte, Travis Zack

Purpose: Biomarkers, or specific somatic alterations, are increasingly required for clinical trial eligibility. Finding and enrolling patients with these biomarkers is essential not only for continuous progress in the treatment of disease but also for democratizing clinical trial participation. Here, we use data from the National Cancer Institute Clinical Trials Reporting Program (NCI CTRP), combined with large language model applications, to survey the current landscape of cancer clinical trials.

Methods: We extracted 20,894 trials from Cancer.gov from the application programming interface (API) of the NCI CTRP. We quantified biomarker rates in cancer subtypes, described the geographic distribution of trial sites, and identified failure causes for these trials. Finally, we built an application from this API to match patients with clinical trials.

Results: We showed that 5,044 of the 20,894 interventional clinical trials contained biomarker eligibility data and trials tended to cluster around large academic centers and cities. We identified 630 biomarkers in 36 cancer subtypes and show that most biomarkers are used as eligibility criteria for multiple cancer subtypes. We highlight that the difficulties with accrual and sponsorship were the most common reason for discontinuing clinical trials. Finally, we demonstrate a novel method to automatically match natural language queries with eligible clinical trials, NCI Clinical Trials Navigator.

Conclusion: A survey of our clinical genomics showed that many individuals likely have mutations that would make them eligible for biomarker-driven trials. We used the NCI Clinical Trials database to show that the distribution of biomarker trials across the United States limits access for many patients and likely leads to the frequent trial termination because of inadequate accrual. Finally, we built an automated publicly available tool that can improve patient-to-trial biomarker-based matching.

目的:生物标志物,或特定的体细胞改变,越来越需要临床试验资格。寻找和招募具有这些生物标志物的患者不仅对疾病治疗的持续进展至关重要,而且对临床试验参与的民主化也至关重要。在这里,我们使用来自国家癌症研究所临床试验报告计划(NCI CTRP)的数据,结合大型语言模型应用程序,来调查癌症临床试验的现状。方法:我们从NCI CTRP的应用程序编程接口(API)中提取Cancer.gov上的20,894项试验。我们量化了癌症亚型的生物标志物率,描述了试验地点的地理分布,并确定了这些试验失败的原因。最后,我们从这个API构建了一个应用程序,将患者与临床试验相匹配。结果:我们发现20,894项介入临床试验中有5,044项包含生物标志物合格性数据,并且试验倾向于集中在大型学术中心和城市周围。我们在36种癌症亚型中鉴定了630种生物标志物,并表明大多数生物标志物可作为多种癌症亚型的合格标准。我们强调,应计和赞助的困难是终止临床试验的最常见原因。最后,我们展示了一种新的方法来自动匹配自然语言查询与符合条件的临床试验,NCI临床试验导航。结论:我们的临床基因组学调查显示,许多个体可能有突变,这将使他们有资格进行生物标志物驱动的试验。我们使用NCI临床试验数据库显示,生物标志物试验在美国的分布限制了许多患者的可及性,并可能由于累积不足而导致频繁的试验终止。最后,我们建立了一个自动化的公开工具,可以改善患者对试验生物标志物的匹配。
{"title":"Exploring the Past and Current Landscape of Biomarker-Driven Clinical Trials Through Large Language Models.","authors":"Margaret Guo, Evan Passalacqua, Erik Bao, Brenda Miao, Atul Butte, Travis Zack","doi":"10.1200/CCI-25-00028","DOIUrl":"10.1200/CCI-25-00028","url":null,"abstract":"<p><strong>Purpose: </strong>Biomarkers, or specific somatic alterations, are increasingly required for clinical trial eligibility. Finding and enrolling patients with these biomarkers is essential not only for continuous progress in the treatment of disease but also for democratizing clinical trial participation. Here, we use data from the National Cancer Institute Clinical Trials Reporting Program (NCI CTRP), combined with large language model applications, to survey the current landscape of cancer clinical trials.</p><p><strong>Methods: </strong>We extracted 20,894 trials from Cancer.gov from the application programming interface (API) of the NCI CTRP. We quantified biomarker rates in cancer subtypes, described the geographic distribution of trial sites, and identified failure causes for these trials. Finally, we built an application from this API to match patients with clinical trials.</p><p><strong>Results: </strong>We showed that 5,044 of the 20,894 interventional clinical trials contained biomarker eligibility data and trials tended to cluster around large academic centers and cities. We identified 630 biomarkers in 36 cancer subtypes and show that most biomarkers are used as eligibility criteria for multiple cancer subtypes. We highlight that the difficulties with accrual and sponsorship were the most common reason for discontinuing clinical trials. Finally, we demonstrate a novel method to automatically match natural language queries with eligible clinical trials, NCI Clinical Trials Navigator.</p><p><strong>Conclusion: </strong>A survey of our clinical genomics showed that many individuals likely have mutations that would make them eligible for biomarker-driven trials. We used the NCI Clinical Trials database to show that the distribution of biomarker trials across the United States limits access for many patients and likely leads to the frequent trial termination because of inadequate accrual. Finally, we built an automated publicly available tool that can improve patient-to-trial biomarker-based matching.</p>","PeriodicalId":51626,"journal":{"name":"JCO Clinical Cancer Informatics","volume":"10 ","pages":"e2500028"},"PeriodicalIF":2.8,"publicationDate":"2026-02-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12871862/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146114969","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Health Care Worker Perspectives After New Electronic Health Record Implementation in an Oncology Ambulatory Clinic: Qualitative and Quality-Improvement Insights. 在肿瘤门诊实施新的电子健康记录后的卫生保健工作者的观点:定性和质量改进的见解。
IF 2.8 Q2 ONCOLOGY Pub Date : 2026-02-01 Epub Date: 2026-02-05 DOI: 10.1200/CCI-25-00322
Luxiga Thanabalachandran, Khaled Zaza, Renee Hartzell, Kimberley Miller, Geneviève C Digby, Taylor Moffat, Melinda Mushonga, Kristin Wright, Melanie Powis, John Drover, Siddhartha Srivastava, Monika K Krzyzanowska, Yuchen Li

Purpose: Electronic health record (EHR) systems aim to improve efficiency, care coordination, and patient safety, yet implementation often introduces workflow challenges and staff burden. In 2024, the Cancer Centre of Southeastern Ontario (CCSEO), a regional academic cancer center in Canada, transitioned from a hybrid paper-electronic system to a fully integrated regional EHR. Although hospital EHR adoption has been studied, limited research has examined its impact within ambulatory oncology care, particularly among nonphysician staff, or how institutions responded to the findings. Our study explored oncology healthcare worker perspectives on EHR implementation at CCSEO and identified resulting quality-improvement (QI) initiatives.

Methods: Using purposeful maximum variation sampling, we recruited clinical, administrative, and research staff. Semistructured interviews explored workflow efficiency, documentation burden, staff wellness, patient safety, communication, and training. Data were audio-recorded, transcribed, and analyzed thematically using MAXQDA.

Results: Nineteen interviews were conducted until thematic saturation. Three major themes emerged. (1) Efficiency and workflow: Staff valued consolidated records and regional connectivity but reported navigation complexity, time burden, duplicate orders, reliance on multiple programs, and frequent workarounds. (2) Staff and patient wellness: Staff noted limited training, increased workload, cognitive overload, and reliance on peer support contributed to burnout. (3) Patient safety: Identified risks included order and medication errors, communication breakdowns, poor system visualization, imaging delays, and wristband or labeling issues. Several QI initiatives were implemented in response, including education and navigation rounds, formation of working groups, and integration of artificial intelligence.

Conclusion: EHR implementation introduced both benefits and challenges in oncology workflows. Findings informed multidisciplinary QI initiatives targeting role-specific training, workflow optimization, and safety, offering a framework for other cancer centers transitioning to new EHR systems.

目的:电子健康记录(EHR)系统旨在提高效率、护理协调和患者安全,但实施通常会带来工作流程挑战和工作人员负担。2024年,安大略省东南部癌症中心(CCSEO),加拿大的一个区域性学术癌症中心,从混合纸张电子系统过渡到完全集成的区域性电子健康档案。虽然已经对医院电子病历的采用进行了研究,但有限的研究已经检查了它对门诊肿瘤护理的影响,特别是对非医生工作人员的影响,或者机构如何回应研究结果。我们的研究探讨了肿瘤医护人员对CCSEO实施电子病历的看法,并确定了由此产生的质量改进(QI)举措。方法:采用有目的的最大变异抽样,我们招募了临床、行政和研究人员。半结构化访谈探讨了工作流程效率、文档负担、员工健康、患者安全、沟通和培训。使用MAXQDA对数据进行录音、转录和主题分析。结果:进行了19次访谈,直到主题饱和。出现了三个主要主题。(1)效率和工作流程:员工重视统一记录和区域连通性,但报告导航复杂性、时间负担、重复订单、依赖多个程序以及频繁的解决方案。(2)员工和患者健康:员工指出,培训有限、工作量增加、认知超载以及对同伴支持的依赖是导致倦怠的原因。(3)患者安全:已确定的风险包括医嘱和用药错误、沟通中断、系统可视化不良、成像延迟以及腕带或标签问题。作为回应,实施了几项全民智能倡议,包括教育和导航轮、工作组的组建以及人工智能的整合。结论:电子健康档案的实施给肿瘤学工作流程带来了好处和挑战。研究结果为针对特定角色培训、工作流程优化和安全性的多学科QI倡议提供了信息,为其他癌症中心过渡到新的电子健康档案系统提供了框架。
{"title":"Health Care Worker Perspectives After New Electronic Health Record Implementation in an Oncology Ambulatory Clinic: Qualitative and Quality-Improvement Insights.","authors":"Luxiga Thanabalachandran, Khaled Zaza, Renee Hartzell, Kimberley Miller, Geneviève C Digby, Taylor Moffat, Melinda Mushonga, Kristin Wright, Melanie Powis, John Drover, Siddhartha Srivastava, Monika K Krzyzanowska, Yuchen Li","doi":"10.1200/CCI-25-00322","DOIUrl":"https://doi.org/10.1200/CCI-25-00322","url":null,"abstract":"<p><strong>Purpose: </strong>Electronic health record (EHR) systems aim to improve efficiency, care coordination, and patient safety, yet implementation often introduces workflow challenges and staff burden. In 2024, the Cancer Centre of Southeastern Ontario (CCSEO), a regional academic cancer center in Canada, transitioned from a hybrid paper-electronic system to a fully integrated regional EHR. Although hospital EHR adoption has been studied, limited research has examined its impact within ambulatory oncology care, particularly among nonphysician staff, or how institutions responded to the findings. Our study explored oncology healthcare worker perspectives on EHR implementation at CCSEO and identified resulting quality-improvement (QI) initiatives.</p><p><strong>Methods: </strong>Using purposeful maximum variation sampling, we recruited clinical, administrative, and research staff. Semistructured interviews explored workflow efficiency, documentation burden, staff wellness, patient safety, communication, and training. Data were audio-recorded, transcribed, and analyzed thematically using MAXQDA.</p><p><strong>Results: </strong>Nineteen interviews were conducted until thematic saturation. Three major themes emerged. (1) Efficiency and workflow: Staff valued consolidated records and regional connectivity but reported navigation complexity, time burden, duplicate orders, reliance on multiple programs, and frequent workarounds. (2) Staff and patient wellness: Staff noted limited training, increased workload, cognitive overload, and reliance on peer support contributed to burnout. (3) Patient safety: Identified risks included order and medication errors, communication breakdowns, poor system visualization, imaging delays, and wristband or labeling issues. Several QI initiatives were implemented in response, including education and navigation rounds, formation of working groups, and integration of artificial intelligence.</p><p><strong>Conclusion: </strong>EHR implementation introduced both benefits and challenges in oncology workflows. Findings informed multidisciplinary QI initiatives targeting role-specific training, workflow optimization, and safety, offering a framework for other cancer centers transitioning to new EHR systems.</p>","PeriodicalId":51626,"journal":{"name":"JCO Clinical Cancer Informatics","volume":"10 ","pages":"e2500322"},"PeriodicalIF":2.8,"publicationDate":"2026-02-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146127255","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
SNF-CLIMEDIN: A Randomized Trial of Digital Support and Intervention in Patients With Advanced Non-Small Cell Lung Cancer. A Hellenic Cooperative Oncology Group Study. SNF-CLIMEDIN:一项晚期非小细胞肺癌患者数字支持和干预的随机试验希腊合作肿瘤小组研究。
IF 2.8 Q2 ONCOLOGY Pub Date : 2026-02-01 Epub Date: 2026-02-03 DOI: 10.1200/CCI-25-00234
Paris A Kosmidis, Thanos Kosmidis, Kyriaki Papadopoulou, Nikolaos Korfiatis, Athanasios Vozikis, Sofia Lampaki, Panagiota Economopoulou, Elena Fountzilas, Athina Christopoulou, Epaminondas Samantas, Anastasios Vagionas, Giannis Socrates Mountzios, Georgios Goumas, Nikolaos Tsoukalas, Ilias Athanasiadis, Dimitris Bafaloukos, Chris Panopoulos, Margarita Ioanna Koufaki, George Fountzilas, Georgios Petrakis, Helena Linardou

Purpose: This trial aims to investigate the effectiveness of online digital intervention in patients with non-small cell lung cancer (NSCLC) in terms of adverse events (AEs) and quality of life (QoL).

Methods: This randomized trial recruited 200 patients with advanced NSCLC (March 2022-October 2023). All patients received standard-of-care precise treatment, predominantly immunochemotherapy. The study was designed to assess AEs and QoL improvement. Through the CareAcross online platform, all patients received information about their disease and treatment and reported any of the 22 predefined AEs at any time. Patients were randomly assigned 1:1 in the intervention (A) and control (B) arm; patients in arm A automatically received, additionally, evidence-based guidance for the reported AEs. EuroQol 5-dimension 5-level responses were collected at baseline and at each treatment cycle. Resulting scores were compared between baseline and after the sixth cycle. In addition, patient case-level hospitalization data were collected and costs were estimated based on reimbursed costs as defined by the Ministry of Health, enabling a post hoc analysis.

Results: Clinical characteristics were well-balanced. More AEs were reported by patients online versus to their clinicians (P < .01). Among the 22 AEs, 17 improved more in arm A, with the improvement in rash and stomatitis being statistically significant. In QoL, there was no improvement in any of the five EuroQol 5-Dimension dimensions. Digital intervention was cost-saving with lower mean costs for hospitalization (P < .001). Overall response rate, progression-free survival, and overall survival were not statistically different between the two arms, ensuring comparable clinical outcome.

Conclusion: Digital oncology tends to improve selected AEs and is cost saving. Patients report, digitally, more informative AEs. Digital oncology can be a complementary tool to the oncology team and warrants further exploration.

目的:本试验旨在探讨在线数字干预在非小细胞肺癌(NSCLC)患者不良事件(ae)和生活质量(QoL)方面的有效性。方法:该随机试验招募了200例晚期NSCLC患者(2022年3月至2023年10月)。所有患者都接受了标准的精确治疗,主要是免疫化疗。该研究旨在评估ae和QoL的改善。通过CareAcross在线平台,所有患者都可以获得有关其疾病和治疗的信息,并随时报告22个预定义ae中的任何一个。患者按1:1随机分配到干预组(A)和对照组(B);另外,A组的患者自动接受报告ae的循证指导。在基线和每个治疗周期收集EuroQol 5维5级反应。结果得分在基线和第六个周期后进行比较。此外,还收集了患者病例级住院数据,并根据卫生部确定的报销费用估算了费用,以便进行事后分析。结果:临床特征平衡良好。患者在线报告的不良事件多于向临床医生报告的不良事件(P < 0.01)。在22例ae中,A组有17例改善较多,其中皮疹和口炎的改善有统计学意义。在生活质量方面,5个EuroQol 5-Dimension维度中的任何一个都没有改善。数字干预节约成本,平均住院费用较低(P < 0.001)。两组的总有效率、无进展生存期和总生存期无统计学差异,确保了可比较的临床结果。结论:数字肿瘤学倾向于改善选定的ae,节省成本。患者报告,数字化,更翔实的ae。数字肿瘤学可以成为肿瘤学团队的补充工具,值得进一步探索。
{"title":"SNF-CLIMEDIN: A Randomized Trial of Digital Support and Intervention in Patients With Advanced Non-Small Cell Lung Cancer. A Hellenic Cooperative Oncology Group Study.","authors":"Paris A Kosmidis, Thanos Kosmidis, Kyriaki Papadopoulou, Nikolaos Korfiatis, Athanasios Vozikis, Sofia Lampaki, Panagiota Economopoulou, Elena Fountzilas, Athina Christopoulou, Epaminondas Samantas, Anastasios Vagionas, Giannis Socrates Mountzios, Georgios Goumas, Nikolaos Tsoukalas, Ilias Athanasiadis, Dimitris Bafaloukos, Chris Panopoulos, Margarita Ioanna Koufaki, George Fountzilas, Georgios Petrakis, Helena Linardou","doi":"10.1200/CCI-25-00234","DOIUrl":"https://doi.org/10.1200/CCI-25-00234","url":null,"abstract":"<p><strong>Purpose: </strong>This trial aims to investigate the effectiveness of online digital intervention in patients with non-small cell lung cancer (NSCLC) in terms of adverse events (AEs) and quality of life (QoL).</p><p><strong>Methods: </strong>This randomized trial recruited 200 patients with advanced NSCLC (March 2022-October 2023). All patients received standard-of-care precise treatment, predominantly immunochemotherapy. The study was designed to assess AEs and QoL improvement. Through the CareAcross online platform, all patients received information about their disease and treatment and reported any of the 22 predefined AEs at any time. Patients were randomly assigned 1:1 in the intervention (A) and control (B) arm; patients in arm A automatically received, additionally, evidence-based guidance for the reported AEs. EuroQol 5-dimension 5-level responses were collected at baseline and at each treatment cycle. Resulting scores were compared between baseline and after the sixth cycle. In addition, patient case-level hospitalization data were collected and costs were estimated based on reimbursed costs as defined by the Ministry of Health, enabling a post hoc analysis.</p><p><strong>Results: </strong>Clinical characteristics were well-balanced. More AEs were reported by patients online versus to their clinicians (<i>P</i> < .01). Among the 22 AEs, 17 improved more in arm A, with the improvement in rash and stomatitis being statistically significant. In QoL, there was no improvement in any of the five EuroQol 5-Dimension dimensions. Digital intervention was cost-saving with lower mean costs for hospitalization (<i>P</i> < .001). Overall response rate, progression-free survival, and overall survival were not statistically different between the two arms, ensuring comparable clinical outcome.</p><p><strong>Conclusion: </strong>Digital oncology tends to improve selected AEs and is cost saving. Patients report, digitally, more informative AEs. Digital oncology can be a complementary tool to the oncology team and warrants further exploration.</p>","PeriodicalId":51626,"journal":{"name":"JCO Clinical Cancer Informatics","volume":"10 ","pages":"e2500234"},"PeriodicalIF":2.8,"publicationDate":"2026-02-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146114999","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Public Perspectives on Artificial Intelligence in Medicine and Radiology: Insights From a Survey in an Italian Cancer Referral Center. 公众对医学和放射学中人工智能的看法:来自意大利癌症转诊中心调查的见解。
IF 2.8 Q2 ONCOLOGY Pub Date : 2026-02-01 Epub Date: 2026-02-18 DOI: 10.1200/CCI-25-00210
Filippo Pesapane, Emilia Giambersio, Anna Rotili, Roberto Grasso, Aurora Gaeta, Ottavia Battaglia, Lorenzo Conti, Silvia Francesca Maria Pizzoli, Sara Raimondi, Sara Gandini, Gabriella Pravettoni, Enrico Cassano

Purpose: Artificial intelligence (AI) is fast becoming a vital part of health care, dramatically affecting physicians' workflows and patients' outcomes. Understanding patients' opinions on its use is thus essential to ensure its successful adoption. This study aims to evaluate public perceptions of AI in health care and explore patient feedback through a survey.

Methods: From January 2023 to June 2024, a survey on AI in health care was distributed to the public via a QR code shared through social media, posters, and videos, reaching 454 participants, of whom 240 completed the survey. Adapted from a validated 2020 model by Esmaeilzadeh et al, the survey underwent careful translation and cultural adjustments for the Italian population, including forward-backward translation and pilot testing. The survey assessed topics like willingness to use AI, performance anxiety, liability concerns, privacy issues, and its effect on doctor-patient communication. Responses were scored, with lower scores indicating greater acceptance of AI.

Results: The survey showed that 96% supported AI as a tool to assist radiologists and 92% were open to using AI for diagnostics and treatments. Concerns included reliability (61%) and reduced personal interaction (58%). Seventy-two percent trusted AI with data privacy. Overall, 90.4% viewed AI positively.

Conclusion: The study highlights a balanced perspective on AI in health care. While recognizing its potential to enhance diagnostics and treatments, participants raised concerns about reliability, accountability, and interpersonal impacts. Most supported AI as a tool to complement, not replace, human expertise, emphasizing the need for transparent, reliable systems.

目的:人工智能(AI)正迅速成为医疗保健的重要组成部分,极大地影响着医生的工作流程和患者的治疗结果。因此,了解患者对其使用的意见对于确保其成功采用至关重要。本研究旨在评估公众对人工智能在医疗保健中的看法,并通过调查探讨患者的反馈。方法:从2023年1月至2024年6月,通过社交媒体、海报、视频等方式向公众发放人工智能在卫生保健领域的调查问卷,共有454人参与,其中240人完成了调查。该调查改编自esmaiilzadeh等人的2020年验证模型,对意大利人口进行了仔细的翻译和文化调整,包括向前向后翻译和试点测试。该调查评估了使用人工智能的意愿、表现焦虑、责任担忧、隐私问题及其对医患沟通的影响等主题。对回答进行评分,分数越低表示对人工智能的接受程度越高。结果:调查显示,96%的人支持人工智能作为辅助放射科医生的工具,92%的人对使用人工智能进行诊断和治疗持开放态度。担忧包括可靠性(61%)和人际互动减少(58%)。72%的人相信人工智能可以保护数据隐私。总体而言,90.4%的人对人工智能持积极态度。结论:该研究突出了人工智能在医疗保健领域的平衡视角。与会者在认识到其加强诊断和治疗的潜力的同时,对可靠性、问责制和人际影响提出了关切。大多数人支持人工智能作为补充而不是取代人类专业知识的工具,强调需要透明、可靠的系统。
{"title":"Public Perspectives on Artificial Intelligence in Medicine and Radiology: Insights From a Survey in an Italian Cancer Referral Center.","authors":"Filippo Pesapane, Emilia Giambersio, Anna Rotili, Roberto Grasso, Aurora Gaeta, Ottavia Battaglia, Lorenzo Conti, Silvia Francesca Maria Pizzoli, Sara Raimondi, Sara Gandini, Gabriella Pravettoni, Enrico Cassano","doi":"10.1200/CCI-25-00210","DOIUrl":"https://doi.org/10.1200/CCI-25-00210","url":null,"abstract":"<p><strong>Purpose: </strong>Artificial intelligence (AI) is fast becoming a vital part of health care, dramatically affecting physicians' workflows and patients' outcomes. Understanding patients' opinions on its use is thus essential to ensure its successful adoption. This study aims to evaluate public perceptions of AI in health care and explore patient feedback through a survey.</p><p><strong>Methods: </strong>From January 2023 to June 2024, a survey on AI in health care was distributed to the public via a QR code shared through social media, posters, and videos, reaching 454 participants, of whom 240 completed the survey. Adapted from a validated 2020 model by Esmaeilzadeh et al, the survey underwent careful translation and cultural adjustments for the Italian population, including forward-backward translation and pilot testing. The survey assessed topics like willingness to use AI, performance anxiety, liability concerns, privacy issues, and its effect on doctor-patient communication. Responses were scored, with lower scores indicating greater acceptance of AI.</p><p><strong>Results: </strong>The survey showed that 96% supported AI as a tool to assist radiologists and 92% were open to using AI for diagnostics and treatments. Concerns included reliability (61%) and reduced personal interaction (58%). Seventy-two percent trusted AI with data privacy. Overall, 90.4% viewed AI positively.</p><p><strong>Conclusion: </strong>The study highlights a balanced perspective on AI in health care. While recognizing its potential to enhance diagnostics and treatments, participants raised concerns about reliability, accountability, and interpersonal impacts. Most supported AI as a tool to complement, not replace, human expertise, emphasizing the need for transparent, reliable systems.</p>","PeriodicalId":51626,"journal":{"name":"JCO Clinical Cancer Informatics","volume":"10 ","pages":"e2500210"},"PeriodicalIF":2.8,"publicationDate":"2026-02-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146222064","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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JCO Clinical Cancer Informatics
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