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Cancer metabolism meets systems biology: Pyruvate kinase isoform PKM2 is a metabolic master regulator. 肿瘤代谢符合系统生物学:丙酮酸激酶异构体PKM2是代谢的主要调节因子。
Q1 Environmental Science Pub Date : 2013-07-24 eCollection Date: 2013-01-01 DOI: 10.4103/1477-3163.115423
Fabian V Filipp

Pyruvate kinase activity is controlled by a tightly woven regulatory network. The oncofetal isoform of pyruvate kinase (PKM2) is a master regulator of cancer metabolism. PKM2 engages in parallel, feed-forward, positive and negative feedback control contributing to cancer progression. Besides its metabolic role, non-metabolic functions of PKM2 as protein kinase and transcriptional coactivator for c-MYC and hypoxia-inducible factor 1-alpha are essential for epidermal growth factor receptor activation-induced tumorigenesis. These biochemical activities are controlled by a shift in the oligomeric state of PKM2 that includes acetylation, oxidation, phosphorylation, prolyl hydroxylation and sumoylation. Metabolically active PKM2 tetramer is allosterically regulated and responds to nutritional and stress signals. Metabolically inactive PKM2 dimer is imported into the nucleus and can function as protein kinase stimulating transcription. A systems biology approach to PKM2 at the genome, transcriptome, proteome, metabolome and fluxome level reveals how differences in biomolecular structure translate into a global rewiring of cancer metabolism. Cancer systems biology takes us beyond the Warburg effect, opening unprecedented therapeutic opportunities.

丙酮酸激酶活性受一个紧密编织的调控网络控制。丙酮酸激酶(PKM2)的癌胎异构体是肿瘤代谢的主要调节因子。PKM2参与平行、前馈、正反馈和负反馈控制,有助于癌症的进展。除了代谢作用外,PKM2作为蛋白激酶、c-MYC转录辅激活因子和缺氧诱导因子1- α的非代谢功能在表皮生长因子受体激活诱导的肿瘤发生中也是必不可少的。这些生化活动是由PKM2低聚状态的转变控制的,包括乙酰化、氧化、磷酸化、脯酰羟基化和sumo化。代谢活跃的PKM2四聚体受变构调节并响应营养和应激信号。代谢不活跃的PKM2二聚体被输入细胞核,可以作为蛋白激酶刺激转录。在基因组、转录组、蛋白质组、代谢组和通量组水平上对PKM2的系统生物学方法揭示了生物分子结构的差异如何转化为癌症代谢的全球重新连接。癌症系统生物学让我们超越了华宝效应,开启了前所未有的治疗机会。
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引用次数: 50
Epidermal growth factor receptor mutation in lung adenocarcinoma in India: A single center study. 印度肺腺癌中表皮生长因子受体突变:单中心研究。
Q1 Environmental Science Pub Date : 2013-07-12 eCollection Date: 2013-01-01 DOI: 10.4103/1477-3163.114970
Dinesh Chandra Doval, Saud Azam, Ullas Batra, Kumardeep Dutta Choudhury, Vineet Talwar, Sunil Kumar Gupta, Anurag Mehta

Background: Adenocarcinoma, a subgroup of non-small cell lung cancer, is the most frequent form occurring in the non-smokers. Mutation in tyrosine kinase domain of epidermal growth factor receptor (EGFR) has been a common feature observed in lung adenocarcinoma. The study was carried out to detect the prevalence of EGFR mutation in lung adenocarcinoma.

Materials and methods: EGFR mutation status in 166 lung adenocarcinoma patients was obtained retrospectively. Mutation tests were performed on paraffin embedded tissue blocks as a routine diagnostic procedure by polymerase chain reaction followed by direct nucleotide sequencing. Patient's demographics and other clinical details were obtained from the medical records.

Results: EGFR mutation was detected in 43/166 (25.9%) patients. Gender wise mutation was observed as 18/55 (32.7%) in females and 25/111 (22.5%) in males. Overall, EGFR mutation was correlated with never smokers and distant metastasis (P < 0.05), but not associated with the gender, disease stage and pleural effusion. Exon 19 deletions were significantly correlated with females, never smokers, pleural effusion and distant metastasis (P < 0.05). However, point mutation on exon 21 did not show any statistical association with the above variables. Median overall survival was 22 months (95% confidence interval, 15.4-28.6). Female sex, EGFR mutation and absence of metastasis are associated with good prognosis.

Conclusion: EGFR mutation in lung adenocarcinoma was higher in never smokers, females and patients with distant metastasis. However, it was not linked with tobacco smoking. The prevalence of EGFR mutation observed is in range with the previously published reports from the Asian countries.

背景:腺癌是非小细胞肺癌的一个亚组,是发生在非吸烟者中的最常见形式。表皮生长因子受体(EGFR)酪氨酸激酶结构域突变是肺腺癌的共同特征。本研究旨在检测EGFR突变在肺腺癌中的患病率。材料与方法:回顾性分析166例肺腺癌患者的EGFR突变情况。在石蜡包埋组织块上进行突变试验,作为常规诊断程序,采用聚合酶链反应,然后进行直接核苷酸测序。患者的人口统计数据和其他临床细节从医疗记录中获得。结果:43/166例(25.9%)患者检测到EGFR突变。性别变异女性为18/55(32.7%),男性为25/111(22.5%)。总体而言,EGFR突变与不吸烟者和远处转移相关(P < 0.05),但与性别、疾病分期和胸腔积液无关。外显子19缺失与女性、从不吸烟、胸腔积液和远处转移相关(P < 0.05)。而外显子21上的点突变与上述变量没有统计学相关性。中位总生存期为22个月(95%可信区间,15.4-28.6)。女性、EGFR突变和无转移与预后良好相关。结论:EGFR突变在从不吸烟、女性和有远处转移的肺腺癌中较高。然而,它与吸烟无关。观察到的EGFR突变流行率与先前发表的亚洲国家报告的范围一致。
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引用次数: 34
Stage-specific analysis of plasma protein profiles in ovarian cancer: Difference in-gel electrophoresis analysis of pooled clinical samples. 卵巢癌血浆蛋白谱的分期特异性分析:汇集临床样本的凝胶电泳分析差异
Q1 Environmental Science Pub Date : 2013-06-29 Print Date: 2013-01-01 DOI: 10.4103/1477-3163.114216
Mark J Bailey, Kristy L Shield-Artin, Karen Oliva, Mustafa Ayhan, Simone Reisman, Gregory E Rice

Introduction: Ovarian cancer is the leading cause of death from gynecological cancer. Non-specific symptoms early in disease and the lack of specific biomarkers hinder early diagnosis. Multi-marker blood screening tests have shown promise for improving identification of early stage disease; however, available tests lack sensitivity, and specificity.

Materials and methods: In this study, pooled deeply-depleted plasma from women with Stage 1, 2 or 3 ovarian cancer and healthy controls were used to compare the 2-dimensional gel electrophoresis (2-DE) protein profiles and identify potential novel markers of ovarian cancer progression.

Results/discussion: Stage-specific variation in biomarker expression was observed. For example, apolipoprotein A1 expression is relatively low in control and Stage 1, but shows a substantial increase in Stage 2 and 3, thus, potential of utility for disease confirmation rather than early detection. A better marker for early stage disease was tropomyosin 4 (TPM4). The expression of TPM4 increased by 2-fold in Stage 2 before returning to "normal" levels in Stage 3 disease. Multiple isoforms were also identified for some proteins and in some cases, displayed stage-specific expression. An interesting example was fibrinogen alpha, for which 8 isoforms were identified. Four displayed a moderate increase at Stage 1 and a substantial increase for Stages 2 and 3 while the other 4 showed only moderate increases.

Conclusion: Herein is provided an improved summary of blood protein profiles for women with ovarian cancer stratified by stage.

卵巢癌是导致妇科癌症死亡的主要原因。疾病早期的非特异性症状和缺乏特异性生物标志物阻碍了早期诊断。多标记物血液筛查试验已显示出改善早期疾病识别的希望;然而,现有的检测缺乏敏感性和特异性。材料和方法:在本研究中,收集了来自1期、2期或3期卵巢癌妇女和健康对照者的深度耗尽血浆,用于比较二维凝胶电泳(2- de)蛋白谱,并确定卵巢癌进展的潜在新标志物。结果/讨论:观察到生物标志物表达的阶段性变化。例如,载脂蛋白A1在对照组和第一阶段的表达相对较低,但在第二和第三阶段显示出大量增加,因此,在疾病确认而不是早期发现方面具有潜在的效用。较好的早期疾病标志物是原肌球蛋白4 (TPM4)。TPM4的表达在2期增加了2倍,然后在3期疾病中恢复到“正常”水平。一些蛋白质的多个同种异构体也被鉴定出来,在某些情况下,显示出特定阶段的表达。一个有趣的例子是纤维蛋白原α,鉴定出8种同种异构体。其中4人在第一阶段表现出中度增加,在第二和第三阶段大幅增加,而其他4人仅表现出中度增加。结论:本文提供了一个改进的总结血蛋白谱的妇女卵巢癌分期分层。
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引用次数: 14
Effects of maternal dietary exposure to cadmium during pregnancy on mammary cancer risk among female offspring. 母亲在怀孕期间饮食接触镉对女性后代患乳腺癌风险的影响。
Q1 Environmental Science Pub Date : 2013-06-29 Print Date: 2013-01-01 DOI: 10.4103/1477-3163.114219
Jennifer Davis, Galam Khan, Mary Beth Martin, Leena Hilakivi-Clarke

Background: Since heavy metal cadmium is an endocrine disrupting chemical, we investigated whether maternal exposure to cadmium during the pregnancy alters mammary tumorigenesis among female offspring.

Methods: From gestation day 10 to day 19, pregnant rat dams were fed modified American Institute of Nutrition (AIN93G) diet containing 39% energy from fat (baseline diet), or the baseline diet containing moderate (75 μg/kg of feed) or high (150 μg/kg) cadmium levels. Some dams were injected with 10 μg 17β-estradiol (E2) daily between gestation days 10 and 19.

Results: Rats exposed to a moderate cadmium dose in utero were heavier and exhibited accelerated puberty onset. Both moderate and high cadmium dose led to increased circulating testosterone levels and reduced the expression of androgen receptor in the mammary gland. The moderate cadmium dose mimicked the effects of in utero E2 exposure on mammary gland morphology and increased both the number of terminal end buds and pre-malignant hyperplastic alveolar nodules (HANs), but in contrast to the E2, it did not increase 7, 12-dimethylbenz (a) anthracene-induced mammary tumorigenesis.

Conclusions: The effects of in utero cadmium exposure were dependent on the dose given to pregnant dams: Moderate, but not high, cadmium dose mimicked some of the effects seen in the in utero E2 exposed rats, such as increased HANs in the mammary gland.

背景:由于重金属镉是一种内分泌干扰化学物质,我们研究了母体在怀孕期间接触镉是否会改变雌性后代的乳腺肿瘤发生。方法:从妊娠第10天至第19天,饲喂含有39%脂肪能量的改良美国营养学会(AIN93G)日粮(基线日粮)和中等(75 μg/kg饲料)或高(150 μg/kg饲料)镉含量的基线日粮。在妊娠第10 ~ 19天,部分母鼠每天注射10 μg的17β-雌二醇(E2)。结果:在子宫内暴露于中等剂量镉的大鼠体重增加,青春期发育加速。中、高剂量镉均导致乳腺循环睾酮水平升高,雄激素受体表达降低。中等剂量的镉模拟了子宫内暴露于E2对乳腺形态的影响,增加了终末芽和癌前增生肺泡结节(HANs)的数量,但与E2相比,它没有增加7,12 -二甲基苯(a)蒽诱导的乳腺肿瘤发生。结论:子宫内镉暴露的影响依赖于给孕鼠的剂量:中等但不高的镉剂量模拟了子宫内暴露于E2的大鼠的一些影响,如乳腺中汉斯胺的增加。
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引用次数: 11
Applications of metabolomics in cancer research. 代谢组学在癌症研究中的应用。
Q1 Environmental Science Pub Date : 2013-06-18 Print Date: 2013-01-01 DOI: 10.4103/1477-3163.113622
Kathleen A Vermeersch, Mark P Styczynski

The first discovery of metabolic changes in cancer occurred almost a century ago. While the genetic underpinnings of cancer have dominated its study since then, altered metabolism has recently been acknowledged as a key hallmark of cancer and metabolism-focused research has received renewed attention. The emerging field of metabolomics - which attempts to profile all metabolites within a cell or biological system - is now being used to analyze cancer metabolism on a system-wide scale, painting a broad picture of the altered pathways and their interactions with each other. While a large fraction of cancer metabolomics research is focused on finding diagnostic biomarkers, metabolomics is also being used to obtain more fundamental mechanistic insight into cancer and carcinogenesis. Applications of metabolomics are also emerging in areas such as tumor staging and assessment of treatment efficacy. This review summarizes contributions that metabolomics has made in cancer research and presents the current challenges and potential future directions within the field.

癌症中代谢变化的首次发现发生在近一个世纪以前。从那时起,癌症的遗传基础一直主导着研究,但最近,代谢改变被认为是癌症的一个关键标志,以代谢为重点的研究重新受到关注。新兴的代谢组学领域——试图分析细胞或生物系统内的所有代谢物——现在正被用于分析全系统范围内的癌症代谢,描绘出改变的途径及其相互作用的广阔图景。虽然大部分癌症代谢组学研究的重点是寻找诊断性生物标志物,但代谢组学也被用于获得对癌症和致癌机理的更基本的了解。代谢组学在肿瘤分期和治疗效果评估等领域的应用也在不断涌现。本文综述了代谢组学在癌症研究中的贡献,并提出了该领域目前面临的挑战和潜在的未来方向。
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引用次数: 89
Digitoxin induces apoptosis in cancer cells by inhibiting nuclear factor of activated T-cells-driven c-MYC expression. 洋地黄素通过抑制活化t细胞驱动的c-MYC表达的核因子诱导癌细胞凋亡。
Q1 Environmental Science Pub Date : 2013-05-20 Print Date: 2013-01-01 DOI: 10.4103/1477-3163.112268
Qing Feng Yang, Clifton L Dalgard, Ofer Eidelman, Catherine Jozwik, Bette S Pollard, Meera Srivastava, Harvey B Pollard

Background: Cardiac glycosides such as digitoxin have been shown to directly cause apoptotic death of cancer cells both in vitro, and in vivo. However, the mechanism connecting cardiac glycoside action to apoptosis is not known. It has been reported that compounds resembling digitoxin are able to reduce c-MYC expression. Furthermore, it has been previously shown that the transcription of c-MYC depends on nuclear factor of activated T-cells (NFAT) binding sites in the c-MYC promoter. We have therefore hypothesized that NFAT might mediate digitoxin effects on c-MYC mRNA message.

Materials and methods: We have chosen to study this process in HeLa cells where structurally intact c-MYC genes in 8q24 co-localize with human papilloma virus 18 at all integration sites.

Results: Here we show that within the 1(st) h following treatment with digitoxin, a significant reduction in c-MYC mRNA occurs. This is followed by a precipitous loss of c-MYC protein, activation of caspase 3, and subsequent apoptotic cell death. To test the NFAT-dependence mechanism, we analyzed the effects of digitoxin on NFAT isoform-dependent auto-activation of a NFAT-luciferase expression system. Drug dependent effects on expression varied according to each of the four canonical NFAT isoforms (1, 2, 3 or 4). The most digitoxin-sensitive NFAT isoform was NFAT1. Using c-MYC chromatin immune precipitation, we find that digitoxin inhibits interaction of NFAT1 with the proximal c-MYC promoter.

Conclusions: These results suggest that the carcinotoxic activity of digitoxin includes suppression of NFAT-driven c-MYC expression.

背景:在体内和体外实验中,心脏苷类药物如洋地黄毒素可直接导致癌细胞凋亡。然而,连接心脏糖苷作用与细胞凋亡的机制尚不清楚。据报道,类似洋地黄毒素的化合物能够降低c-MYC的表达。此外,先前的研究表明,c-MYC的转录依赖于c-MYC启动子中的活化t细胞核因子(NFAT)结合位点。因此,我们假设NFAT可能介导洋地黄毒素对c-MYC mRNA信息的影响。材料和方法:我们选择在HeLa细胞中研究这一过程,其中8q24结构完整的c-MYC基因与人乳头瘤病毒18在所有整合位点共定位。结果:我们发现在洋地黄素治疗后的1(st) h内,c-MYC mRNA显著降低。随后是c-MYC蛋白的急剧丧失,caspase 3的激活,以及随后的凋亡细胞死亡。为了测试NFAT依赖机制,我们分析了洋地黄毒素对NFAT-荧光素酶表达系统的NFAT亚型依赖的自激活的影响。四种典型的NFAT异构体(1、2、3或4)对表达的药物依赖作用各不相同。对地黄霉素最敏感的NFAT异构体是NFAT1。利用c-MYC染色质免疫沉淀,我们发现洋地黄毒素抑制NFAT1与近端c-MYC启动子的相互作用。结论:这些结果表明洋地黄毒素的致癌活性包括抑制nfat驱动的c-MYC表达。
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引用次数: 20
Targeted agents in non-small cell lung cancer therapy: What is there on the horizon? 靶向药物用于非小细胞肺癌治疗:有什么新进展?
Q1 Environmental Science Pub Date : 2013-03-18 Print Date: 2013-01-01 DOI: 10.4103/1477-3163.109253
Victoria M Villaflor, Ravi Salgia

Lung cancer is a heterogeneous group of diseases. There has been much research in lung cancer over the past decade which has advanced our ability to treat these patients with a more personalized approach. The scope of this paper is to review the literature and give a broad understanding of the current molecular targets for which we currently have therapies as well as other targets for which we may soon have therapies. Additionally, we will cover some of the issues of resistance with these targeted therapies. The molecular targets we intend to discuss are epidermal growth factor receptor (EGFR), Vascular endothelial growth factor (VEGF), anaplastic large-cell lymphoma kinase (ALK), KRAS, C-MET/RON, PIK3CA. ROS-1, RET Fibroblast growth factor receptor (FGFR). Ephrins and their receptors, BRAF, and immunotherapies/vaccines. This manuscript only summarizes the work which has been done to date and in no way is meant to be comprehensive.

肺癌是一种异质性疾病。在过去的十年里,有很多关于肺癌的研究,这些研究提高了我们用更个性化的方法治疗这些患者的能力。本文的范围是回顾文献,并对我们目前有治疗方法的当前分子靶点以及我们可能很快有治疗方法的其他靶点进行广泛的了解。此外,我们将讨论这些靶向治疗的一些耐药性问题。我们打算讨论的分子靶点是表皮生长因子受体(EGFR)、血管内皮生长因子(VEGF)、间变性大细胞淋巴瘤激酶(ALK)、KRAS、C-MET/RON、PIK3CA。ROS-1, RET成纤维细胞生长因子受体(FGFR)。ephrin及其受体,BRAF和免疫疗法/疫苗。这份手稿只是总结了迄今为止所做的工作,绝不是全面的。
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引用次数: 13
Human endogenous retroviral K element encodes fusogenic activity in melanoma cells. 人内源性逆转录病毒K元件编码黑色素瘤细胞的促聚变活性。
Q1 Environmental Science Pub Date : 2013-03-16 Print Date: 2013-01-01 DOI: 10.4103/1477-3163.109032
Gengming Huang, Zhongwu Li, Xiaohua Wan, Yue Wang, Jianli Dong

Introduction and hypothesis: Nuclear atypia with features of multi nuclei have been detected in human melanoma specimens. We found that the K type human endogenous retroviral element (HERV K) is expressed in such cells. Since cellular syncytia can form when cells are infected with retroviruses, we hypothesized that HERV K expressed in melanoma cells may contribute to the formation of multinuclear atypia cells in melanoma.

Experiments and results: We specifically inhibited HERV K expression using RNA interference (RNAi) and monoclonal antibodies and observed dramatic reduction of intercellular fusion of cultured melanoma cells. Importantly, we identified loss of heterozygosity (LOH)of D19S433 in a cell clone that survived and proliferated after cell fusion.

Conclusion: Our results support the notion that proteins encoded by HERV K can mediate intercellular fusion of melanoma cells, which may generate multinuclear cells and drive the evolution of genetic changes that provide growth and survival advantages.

简介与假设:在人类黑色素瘤标本中检测到具有多核特征的核异型性。我们发现K型人内源性逆转录病毒元件(HERV K)在这些细胞中表达。由于细胞被逆转录病毒感染时可以形成细胞合胞体,我们假设黑色素瘤细胞中表达的HERV K可能有助于黑色素瘤中多核异型细胞的形成。实验和结果:我们使用RNA干扰(RNAi)和单克隆抗体特异性抑制HERV K的表达,观察到培养的黑色素瘤细胞间融合显著减少。重要的是,我们在细胞融合后存活和增殖的细胞克隆中发现了D19S433的杂合性缺失(LOH)。结论:我们的研究结果支持HERV K编码的蛋白可以介导黑色素瘤细胞间融合的观点,这种融合可能产生多核细胞,并驱动遗传变化的进化,从而提供生长和生存优势。
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引用次数: 40
Cell of origin of lung cancer. 肺癌的起源细胞。
Q1 Environmental Science Pub Date : 2013-03-16 Print Date: 2013-01-01 DOI: 10.4103/1477-3163.109033
Jennifer M Hanna, Mark W Onaitis

Lung cancer is the leading cause of cancer deaths worldwide, and current therapies are disappointing. Elucidation of the cell(s) of origin of lung cancer may lead to new therapeutics. In addition, the discovery of putative cancer-initiating cells with stem cell properties in solid tumors has emerged as an important area of cancer research that may explain the resistance of these tumors to currently available therapeutics. Progress in our understanding of normal tissue stem cells, tumor cell of origin, and cancer stem cells has been hampered by the heterogeneity of the disease, the lack of good in vivo transplantation models to assess stem cell behavior, and an overall incomplete understanding of the epithelial stem cell hierarchy. As such, a systematic computerized literature search of the MEDLINE database was used to identify articles discussing current knowledge about normal lung and lung cancer stem cells or progenitor cells. In this review, we discuss what is currently known about the role of cancer-initiating cells and normal stem cells in the development of lung tumors.

肺癌是全球癌症死亡的主要原因,目前的治疗方法令人失望。阐明肺癌的起源细胞可能会导致新的治疗方法。此外,在实体肿瘤中发现具有干细胞特性的癌症启动细胞已经成为癌症研究的一个重要领域,这可能解释了这些肿瘤对现有治疗方法的耐药性。由于疾病的异质性、缺乏良好的体内移植模型来评估干细胞的行为以及对上皮干细胞等级的整体不完整理解,我们对正常组织干细胞、肿瘤细胞起源和癌症干细胞的理解进展受到阻碍。因此,对MEDLINE数据库进行系统的计算机文献检索,以确定讨论正常肺细胞和肺癌干细胞或祖细胞的当前知识的文章。在这篇综述中,我们讨论了目前已知的癌症起始细胞和正常干细胞在肺肿瘤发展中的作用。
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引用次数: 137
Missense allele of a single nucleotide polymorphism rs2294008 attenuated antitumor effects of prostate stem cell antigen in gallbladder cancer cells. 单核苷酸多态性错义等位基因rs2294008减弱前列腺干细胞抗原在胆囊癌细胞中的抗肿瘤作用。
Q1 Environmental Science Pub Date : 2013-03-16 Print Date: 2013-01-01 DOI: 10.4103/1477-3163.109030
Hiroe Ono, Dai Chihara, Fumiko Chiwaki, Kazuyoshi Yanagihara, Hiroki Sasaki, Hiromi Sakamoto, Hideo Tanaka, Teruhiko Yoshida, Norihisa Saeki, Keitaro Matsuo

Background: Prostate stem cell antigen (PSCA), an organ-dependent tumor suppressor, is down regulated in gallbladder cancer (GBC). It is anticipated that the missense allele C of the single nucleotide polymorphism (SNP) rs2294008 (T/C) in the translation initiation codon of the gene affects the gene's biological function and has some influence on GBC susceptibility. We examined the biological effect of the C allele on the function of the gene and the relation between the C allele and GBC susceptibility.

Materials and methods: Functional analysis of the SNP was conducted by introducing PSCA cDNA harboring the allele to a GBC cell line TGBC- 1TKB and performing colony formation assays in vitro and tumor formation assays in mice. The effect on transcriptional regulation was assessed by reporter assays. The association study was conducted on 44 Japanese GBC cases and 173 controls.

Results: The PSCA cDNA harboring the C allele showed lower cell growth inhibition activity (20% reduction) than that with the T allele. Concordantly, when injected into subcutaneous tissues of mice, the GBC cell line stably expressing the cDNA with the C allele formed tumors of almost the same size as that of the control cells, but the cell line expressing the cDNA with the T allele showed slower growth. The upstream DNA fragment harboring the C allele had more transcriptional activity than that with the T allele. The C allele showed positive correlation to GBC but no statistical significant odds ratio (OR = 1.77, 95% confidence interval 0.85-3.70, P value = 0.127 in dominant model).

Conclusions: The missense allele was shown to have a biological effect, attenuating antitumor activities of PSCA, and consequently it may be a potential risk for GBC development. An association study in a larger sample size may reveal a significant association between the allele and GBC.

背景:前列腺干细胞抗原(PSCA)是一种器官依赖性肿瘤抑制因子,在胆囊癌(GBC)中下调。预计该基因翻译起始密码子单核苷酸多态性(SNP) rs2294008 (T/C)错义等位基因C影响该基因的生物学功能,并对GBC易感性有一定影响。我们检测了C等位基因对基因功能的生物学效应以及C等位基因与GBC易感性的关系。材料和方法:将携带该等位基因的PSCA cDNA导入GBC细胞系TGBC- 1TKB,进行体外集落形成实验和小鼠肿瘤形成实验,对SNP进行功能分析。通过报告者试验评估对转录调控的影响。该关联研究在44例日本GBC病例和173例对照中进行。结果:含C等位基因的PSCA cDNA的细胞生长抑制活性比含T等位基因的低20%。与此一致的是,当注入小鼠皮下组织时,稳定表达C等位基因cDNA的GBC细胞系形成的肿瘤大小与对照细胞几乎相同,而表达T等位基因cDNA的细胞系生长速度较慢。含有C等位基因的上游DNA片段比含有T等位基因的上游DNA片段具有更高的转录活性。C等位基因与GBC呈正相关,但优势比无统计学意义(OR = 1.77, 95%可信区间0.85 ~ 3.70,优势模型P值= 0.127)。结论:该错义等位基因具有生物学效应,可减弱PSCA的抗肿瘤活性,因此可能是GBC发展的潜在风险。更大样本量的关联研究可能揭示等位基因与GBC之间的显著关联。
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引用次数: 14
期刊
Journal of Carcinogenesis
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