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The role of exome data reanalysis in clarifying STXBP3 associated inflammatory bowel disease and hearing loss. 外显子组数据再分析在澄清STXBP3相关炎症性肠病和听力损失中的作用
IF 3.8 3区 医学 Q2 GASTROENTEROLOGY & HEPATOLOGY Pub Date : 2025-06-16 eCollection Date: 2025-01-01 DOI: 10.1093/gastro/goaf053
Lukáš Ryba, Tereza Lerchová, Jiří Bronský, Markéta Vlčková
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引用次数: 0
Single-cell transcriptomic landscape indicates the potential role of immunotherapy in metastatic pancreatic angiosarcoma. 单细胞转录组显示免疫治疗在转移性胰腺血管肉瘤中的潜在作用。
IF 3.8 3区 医学 Q2 GASTROENTEROLOGY & HEPATOLOGY Pub Date : 2025-06-16 eCollection Date: 2025-01-01 DOI: 10.1093/gastro/goaf046
Yizhen Yang, Luohai Chen, Man Liu, Xiaoxuan Lin, Sui Peng, Yubin Xie, Zhirong Zeng, Minhu Chen, Ning Zhang

Background: Pancreatic angiosarcoma is a rare and highly aggressive tumor originating from lymphatic or vascular endothelial cells, with poor prognosis and few effective treatments. In this study, we aimed to characterize the tumor ecosystem of metastatic pancreatic angiosarcoma, along with its potential treatment strategies.

Methods: Single-cell RNA-sequencing and bioinformatics analysis were performed on samples obtained from one patient, including at total of 16,841 cells from pancreatic angiosarcoma liver metastasis and adjacent normal liver tissue.

Results: Pancreatic angiosarcoma cells exhibited marked upregulation of nuclear factor kappa-B (NF-κB), hypoxia-inducible factor 1 (HIF-1), and myelocytomatosis oncogene (MYC) proto-oncogene signaling pathways, while presenting limited upregulation of actionable therapeutic targets except for cyclin-dependent kinase 4 (CDK4) and epidermal growth factor receptor. Several immune checkpoint genes, including cytotoxic T-lymphocyte-associated protein 4 (CTLA4), lymphocyte-activation gene 3 (LAG3), programmed cell death protein 1 (PDCD1), and cluster of differentiation 86 (CD86), were upregulated in tumor-infiltrating T cells, natural killer (NK) cells, and myeloid cells. Furthermore, intercellular interaction profiling demonstrated enhanced activity of the programmed death-ligand 1 (PD-L1) and CD86 signaling pathways within the tumor microenvironment. The gene-set scores of T/NK-cell exhaustion, regulatory T cell, and macrophage angiogenesis were significantly higher in tumor tissues compared with adjacent normal tissues. However, the phagocytosis scores of macrophages within the tumor-infiltrating region were significantly lower than those in the adjacent normal tissues.

Conclusions: Our findings outlined an immunosuppressive and angiogenic tumor ecosystem in pancreatic angiosarcoma liver metastasis, suggesting that pancreatic angiosarcoma may be insensitive to most targeted therapies. Conversely, immunotherapies targeting LAG3, PD-L1, and CD86 (e.g. isatuximab, Opdualag, and abatacept) and anti-angiogenic agents may be therapeutically effective and worthy of subsequent exploration.

背景:胰腺血管肉瘤是一种起源于淋巴细胞或血管内皮细胞的罕见的高侵袭性肿瘤,预后差,治疗效果差。在这项研究中,我们旨在描述转移性胰腺血管肉瘤的肿瘤生态系统,以及其潜在的治疗策略。方法:对1例胰腺血管肉瘤肝转移及邻近正常肝组织的16841个细胞进行单细胞rna测序和生物信息学分析。结果:胰腺血管肉瘤细胞表现出核因子κ b (NF-κB)、缺氧诱导因子1 (HIF-1)和髓细胞瘤癌基因(MYC)原癌基因信号通路的显著上调,而除细胞周期蛋白依赖性激酶4 (CDK4)和表皮生长因子受体外,可操作的治疗靶点的上调有限。几种免疫检查点基因,包括细胞毒性T淋巴细胞相关蛋白4 (CTLA4)、淋巴细胞激活基因3 (LAG3)、程序性细胞死亡蛋白1 (PDCD1)和分化簇86 (CD86),在肿瘤浸润性T细胞、自然杀伤细胞(NK)细胞和髓细胞中上调。此外,细胞间相互作用分析显示,肿瘤微环境中程序性死亡配体1 (PD-L1)和CD86信号通路的活性增强。肿瘤组织中T/ nk细胞衰竭、调节性T细胞和巨噬细胞血管生成的基因集评分明显高于邻近正常组织。然而,肿瘤浸润区巨噬细胞的吞噬评分明显低于邻近正常组织。结论:我们的研究结果概述了胰腺血管肉瘤肝转移中免疫抑制和血管生成的肿瘤生态系统,表明胰腺血管肉瘤可能对大多数靶向治疗不敏感。相反,针对LAG3、PD-L1和CD86的免疫疗法(如isatuximab、Opdualag和abatacept)和抗血管生成药物可能具有治疗效果,值得进一步探索。
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引用次数: 0
Metabolic dysfunction-associated steatotic liver disease is associated with the risk of severe liver fibrosis in pediatric population. 在儿科人群中,代谢功能障碍相关的脂肪变性肝病与严重肝纤维化的风险相关
IF 3.8 3区 医学 Q2 GASTROENTEROLOGY & HEPATOLOGY Pub Date : 2025-06-16 eCollection Date: 2025-01-01 DOI: 10.1093/gastro/goaf056
Wei Li, Lina Jiang, Meiling Li, Chen Lin, Li Zhu, Bokang Zhao, Yisi Liu, Yan Li, Yiyun Jiang, Shuhong Liu, Ping Liang, Junqi Niu, Jingmin Zhao

Metabolic dysfunction-associated steatotic liver disease (MASLD) has been proposed to replace the term of non-alcoholic fatty liver disease (NAFLD). To investigate the effect of MASLD on liver fibrosis and validate the clinical utility of MASLD criteria, differences in disease severity and clinical outcomes between MASLD and NAFLD were compared in a biopsy-proven pediatric cohort. The retrospective clinical data of 427 children with biopsy-proven steatotic liver between 2010 and 2021 were consecutively collected and categorized into three distinct subgroups of MASLD-only, NAFLD-only, and MASLD-NAFLD according to the diagnostic guidelines. Patients with MASLD-only and MASLD-NAFLD had more features of metabolic disorders, with higher level of triglycerides but lower level of high-density lipoprotein cholesterol than NAFLD-only. The proportion of significant fibrosis was highest in MASLD-only patients (68.0%), followed by those with MASLD-NAFLD and NAFLD-only (43.3% and 19.4%, respectively; P <0.001). More steatohepatitis was presented in MASLD-NAFLD group than the other two groups (66.1% vs 30.8% vs 22.6%, P <0.001). Multivariate regression revealed that children with MASLD-only had 5.8-fold greater risk of significant fibrosis than those with NAFLD-only (P =0.001). After a median follow-up of 83 months, 14 of 427 patients developed clinical outcomes. Kaplan-Meier curves indicated no difference in the cumulative incidence of clinical events between the groups (log-rank, P =0.073). Children in MASLD group tended to have concomitant with severe liver fibrosis and related metabolic diseases compared to those with NAFLD-only in pediatric cohort. Thus, the redefinition of MASLD may improve the detection of children with severe disease that need early intervention.

代谢功能障碍相关脂肪变性肝病(MASLD)已被提议取代非酒精性脂肪性肝病(NAFLD)。为了研究MASLD对肝纤维化的影响并验证MASLD标准的临床效用,在活检证实的儿科队列中比较了MASLD和NAFLD在疾病严重程度和临床结局方面的差异。连续收集2010 - 2021年427例经活检证实的儿童脂肪变性肝的回顾性临床资料,根据诊断指南将其分为仅masld、仅nafld和MASLD-NAFLD三个不同的亚组。与单纯nafld相比,MASLD-only和MASLD-NAFLD患者具有更多的代谢紊乱特征,甘油三酯水平较高,高密度脂蛋白胆固醇水平较低。单纯masld患者显著纤维化比例最高(68.0%),其次是合并MASLD-NAFLD和单纯nafld患者(分别为43.3%和19.4%);P 0.001)。MASLD-NAFLD组脂肪性肝炎发生率高于其他两组(66.1% vs 30.8% vs 22.6%, P < 0.001)。多因素回归显示,仅患有masld的儿童发生显著纤维化的风险比仅患有nafld的儿童高5.8倍(P = 0.001)。中位随访83个月后,427名患者中有14名出现临床结果。Kaplan-Meier曲线显示两组间临床事件的累积发生率无差异(log-rank, P = 0.073)。与仅患有nafld的儿童相比,MASLD组儿童倾向于合并严重肝纤维化和相关代谢性疾病。因此,重新定义MASLD可以提高对需要早期干预的严重疾病儿童的发现。
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引用次数: 0
Pressurized intraperitoneal aerosol chemotherapy in advanced gastric cancer with peritoneal metastases: a comprehensive meta-analysis of feasibility, efficacy, and safety. 加压腹腔内气雾化疗治疗晚期胃癌伴腹膜转移:可行性、有效性和安全性的综合meta分析
IF 3.8 3区 医学 Q2 GASTROENTEROLOGY & HEPATOLOGY Pub Date : 2025-06-15 eCollection Date: 2025-01-01 DOI: 10.1093/gastro/goaf040
Ruijian Chen, Zifeng Yang, Renjie Li, Yuesheng Yang, Jiabin Zheng, Junjiang Wang, Yong Li

Pressurized intraperitoneal aerosol chemotherapy (PIPAC) has emerged as a promising therapeutic approach for treating advanced gastric cancer with peritoneal metastases. Herein, we conducted this meta-analysis to evaluate the feasibility, efficacy, and safety of PIPAC in this patient population. The literature between January 2011 and February 2024 was comprehensively searched on the following databases: PubMed, Embase, Web of Science, and the Cochrane Library. The search, guided by the Population-Intervention-Comparison-Outcome (PICO) framework, focused on studies reporting on the feasibility, efficacy, and safety of PIPAC. Data were pooled by using log transformation (PLN) or Freeman-Tukey double arcsine transformation. Of the 451 initially identified studies, 18 were included in the meta-analysis, comprising 671 patients who underwent 1,357 PIPAC procedures. Our data analysis indicated that 32.6% of the patients (95% confidence interval [CI], 23.5%-42.3%) completed three or more PIPAC procedures. Conversely, 2.3% of patients (95% CI, 0.6%-5%) either did not have access to or could not undergo PIPAC. The average rate of histological response across the included studies was 66.3% (95% CI, 59.1%-73.1%). Pooled results showed that 13.1% of patients (95% CI, 7.0%-20.7%) had reduced ascites after PIPAC, and 7.8% (95% CI, 4.8%-11.4%) became resectable. Adverse events were reported in 17.1% of patients (95% CI, 5.3%-33.4%), with 3.6% (95% CI, 1.4%-6.6%) experiencing severe adverse events (grade 3-5, Common Terminology Criteria for Adverse Events [CTCAE]). The pooled mortality related to PIPAC was 0.1% (95% CI, 0%-0.5%). The pooled proportions for 6-month, 1-year, and 2-year overall survival rates were 82.4% (95% CI, 69.2%-92.8%), 54.0% (95% CI, 45.7%-62.3%), and 20.0% (95% CI, 11.3%-30.3%), respectively. The average median overall survival was 11.7 months (95% CI, 9.3-14.0 months). Our study suggests that most patients can benefit from PIPAC treatment, such as improved quality of life and significantly longer median overall survival. Patients who received first-line chemotherapy prior to PIPAC and concomitant systemic chemotherapy during PIPAC treatment, and who underwent the PIPAC procedure on more than three occasions, exhibited a more favorable survival prognosis.

加压腹腔内气溶胶化疗(PIPAC)已成为治疗晚期胃癌伴腹膜转移的一种有前景的治疗方法。在此,我们进行了这项荟萃分析,以评估PIPAC在该患者群体中的可行性、有效性和安全性。2011年1月至2024年2月的文献在以下数据库中进行了全面检索:PubMed, Embase, Web of Science和Cochrane Library。在人群-干预-比较-结果(PICO)框架的指导下,研究重点是关于PIPAC的可行性、有效性和安全性的研究报告。采用对数变换(PLN)或Freeman-Tukey双反正弦变换合并数据。在最初确定的451项研究中,18项纳入了荟萃分析,包括671例接受了1,357例PIPAC手术的患者。我们的数据分析表明,32.6%的患者(95%可信区间[CI], 23.5%-42.3%)完成了3次或以上的PIPAC手术。相反,2.3%的患者(95% CI, 0.6%-5%)没有获得或不能接受PIPAC。纳入研究的平均组织学反应率为66.3% (95% CI, 59.1%-73.1%)。合并结果显示,13.1%的患者(95% CI, 7.0%-20.7%)在PIPAC后腹水减少,7.8% (95% CI, 4.8%-11.4%)可以切除。17.1%的患者报告了不良事件(95% CI, 5.3%-33.4%),其中3.6% (95% CI, 1.4%-6.6%)发生了严重不良事件(3-5级,不良事件通用术语标准[CTCAE])。与PIPAC相关的总死亡率为0.1% (95% CI, 0%-0.5%)。6个月、1年和2年总生存率的合并比例分别为82.4% (95% CI, 69.2%-92.8%)、54.0% (95% CI, 45.7%-62.3%)和20.0% (95% CI, 11.3%-30.3%)。平均中位总生存期为11.7个月(95% CI, 9.3-14.0个月)。我们的研究表明,大多数患者可以从PIPAC治疗中获益,如改善生活质量和显着延长中位总生存期。在PIPAC治疗前接受一线化疗并在PIPAC治疗期间同时接受全身化疗的患者,以及接受三次以上PIPAC手术的患者,表现出更有利的生存预后。
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引用次数: 0
Association of maternal smoking, breastfeeding, and multiple birth with irritable bowel syndrome in older adults: a UK Biobank cohort study. 在老年人中,母亲吸烟、母乳喂养和多胞胎与肠易激综合征的关系:英国生物银行队列研究
IF 3.8 3区 医学 Q2 GASTROENTEROLOGY & HEPATOLOGY Pub Date : 2025-06-11 eCollection Date: 2025-01-01 DOI: 10.1093/gastro/goaf042
Xinyang Liu, Ruilang Lin, Xinyue Li, Mengjiang He, Yanbo Liu, Jianwei Hu, Weifeng Chen, Quanlin Li, Yongfu Yu, Pinghong Zhou

Background: We aimed to investigate associations between three perinatal early-life factors and the risk of irritable bowel syndrome (IBS) in middle-aged and elderly people by using data from UK Biobank.

Methods: This is a population-based cohort study. Participants who had available data on early-life factors-namely maternal smoking around birth, being breastfed as a baby, and being one of a multiple birth and without IBS at the time of recruitment in UK Biobank-were included.

Results: Among a total of 334,586 subjects, 93,908 (28.07%) were exposed to maternal smoking around birth, 243,778 (72.86%) were breastfed as a baby, and 7,551 (2.26%) were part of a multiple birth. During a median follow-up of 13.58 years, 7,254 participants developed IBS, at a median age of 63 years. The hazard ratios of IBS were 1.22 [95% confidence interval (CI), 1.16-1.28, P <0.001], 0.92 (95% CI, 0.87-0.97, P =0.002), and 1.22 (95% CI, 1.06-1.40, P =0.006) for maternal smoking, breastfeeding, and multiple birth, respectively. The joint effect of any two of these three factors was related to added influence instead of interaction between them. The effect of maternal smoking on IBS was modified by age, while the modifiers of the effect of being breastfed as a baby on IBS were the age and sex of the offspring.

Conclusions: Participants exposed to maternal smoking around birth and being one of a multiple birth had a higher risk of IBS in middle-aged and elderly stages, while being breastfed as a baby had a protective effect against IBS. Future efforts should be made to validate the results.

背景:我们旨在通过英国生物银行的数据,调查三种围产期早期生活因素与中老年人肠易激综合征(IBS)风险之间的关系。方法:这是一项基于人群的队列研究。在英国生物银行招募时,有早期生活因素数据的参与者——即母亲在分娩时吸烟,婴儿时母乳喂养,多胞胎之一,没有肠易激综合征——被包括在内。结果:在334,586名受试者中,93,908名(28.07%)在分娩前后暴露于母亲吸烟,243,778名(72.86%)在婴儿时期接受母乳喂养,7,551名(2.26%)是多胎分娩的一部分。在平均13.58年的随访期间,7254名参与者发展为肠易激综合征,平均年龄为63岁。母亲吸烟、母乳喂养和多胞胎的IBS风险比分别为1.22(95%可信区间,1.16 ~ 1.28,P 0.001)、0.92 (95% CI, 0.87 ~ 0.97, P = 0.002)和1.22 (95% CI, 1.06 ~ 1.40, P = 0.006)。这三个因素中的任何两个的联合效应都与附加影响有关,而不是它们之间的相互作用。母亲吸烟对肠易激综合征的影响受年龄的影响,而婴儿时期母乳喂养对肠易激综合征影响的调节因素是后代的年龄和性别。结论:在分娩前后暴露于母亲吸烟和多胞胎的参与者在中老年阶段患IBS的风险更高,而在婴儿时期接受母乳喂养对IBS有保护作用。今后应努力验证这些结果。
{"title":"Association of maternal smoking, breastfeeding, and multiple birth with irritable bowel syndrome in older adults: a UK Biobank cohort study.","authors":"Xinyang Liu, Ruilang Lin, Xinyue Li, Mengjiang He, Yanbo Liu, Jianwei Hu, Weifeng Chen, Quanlin Li, Yongfu Yu, Pinghong Zhou","doi":"10.1093/gastro/goaf042","DOIUrl":"10.1093/gastro/goaf042","url":null,"abstract":"<p><strong>Background: </strong>We aimed to investigate associations between three perinatal early-life factors and the risk of irritable bowel syndrome (IBS) in middle-aged and elderly people by using data from UK Biobank.</p><p><strong>Methods: </strong>This is a population-based cohort study. Participants who had available data on early-life factors-namely maternal smoking around birth, being breastfed as a baby, and being one of a multiple birth and without IBS at the time of recruitment in UK Biobank-were included.</p><p><strong>Results: </strong>Among a total of 334,586 subjects, 93,908 (28.07%) were exposed to maternal smoking around birth, 243,778 (72.86%) were breastfed as a baby, and 7,551 (2.26%) were part of a multiple birth. During a median follow-up of 13.58 years, 7,254 participants developed IBS, at a median age of 63 years. The hazard ratios of IBS were 1.22 [95% confidence interval (CI), 1.16-1.28, <i>P </i><<i> </i>0.001], 0.92 (95% CI, 0.87-0.97, <i>P </i>=<i> </i>0.002), and 1.22 (95% CI, 1.06-1.40, <i>P </i>=<i> </i>0.006) for maternal smoking, breastfeeding, and multiple birth, respectively. The joint effect of any two of these three factors was related to added influence instead of interaction between them. The effect of maternal smoking on IBS was modified by age, while the modifiers of the effect of being breastfed as a baby on IBS were the age and sex of the offspring.</p><p><strong>Conclusions: </strong>Participants exposed to maternal smoking around birth and being one of a multiple birth had a higher risk of IBS in middle-aged and elderly stages, while being breastfed as a baby had a protective effect against IBS. Future efforts should be made to validate the results.</p>","PeriodicalId":54275,"journal":{"name":"Gastroenterology Report","volume":"13 ","pages":"goaf042"},"PeriodicalIF":3.8,"publicationDate":"2025-06-11","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12158159/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144276649","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Current and new strategies for hepatocellular carcinoma surveillance. 当前和新的肝细胞癌监测策略。
IF 3.8 3区 医学 Q2 GASTROENTEROLOGY & HEPATOLOGY Pub Date : 2025-06-06 eCollection Date: 2025-01-01 DOI: 10.1093/gastro/goaf045
Natchaya Polpichai, Chongkonrat Maneenil, Pojsakorn Danpanichkul, Chitchai Rattananukrom, Ashok Choudhury, Yu Jun Wong, Pimsiri Sripongpun, Suthat Liangpunsakul, Apichat Kaewdech

Hepatocellular carcinoma (HCC) remains a leading cause of cancer-related mortality worldwide, particularly among individuals with chronic liver diseases. Early detection through surveillance significantly improves survival rates and current guidelines recommend semiannual ultrasound, with or without alpha-fetoprotein (AFP) testing, for high-risk populations. However, limitations in ultrasound sensitivity, physician adherence, and patient compliance affect the effectiveness of these surveillance efforts. This review explores both current and emerging strategies for HCC surveillance. Individualized surveillance approaches, utilizing risk stratification tools such as the aMAP and PAGE-B scores, enable tailored monitoring based on individual risk profiles, potentially reducing unnecessary screening in low-risk groups. Advanced imaging techniques, including contrast-enhanced ultrasound and abbreviated magnetic resonance imaging, demonstrate improved sensitivity over traditional ultrasound, particularly for early-stage HCC detection. Additionally, combining clinical characteristics with novel HCC biomarkers-such as the Gender, Age, AFP-L3, AFP, and Des-gamma-carboxy prothrombin (GALAD) score; HCC early detection screening score version 2 (HES V2.0) score; Gender, Age, AFP, and Des-gamma-carboxy prothrombin (GAAD) score; and AFP, Sex, Age, and Protein induced by vitamin K absence-II (ASAP) score-has shown higher sensitivity for early detection, with GALAD and HES V2.0 performing particularly well in phase 3 biomarker studies. Emerging molecular diagnostics, including liquid biopsy and genetic markers, also show promise in refining future HCC surveillance protocols. Despite these advancements, a limited number of at-risk patients currently undergo surveillance. Therefore, solutions must focus on enhancing awareness, adherence, and accessibility to surveillance tools. This review discusses various strategies for optimizing HCC surveillance, emphasizing a multifaceted approach that integrates risk-assessment tools, advanced imaging, and novel biomarkers to improve early detection and reduce mortality.

肝细胞癌(HCC)仍然是世界范围内癌症相关死亡的主要原因,特别是在慢性肝病患者中。通过监测进行早期发现可显著提高生存率,目前的指南建议高危人群每半年进行一次超声检查,可进行或不进行甲胎蛋白(AFP)检测。然而,超声敏感性、医生依从性和患者依从性的局限性影响了这些监测工作的有效性。本综述探讨了当前和新兴的HCC监测策略。个性化的监测方法,利用风险分层工具,如aMAP和PAGE-B评分,可以根据个人风险概况进行量身定制的监测,可能减少对低风险群体的不必要筛查。先进的成像技术,包括对比增强超声和缩短磁共振成像,显示出比传统超声更高的灵敏度,特别是在早期HCC检测方面。此外,将临床特征与新的HCC生物标志物(如性别、年龄、AFP- l3、AFP和des - γ -羧基凝血酶原(GALAD)评分)相结合;HCC早期检测筛查评分版本2 (HES V2.0)评分;性别、年龄、AFP、des - γ -羧基凝血酶原(GAAD)评分;和AFP,性别,年龄和蛋白质诱导的维生素K缺失- ii (ASAP)评分显示出更高的早期检测敏感性,GALAD和HES V2.0在3期生物标志物研究中表现特别好。新兴的分子诊断,包括液体活检和遗传标记,也显示出改善未来HCC监测方案的希望。尽管取得了这些进展,但目前接受监测的高危患者数量有限。因此,解决方案必须侧重于提高对监测工具的认识、依从性和可及性。本综述讨论了优化HCC监测的各种策略,强调了综合风险评估工具、先进成像和新型生物标志物的多方面方法,以提高早期发现和降低死亡率。
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引用次数: 0
Efficacy of the modified parallel method combined with the double-guide-wire technique for safer endoscopic ultrasound-guided hepaticogastrostomy. 改良平行法联合双导丝技术在超声内镜下肝胃造口术中的应用效果。
IF 3.8 3区 医学 Q2 GASTROENTEROLOGY & HEPATOLOGY Pub Date : 2025-06-06 eCollection Date: 2025-01-01 DOI: 10.1093/gastro/goaf048
Koichiro Mandai, Takato Inoue
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引用次数: 0
Clinical-radiomics models with machine-learning algorithms to distinguish uncomplicated from complicated acute appendicitis in adults: a multiphase multicenter cohort study. 临床放射组学模型与机器学习算法区分成人急性阑尾炎的简单和复杂:一项多阶段多中心队列研究。
IF 3.8 3区 医学 Q2 GASTROENTEROLOGY & HEPATOLOGY Pub Date : 2025-06-03 eCollection Date: 2025-01-01 DOI: 10.1093/gastro/goaf039
Li Li, Yangyang Sun, Yang Sun, Yunhe Gao, Benlong Zhang, Ruizhao Qi, Fugeng Sheng, Xiaodong Yang, Xu Liu, Lin Liu, Canrong Lu, Lin Chen, Kecheng Zhang

Increasing evidence suggests that non-operative management (NOM) with antibiotics could serve as a safe alternative to surgery for the treatment of uncomplicated acute appendicitis (AA). However, accurately differentiating between uncomplicated and complicated AA remains challenging. Our aim was to develop and validate machine-learning-based diagnostic models to differentiate uncomplicated from complicated AA. This was a multicenter cohort trial conducted from January 2021 and December 2022 across five tertiary hospitals. Three distinct diagnostic models were created, namely, the clinical-parameter-based model, the CT-radiomics-based model, and the clinical-radiomics-fused model. These models were developed using a comprehensive set of eight machine-learning algorithms, which included logistic regression (LR), support vector machine (SVM), random forest (RF), decision tree (DT), gradient boosting (GB), K-nearest neighbors (KNN), Gaussian Naïve Bayes (GNB), and multi-layer perceptron (MLP). The performance and accuracy of these diverse models were compared. All models exhibited excellent diagnostic performance in the training cohort, achieving a maximal AUC of 1.00. For the clinical-parameter model, the GB classifier yielded the optimal AUC of 0.77 (95% confidence interval [CI]: 0.64-0.90) in the testing cohort, while the LR classifier yielded the optimal AUC of 0.76 (95% CI: 0.66-0.86) in the validation cohort. For the CT-radiomics-based model, GB classifier achieved the best AUC of 0.74 (95% CI: 0.60-0.88) in the testing cohort, and SVM yielded an optimal AUC of 0.63 (95% CI: 0.51-0.75) in the validation cohort. For the clinical-radiomics-fused model, RF classifier yielded an optimal AUC of 0.84 (95% CI: 0.74-0.95) in the testing cohort and 0.76 (95% CI: 0.67-0.86) in the validation cohort. An open-access, user-friendly online tool was developed for clinical application. This multicenter study suggests that the clinical-radiomics-fused model, constructed using RF algorithm, effectively differentiated between complicated and uncomplicated AA.

越来越多的证据表明,抗生素非手术治疗(NOM)可作为非并发症急性阑尾炎(AA)治疗的安全替代方法。然而,准确区分简单和复杂的AA仍然具有挑战性。我们的目标是开发和验证基于机器学习的诊断模型,以区分简单和复杂的AA。这是一项多中心队列试验,于2021年1月至2022年12月在五家三级医院进行。建立了三种不同的诊断模型,即基于临床参数的模型,基于ct放射组学的模型和临床放射组学融合模型。这些模型是使用八种机器学习算法开发的,包括逻辑回归(LR)、支持向量机(SVM)、随机森林(RF)、决策树(DT)、梯度增强(GB)、k近邻(KNN)、高斯Naïve贝叶斯(GNB)和多层感知器(MLP)。比较了不同模型的性能和精度。所有模型在训练队列中均表现出优异的诊断性能,最大AUC为1.00。对于临床参数模型,在测试队列中,GB分类器的最佳AUC为0.77(95%置信区间[CI]: 0.64-0.90),而在验证队列中,LR分类器的最佳AUC为0.76 (95% CI: 0.66-0.86)。对于基于ct放射组学的模型,GB分类器在测试队列中获得了0.74 (95% CI: 0.60-0.88)的最佳AUC,而SVM在验证队列中获得了0.63 (95% CI: 0.51-0.75)的最佳AUC。对于临床-放射学融合模型,RF分类器在测试队列中的最佳AUC为0.84 (95% CI: 0.74-0.95),在验证队列中的最佳AUC为0.76 (95% CI: 0.67-0.86)。为临床应用开发了一个开放获取、用户友好的在线工具。这项多中心研究表明,使用射频算法构建的临床-放射学融合模型可以有效区分复杂和非复杂的AA。
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引用次数: 0
Alternative splicing: hallmark and therapeutic opportunity in metabolic liver disease. 选择性剪接:代谢性肝病的标志和治疗机会。
IF 3.8 3区 医学 Q2 GASTROENTEROLOGY & HEPATOLOGY Pub Date : 2025-05-26 eCollection Date: 2025-01-01 DOI: 10.1093/gastro/goaf044
Mingqian Jiang, Saleh A Alqahtani, Wai-Kay Seto, Yusuf Yilmaz, Ziyan Pan, Luca Valenti, Mohammed Eslam

Metabolic dysfunction-associated fatty liver disease (MAFLD) has become the leading cause of chronic liver disease worldwide, with fibrosis recognized as the main prognostic factor and therapeutic target. While early-stage fibrosis is reversible, advanced fibrosis poses a significant clinical challenge due to limited treatment options, highlighting the need for innovative management strategies. Recent studies have shown that alternative pre-mRNA splicing, a critical mechanism regulating gene expression and protein diversity, plays a fundamental role in the pathogenesis of MAFLD and associated fibrosis. Understanding the complex relationship between alternative splicing and fibrosis progression in MAFLD could pave the way for novel therapeutic approaches and improve clinical outcomes. In this review, we describe the intricate mechanisms of alternative splicing in fibrosis associated with MAFLD. Specifically, we explored the pivotal of splicing factors, and RNA-binding proteins, highlighting their critical interactions with metabolic and epigenetic regulators. Furthermore, we provide an overview of the latest advancements in splicing-based therapeutic strategies and biomarker development. Particular emphasis is placed on the potential application of antisense oligonucleotides for rectifying splicing anomalies, thereby laying the foundation for precision medicine approaches in the treatment of MAFLD-associated fibrosis.

代谢功能障碍相关脂肪性肝病(MAFLD)已成为世界范围内慢性肝病的主要病因,纤维化是公认的主要预后因素和治疗靶点。虽然早期纤维化是可逆的,但由于治疗方案有限,晚期纤维化构成了重大的临床挑战,突出了对创新管理策略的需求。最近的研究表明,替代前mrna剪接是调节基因表达和蛋白质多样性的关键机制,在MAFLD和相关纤维化的发病机制中起着重要作用。了解MAFLD中选择性剪接和纤维化进展之间的复杂关系可以为新的治疗方法和改善临床结果铺平道路。在这篇综述中,我们描述了与MAFLD相关的纤维化中选择性剪接的复杂机制。具体来说,我们探讨了剪接因子和rna结合蛋白的关键作用,强调了它们与代谢和表观遗传调控因子的关键相互作用。此外,我们还概述了基于剪接的治疗策略和生物标志物开发的最新进展。特别强调了反义寡核苷酸在纠正剪接异常方面的潜在应用,从而为精准医学方法治疗mafld相关纤维化奠定了基础。
{"title":"Alternative splicing: hallmark and therapeutic opportunity in metabolic liver disease.","authors":"Mingqian Jiang, Saleh A Alqahtani, Wai-Kay Seto, Yusuf Yilmaz, Ziyan Pan, Luca Valenti, Mohammed Eslam","doi":"10.1093/gastro/goaf044","DOIUrl":"10.1093/gastro/goaf044","url":null,"abstract":"<p><p>Metabolic dysfunction-associated fatty liver disease (MAFLD) has become the leading cause of chronic liver disease worldwide, with fibrosis recognized as the main prognostic factor and therapeutic target. While early-stage fibrosis is reversible, advanced fibrosis poses a significant clinical challenge due to limited treatment options, highlighting the need for innovative management strategies. Recent studies have shown that alternative pre-mRNA splicing, a critical mechanism regulating gene expression and protein diversity, plays a fundamental role in the pathogenesis of MAFLD and associated fibrosis. Understanding the complex relationship between alternative splicing and fibrosis progression in MAFLD could pave the way for novel therapeutic approaches and improve clinical outcomes. In this review, we describe the intricate mechanisms of alternative splicing in fibrosis associated with MAFLD. Specifically, we explored the pivotal of splicing factors, and RNA-binding proteins, highlighting their critical interactions with metabolic and epigenetic regulators. Furthermore, we provide an overview of the latest advancements in splicing-based therapeutic strategies and biomarker development. Particular emphasis is placed on the potential application of antisense oligonucleotides for rectifying splicing anomalies, thereby laying the foundation for precision medicine approaches in the treatment of MAFLD-associated fibrosis.</p>","PeriodicalId":54275,"journal":{"name":"Gastroenterology Report","volume":"13 ","pages":"goaf044"},"PeriodicalIF":3.8,"publicationDate":"2025-05-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12116422/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144175601","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
A novel detachable over-the-scope clip system for the management of esophageal inlet perforation secondary to endoscopic ultrasonography procedures. 一种新型可拆卸的镜外夹系统,用于内镜超声检查后食管入口穿孔的治疗。
IF 3.8 3区 医学 Q2 GASTROENTEROLOGY & HEPATOLOGY Pub Date : 2025-05-23 eCollection Date: 2025-01-01 DOI: 10.1093/gastro/goaf043
Benhua Wu, Lisheng Wang, Wenbiao Chen
{"title":"A novel detachable over-the-scope clip system for the management of esophageal inlet perforation secondary to endoscopic ultrasonography procedures.","authors":"Benhua Wu, Lisheng Wang, Wenbiao Chen","doi":"10.1093/gastro/goaf043","DOIUrl":"10.1093/gastro/goaf043","url":null,"abstract":"","PeriodicalId":54275,"journal":{"name":"Gastroenterology Report","volume":"13 ","pages":"goaf043"},"PeriodicalIF":3.8,"publicationDate":"2025-05-23","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12102062/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144144314","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
期刊
Gastroenterology Report
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