Journal of Zoological Systematics and Evolutionary Research最新文献

To reveal the phylogeographic pattern of the parthenogenetic psyllid Cacopsylla myrtilli (W. Wagner 1947) (Hemiptera, Psylloidea), we sequenced a 638 bp fragment of the mitochondrial COI gene from 962 individuals. These insects originated from 46 sampling sites, which cover a significant part of the northern Palearctic distribution range of the species. The sequence data revealed 40 haplotypes, with three main (H1, H2, and H3) and 37 derived ones. The main haplotypes H1 or H2 or both were present at all sampling sites. The star-like shape of the haplotype networks indicated recent population expansion. In most cases, the derived haplotypes were specific for each country, suggesting that the main haplotypes H1 and H2 are of refugial origin, and the derived haplotypes have emerged after the postglacial recolonization process. Based on the haplotype sequences, we suggest H3 to represent the ancestral haplotype from which H1 and H2 have evolved. We suggest that the main haplotype H3 together with its derived haplotypes represents bisexual C. myrtilli, which shows a limited distribution on both sides of the border between Finland and Russia in northern Fennoscandia. The genetic diversity was the highest in Sjoa in southern Norway and also high in the White Sea region in northwest Russia. Higher diversity in Sjoa was attributed to both earlier recolonizations compared to that of the White Sea region and the absence of Wolbachia infection. We suggest that these sites were colonized from different Pleistocene refugia, i.e., from western and eastern refugia, respectively. From the White Sea region, recolonization continued eastwards to Ural Mountains and westwards to Finland and further north to Kola Peninsula. From northern Finland, recolonization continued to Finnmark, Norway, and further to Sweden and finally reached a secondary contact zone with colonizers from Norway in Central Sweden. The Caucasus and Siberian/Manchurian refugial regions have played an important role in the origin of C. myrtilli populations in Siberia and the Russian Far East.

Shape morph-specific studies in hippolytid shrimps revealed significant results on their ecomorphology and evolutionary adaptations. Among the species of the genus Hippolyte, only one exhibits an unusual, sharp rostral dimorphism and has been used as an animal model for the investigation of mechanisms of the morph-specific adaptation: the intertidal Hippolyte sapphica. The species is endemic of the Central/Eastern Mediterranean basin and exhibits morph-A with a long dentate rostrum and morph-B with a short, juvenile-like one. The two morphotypes were recently confirmed to be conspecific, while offspring and morphological studies showed significant microevolutionary adaptations, which balance the disadvantage of the “rostral loss.” The present study aims to investigate the effect of such phenotypic variation on the reproductive traits of the species. We collected ovigerous females of H. sapphica in mixed (morph-A and morph-B) and unmixed populations (morph-A) along the species geographical range. We measured seven morphometric and maternal investment traits: carapace length, fecundity, embryo volume, egg density, female dry weight, brood dry weight, and reproductive output. Our results showed that ovigerous females were bigger in morph-A than in morph-B, whereas fecundity did not show any significant differences between the two morphotypes. High egg volume might be attributed to the latitudinal differences of our sampling sites compared to congenerics. Interestingly, the reproductive output was found to be bigger in morph-A specimens, suggesting that the maternal energy investment is selectively determined from the rostral presence/absence and the morphotype’s higher viability in the species populations.

Pin nematodes of the genus Paratylenchus comprise 140 species. This group of nematodes is characterized by a quite homogeneous morphology and cosmopolitan distribution and is prevalent in cultivated and natural soil ecosystems. The present study describes the first interactive and illustrated web-assisted polytomous identification key for the genus Paratylenchus. The updated Paratylenchus species polytomous key was based on a wide list of 24 diagnostic characters generated for the 140 species comprising this genus. Here we developed a web-assisted method to achieve an easy and accurate Paratylenchus species characterization that will greatly improve the identification of these plant-parasitic nematodes for many diagnostic laboratories and researchers. However, this identification needs to be completed with the use of molecular markers available for the species due to the existence of species complexes studied in former researches. This idea is pointed in the polytomous key in the specific species complexes up-to-know. In some cases, the presence in the soil as survival stage of few individuals in the fourth-stage juvenile (J4) required the use of molecular markers for species identification. We suggest the use of at least a fragment of mitochondrial COI gene for species identification or the combination of nuclear D2-D3 regions of the 28S rRNA and the COI to complement each marker. However, for some species complexes, the use of the D2-D3 regions alone has not enough resolution to separate the putative species inside the species complex. Web-based polytomous key was constructed using the free software Xper3, for computers and mobile devices (smartphones, tablets, and pocket PCS).

Animal biodiversity is greatly underestimated in nontemperate marine regions, especially for intertidal benthic organisms such as oysters. Recent surveys in the northern Arabian Gulf suggest the presence of numerous unidentified species, some of which form shallow reef ecosystems while others are cryptic and found under rocks. In this study, we focused on small oysters from Kuwait, which show typical characteristics in common with the genus Ostrea except for the presence of lophine chomata that would link it to the genera Lopha, Dendostrea, and Alectryonella. Phylogenetic analyses based on mitochondrial and nuclear markers unambiguously placed the Kuwait oyster within the Ostreinae as a sister to the Japanese species Ostrea futamiensis. The hypothesis that the Kuwait oyster represents a new species was assessed with phylogenetic and species delimitation methods combined with a morphological assessment. Results corroborated the Kuwait oysters as a new species herein described as Ostrea oleomargarita Oliver, Salvi, and Al-Kandari, sp. nov. The phylogeny of the Ostreinae shows extensive disagreement between morphology-based genera and phylogenetic clades. The genus Ostrea is polyphyletic, and the form and distribution of taxonomic characters such as chomata are not as definitive as suggested in previous studies. This study, along with other recent investigations, confirmed the Arabian Gulf as a key region for discovering marine animal diversity and suggested a possible biogeographic divide between the Eastern and Western Indo-Pacific. A pattern that has been documented in a growing number of taxa and that warrants further research attention.

Acari harbor numerous minute species of agricultural economic importance, mainly Tetranychidae and Phytoseiidae. Great efforts have been established by means of recovering morphological, molecular, and phylogenetic traits for species identification. Traditional identification still relies on external diagnostic characters, which are limited and usually exhibit large phenotypic plasticity within the species, rendering them useless for species delimitation and identification. We decided to increase the number of sequences of the Acari mitochondrial COI (Cytochrome C oxidase I) marker and ITS nuclear ribosomal DNA region for species identification in Tetranychidae and Phytoseiidae. The molecular data allow us to establish species boundaries and phylogenetic relationships among several clades of Acari, mainly Tetranychidae and Phytoseiidae. Sequence comparisons between complete COI and the Acari mitochondrial COI, ITS1-5,8S-ITS2, and ITS2 among all Acari sequences have demonstrated that the selected regions, even small, gave enough informative positions for both species’ identification and phylogenetic studies. Analyses of both DNA regions have unveiled their use as species identification characters, with special emphasis on Acari mitochondrial COI for Tetranychidae and Phytoseiidae species in comparison with the Folmer fragment, which has been universally used as a barcode marker. We demonstrated that the Acari mitochondrial COI region is also a suitable marker to establish a barcode dataset for Acari identification. Our phylogenetic analyses are congruent with other recent works, showing that Acari is a monophyletic group, of which Astigmata, Ixodida, Mesostigmata, Oribatida, and Prostigmata are also monophyletic.

Leonardo Fea, an Italian explorer and traveler, sampled a comprehensive collection of continental Mollusca during his travels throughout the former British Burma (currently Myanmar) in 1885-1887. Cesare Maria Tapparone-Canefri, an Italian malacologist, studied this sample and published a paper with a description of numerous terrestrial and freshwater molluscan taxa new to science. This collection was partly deposited in the Museo Civico di Storia Naturale di Genova (MSNG), Italy and the Indian Museum (ZSI: Zoological Survey of India) in Kolkata. Here, we provide a re-analysis of C.M. Tapparone-Canefri’s Burmese Unionidae collection. Our study reveals that the type series of only four nominal taxa described by Tapparone-Canefri as new to science in 1889 are still available in the MSNG, i.e. Unio rectangularis, U. pulcher, U. protensus var. obtusatus, and U. marginalis var. subflabellata. The first taxon is a valid species belonging to the genus Yaukthwa, while U. pulcher and U. protensus var. obtusatus are considered here as junior synonyms of the widespread Lamellidens generosus, and the last nominal taxon corresponds to L. savadiensis. The MSNG collection also contains shell lots of Indochinella pugio pugio, I. pugio paradoxa, Indonaia andersoniana, Radiatula chaudhurii, R. mouhoti haungthayawensis, Lamellidens savadiensis, L. generosus, Yaukthwa nesemanni, and Y. zayleymanensis, most of which were listed in Tapparone-Canefri’s work under incorrect names. We revise all the freshwater mussel taxa listed by Tapparone-Canefri based on the original descriptions, available DNA sequences, morphological data, and biogeographic evidence. A freshwater mussel from the Haungthayaw River that was identified by Tapparone-Canefri as Unio exolescens is described here as Trapezoideus mitanensis sp. nov., a fourth species in this small Contradentini genus with a restricted range. Finally, new taxonomic opinions are proposed here for Leoparreysia tavoyensis, Trapezidens dolichorhynchus, Lamellidens generosus, and Lamellidens savadiensis.

The study of avian species diversity and abundance at the Taunsa Barrage Ramsar site was carried out from September 2019 to March 2020. Taunsa Barrage is an important wetland for international and local migratory birds, including waterfowls, waders, and long-distance migrant avifauna. Data were collected by direct counts made on four-point transects representing a disturbance gradient due to humans and different habitats. Species diversity indices, analysis of variance (ANOVA), and other statistical methods were used to analyze data. A total of 150 avian species of 19 orders and 53 families were recorded. These included 66 migrant species and 84 resident species. The spotting of ten globally threatened species also highlights the importance of wetland for avian species. On average, 1511 ± 373 (mean ± SD) species of birds were recorded every month. Shannon’s diversity index indicated that Transect Point 2 had higher species diversity (H^′ = 3.779), followed by Transect Points 3, 4, and 1 (H^′ = 3.769, H^′ = 3.491, and H^′ = 3.457, respectively). Evenness index showed that birds evenly distributed in September (E = 0.5584) than November (E = 0.3109). ANOVA showed a significant difference (F = 4.800, df = 3, P = 0.002) of avian diversity and abundance among the transect points. But there was no statistically significant interaction between months (F = 1.23, df = 6, P = 0.233). The results showed that the Taunsa Barrage Ramsar site harbors plenty of resident migratory and threatened bird species. Hence, it is important to protect its habitat and need to protect avian diversity by overcoming major threats.

Species with large distributions provide unique opportunities to test how geography has influenced biotic diversification. In this work, we aimed to explore the effect of geographic barriers on the distribution of the phenotypic and genetic variation of a spider species that is widespread in continental and insular America. We obtained an alignment of the mitochondrial locus Cytochrome Oxidase I (COI) for 408 individuals across the geographic range of Gasteracantha cancriformis. We used phylogenetics, population genetics, and morphology to explore the genetic and phenotypic variation of this species. We found five genetically differentiated and geographically structured populations. Three of them are distributed in continental America, separated by the Andes mountains, and two are in the Caribbean and Galapagos Islands. Some of these geographic clades shared haplotypes between them, which may be a consequence of dispersal. We detected at least 20 phenotypes of G. cancriformis, some of which were exclusive to a geographic region, while others occurred in multiple regions. We did not observe well-defined morphological differences across male genitalia. This evidence suggests that G. cancriformis is a widespread species with high phenotypic variation that should be explored in more depth.

The complex topography of the species-rich northern Andes creates heterogeneous environmental landscapes that are hypothesized to have promoted population fragmentation and diversification by processes such as vicariance or local adaptation. Previous phylogenetic work on the palm rocket frog (Anura: Aromobatidae: Rheobates spp.), endemic to midelevation forests of Colombia, suggested that valleys were important in promoting divergence between lineages. In this study, we first evaluated previous hypotheses of species-level diversity, then fitted an isolation-with-migration (IM) historical demographic model, and tested two landscape genetic models to explain genetic divergence within Rheobates: isolation by distance and isolation by environment. The data consisted of two mitochondrial and four nuclear genes from 24 samples covering most of the geographic range of the genus. Species delimitation by Bayesian Phylogenetics and Phylogeography recovered five highly divergent genetic lineages within Rheobates, among which few to no migrants are exchanged according to IM. We found that isolation by environment provided the only variable significantly correlated with genetic distances for both mitochondrial and nuclear genes, suggesting that local adaptation may have a role in driving the genetic divergence within this frog genus. Thus, genetic divergence in Rheobates may be driven more by variation among the local environments where these frogs live rather than by geographic distance.