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Taxonomy of Croton flavens (Euphorbiaceae), a Caribbean Endemic, and a Preliminary Subsectional Classification of Croton section Adenophylli 加勒比地区特有种——巴豆黄属(大戟科)的分类和巴豆节腺的初步亚分类
IF 0.4 4区 生物学 Q4 BIODIVERSITY CONSERVATION Pub Date : 2021-12-20 DOI: 10.18475/cjos.v51i2.a14
Benjamin W. van Ee, P. Berry
Abstract Croton flavens shares a general morphology with multiple species throughout Croton section Adenophylli, which has complicated the application of names to these taxa. We generated nuclear (ITS) and chloroplast (trnL-F) phylogenies of C. sect. Adenophylli in order to identify the phylogenetic placement of C. flavens and morphologically similar species. Based on these phylogenies, we recognize six subsections within the section, two of which (C. subsects. Adenophylli and Velamea) required new combinations, three others (C. subsects. Caribaeus, Laceratoglandulosus, and Meridionalis) are newly described, and one (C. subsect. Pungentes) was previously described. Croton flavens is restricted to the islands of the West Indies, extending from the Bahamas to Trinidad, but absent from the Leeward Antilles. It appears to be rare at the extremes of its range in the Bahamas and Trinidad, but otherwise it is often a ubiquitous member of dry, shrubby vegetation of many Caribbean islands. Within C. flavens we recognize a widespread typical variety and C. flavens var. pallidus from Hispaniola and Cuba.
摘要Croton flavens在整个Croton剖面中与多个物种有着共同的形态,这使这些分类群的名称应用变得复杂。我们生成了C.sect的细胞核(ITS)和叶绿体(trnL-F)系统发育。以确定黄曲霉和形态相似物种的系统发育位置。基于这些系统发育,我们在该部分中识别出六个亚区,其中两个亚区(C.subsects.Adenophili和Velamea)需要新的组合,另外三个亚区是新描述的(C.subscts.Caribaeus、Laceratoglandulosus和Meridionalis),其中一个亚区先前描述过(C.subsect.Pungentes)。Croton flavens仅限于西印度群岛的岛屿,从巴哈马延伸到特立尼达,但背风安的列斯群岛没有。在巴哈马和特立尼达的极端地区,它似乎很罕见,但除此之外,它通常是许多加勒比岛屿干燥灌木状植被中无处不在的一员。在C.flavens中,我们认识到一个广泛的典型品种,即来自伊斯帕尼奥拉岛和古巴的C.flavens.pallidus变种。
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引用次数: 2
DNA Barcoding of Adiantum (Pteridaceae: Vittarioideae) in Puerto Rico 波多黎各铁线蕨(Pteridae:Vittarioidee)的DNA条形码
IF 0.4 4区 生物学 Q4 BIODIVERSITY CONSERVATION Pub Date : 2021-12-20 DOI: 10.18475/cjos.v51i2.a13
Karlyn Grafals Nieves, Benjamin W. van Ee
Abstract We used the chloroplast markers trnL-F and rbcL to construct a DNA barcode sequence library of Adiantum (Pteridaceae) from Puerto Rico. By conducting BLAST searches, the trnL-F marker was able to successfully determine specimens of six out of 10 species for which data were generated, and failed for four. For the nine species for which rbcL sequences were obtained, the BLAST search method was successful for three, partially successful for three, and a failure for three. Phylogenetic analyses of both markers were able to resolve and distinguish all sampled taxa, with the exception that sequences of A. latifolium and A. ×variopinnatum were recovered as an unresolved polytomy with A. petiolatum nested within it. The molecular data indicate that what has previously been determined as A. pyramidale on Jamaica, Cuba, Hispaniola, and Puerto Rico likely represents at least two distinct species, based on data from Cuba and Puerto Rico. We also report the presence of A. ×variopinnatum on Puerto Rico for the first time.
摘要我们利用叶绿体标记trnL-F和rbcL构建了波多黎各铁线蕨属(Pteridae)的DNA条形码序列库。通过BLAST搜索,trnL-F标记能够成功地确定10个物种中的6个,但有4个失败。对于获得rbcL序列的九个物种,BLAST搜索方法对三个成功,对三个部分成功,三个失败。这两个标记的系统发育分析都能够解析和区分所有采样的分类群,除了宽叶A.latifolium和×vario羽状茎A.vario羽状体的序列被恢复为一个未解决的多体,其中嵌套着海鞘A.petiolatum。分子数据表明,之前在牙买加、古巴、伊斯帕尼奥拉岛上被确定为金字塔A.pyramidale的,根据古巴和波多黎各的数据,波多黎各可能代表了至少两个不同的物种。
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引用次数: 1
Spatial Ecology of Invasive Predatory Species Informs Predator Control Program for the Jamaican Rock Iguana (Cyclura collei) 入侵掠食性物种的空间生态学为牙买加岩鬣蜥(Cyclura collei)的捕食者控制计划提供信息
IF 0.4 4区 生物学 Q4 BIODIVERSITY CONSERVATION Pub Date : 2021-12-13 DOI: 10.18475/cjos.v51i2.a11
Kirtana Kumar, S. Pasachnik, D. Reid, A. Harmer
Abstract Extinctions and population decline of species on islands are often attributed to invasive alien species (IAS). Predation from IAS, such as the Small Indian Mongoose (Urva auropunctata) drove the Critically Endangered Jamaican Rock Iguana (Cyclura collei) to near extinction. Historical and ongoing conservation efforts have restored the population to 500 to 600 adults today. Despite intensive control, IAS incursions into the core area remain common, preventing natural population recruitment. To improve our management and understanding of IAS, we investigated IAS spatial use within the range of the Jamaican Rock Iguana. Seventeen mongooses and cats were tracked with Very High Frequency (VHF) and Global Positioning System (GPS) transmitters for up to 72 days. Several spatial analyses were performed for all IAS, and home ranges were calculated for 13 individuals. Average 100% Minimum Convex Polygon (MCP) home range for VHF tracked mongoose and cats were 25.7 ha and 23.9 ha, respectively. Average 100% MCP, 95% Kernel Density Estimate (KDE), and 50% KDE home range estimates for GPS tracked cats were 78.2 ha, 80.3 ha, and 21.6 ha, respectively. Average IAS range length (distance between the two farthest points) was 979.2 m. Tracking tunnels were also utilized and revealed nearly equal numbers of mongoose tracks inside and outside the iguana core zone. Our results suggest the use of 100 m grid spacing for traps and the introduction of a buffer zone surrounding the core protected zone to restrict IAS incursions. The suggested modifications are expected to mitigate the effects of IAS on the Jamaican Rock Iguana population, improve hatchling survival, and facilitating natural population recruitment and growth.
摘要外来入侵物种(IAS)是导致岛屿物种灭绝和数量下降的主要原因。小印度猫鼬(Urva auropunctata)等来自IAS的捕食使极度濒危的牙买加岩鬣蜥(Cyclura collei)濒临灭绝。历史和正在进行的保护工作使今天的成年大熊猫数量恢复到500到600只。尽管进行了严密的控制,国际入侵组织对核心地区的入侵仍然很常见,阻碍了自然人口的补充。为了提高我们对IAS的管理和理解,我们调查了牙买加岩鬣蜥范围内IAS的空间使用情况。研究人员用甚高频(VHF)和全球定位系统(GPS)发射器对17只猫鼬和猫进行了长达72天的跟踪。对所有IAS进行了一些空间分析,并计算了13个人的家乡范围。VHF跟踪猫鼬和猫的平均100%最小凸多边形(MCP)范围分别为25.7公顷和23.9公顷。GPS追踪猫的平均100% MCP、95%核密度估计(KDE)和50% KDE家庭范围估计分别为78.2 ha、80.3 ha和21.6 ha。IAS的平均距离长度(两个最远点之间的距离)为979.2 m。追踪隧道也被利用,在鬣蜥核心区内外发现了几乎相同数量的猫鼬踪迹。我们的研究结果建议使用100米的网格间隔设置陷阱,并在核心保护区周围引入缓冲区来限制IAS的入侵。建议的修改有望减轻IAS对牙买加岩鬣蜥种群的影响,提高孵化存活率,并促进自然种群的补充和增长。
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引用次数: 1
Surficial and Shallow Subsurface Geology of the Northern and Central Exuma Cays, The Bahamas 巴哈马群岛北部和中部埃克苏马礁的地表和浅层地下地质
IF 0.4 4区 生物学 Q4 BIODIVERSITY CONSERVATION Pub Date : 2021-12-13 DOI: 10.18475/cjos.v51i2.a12
P. Hearty, J. Backstrom
Abstract The surface and subsurface geology of the Exuma Cays in the central Bahama Islands records sea-level cyclicity that extends back to the Jurasssic, however the focus of this paper is the Plio-Pleistocene, since approximately 1–3 million years ago. During the 1990s, the first author surveyed a large number of the islands by boat, mapped the geology on 1:25,000 topographic maps with the aid of air photos, and more recently complemented these mapping studies using Google Earth Pro. In 1994, two 33 m cores were extracted from Norman's Pond Cay and Lee Stocking Island in the southern group of the Exuma Cays. The outcropping rocks throughout the Cays are characterized by a mix of nearly pure bioclastic and oolitic sediments and limestone units. Generally, the highstand limestone deposits are capped with lowstand terra rossa paleosols, red-stained micritic limestone, calcrete, or karst surfaces. From surface and subsurface geology, a minimum of seven stratigraphic units are recorded, yet many cycles are obviously missing. Three broad eustatic intervals are evident from the δ18O record. These are associated with the Pliocene-early Pleistocene (“PP” >1.2 Ma), Mid-Pleistocene Transition (“MPT” ∼1.2–0.7 Ma), and the mid-late Pleistocene (“MLP” ∼0.7 Ma to present). A combination of physical stratigraphy, geomorphology, paleomagnetism, and amino acid racemization (AAR) provide a general age framework for these deposits. Pliocene beds at -25 m in only one core appear to indicate slow subsidence of the Bahama Banks. An interval of prolonged bank marginal or lower sea stands of the MPT are indicated by a cluster of dense, clayey red paleosols. Many MLP rocks on the islands and in the cores retain sufficient amino acids to establish a relative chronology for the MLP. The geomorphic and stratigraphic succession from the Exumas shows very rapid progradation of the over-steepened bank margin toward Exuma Sound by several km since the Plio-Pleistocene. The purpose of this paper is to: 1) characterize the geology of the existing Exuma rocks and cays; 2) demonstrate the shallow-subsurface stratigraphy in two 33-m long cores; and 3) provide some examples of how the Exuma Cays and their margins have evolved over the past 1–3 million years.
巴哈马群岛中部Exuma Cays的地表和地下地质记录了可追溯到侏罗纪的海平面旋回,但本文的重点是大约1-3百万年前的上新世-更新世。在20世纪90年代,第一作者乘船调查了大量岛屿,借助航空照片在1:25 000地形图上绘制了地质地图,最近使用谷歌Earth Pro补充了这些测绘研究。1994年,在Exuma Cays南部群的Norman's Pond Cay和Lee Stocking Island提取了两个33米的岩心。整个Cays的露头岩石的特点是混合了几乎纯的生物碎屑和鲕粒沉积物和石灰岩单元。一般来说,高地灰岩矿床被低地红土古土壤、红色泥晶灰岩、钙质或喀斯特表面覆盖。从地表和地下地质情况来看,至少记录了7个地层单位,但许多旋回明显缺失。从δ18O记录中可以明显看出三个较宽的上升间隔。它们与上新世-早更新世(“PP”>1.2 Ma),中更新世过渡(“MPT”~ 1.2 - 0.7 Ma)和中晚更新世(“MLP”~ 0.7 Ma至今)有关。物理地层学、地貌学、古地磁学和氨基酸消旋作用(AAR)相结合,提供了这些矿床的一般年龄框架。只有一个岩心在-25米处的上新世地层似乎表明了巴哈马海岸的缓慢下沉。一组致密的粘土红色古土壤表明了MPT的一段延长的岸缘或较低的海陷。岛上和岩心中的许多MLP岩石保留了足够的氨基酸来建立MLP的相对年代学。埃克苏马的地貌和地层演替表明,自上新世以来,埃克苏马的陡坡岸缘向埃克苏马海峡方向快速推进了数公里。本文的目的是:1)对埃克苏马现有岩石和粘土的地质特征进行表征;2)在两个33 m长的岩心中展示浅层地下地层;3)提供一些例子,说明埃克苏马礁及其边缘在过去的1-3百万年中是如何进化的。
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引用次数: 0
Direct Economic Inputs from Internationally Funded Science Projects to the Abaco Islands, The Bahamas 国际资助的科学项目对巴哈马阿巴科群岛的直接经济投入
IF 0.4 4区 生物学 Q4 BIODIVERSITY CONSERVATION Pub Date : 2021-12-06 DOI: 10.18475/cjos.v52i1.a2
C. Layman, Olivia Patterson Maura, S. Giery, Jacob E. Allgeier, A. Rypel
Abstract International expenditures for scientific research are important for small island developing nations, especially for those local communities that directly support research activities. We used the Abaco Islands, The Bahamas, as a case study to quantify the direct monetary inputs to a local economy via internationally funded scientific research. We found that over two years the external monetary influx was $995,310, via 24 research teams, spent across diverse business sectors on Abaco Island. A direct survey approach ensured this was a conservative estimate, leaving out numerous indirect economic impacts, thereby suggesting the actual monetary infusion was significantly higher. The highest expenditures were for services (e.g., local salaries and boat guides), lodging, food/drink, and major equipment (e.g., vehicles). While we do not have data from research teams working on other islands, significant research expenditures are made elsewhere in The Bahamas, including through government-sponsored efforts, environmentally-focused non-governmental organizations, and research centers. In addition to the research-based contributions that give rise to conservation and management decision-making, scientific activity brings benefits through the injection of money into local island economies. This relationship warrants study at larger regional scales, including across The Bahamas archipelago.
科学研究的国际支出对小岛屿发展中国家非常重要,特别是对那些直接支持研究活动的当地社区。我们以巴哈马的阿巴科群岛为例,通过国际资助的科学研究,量化对当地经济的直接货币投入。我们通过24个研究小组发现,在两年多的时间里,外部货币流入为995,310美元,用于阿巴科岛不同的商业部门。直接调查方法确保了这是保守估计,忽略了许多间接的经济影响,从而表明实际的货币注入要高得多。开支最多的是服务(例如当地薪金和船导游)、住宿、食品/饮料和主要设备(例如车辆)。虽然我们没有在其他岛屿工作的研究小组的数据,但巴哈马其他地方的研究支出很大,包括通过政府资助的努力、以环境为重点的非政府组织和研究中心。除了产生保护和管理决策的基于研究的贡献之外,科学活动还通过向当地岛屿经济注入资金而带来好处。这种关系值得在更大的区域尺度上进行研究,包括整个巴哈马群岛。
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引用次数: 0
Statistical Methods Used in Research Concerning Endangered and Threatened Animal Species of Puerto Rico: a Meta-study 统计方法在波多黎各濒危和受威胁动物物种研究中的应用:一项元研究
IF 0.4 4区 生物学 Q4 BIODIVERSITY CONSERVATION Pub Date : 2021-11-03 DOI: 10.18475/cjos.v51i2.a10
Sebastian J. Rivera, K. Alpi, J. Collazo, M. Stoskopf
Abstract A concern about statistics in wildlife studies, particularly of endangered and threatened species, is whether the data collected meet the assumptions necessary for the use of parametric statistics. This study identified published papers on the nine endangered and six threatened species found only on Puerto Rico using five different databases. The results from the Zoological Record database identified the most articles, including all identified by the other databases. Of the 222 identified articles, 108 included some form of statistics, 26 used only descriptive statistics, 34 included only parametric statistics, 26 used only nonparametric statistics, and 22 reported both parametric and nonparametric statistical analyses. This meta-study showed that the percentage of articles with no statistical treatment decreased in the most recent 20 years, and that although parametric statistics continue to be the most commonly used in published wildlife studies of Puerto Rican wildlife, there has been a distinct increase in the use of nonparametric statistics over time.
在野生动物研究中,特别是濒危和受威胁物种的统计研究中,一个值得关注的问题是所收集的数据是否满足使用参数统计所需的假设。这项研究利用5个不同的数据库,确定了仅在波多黎各发现的9种濒危物种和6种受威胁物种的发表论文。来自Zoological Record数据库的结果确定了最多的文章,包括所有其他数据库确定的文章。在222篇确定的文章中,108篇包括某种形式的统计,26篇仅使用描述性统计,34篇仅使用参数统计,26篇仅使用非参数统计,22篇同时报告了参数和非参数统计分析。这项荟萃研究表明,在最近20年中,未进行统计处理的文章百分比有所下降,尽管参数统计仍然是波多黎各野生动物研究中最常用的方法,但随着时间的推移,非参数统计的使用明显增加。
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引用次数: 0
In Memoriam: Paul Yoshioka (1945–2021) 纪念:保罗·吉冈(1945–2021)
IF 0.4 4区 生物学 Q4 BIODIVERSITY CONSERVATION Pub Date : 2021-10-26 DOI: 10.18475/cjos.v51i2.a9
D. Ballantine, R. Appeldoorn, N. E. Aponte
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引用次数: 0
The Mastofauna of Banco Chinchorro Atoll, Mexico 墨西哥Chinchoro环礁银行的Mastofauna
IF 0.4 4区 生物学 Q4 BIODIVERSITY CONSERVATION Pub Date : 2021-10-22 DOI: 10.18475/cjos.v51i2.a8
P. Charruau
Abstract Banco Chinchorro Atoll, the largest atoll in the Caribbean and Mexico, was declared a biosphere reserve due to its cultural, economic, and biological importance. The diversity of fish, birds, and reptiles in its aquatic and terrestrial environments has been well studied. However, knowledge about its richness in mammals is scarce and the existing information has not been synthesized to date. The objective of this work is therefore to search and review the existing literature on the mammals of Banco Chinchorro, and to present a first synthesis on the mastofauna of the atoll. Thirty documents mentioning mammals at Banco Chinchorro were found, from which eight species were identified. Of these, three species were invasive and have been eradicated, one native species became extinct, and four native species still occur in the reserve, two bats and two cetaceans. With these four mammal species, the number of known vertebrates at Banco Chinchorro is now 360. More research on the mammals of Banco Chinchorro is needed to increase the knowledge of the ecology and the population status of the species present in the area. It is also very likely that other species of bats and cetaceans are present in the reserve.
加勒比和墨西哥最大的环礁Banco Chinchoro环礁因其文化、经济和生物重要性而被宣布为生物圈保护区。鱼类、鸟类和爬行动物在水生和陆地环境中的多样性已经得到了很好的研究。然而,关于其在哺乳动物中的丰富性的知识很少,现有信息迄今尚未综合。因此,这项工作的目的是检索和审查Banco Chinchoro哺乳动物的现有文献,并首次对环礁的乳突动物群进行综合研究。在Banco Chinchoro发现了30份提及哺乳动物的文件,其中确定了8个物种。其中,三个物种是入侵物种,已被根除,一个本土物种灭绝,保护区内仍有四个本土物种,两个蝙蝠和两个鲸目动物。有了这四种哺乳动物,Banco Chinchoro已知的脊椎动物数量现在是360种。需要对Banco Chinchoro的哺乳动物进行更多的研究,以增加对该地区物种生态学和种群状况的了解。保护区内也很可能存在其他种类的蝙蝠和鲸目动物。
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引用次数: 1
A Morphometric Assessment of Non-indigenous Populations of Pterygoplichthys pardalis (Pisces, Loricariidae) in Jamaica 牙买加pardalis Pterygoplichthys非本地种群的形态计量学评价
IF 0.4 4区 生物学 Q4 BIODIVERSITY CONSERVATION Pub Date : 2021-10-22 DOI: 10.18475/cjos.v51i2.a7
Aisha Bailey, E. Hyslop
Abstract A morphometric investigation of suckermouth catfish specimens collected from the Upper and Lower Morass of Black River, St. Elizabeth, Jamaica was conducted between June 2007 and May 2008. Descriptions of 39 morphometric and 15 meristic measures are given. Taxonomic assessment through the application of dichotomous keys, photographic identification, and comparison with other morphometric work on similar species, identified the loricariid as Pterygoplichthys pardalis (Pisces, Loricariidae). Further analysis revealed that populations of P. pardalis in the Upper Morass have relatively longer heads, longer snouts, longer and deeper caudal penduncles, and deeper dorsal fins compared with individuals from the Lower Morass. Principal Component Analysis (PCA) showed no distinct groups of P. pardalis occurring throughout the Black River Basin. Both populations exhibited allometric growth and the relationships between length and weight in the P. pardalis populations were significant and linear.
摘要2007年6月至2008年5月,对从牙买加圣伊丽莎白布莱克河上下莫拉斯采集的吸嘴鲶鱼标本进行了形态计量学调查。描述了39个形态计量和15个分生组织测量。通过应用二分键、照片鉴定以及与类似物种的其他形态计量学工作的比较,进行了分类学评估,将懒猴鉴定为豹翅目(双鱼,懒猴科)。进一步的分析表明,与下莫拉斯的个体相比,上莫拉斯的豹蛛种群具有相对更长的头部、更长的鼻部、更长更深的尾垂和更深的背鳍。主成分分析(PCA)显示,整个黑河流域没有出现不同的豹尾蠊类群。这两个种群都表现出异速生长,并且豹蛛种群的长度和重量之间的关系是显著的线性关系。
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引用次数: 0
Identity of Fish Fry from the “Tetí” Fishery in Eastern Cuba 从古巴东部的“Tetí”渔业看鱼苗的特性
IF 0.4 4区 生物学 Q4 BIODIVERSITY CONSERVATION Pub Date : 2021-09-16 DOI: 10.18475/cjos.v51i2.a6
S. Rodríguez-Machado, T. Rodríguez-Cabrera, P. Chakrabarty
Abstract Fisheries of juvenile and larval fishes (i.e., fish-fry fisheries) often exploit the migratory behavior of diadromous species on their return to rivers. Although these fisheries are common worldwide, fish-fry fisheries are subject to insufficient management and the identity of the target species is frequently unknown. The artisanal fish-fry fishery in Cuba is known as “Tetí,” and is restricted to the eastern region of the country. Fishing “Tetí” has been practiced for hundreds of years, but an increase in tourism has elevated demand in recent years and may pose a threat to the conservation of this natural resource. Also, it remains unclear if “Tetí” refers to one or to multiple species. The present study aims to identify the fish fry that make up the “Tetí” fishery in Eastern Cuba with genetic data. We first used a standard nucleotide BLAST to identify the sequences. Then, we recovered the phylogenetic position of these samples based on a maximum likelihood phylogenetic analysis that also used available sequences from GenBank. Here, we provide evidence that Busck's Stone-Biting Goby, Sicydium buscki (Gobiidae), is a component of the “Tetí” fishery in Cuba. However, whether this fishery includes one or more species remains a mystery until additional samples can be analyzed. This species identification represents the first efforts towards effective management that can be taken to regulate this fishery. Collecting additional scientific and fishing data from the “Tetí” fishery, and including them in local management plans, will be an important strategy for avoiding overfishing this resource.
摘要幼鱼和幼鱼的捕捞(即鱼苗捕捞)通常利用溯河产卵物种返回河流时的迁徙行为。尽管这些渔业在世界各地都很常见,但鱼苗渔业管理不足,目标物种的身份往往未知。古巴的手工鱼苗渔业被称为“Tetí”,仅限于该国东部地区。捕鱼“Tetí”已经有数百年的历史了,但近年来旅游业的增长提高了需求,并可能对这一自然资源的保护构成威胁。此外,目前尚不清楚“Tetí”是指一个物种还是指多个物种。本研究旨在利用基因数据确定古巴东部“Tetí”渔业的鱼苗。我们首先使用标准核苷酸BLAST来鉴定序列。然后,我们基于最大似然系统发育分析恢复了这些样本的系统发育位置,该分析也使用了GenBank的可用序列。在这里,我们提供的证据表明,Busck‘s Stone Biting Goby,Sicydium buscki(Gobiidae),是古巴“Tetí”渔业的一个组成部分。然而,在分析更多的样本之前,这种渔业是否包括一个或多个物种仍然是个谜。这一物种识别代表了为有效管理该渔业所做的第一次努力。从“Tetí”渔业收集更多的科学和渔业数据,并将其纳入当地管理计划,将是避免过度捕捞这一资源的重要战略。
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引用次数: 0
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Caribbean Journal of Science
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