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Spectroscopic characterization of chiral substances: proline and glutamine 手性物质的光谱表征:脯氨酸和谷氨酰胺。
IF 2.6 3区 化学 Q2 CHEMISTRY, ANALYTICAL Pub Date : 2026-02-16 DOI: 10.1039/D5AY02127H
Huiyu Yang, Xinrui Zhang, Qifubo Geng, Yang Gao, Zhuang Peng, Bo Su, Hailin Cui, Shengbo Zhang, Cunlin Zhang and Kai Li

Chiral substances such as proline and glutamine have garnered increasing attention due to their distinct biological roles in different enantiomeric forms. In this study, proline and glutamine were investigated using powder X-ray diffraction (PXRD), Raman spectroscopy, and terahertz time-domain spectroscopy (THz-TDS). PXRD confirmed the crystalline structures of the samples, while Raman spectroscopy showed limited ability to distinguish between enantiomers. In contrast, THz-TDS enabled clear differentiation based on peak positions and intensities. Quantitative analysis reveals a strong linear correlation between concentration and THz response. For L-proline, the average prediction accuracy attains 96% based on peak amplitude and 98% based on peak area. Similarly, for L-glutamine, the corresponding accuracies are 96% and 92%, respectively. Notably, the most effective indicators are the peak area of L-proline at 2.08 THz (R2 = 0.99980) and the peak amplitude of L-glutamine at 1.71 THz (R2 = 0.98521). Furthermore, THz spectral characteristics consistent with those of pure samples were observed in two commercial dietary supplements. These findings demonstrate that THz spectroscopy offers a rapid and effective method for identifying chiral active ingredients in dietary supplements.

脯氨酸和谷氨酰胺等手性物质因其在不同对映体中具有不同的生物学作用而受到越来越多的关注。本文采用粉末x射线衍射(PXRD)、拉曼光谱(Raman spectroscopy)和太赫兹时域光谱(THz-TDS)对脯氨酸和谷氨酰胺进行了研究。PXRD证实了样品的晶体结构,而拉曼光谱显示区分对映体的能力有限。相比之下,THz-TDS可以根据峰的位置和强度进行明确的区分。定量分析表明,浓度与太赫兹响应之间存在很强的线性关系。对于l -脯氨酸,基于峰幅的平均预测精度达到96%,基于峰面积的平均预测精度达到98%。同样,对于l -谷氨酰胺,相应的准确度分别为96%和92%。其中,l -脯氨酸在2.08 THz处的峰面积(R2 = 0.99980)和l -谷氨酰胺在1.71 THz处的峰幅(R2 = 0.98521)是最有效的指标。此外,在两种商业膳食补充剂中观察到与纯样品一致的太赫兹光谱特征。研究结果表明,太赫兹光谱为膳食补充剂中手性活性成分的鉴定提供了一种快速有效的方法。
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引用次数: 0
A CRISPR/Cas9-regulated dual-ring topological allosteric probe for detection of the EGFR L858R resistance mutation in CTCs CRISPR/ cas9调控的双环拓扑变构探针用于检测CTCs中EGFR L858R耐药突变。
IF 2.6 3区 化学 Q2 CHEMISTRY, ANALYTICAL Pub Date : 2026-02-13 DOI: 10.1039/D5AY02124C
Chenxing Wang, Dandan Li, Rongjun Yu, Jianjiang Xue, Wei Xie, Qiongyuan Zhang, Xiao Gui, Lilin Wang, Sihan Guo, Yu Xie, Yu Jiang, Gang Liu and Jiangling Wu

A single-nucleotide polymorphism (SNP) is a point mutation occurring at a defined genomic locus, and its precise and rapid detection in circulating tumor cells (CTCs) is essential for early diagnosis and therapeutic monitoring of non-small cell lung cancer (NSCLC). In this study, a CRISPR/Cas9-regulated dual-ring topological allosteric probe was developed for ultrasensitive and specific detection of the EGFR L858R mutation. The recognition ring selectively hybridizes with the target sequence and is cleaved by the Cas9–sgRNA complex, triggering the release of the reporter ring. The released reporter ring then serves as a template for rolling circle amplification (RCA), generating products that hybridize with dual-labeled fluorescent probes to yield measurable signals. This assay clearly distinguished L858R from the wild-type sequence and detected mutation frequencies as low as 1.0% with high specificity against other common EGFR variants. Its robustness was further validated using clinical blood samples, enabling sensitive detection of low-abundance L858R mutations. These results demonstrate that the integration of programmable target recognition, efficient signal amplification, and fluorescence readout provides a promising platform for SNP analysis in liquid biopsy, supporting precision diagnosis and treatment monitoring in NSCLC.

单核苷酸多态性(SNP)是发生在特定基因组位点的点突变,其在循环肿瘤细胞(CTCs)中的精确和快速检测对于非小细胞肺癌(NSCLC)的早期诊断和治疗监测至关重要。本研究开发了一种CRISPR/ cas9调控的双环拓扑变构探针,用于超灵敏和特异性检测EGFR L858R突变。识别环选择性地与靶序列杂交,并被Cas9-sgRNA复合物切割,触发报告环的释放。释放的报告环然后作为滚动环扩增(RCA)的模板,产生与双标记荧光探针杂交的产物,以产生可测量的信号。该试验清楚地将L858R与野生型序列区分开来,检测到的突变频率低至1.0%,对其他常见EGFR变体具有高特异性。临床血液样本进一步验证了其稳健性,实现了低丰度L858R突变的灵敏检测。这些结果表明,可编程目标识别、高效信号放大和荧光读数的集成为液体活检中的SNP分析提供了一个有希望的平台,支持NSCLC的精确诊断和治疗监测。
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引用次数: 0
Calorific value measurement of large-particle coal using NIRS–XRF fusion spectroscopy and nonlinear residual correction: a PLS–AE–RR model framework 基于NIRS-XRF融合光谱和非线性残差校正的大颗粒煤热值测量:PLS-AE-RR模型框架。
IF 2.6 3区 化学 Q2 CHEMISTRY, ANALYTICAL Pub Date : 2026-02-12 DOI: 10.1039/D5AY01967B
Yifan Qiao, Ruonan Liu, Bin Li, Rui Gao, Jiaxuan Li and Lei Zhang

This study addresses the on-site challenge posed by large-particle (0–6 mm) coal samples, which are difficult to mill and exhibit pronounced matrix effects and strong nonlinearities that degrade the accuracy of online calorific-value prediction. We propose an NIRS–XRF fused-spectra framework—PLS–AE–RR (Partial Least Squares – Autoencoder – Ridge Regression)—for coal-quality prediction. The principal novelty of the framework is a three-tier hybrid architecture combining a linear baseline (PLS), nonlinear feature extraction (AE), and residual correction (RR). By confining complex nonlinear modeling to the residual domain of the linear model, employing an autoencoder to learn deep latent features, and applying ridge regression for precise residual correction, the approach substantially enhances robustness while preserving interpretability and facilitating engineering deployment. Using a custom NIRS–XRF dual-spectroscopy system, the method was validated on 153 mixed-particle coal samples collected from two power plants. Results demonstrate a marked improvement in calorific-value prediction for coarse coal: the PLS–AE–RR model achieved test-set R2 values of 0.974 and 0.938 for lignite and bituminous coal, respectively, with MAE values of 0.233 MJ kg−1 and 0.216 MJ kg−1. PLS–AE–RR also consistently outperformed alternative nonlinear correction schemes (PLS-AE-RF and PLS-AE-SVR), yielding the lowest MAE and RMSE and thereby underscoring the generalization advantage of ridge regression for residual fitting. The proposed method offers coal-fired power plants a high-accuracy, high-reliability online tool for raw-coal calorific-value measurement that obviates labor-intensive sample pretreatment and supports refined fuel management and coal-blending optimization.

本研究解决了大颗粒(0-6 mm)煤样带来的现场挑战,这些煤样难以磨矿,并表现出明显的基质效应和强烈的非线性,从而降低了在线热值预测的准确性。我们提出了一个NIRS-XRF融合光谱框架- pls - ae - rr(偏最小二乘-自编码器-岭回归)-用于煤质量预测。该框架的主要新颖之处是一个三层混合架构,结合了线性基线(PLS)、非线性特征提取(AE)和残差校正(RR)。通过将复杂的非线性建模限制在线性模型的残差域,采用自编码器学习深度潜在特征,并应用脊回归进行精确残差校正,该方法大大增强了鲁棒性,同时保持了可解释性并便于工程部署。使用定制的NIRS-XRF双光谱系统,对来自两个发电厂的153个混合颗粒煤样品进行了验证。结果表明,PLS-AE-RR模型对粗煤的热值预测有明显改善:褐煤和烟煤的测试集R2分别为0.974和0.938,MAE分别为0.233 MJ kg-1和0.216 MJ kg-1。PLS-AE-RR也始终优于其他非线性校正方案(PLS-AE-RF和PLS-AE-SVR),产生最低的MAE和RMSE,从而强调了岭回归在残差拟合中的泛化优势。该方法为燃煤电厂提供了一种高精度、高可靠性的原煤热值在线测量工具,避免了劳动密集型的样品预处理,并支持精炼燃料管理和配煤优化。
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引用次数: 0
Harnessing CRISPR/Cas systems for food safety detection: biosensor design and emerging applications for food safety detection 利用CRISPR/Cas系统进行食品安全检测:生物传感器设计和食品安全检测的新兴应用。
IF 2.6 3区 化学 Q2 CHEMISTRY, ANALYTICAL Pub Date : 2026-02-12 DOI: 10.1039/D5AY01791B
Yunwei Niu, Siyuan Wu and Jing Su

Food safety has become a critical global concern, with foodborne diseases affecting approximately 600 million people annually and causing 420 000 deaths each year, posing significant risks to human health and well-being. Rapid, efficient, and reliable detection methods are essential to mitigate these risks. Traditional detection methods, such as PCR and culture-based assays, while widely used, often face challenges related to speed, accuracy, and portability. Over the past 5 years (2020–2025), the (CRISPR)/Cas system has emerged as a powerful tool for food safety detection due to its high sensitivity, specificity, and versatility. This review highlights recent advances in CRISPR/Cas-based biosensors and their applications in food safety. First, we discuss the key challenges in food safety detection and the design principles of CRISPR/Cas biosensors. Next, we comprehensively summarize their applications in detecting foodborne pathogens (viruses and bacteria), food fraud, genetically modified organisms (GMOs), toxins, heavy metals, antibiotic residues, and pesticides. Finally, we address the current limitations and future prospects of CRISPR/Cas biosensors, providing insights into their potential for next-generation food safety solutions.

食品安全已成为全球关注的一个重大问题,食源性疾病每年影响约6亿人,每年造成42万人死亡,对人类健康和福祉构成重大风险。快速、高效和可靠的检测方法对于减轻这些风险至关重要。传统的检测方法,如PCR和基于培养的测定,虽然广泛使用,但经常面临与速度、准确性和可移植性相关的挑战。在过去的5年(2020-2025)中,CRISPR /Cas系统因其高灵敏度、特异性和多功能性而成为食品安全检测的有力工具。本文综述了基于CRISPR/ cas的生物传感器及其在食品安全中的应用的最新进展。首先,我们讨论了食品安全检测中的关键挑战和CRISPR/Cas生物传感器的设计原则。其次,我们全面总结了它们在检测食源性病原体(病毒和细菌)、食品欺诈、转基因生物、毒素、重金属、抗生素残留和农药等方面的应用。最后,我们讨论了CRISPR/Cas生物传感器的当前局限性和未来前景,并提供了它们在下一代食品安全解决方案中的潜力。
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引用次数: 0
Investigating the reproducibility and repeatability of commercial SERS substrates using a new methodological approach 使用新的方法研究商业SERS底物的再现性和可重复性。
IF 2.6 3区 化学 Q2 CHEMISTRY, ANALYTICAL Pub Date : 2026-02-12 DOI: 10.1039/D6AY00022C
Qiqian Liu, Aicha Azziz, Vlad Cucuiet, Marjan Majdinasab, Celia Arib, Xiang Yang, Weiling Fu, Monica Focsan, Frédéric Amiard, Mathieu Edely and Marc Lamy de la Chapelle

Surface-enhanced Raman spectroscopy (SERS) is a powerful analytical tool for the observation, the detection and the identification of chemical or biological species at low concentrations due to its high sensitivity, specific fingerprinting capability and real-time detection. However, a key challenge lies in establishing a suitable and reliable measurement protocol to ensure both reproducibility and repeatability when SERS is used as a sensing nanoplatform. In this paper, we propose a specific methodology to investigate the performance of SERS substrates, with a particular focus on their reproducibility and repeatability. Furthermore, we validate our approach on one commercial SERS Hamamatsu substrate from Hamamatsu Photonics by using diluted solution of 4-mercaptobenzoic acid (MBA) at an excitation wavelength of 633 nm. This proposed protocol consists in recording 25 SERS maps equally distributed on the whole surface substrate. For each map, 16 spectra have been acquired and averaged to provide a representative SERS signal. In total, 400 spectra have been collected and analyzed by using the integrated intensities of characteristic MBA bands to determine both reproducibility and repeatability. This approach enables us to quantify signal variations, at the micrometer scale, as well as across the entire substrate. We demonstrated that while the SERS response is highly reproducible locally, it becomes less consistent when evaluated across the full surface. However, the SERS signal is not repeatable at the local scale but it can be repeatable at the whole substrate scale as the average SERS intensity is identical for both SERS measurements. Furthermore, we demonstrated that this method can also be applied to DNA strands thereby demonstrating its effectiveness in evaluating biosensors. Finally, the proposed methodology and protocol can then be used as a standard to precisely evaluate the sensing performances of other substrates.

表面增强拉曼光谱(SERS)由于其高灵敏度、特异指纹识别能力和实时检测能力,是低浓度下观察、检测和鉴定化学或生物物种的强大分析工具。然而,一个关键的挑战在于建立一个合适和可靠的测量方案,以确保SERS用作传感纳米平台时的再现性和可重复性。在本文中,我们提出了一种特定的方法来研究SERS衬底的性能,特别关注它们的再现性和可重复性。此外,我们利用4-巯基苯甲酸(MBA)稀释溶液在633 nm激发波长下,在Hamamatsu Photonics的商用SERS Hamamatsu衬底上验证了我们的方法。该方案包括记录均匀分布在整个表面基板上的25个SERS图。对于每张地图,已获取16个光谱并进行平均,以提供具有代表性的SERS信号。总共收集了400个光谱,并利用特征MBA波段的综合强度进行分析,以确定再现性和可重复性。这种方法使我们能够在微米尺度上以及在整个基板上量化信号变化。我们证明,虽然SERS反应在局部具有高度可重复性,但在整个表面进行评估时,它变得不那么一致。然而,SERS信号在局部尺度上是不可重复的,但在整个基底尺度上是可重复的,因为两种SERS测量的平均SERS强度是相同的。此外,我们证明了这种方法也可以应用于DNA链,从而证明了它在评估生物传感器方面的有效性。最后,所提出的方法和协议可以作为一个标准,以准确地评估其他基片的传感性能。
{"title":"Investigating the reproducibility and repeatability of commercial SERS substrates using a new methodological approach","authors":"Qiqian Liu, Aicha Azziz, Vlad Cucuiet, Marjan Majdinasab, Celia Arib, Xiang Yang, Weiling Fu, Monica Focsan, Frédéric Amiard, Mathieu Edely and Marc Lamy de la Chapelle","doi":"10.1039/D6AY00022C","DOIUrl":"10.1039/D6AY00022C","url":null,"abstract":"<p >Surface-enhanced Raman spectroscopy (SERS) is a powerful analytical tool for the observation, the detection and the identification of chemical or biological species at low concentrations due to its high sensitivity, specific fingerprinting capability and real-time detection. However, a key challenge lies in establishing a suitable and reliable measurement protocol to ensure both reproducibility and repeatability when SERS is used as a sensing nanoplatform. In this paper, we propose a specific methodology to investigate the performance of SERS substrates, with a particular focus on their reproducibility and repeatability. Furthermore, we validate our approach on one commercial SERS Hamamatsu substrate from Hamamatsu Photonics by using diluted solution of 4-mercaptobenzoic acid (MBA) at an excitation wavelength of 633 nm. This proposed protocol consists in recording 25 SERS maps equally distributed on the whole surface substrate. For each map, 16 spectra have been acquired and averaged to provide a representative SERS signal. In total, 400 spectra have been collected and analyzed by using the integrated intensities of characteristic MBA bands to determine both reproducibility and repeatability. This approach enables us to quantify signal variations, at the micrometer scale, as well as across the entire substrate. We demonstrated that while the SERS response is highly reproducible locally, it becomes less consistent when evaluated across the full surface. However, the SERS signal is not repeatable at the local scale but it can be repeatable at the whole substrate scale as the average SERS intensity is identical for both SERS measurements. Furthermore, we demonstrated that this method can also be applied to DNA strands thereby demonstrating its effectiveness in evaluating biosensors. Finally, the proposed methodology and protocol can then be used as a standard to precisely evaluate the sensing performances of other substrates.</p>","PeriodicalId":64,"journal":{"name":"Analytical Methods","volume":" 9","pages":" 1917-1927"},"PeriodicalIF":2.6,"publicationDate":"2026-02-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146206265","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
A novel magnetic and fluorescent nanocomposite probe for detection of matrix metalloproteinase-2 in cells. 一种新型磁性荧光纳米复合探针用于检测细胞中基质金属蛋白酶-2。
IF 2.6 3区 化学 Q2 CHEMISTRY, ANALYTICAL Pub Date : 2026-02-11 DOI: 10.1039/d5ay01892g
Yidan Liu, Chunyang Kang, Xianwei Zuo, Lei Zhao, Yan Wang, Chunyan Liu, Bo Wang

Detection of matrix metalloproteinase-2 (MMP-2) is of great significance for clinical diagnosis and therapy of cancer in the early stage. In this study, a novel magnetic-fluorescent nanocomposite probe for simple, fast and sensitive detection of MMP-2 was innovatively developed by self-assembly of a specifically designed MMP-2 substrate peptide and cobalt-nitrilotriacetate (Co2+-NTA) modified magnetic beads via the chelation mechanism. The specifically designed peptide consisted of green fluorescein (FITC) that acted as the fluorescence signal donor, and the MMP-2 cleavage sequence fused with the hexa-histidine (6× His) tag. In the presence of MMP-2, the His-tagged fluorescent peptides conjugated to the Co2+-NTA modified magnetic beads would be cleaved by MMP-2 due to specific substrate recognition, releasing the FITC-labeled peptide segment into the solution. After the nanocomposite probe was removed from the reaction solution by magnetic separation, high fluorescence signal intensity of the supernatant would be obtained. The proposed nanoprobe demonstrated a wide linear range and a high sensitivity for MMP-2 with a detection limit of 0.3 ng mL-1. It also exhibited satisfactory performance in cell samples. Additionally, the novel nanoprobe could be effectively separated and recycled using a magnet, which allows it to exhibit reusable characteristics. This method not only provides a novel strategy for MMP-2 assay but also offers potential application in biomedical and clinical studies.

基质金属蛋白酶-2 (matrix metalloproteinase-2, MMP-2)的检测对早期肿瘤的临床诊断和治疗具有重要意义。本研究创新性地开发了一种简单、快速、灵敏检测MMP-2的新型磁荧光纳米复合探针,该探针通过螯合机制将专门设计的MMP-2底物肽与钴-硝基三乙酸(Co2+-NTA)修饰的磁珠自组装。该肽由绿色荧光素(FITC)作为荧光信号供体,MMP-2裂解序列与六组氨酸(6× His)标签融合而成。在MMP-2存在的情况下,与Co2+-NTA修饰的磁珠结合的his标记的荧光肽会由于特异性底物识别而被MMP-2切割,将fitc标记的肽段释放到溶液中。通过磁分离将纳米复合探针从反应溶液中分离出来后,上清液的荧光信号强度较高。该探针对MMP-2具有较宽的线性范围和较高的灵敏度,检测限为0.3 ng mL-1。在细胞样品中也表现出令人满意的性能。此外,这种新型纳米探针可以使用磁铁有效地分离和回收,这使得它具有可重复使用的特性。该方法不仅为MMP-2的检测提供了新的策略,而且在生物医学和临床研究中具有潜在的应用前景。
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引用次数: 0
Validation of an RP-HPLC method for simultaneously quantifying three UV filters encapsulated into nanostructured lipid carriers 同时定量纳米结构脂质载体中三种紫外线过滤器的RP-HPLC方法的验证。
IF 2.6 3区 化学 Q2 CHEMISTRY, ANALYTICAL Pub Date : 2026-02-11 DOI: 10.1039/D5AY01558H
Andressa C. Schneid, Hatylas Azevedo and Margarete M. de Araújo

The development of sunscreens incorporating nanostructured lipid carriers (NLCs) is gaining traction in the cosmeceutical industry to enhance photoprotection. These innovative systems require robust and precise analytical methods to accurately quantify the chemical filters encapsulated within the lipid matrix. This study presents a fully validated RP-HPLC method specifically designed for the simultaneous quantification of three UV filters: diethylamino hydroxybenzoyl hexyl benzoate (DHHB), bis-ethylhexyloxyphenol methoxyphenyl triazine (BEMT), and ethylhexyl triazone (EHT), which were encapsulated in nanostructured lipid carriers (NLCs). The methods reported in the literature lack validation for nanostructure systems as they usually focus on exploring methods for free filters. Here, our approach was to optimize and validate an analytical method for NLCs, which demonstrated robustness, high sensitivity (LOD as low as 0.6 µg mL−1), and compliance with the ICH guidelines. The method enabled the accurate and precise determination of filter extracted content, based on the extraction method, and encapsulation efficiency, supporting formulation optimization and industrial scalability by identifying a pool of interchangeable prototypes. Encapsulation efficiency of the UV-filters as the main response evaluated, which was interpreted through the critical quality attributes (CQAs) of values above 70%. Hence, the present study addresses a critical gap in the analytical methodologies for emerging nanoformulation technologies.

含有纳米结构脂质载体(nlc)的防晒霜的开发在药妆工业中越来越受到关注,以增强光防护。这些创新的系统需要强大的和精确的分析方法,以准确地量化化学过滤器封装在脂质基质。本研究提出了一种完全有效的RP-HPLC方法,专门设计用于同时定量三种紫外滤光剂:二乙基氨基羟基苯甲酰己基苯甲酸酯(DHHB)、二乙基己基氧基酚甲氧基苯基三嗪(BEMT)和乙基己基三嗪(EHT),这些滤光剂被封装在纳米结构脂质载体(nlc)中。文献中报道的方法缺乏对纳米结构系统的验证,因为它们通常侧重于探索自由过滤器的方法。在这里,我们的方法是优化和验证NLCs的分析方法,该方法具有鲁棒性,高灵敏度(LOD低至0.6µg mL-1),并且符合ICH指南。该方法能够根据提取方法和封装效率准确、精确地测定滤液提取含量,通过确定可互换的原型池,支持配方优化和工业可扩展性。以紫外滤光片的包封效率为主要评价指标,通过临界质量属性(cqa)值大于70%来解释。因此,本研究解决了新兴纳米配方技术分析方法中的一个关键空白。
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引用次数: 0
Development and application of a tetra-ARMS PCR assay for detecting indel polymorphisms in the bovine PRNP gene 牛PRNP基因indel多态性检测方法的建立与应用。
IF 2.6 3区 化学 Q2 CHEMISTRY, ANALYTICAL Pub Date : 2026-02-11 DOI: 10.1039/D5AY02047F
Ye Xu, Siyu Yang, Siling Ding, Ting Xu, Jian Ge, Weiming Xiao, Like Zhu and Feng Guan

Insertion/deletion (indel) polymorphisms in the promoter region (23 bp) and intron 1 (12 bp) of the bovine PRNP gene influence gene expression and susceptibility to bovine spongiform encephalopathy (BSE). Conventional detection strategies dependent on DNA sequencing are cumbersome and costly. A tetra-primer amplification refractory mutation system PCR (tetra-ARMS PCR) assay was developed which can enable efficient and cost-effective genotyping of each indel locus. Optimized tetra-ARMS PCR primers and multiplex conditions allowed electrophoretic genotyping of the 23 bp indel via the size and presence of 422 bp, 259 bp, and 193 bp amplicons, whereas the 12 bp indel was genotyped based on the size and presence of 598 bp, 472 bp, and 153 bp fragments. Furthermore, the compatibility of these primer sets was preliminarily investigated, demonstrating the potential for co-amplification in a single-tube multiplex format. Validation against Sanger sequencing using 62 randomly selected cattle-derived retail samples demonstrated complete concordance. This straightforward, specific and cost-effective method requires only conventional PCR instrumentation, thereby establishing a robust and accessible platform for PRNP-assisted breeding and cattle product genotyping.

牛PRNP基因启动子区(23 bp)和内含子1 (12 bp)的插入/缺失(indel)多态性影响牛海绵状脑病(BSE)的基因表达和易感性。依赖于DNA测序的传统检测策略既繁琐又昂贵。建立了一种四引物扩增难突变系统PCR (tetrai - arms PCR)方法,该方法可以高效、经济地对每个indel位点进行基因分型。优化后的422 bp、259 bp和193 bp扩增片段的大小和存在度对23 bp序列进行了电泳分型,而对12 bp序列进行了598 bp、472 bp和153 bp扩增片段的大小和存在度进行了基因分型。此外,对这些引物组的相容性进行了初步研究,证明了在单管多重格式下共同扩增的潜力。使用62个随机选择的牛源零售样本对Sanger测序进行验证,证明完全一致。这种简单、特异且经济有效的方法只需要传统的PCR仪器,从而为prnp辅助育种和牛产品基因分型建立了一个强大且易于使用的平台。
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引用次数: 0
A hydrophilic interaction UPLC-MS/MS quantitative method for the quantification of saracatinib in the human liver microsome matrix and its application in in vitro metabolic stability assessment 人肝微粒体基质中萨拉卡替尼的亲水相互作用UPLC-MS/MS定量方法及其在体外代谢稳定性评价中的应用
IF 2.6 3区 化学 Q2 CHEMISTRY, ANALYTICAL Pub Date : 2026-02-11 DOI: 10.1039/D5AY02096D
Mohamed W. Attwa and Adnan A. Kadi

Saracatinib (AZD-0530; SRB) is a pharmaceutical agent produced by AstraZeneca and is currently undergoing clinical studies. It is classified as a dual-kinase inhibitor, exhibiting selective activity both as an Src inhibitor and a Bcr–Abl tyrosine kinase inhibitor. No metabolic stability study for SRB has been reported; hence, so the goal of the present study was to establish an ultra-fast, green, sensitive, and validated UPLC-MS/MS method for the quantification of SRB levels in human liver microsomes (HLMs) using different in silico software to support the practical outcomes. The validated approach was used to estimate the SRB metabolic stability in HLMs. In silico software tools were employed to predict the potential sites of metabolic lability and toxicity within the SRB structure. SRB and baricitinib, used as an internal standard (IS), were isolated from HLMs using protein precipitation with acetonitrile (ACN) as the extracting agent. Chromatographic separation was conducted utilizing a Luna 3 µm HILIC column (200 Å: 50 × 2 mm, Ea), with the mobile phase comprising 0.1% formic acid in ACN (85%) and 10 mM ammonium formate in water (15% at pH 3.2), and the total run time was 1.0 min. SRB and IS were analyzed utilizing the MRM mass analyzer mode. The approach was validated according to the latest FDA guidelines for bioanalytical method validation. The SRB calibration curve demonstrated significant sensitivity, with a range of statistical linearity from 1 to 4000 ng mL−1. The intraday and interday accuracies of the four quality controls varied from −4.17% to 12.25% and −3.92% to 13.50%, respectively. The metabolic stability parameters, including the in vitro half-life (t1/2) and intrinsic clearance (Clint) of SRB, were assessed at 17.24 min and 47.02 mL min−1 kg−1, respectively. In silico research indicated that slight structural modifications to the N-methyl piperazine ring in the drug design may enhance metabolic stability and safety compared with those of SRB.

Saracatinib (AZD-0530; SRB)是阿斯利康公司生产的一种药物制剂,目前正在进行临床研究。它被归类为双激酶抑制剂,表现出作为Src抑制剂和Bcr-Abl酪氨酸激酶抑制剂的选择性活性。没有关于SRB代谢稳定性的研究报道;因此,本研究的目的是建立一种超快速、绿色、敏感和有效的UPLC-MS/MS方法,用于定量人肝微粒体(HLMs)中SRB的水平,使用不同的计算机软件来支持实际结果。该方法被用于估计HLMs中SRB代谢稳定性。利用计算机软件工具预测SRB结构内代谢不稳定性和毒性的潜在位点。以乙腈(ACN)为萃取剂,采用蛋白沉淀法从HLMs中分离出SRB和baricitinib作为内标(IS)。色谱分离采用Luna 3µm HILIC色谱柱(200 Å: 50 × 2mm, Ea),流动相为0.1%甲酸水溶液(85%)和10 mm甲酸铵水溶液(15%,pH 3.2),总运行时间为1.0 min。利用MRM质谱仪模式分析SRB和IS。根据最新的FDA生物分析方法验证指南对该方法进行了验证。SRB校准曲线具有显著的灵敏度,其统计线性范围为1 ~ 4000 ng mL-1。4种质控方法的日内、日间准确度分别为-4.17% ~ 12.25%和-3.92% ~ 13.50%。分别在17.24 min和47.02 mL min-1 kg-1时评估SRB的体外半衰期(t1/2)和内在清除率(Clint)等代谢稳定性参数。硅研究表明,与SRB相比,在药物设计中对n -甲基哌嗪环进行轻微的结构修饰可以提高代谢稳定性和安全性。
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引用次数: 0
Optimization of aptamer-triggered hybridization chain reaction for rapid visual ATP detection using gold nanoparticles 纳米金核酸适配体触发杂交链反应的优化研究。
IF 2.6 3区 化学 Q2 CHEMISTRY, ANALYTICAL Pub Date : 2026-02-11 DOI: 10.1039/D5AY01738F
Shengli Zhou, Hiroko Fukaya, Shunsuke Watanuki, Wei Liu, Maasa Yokomori, Muneyuki Matsuo, Kazuya Okada, Yukina Yoshioka and Keitaro Yoshimoto

The development of fast, simple, and visual methods for detecting adenosine triphosphate (ATP) is crucial for point-of-care diagnostics and environmental monitoring. Colorimetric assays based on the integration of DNA aptamer-triggered hybridization chain reaction (HCR) with gold nanoparticles (AuNPs) offer high potential, but existing methods often suffer from prolonged detection times (e.g., >130 min). To address this limitation, this study systematically investigated and optimized the core parameters of the aptamer-triggered HCR system and its subsequent mixing conditions with AuNPs to achieve a rapid visual detection platform. The HCR kinetics were accelerated by the high concentrations of single-stranded DNA (ssDNA) components, particularly the H0 initiator, as well as by the critical presence of divalent magnesium ions (Mg2+), which also support the functionality of the aptamer. This optimization allowed for a degree of HCR progression comparable to the traditional 24-hour incubation to be achieved within just 60 minutes. Subsequently, recognizing the inherent trade-off between the high ssDNA concentration required for fast HCR and the AuNP dispersion stability, we optimized the mixing ratio between the HCR product and the AuNP solution. Under these optimized conditions, the assay demonstrated the capability for rapid visual detection of ATP at the 100 µM level within a total assay time of 15 minutes, representing a significant acceleration compared to previously reported methods. Further improvements in sensitivity are anticipated through future fine-tuning of AuNP parameters and the use of post-reaction salt aggregation enhancers.

开发快速、简单、直观的检测三磷酸腺苷(ATP)的方法对于即时诊断和环境监测至关重要。基于DNA核酸配体触发的杂交链反应(HCR)与金纳米颗粒(AuNPs)整合的比色分析具有很高的潜力,但现有方法往往存在检测时间较长的问题(例如,100 - 130分钟)。为了解决这一局限性,本研究系统地研究和优化了适体触发HCR系统的核心参数及其与aunp的后续混合条件,以实现快速视觉检测平台。高浓度的单链DNA (ssDNA)组分,特别是H0引发剂,以及二价镁离子(Mg2+)的存在加速了HCR动力学,这也支持了适体的功能。这种优化允许在60分钟内实现与传统24小时孵育相当程度的HCR进展。随后,认识到快速HCR所需的高ssDNA浓度与AuNP分散稳定性之间的内在权衡,我们优化了HCR产品与AuNP溶液之间的混合比例。在这些优化的条件下,该方法能够在15分钟的总检测时间内快速检测100µM水平的ATP,与之前报道的方法相比,这是一个显着的加速。通过未来对AuNP参数的微调和反应后盐聚集增强剂的使用,预计灵敏度将进一步提高。
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Analytical Methods
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