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Molecular architecture and therapeutic potential of lectin mimics. 凝集素模拟物的分子结构和治疗潜力。
2区 化学 Q2 Chemistry Pub Date : 2012-01-01 DOI: 10.1016/B978-0-12-396523-3.00002-6
Yu Nakagawa, Ito Yukishige

Lectins are proteins of non-immune origin that bind specific carbohydrates without chemical modification. Coupled with the emerging biological and pathological significance of carbohydrates, lectins have become extensively used as research tools in glycobiology. However, lectin-based drug development has been impeded by high manufacturing costs, low chemical stability, and the potential risk of initiating an unfavorable immune response. As alternatives to lectins, non-protein small molecules having carbohydrate-binding properties (lectin mimics) are currently attracting a great deal of attention because of their ease of preparation and chemical modification. Lectin mimics of synthetic origin are divided roughly into two groups, boronic acid-dependent and boronic acid-independent lectin mimics. This article outlines their representative architectures and carbohydrate-binding properties, and discusses their therapeutic potential by reviewing recent attempts to develop antiviral and antimicrobial agents using their architectures. We also focus on the naturally occurring lectin mimics, pradimicins and benanomicins. They are the only class of non-protein natural products having a C-type lectin-like ability to recognize d-mannopyranosides in the presence of Ca(2+) ions. Their molecular basis of carbohydrate recognition and therapeutic potential are also discussed.

凝集素是一种非免疫来源的蛋白质,它结合特定的碳水化合物而不经过化学修饰。随着碳水化合物的生物学和病理学意义的不断出现,凝集素已被广泛用作糖生物学的研究工具。然而,基于凝集素的药物开发一直受到制造成本高、化学稳定性低以及引发不利免疫反应的潜在风险的阻碍。作为凝集素的替代品,具有碳水化合物结合特性的非蛋白质小分子(凝集素模拟物)因其易于制备和化学修饰而受到广泛关注。合成来源的凝集素模拟物大致分为两类,硼酸依赖性和硼酸非依赖性凝集素模拟物。本文概述了它们的代表性结构和碳水化合物结合特性,并通过回顾最近利用它们的结构开发抗病毒和抗菌药物的尝试,讨论了它们的治疗潜力。我们也关注天然存在的凝集素模拟物,pradimicins和benanomicins。它们是唯一一类具有c型凝集素样能力的非蛋白天然产物,在Ca(2+)离子存在下识别d-甘露聚糖。并讨论了它们识别碳水化合物的分子基础和治疗潜力。
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引用次数: 4
Strategies in synthesis of heparin/heparan sulfate oligosaccharides: 2000-present. 肝素/硫酸肝素寡糖的合成策略:2000 年至今。
2区 化学 Q2 Chemistry Pub Date : 2012-01-01 DOI: 10.1016/B978-0-12-396527-1.00003-6
Steven B Dulaney, Xuefei Huang
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引用次数: 0
Carbohydrates. Preface. 碳水化合物。前言。
2区 化学 Q2 Chemistry Pub Date : 2012-01-01 DOI: 10.1016/B978-0-12-396527-1.00006-1
Derek Horton
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引用次数: 0
Carbohydrate science. Preface. 碳水化合物的科学。前言。
2区 化学 Q2 Chemistry Pub Date : 2012-01-01 DOI: 10.1016/B978-0-12-396523-3.09988-7
Derek Horton
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引用次数: 0
Effect of protein dynamics and solvent in ligand recognition by promiscuous aminoglycoside-modifying enzymes. 混杂氨基糖苷修饰酶对配体识别的蛋白质动力学和溶剂的影响。
2区 化学 Q2 Chemistry Pub Date : 2012-01-01 DOI: 10.1016/B978-0-12-396527-1.00005-X
Engin H Serpersu, Adrianne L Norris
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引用次数: 12
Combining computational chemistry and crystallography for a better understanding of the structure of cellulose. 结合计算化学和晶体学,以更好地了解纤维素的结构。
2区 化学 Q2 Chemistry Pub Date : 2012-01-01 DOI: 10.1016/B978-0-12-396527-1.00002-4
Alfred D French
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引用次数: 28
Enzymatic conversions of starch. 淀粉的酶转化。
2区 化学 Q2 Chemistry Pub Date : 2012-01-01 DOI: 10.1016/B978-0-12-396523-3.00001-4
Piotr Tomasik, Derek Horton

This article surveys methods for the enzymatic conversion of starch, involving hydrolases and nonhydrolyzing enzymes, as well as the role of microorganisms producing such enzymes. The sources of the most common enzymes are listed. These starch conversions are also presented in relation to their applications in the food, pharmaceutical, pulp, textile, and other branches of industry. Some sections are devoted to the fermentation of starch to ethanol and other products, and to the production of cyclodextrins, along with the properties of these products. Light is also shed on the enzymes involved in the digestion of starch in human and animal organisms. Enzymatic processes acting on starch are useful in structural studies of the substrates and in understanding the characteristics of digesting enzymes. One section presents the application of enzymes to these problems. The information that is included covers the period from the early 19th century up to 2009.

本文综述了淀粉酶转化的方法,包括水解酶和非水解酶,以及产生这些酶的微生物的作用。列出了最常见的酶的来源。这些淀粉转化还介绍了它们在食品、制药、纸浆、纺织和其他工业部门中的应用。一些章节专门讨论了淀粉发酵成乙醇和其他产品,以及环糊精的生产,以及这些产品的性质。在人类和动物有机体中,参与淀粉消化的酶也得到了阐明。作用于淀粉的酶过程对底物的结构研究和理解消化酶的特性是有用的。其中一节介绍了酶对这些问题的应用。所包含的信息涵盖了从19世纪初到2009年的时期。
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引用次数: 90
Chemical synthesis of glycosylphosphatidylinositol anchors. 糖基磷脂酰肌醇锚的化学合成。
2区 化学 Q2 Chemistry Pub Date : 2012-01-01 DOI: 10.1016/B978-0-12-396527-1.00004-8
Benjamin M Swarts, Zhongwu Guo
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引用次数: 15
Nathan Sharon: 1925-2011. Nathan Sharon: 1925-2011。
2区 化学 Q2 Chemistry Pub Date : 2012-01-01 DOI: 10.1016/b978-0-12-396527-1.00001-2
David Mirelman, Edward A Bayer, Yair Reisner
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引用次数: 0
Toward automated glycan analysis. 走向自动聚糖分析。
2区 化学 Q2 Chemistry Pub Date : 2011-01-01 DOI: 10.1016/B978-0-12-385520-6.00005-4
Shin-Ichiro Nishimura

As drastic structural changes in cell-surface glycans of glycoproteins and glycosphingolipids, as well as serum glycoproteins, are often observed during cell differentiation and cancer progression, it is considered that glycans can be potential candidates for novel diagnostic and therapeutic biomarkers. Although there have been substantial advances in our understanding of the effects of glycosylation on some biological systems, we still do not fully understand the significance and mechanism of glycoform alteration that is widely observed in many human diseases. This is due to the highly complicated structures of the glycans and the extremely tedious and time-consuming processes required for their separation from complex mixtures and their subsequent analysis. As a result, with a few notable exceptions, the therapeutic potential of complex glycans has not been well exploited. This article is focused on the state of the art and current advances in glycomics, and efforts for the development of automated glycan analysis, which should greatly accelerate functional glycobiology and its medical/pharmaceutical applications. The "glycoblotting method" is the only method currently available that allows rapid and large-scale clinical glycomics of human whole-serum glycoproteins, because it requires very little material and, when combined with an automated system "SweetBlot," takes only ∼14h to complete whole glycan profiling by mass spectrometry. The upcoming goal is to combine glycoblotting methods and various MS-based platforms for the development of a fully automated glycan analytical system and accelerating research to discover highly sensitive and clinically important biomarker molecules.

由于在细胞分化和癌症进展过程中经常观察到细胞表面糖蛋白和鞘脂糖聚糖以及血清糖蛋白的剧烈结构变化,因此人们认为糖聚糖可以作为新型诊断和治疗生物标志物的潜在候选者。尽管我们对糖基化对某些生物系统的影响的理解已经取得了实质性的进展,但我们仍然没有完全理解在许多人类疾病中广泛观察到的糖型改变的意义和机制。这是由于聚糖的高度复杂的结构和极其繁琐和耗时的过程,需要从复杂的混合物分离和随后的分析。因此,除了少数值得注意的例外,复合聚糖的治疗潜力尚未得到很好的利用。本文重点介绍了糖组学的最新进展,以及自动糖分析的发展,这将极大地促进功能糖生物学及其医学/制药应用。“糖印迹法”是目前唯一可用的方法,允许快速和大规模的人类全血清糖蛋白的临床糖谱分析,因为它需要很少的材料,当与自动化系统“SweetBlot”结合时,只需要~ 14小时就可以完成全糖谱分析。即将到来的目标是结合糖印迹方法和各种基于质谱的平台,开发全自动糖分析系统,加速研究,发现高度敏感和临床重要的生物标志物分子。
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引用次数: 60
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Advances in carbohydrate chemistry and biochemistry
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