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Colonic Degradation as Reverse Process to Flavone Biosynthesis in Plants: Similarities and Differences. 植物中作为黄酮生物合成逆过程的结肠降解:异同。
Pub Date : 2022-11-30 DOI: 10.2174/1872312815666221130143858
Katrin Sak

Background: For many years, it was thought that the main function of the colon is the reabsorption of water and salt and the elimination of unused food materials. Only very recently, a crucial role of the human intestinal microbiota in the metabolism of different food constituents, including plant foods-derived flavonoids, was discovered. Currently, the knowledge about colonic degradation of ingested flavonoids, involved bacteria and produced catabolites is rapidly increasing. In general, flavonoids unabsorbed in the small intestine reach the colon, where they are exposed to the gut microbiota.

Key findings and conclusion: In this perspective article, colonic degradation of flavonoids is considered a reverse process to their biosynthesis in plants, with a special focus on the subclass of flavones. According to this approach: what is composed in plants, will be decomposed in the human colon. Several inverse similarities are highlighted, including hydrolysis of flavonoid glycosides as the first step in the gut degradation contrasted with the attachment of sugar moiety as the last reaction of flavonoid biosynthesis in plants, colonic reduction contrasted with plant introduction of C2-C3 double bond in the central heterocyclic ring, or microbial ring fission contrasted with plant ring closure of the heterocyclic ring of flavones. Despite these inverse similarities, precursors of flavonoid pathway in plants are different from the spectrum of gut microbial catabolites in humans. In the human colon, a wide variety of phenolic acids are produced from the ingested flavonoids, due to the diverse enzymatic capacity of intestinal microbiota. The bioactivities and potential health impacts of these catabolites are still largely unknown.

背景:多年来,人们一直认为结肠的主要功能是重吸收水分和盐分以及排出未使用的食物材料。直到最近,人们才发现人体肠道微生物群在不同食物成分(包括植物性黄酮类化合物)的新陈代谢中发挥着至关重要的作用。目前,有关摄入的类黄酮在结肠中的降解、参与降解的细菌和产生的代谢产物的知识正在迅速增加。一般来说,在小肠中未被吸收的类黄酮会进入结肠,在结肠中暴露于肠道微生物群:在这篇文章中,黄酮类化合物在结肠中的降解被认为是其在植物中生物合成的一个逆过程,并特别关注黄酮亚类。根据这种方法:在植物中合成的东西将在人体结肠中分解。研究强调了几种反向相似性,包括黄酮苷的水解是肠道降解的第一步,而植物中黄酮生物合成的最后一个反应是糖分子的附着;结肠还原与植物在中心杂环中引入 C2-C3 双键形成对比;或微生物环裂变与植物黄酮杂环的闭环形成对比。尽管存在这些反向相似性,但植物中黄酮类化合物途径的前体与人类肠道微生物代谢产物的范围不同。在人体结肠中,由于肠道微生物群具有多种酶解能力,从摄入的类黄酮中产生了多种酚酸。这些代谢产物的生物活性和对健康的潜在影响在很大程度上仍然未知。
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引用次数: 0
Potential polymorphic CYP1A2 and CYP2D6-mediated pharmacokinetic interactions between risperidone or olanzapine and selected drugs intended to treat COVID-19. 利培酮或奥氮平与用于治疗 COVID-19 的特定药物之间可能存在的多态 CYP1A2 和 CYP2D6 介导的药代动力学相互作用。
Pub Date : 2022-11-25 DOI: 10.2174/1872312815666221125112724
Ariana Rojas-Macetas, Geraldine Medalla-Garro, María Saravia, Ricardo Losno, Milton Valderrama-Wong, Ricardo Pariona, Angel T Alvarado

Risperidone/olanzapine are antipsychotics used in Peru to control symptoms of psychosis. The objective was to review the available evidence on potential pharmacokinetic interactions mediated by CYP1A2 and CYP2D6 polymorphic genes between risperidone or olanzapine and selected drugs for the treatment of COVID-19. A bibliographic search was conducted in SciELO and PubMed/Medline. The selection criteria included all types of articles in English and Spanish languages. In this review, the CYP1A2/CYP2D6/CYP3A4 genes that encode their respective enzymes have been described. The olanzapine/risperidone association increases the risk of prolonging the QT interval; chloroquine/hydroxychloroquine decreases metabolism and increases plasma concentration of risperidone; ritonavir decreases metabolism and increases plasma levels of hydroxychloroquine and lopinavir with the risk of prolonging the QT interval of the cardiac cycle and with a tendency to progression towards Torsades de Pointes. Ritonavir increases metabolism and decreases plasma levels of olanzapine. A low incidence of adverse effect was found between risperidone/azithromycin and olanzapine with azithromycin and hydroxychloroquine. Regarding the association of genes: CYP1A2*1D increases and CYP1A2*1F decreases the plasma concentration of olanzapine. Risperidone plasma levels are increased in CYP2D6 intermediate and poor metabolizers compared with normal metabolizers. Other studies indicate no significant association between poor metabolizers of CYP1A2 and CYP2D6 with increased pharmacokinetic parameters. It is concluded that there are potential risks of prolonging the QT interval due to pharmacokinetic interactions mediated by polymorphic genes CYP1A2 and CYP2D6 between risperidone or olanzapine and the drugs selected for the treatment of COVID-19.

利培酮/奥氮平是秘鲁用于控制精神病症状的抗精神病药物。本研究旨在审查利培酮或奥氮平与用于治疗 COVID-19 的某些药物之间由 CYP1A2 和 CYP2D6 多态基因介导的潜在药代动力学相互作用的现有证据。在 SciELO 和 PubMed/Medline 上进行了文献检索。选择标准包括所有类型的英语和西班牙语文章。在这篇综述中,描述了编码各自酶的 CYP1A2/CYP2D6/CYP3A4 基因。奥氮平/利培酮会增加 QT 间期延长的风险;氯喹/羟氯喹会降低利培酮的代谢并增加其血浆浓度;利托那韦会降低羟氯喹和洛匹那韦的代谢并增加其血浆浓度,从而增加心动周期 QT 间期延长的风险,并有向 Torsades de Pointes 发展的趋势。利托那韦会增加奥氮平的代谢并降低其血浆水平。利培酮/阿奇霉素和奥氮平与阿奇霉素和羟氯喹的不良反应发生率较低。基因关联CYP1A2*1D 会增加奥氮平的血浆浓度,CYP1A2*1F 会降低奥氮平的血浆浓度。与正常代谢者相比,CYP2D6 中度和低度代谢者的利培酮血浆浓度会升高。其他研究表明,CYP1A2 和 CYP2D6 代谢不良者与药代动力学参数升高无明显关联。结论是,利培酮或奥氮平与治疗 COVID-19 所选药物之间存在由多态基因 CYP1A2 和 CYP2D6 介导的药代动力学相互作用,因此存在延长 QT 间期的潜在风险。
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引用次数: 0
Mechanism-based inhibition of CYP3A subfamilies by macrolide antibiotics and piperine. 大环内酯类抗生素和胡椒碱对 CYP3A 亚家族的抑制机制。
Pub Date : 2022-08-04 DOI: 10.2174/2949681015666220804103005
Toshiro Niwa, Risa Ishii

Objective: The mechanism-based inhibition of macrolide antibiotics, such as erythromycin and clarithromycin, and piperine on testosterone 6β-hydroxylation activities by cytochrome P450 (CYP) 3A4, polymorphically expressed CYP3A5, and fetal CYP3A7 were compared.

Methods: 6β-Hydroxy testosterone was determined by high-performance liquid chromatography.

Results: Although preincubation with erythromycin and clarithromycin decreased CYP3A4-meditaed testosterone 6β- hydroxylation in a time-dependent manner, and the estimated maximum inactivation rate constant (k inact ) and the inactivation rate constant reaching half of k inact (K i ) for erythromycin were approximately 1/2 and 1/5, respectively, of those for clarithromycin. Obvious preincubation time-dependent inhibition of erythromycin against CYP3A5 and CYP3A7 was not observed. Piperine exhibited preincubation time- dependent inhibition, and the calculated K i and k inact values for CYP3A4 were approximately 1/7 and 1/2, respectively, of those for CYP3A5.

Conclusion: It is speculated that the preincubation-dependent inhibition by piperine would be more potent in CYP3A5 non-expressors than CYP3A5-expressors.

目的比较红霉素、克拉霉素等大环内酯类抗生素和胡椒碱对细胞色素 P450(CYP)3A4、多态表达的 CYP3A5 和胎儿 CYP3A7 的睾酮 6β 羟基化活性的抑制机制:结果:虽然红霉素和克拉霉素预孵育会以时间依赖的方式降低 CYP3A4 介导的睾酮 6β- 羟基化,但红霉素的最大灭活速率常数(k inact)和达到 k inact一半的灭活速率常数(K i)分别约为克拉霉素的 1/2 和 1/5。没有观察到红霉素对 CYP3A5 和 CYP3A7 有明显的抑制作用。胡椒碱表现出抑制作用的预孵育时间依赖性,计算得出的 CYP3A4 K i 和 k inact 值分别约为 CYP3A5 的 1/7 和 1/2:结论:推测胡椒碱对 CYP3A5 非表达者的预孵育依赖性抑制作用比对 CYP3A5 表达者的抑制作用更强。
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引用次数: 0
Assessment of nano lipid carrier loaded transdermal patch of rizatriptan benzoate. 苯甲酸利扎曲普坦纳米脂质载体透皮贴片的评估。
Pub Date : 2022-06-09 DOI: 10.2174/2949681015666220609095706
Sayani Bhattacharyya, Lavanya Nanjareddy

Background: Migraine is a neurological disorder and is accompanied by different painful episodes. Hence the maintenance of a steady-state concentration of drug can be beneficial for the patients suffering with migraine. The present investigation focuses on the development of nano lipid carriers (NLCs) loaded transdermal patch of rizatriptan benzoate to sustain the effect of the drug for the enhancement of therapeutic effects.

Method: Stearic acid and peanut oil were used to make the NLCs. A central composite design was employed to observe the effect of formulation factors like solid lipid ratio, phase volume ratio, and concentration of surfactants on the formation of nanoparticles. The effects were evaluated for the responses like particle size and entrapment of the drug in the nanocarriers. The optimized formulation was subjected to compatibility, thermal, surface characteristics, and surface morphology studies. The optimized formulation was dispersed in HPMC 15CPS and PVP K30 polymer matrix and the transdermal patch was evaluated for its mechanical properties, drug release study, and skin irritation study.

Results: The experimental design was suitable to produce nanosized stable lipid carriers of the drug with high drug entrapment. The drug and excipients were found to be compatible. The thermal and surface characteristics study proved the high loading of drug in the nanoparticles. The surface morphology study showed the formation of irregular-shaped NLCs. The transdermal patch had good mechanical properties. The ex vivo study of the formulated patch showed a sustained release of the drug over 24h. No skin irritation was reported from the transdermal patch.

Conclusion: Therefore, it can be concluded that the nanoparticles loaded transdermal patch of rizatriptan benzoate can be promising in controlling the divergent phases of migraine.

背景:偏头痛是一种神经系统疾病,会伴随不同的疼痛发作。因此,维持药物的稳态浓度对偏头痛患者有益。本研究的重点是开发纳米脂质载体(NLCs)负载的苯甲酸利扎曲普坦透皮贴片,以维持药物的作用,提高治疗效果:方法:使用硬脂酸和花生油制作 NLCs。方法:用硬脂酸和花生油制成 NLCs,采用中心复合设计法观察固脂比、相体积比和表面活性剂浓度等配方因素对纳米颗粒形成的影响。对纳米载体的粒度和药物包埋等反应进行了评估。对优化配方进行了相容性、热学、表面特征和表面形态学研究。将优化配方分散在 HPMC 15CPS 和 PVP K30 聚合物基质中,并对透皮贴片的机械性能、药物释放研究和皮肤刺激性研究进行了评估:结果:实验设计适用于制备药物的纳米级稳定脂质载体,并具有较高的药物夹持率。药物和辅料的相容性良好。热学和表面特征研究证明纳米颗粒中药物的负载量很高。表面形态研究表明,纳米颗粒形成了不规则形状。透皮贴片具有良好的机械性能。对配制的贴片进行的体内外研究表明,药物可在 24 小时内持续释放。结论:透皮贴片对皮肤没有刺激:因此,可以得出结论,纳米粒子负载的苯甲酸利扎曲普坦透皮贴片在控制偏头痛的不同阶段方面具有良好的前景。
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引用次数: 0
Medicinal Importance, Pharmacological Activities and Analytical Aspects of a Flavonoid Glycoside 'Nicotiflorin' in the Medicine. 一种黄酮类苷“烟florin”的药用价值、药理活性和分析方法。
Pub Date : 2022-01-01 DOI: 10.2174/1872312815666220404110200
Dinesh Kumar Patel

Background: Herbal products are derived from different natural sources, mainly used as a source of food material and medicine in the health sectors since ancient times. Herbal products have gained popularity in modern medicine due to their beneficial health properties and pharmacological activities. Flavonoids are an important class of secondary metabolites found to be present in medicinal plants and their derived products. Flavonoids have been known for their anti-allergic, anti-bacterial, anti-diabetic, anti-inflammatory, anti-viral, anti-proliferative, anti-mutagenic, antithrombotic, anti-carcinogenic, anti-oxidant and hepatoprotective activities in the medicine. Nicotiflorin is a flavonoidal class phytochemical, found in medicinal plants, including Traditional Chinese medicine.

Methods: Scientific data on the medicinal importance and pharmacological activities of nicotiflorin have been collected and analyzed in the present work in order to know the therapeutic importance of nicotiflorin in medicine. Scientific data have been collected from Google, Google Scholar, Science Direct, PubMed and Scopus and analyzed in the present work. Analytical techniques data of separation, isolation and identification of nicotiflorin have also been collected and presented in the current work. Further biological importance of flavonoidal class phytochemicals was also discussed in the present work to understand the biological importance of nicotiflorin in medicine as it belongs to the flavonoid class.

Results: Scientific data analysis revealed the therapeutic importance and pharmacological activities of nicotiflorin. Nicotiflorin has significant biological potential against coronavirus, ischemia, renal impairment, hepatic complication, memory dysfunction and myocardial infarction. The biological potential of nicotiflorin against α-glucosidase and α-amylase enzymes, multiple myeloma cells and insulin secretion has also been discussed in the present work. Analytical data revealed the significance of modern analytical tools in medicine for the isolation, separation and quantification of nicotiflorin.

Conclusion: Scientific data analysis of different research works revealed the biological importance and therapeutic potential of nicotiflorin in medicine.

背景:草药产品来自不同的天然来源,自古以来主要用作食品原料和卫生部门的药物来源。草药产品因其有益健康的特性和药理活性在现代医学中越来越受欢迎。黄酮类化合物是一类重要的次生代谢产物,存在于药用植物及其衍生产品中。黄酮类化合物在医学上具有抗过敏、抗菌、抗糖尿病、抗炎、抗病毒、抗增殖、抗诱变、抗血栓形成、抗癌、抗氧化和保肝等作用。烟碱是一种黄酮类植物化学物质,存在于包括中药在内的药用植物中。方法:收集和分析有关烟氟素药用价值和药理活性的科学资料,以了解烟氟素在医学上的治疗作用。科学数据收集自Google、Google Scholar、Science Direct、PubMed和Scopus,并在本工作中进行了分析。本工作还收集和介绍了烟碱的分离、分离和鉴定的分析技术资料。本文还进一步讨论了类黄酮类植物化学物质的生物学意义,以了解烟碱在医学上的生物学意义,因为它属于类黄酮类。结果:科学的数据分析揭示了烟氟素的治疗作用和药理作用。烟碱对冠状病毒、缺血、肾功能损害、肝脏并发症、记忆功能障碍和心肌梗死具有显著的生物学潜力。本工作还讨论了烟碱对α-葡萄糖苷酶和α-淀粉酶、多发性骨髓瘤细胞和胰岛素分泌的生物学潜力。分析数据揭示了现代医学分析工具对烟碱的分离、分离和定量的意义。结论:通过对不同研究成果的科学数据分析,揭示了烟氟素在医学上的生物学重要性和治疗潜力。
{"title":"Medicinal Importance, Pharmacological Activities and Analytical Aspects of a Flavonoid Glycoside 'Nicotiflorin' in the Medicine.","authors":"Dinesh Kumar Patel","doi":"10.2174/1872312815666220404110200","DOIUrl":"https://doi.org/10.2174/1872312815666220404110200","url":null,"abstract":"<p><strong>Background: </strong>Herbal products are derived from different natural sources, mainly used as a source of food material and medicine in the health sectors since ancient times. Herbal products have gained popularity in modern medicine due to their beneficial health properties and pharmacological activities. Flavonoids are an important class of secondary metabolites found to be present in medicinal plants and their derived products. Flavonoids have been known for their anti-allergic, anti-bacterial, anti-diabetic, anti-inflammatory, anti-viral, anti-proliferative, anti-mutagenic, antithrombotic, anti-carcinogenic, anti-oxidant and hepatoprotective activities in the medicine. Nicotiflorin is a flavonoidal class phytochemical, found in medicinal plants, including Traditional Chinese medicine.</p><p><strong>Methods: </strong>Scientific data on the medicinal importance and pharmacological activities of nicotiflorin have been collected and analyzed in the present work in order to know the therapeutic importance of nicotiflorin in medicine. Scientific data have been collected from Google, Google Scholar, Science Direct, PubMed and Scopus and analyzed in the present work. Analytical techniques data of separation, isolation and identification of nicotiflorin have also been collected and presented in the current work. Further biological importance of flavonoidal class phytochemicals was also discussed in the present work to understand the biological importance of nicotiflorin in medicine as it belongs to the flavonoid class.</p><p><strong>Results: </strong>Scientific data analysis revealed the therapeutic importance and pharmacological activities of nicotiflorin. Nicotiflorin has significant biological potential against coronavirus, ischemia, renal impairment, hepatic complication, memory dysfunction and myocardial infarction. The biological potential of nicotiflorin against α-glucosidase and α-amylase enzymes, multiple myeloma cells and insulin secretion has also been discussed in the present work. Analytical data revealed the significance of modern analytical tools in medicine for the isolation, separation and quantification of nicotiflorin.</p><p><strong>Conclusion: </strong>Scientific data analysis of different research works revealed the biological importance and therapeutic potential of nicotiflorin in medicine.</p>","PeriodicalId":72844,"journal":{"name":"Drug metabolism and bioanalysis letters","volume":"15 1","pages":"2-11"},"PeriodicalIF":0.0,"publicationDate":"2022-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"10394347","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 5
Investigation of Human in vivo Metabolism of SEP-227900 Using the Samples from First-in-Human Study by LC-HRMS/UV and NMR. 用LC-HRMS/UV和NMR研究SEP-227900在人体内的代谢。
Pub Date : 2022-01-01 DOI: 10.2174/1872312815666220302161959
Yu-Luan Chen, Estela Skende, Armand Gatien Ngounou Wetie, Peter Li-Quan Wang

Objective: The study aims to explore the human in vivo metabolism of SEP-227900 (4H-furo[3, 2-b] pyrrole-carboxylic acid, m.w 151.03), a D-amino-acid oxidase (DAAO) inhibitor, by using plasma and urine samples from first-in-human study.

Methods: The human plasma and urine samples were from a single dose cohort that consisted of 9 healthy male volunteers each received an 80- mg dose of SEP-227900 orally. The pooled pre-dose urine and the pooled 0-24 h urine sample were created across 9 subjects by equal volume. Plasma samples were pooled by equal volume across 9 subjects to obtain 0-12 h plasma for metabolite searching, and also pooled by timepoints across 9 subjects to obtain 0.5, 5, and 12-h plasma for semi-quantitation. The plasma was de-proteinized by acetonitrile (1:3 v/v plasma-acetonitrile), then the supernatant was dried down, reconstituted, and injected for LC-HRMS/UV analysis. The urine sample was just simply centrifuged before analysis. LC-HRMS/UV was utilized to search predictable and unknown metabolites and estimate their relative abundances. Accurate mass measurement by Orbitrap-MS and MS/MS was used for metabolite identification. Chromatographic separation was achieved on a MACMOD AQ C8 column (250 × 4.6 mm, 5-μm) with a gradient mobile phase (A: 10 mM NH4Ac; B: acetonitrile; flowrate: 0.700 ml/min) for a total run-time of 65 min. The definite position in the molecule for the glucuronidation metabolism was characterized by the detected migration phenomenon, methylation with diazomethane (CH2N2), and NMR.

Results: Unchanged parent drug and four metabolite peaks were detected in humans: M1 was a mono-oxidative metabolite of SEP-227900; M2 was a glucuronide conjugate of SEP-227900; M3 was a glycine conjugate of SEP-227900; M4 was a glycine conjugate of M1. The specific position of the oxidation in M1 solely based on the mass spectral (MS and MS/MS) data was not identified. However, for the major metabolite M2, the acyl glucuronidation was unambiguously determined through multiple pieces of experimental evidence such as the observation of a migration pattern, mono-methylation by diazomethane, and NMR measurement. This determination is of significance related to the safety evaluation of investigational new drug development. The glycine conjugate of SEP-227900, i.e., M3, was found to be the most abundant metabolite in human urine (approximately 3-fold higher level than the glucuronide level). All together (mainly glycine-conjugate and glucuronide), it resulted in greater than 80% of the dosed amount in urine excretion (a separate measurement showed 23% of the dosed amount in urine excretion as the glucuronide).

Conclusion: Four metabolites were found in humans: SEP-227900-glycine conjugate, SEP- 227900-glucuronide, mono-oxidative metabolite, and its consequent glycine conjugate. The glucuronide metabolite wa

目的:通过首次人体试验的血浆和尿液样本,探讨d -氨基酸氧化酶(DAAO)抑制剂SEP-227900 (4h -呋喃[3,2 -b]吡咯-羧酸,m.w 151.03)的体内代谢情况。方法:人类血浆和尿液样本来自一个单剂量队列,由9名健康男性志愿者组成,每人口服80 mg剂量的SEP-227900。在9名受试者中按等体积制作了混合的给药前尿液和混合的0-24小时尿液样本。将9名受试者的血浆样本按等体积汇总,获得0-12 h的血浆用于代谢物搜索,并按时间点汇总,获得0.5、5和12 h的血浆进行半定量。血浆用乙腈(1:3 v/v血浆-乙腈)去蛋白,然后将上清干燥,重组,注入LC-HRMS/UV分析。尿液样本在分析前只是简单地进行了离心。LC-HRMS/UV用于搜索可预测和未知的代谢物,并估计其相对丰度。代谢产物鉴定采用Orbitrap-MS和MS/MS进行精确质量测定。色谱柱为MACMOD AQ C8 (250 × 4.6 mm, 5-μm),流动相为梯度流动相(a: 10 mm NH4Ac;B:乙腈;流速:0.700 ml/min),总运行时间为65 min。葡萄糖醛酸化代谢在分子中的确切位置通过检测到的迁移现象、重氮甲烷(CH2N2)甲基化和NMR来表征。结果:在人体内检测到原药不变和4个代谢峰:M1为SEP-227900的单氧化代谢物;M2为SEP-227900的葡萄糖醛酸缀合物;M3为SEP-227900的甘氨酸偶联物;M4是M1的甘氨酸共轭物。仅根据质谱(MS和MS/MS)数据无法确定M1中氧化的具体位置。然而,对于主要代谢物M2,通过观察迁移模式、重氮甲烷单甲基化和核磁共振测量等多项实验证据,明确确定了酰基葡萄糖醛酸化。这一确定对新药研发的安全性评价具有重要意义。SEP-227900的甘氨酸缀合物,即M3,被发现是人类尿液中最丰富的代谢物(大约是葡萄糖醛酸水平的3倍)。所有这些加在一起(主要是甘氨酸偶联物和葡萄糖醛酸),导致尿排泄剂量的80%以上(另一项测量显示尿排泄剂量的23%为葡萄糖醛酸)。结论:SEP-227900-甘氨酸偶联物、SEP-227900-葡萄糖醛酸、单氧化代谢物及其相应的甘氨酸偶联物在人体中发现了4种代谢物。葡萄糖醛酸代谢产物鉴定为酰基葡萄糖醛酸。超过80%剂量量的SEP-227900通过尿液排出体外,主要以甘氨酸和葡萄糖醛酸缀合物的形式排出体外。
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引用次数: 0
Role of P34S, G169R, R296C, and S486T Substitutions in Ligand Access and Catalysis for Cytochrome P450 2D6 Allelic Variants CYP2D6*14A and CYP2D6*14B. P34S、G169R、R296C和S486T取代在细胞色素P450 2D6等位变异CYP2D6*14A和CYP2D6*14B的配体通路和催化中的作用
Pub Date : 2022-01-01 DOI: 10.2174/1872312815666220113125232
Amelia Nathania Dong, Nafees Ahemad, Yan Pan, Uma Devi Palanisamy, Beow Chin Yiap, Chin Eng Ong

Background: Genetic polymorphism of cytochrome P450 (CYP) contributes to variability in drug metabolism, clearance, and response. This study aimed to investigate the functional and molecular basis for altered ligand binding and catalysis in CYP2D6*14A and CYP2D6*14B, two unique alleles common in the Asian population.

Methods: CYP proteins expressed in Escherichia coli were studied using the substrate 3-cyano-7- ethoxycoumarin (CEC) and inhibitor probes (quinidine, fluoxetine, paroxetine, terbinafine) in the enzyme assay. Computer modelling was additionally used to create three-dimensional structures of the CYP2D6*14 variants.

Results: Kinetics data indicated significantly reduced intrinsic clearance in CYP2D6*14 variants, suggesting that P34S, G169R, R296C, and S486T substitutions worked cooperatively to alter the conformation of the active site that negatively impacted the deethylase activity of CYP2D6. For the inhibition studies, IC50 values decreased in quinidine, paroxetine, and terbinafine but increased in fluoxetine, suggesting a varied ligand-specific susceptibility to inhibition. Molecular docking further demonstrated the role of P34S and R296C in altering access channel dimensions, thereby affecting ligand access and binding and subsequently resulting in varied inhibition potencies.

Conclusion: In summary, the differential selectivity of CYP2D6*14 variants for the ligands (substrate and inhibitor) was governed by the alteration of the active site and access channel architecture induced by the natural mutations found in the alleles.

背景:细胞色素P450 (CYP)的遗传多态性有助于药物代谢、清除和反应的变异性。本研究旨在探讨亚洲人群中常见的两个独特等位基因CYP2D6*14A和CYP2D6*14B的配体结合和催化改变的功能和分子基础。方法:采用底物3-氰-7-乙氧基香豆素(CEC)和抑制剂探针(奎尼丁、氟西汀、帕罗西汀、特比萘芬)对大肠杆菌中表达的CYP蛋白进行酶分析。此外,还使用计算机建模来创建CYP2D6*14变体的三维结构。结果:动力学数据显示CYP2D6*14变异的内在清除率显著降低,表明P34S、G169R、R296C和S486T置换协同作用,改变了活性位点的构象,从而对CYP2D6去乙基酶活性产生负面影响。在抑制研究中,奎尼丁、帕罗西汀和特比萘芬的IC50值降低,但氟西汀的IC50值升高,表明不同配体对抑制的敏感性不同。分子对接进一步证明了P34S和R296C在改变通路尺寸方面的作用,从而影响配体的进入和结合,从而导致不同的抑制能力。结论:综上所述,CYP2D6*14变异对配体(底物和抑制剂)的差异选择性是由等位基因的自然突变引起的活性位点和通路结构的改变所决定的。
{"title":"Role of P34S, G169R, R296C, and S486T Substitutions in Ligand Access and Catalysis for Cytochrome P450 2D6 Allelic Variants CYP2D6*14A and CYP2D6*14B.","authors":"Amelia Nathania Dong,&nbsp;Nafees Ahemad,&nbsp;Yan Pan,&nbsp;Uma Devi Palanisamy,&nbsp;Beow Chin Yiap,&nbsp;Chin Eng Ong","doi":"10.2174/1872312815666220113125232","DOIUrl":"https://doi.org/10.2174/1872312815666220113125232","url":null,"abstract":"<p><strong>Background: </strong>Genetic polymorphism of cytochrome P450 (CYP) contributes to variability in drug metabolism, clearance, and response. This study aimed to investigate the functional and molecular basis for altered ligand binding and catalysis in CYP2D6*14A and CYP2D6*14B, two unique alleles common in the Asian population.</p><p><strong>Methods: </strong>CYP proteins expressed in Escherichia coli were studied using the substrate 3-cyano-7- ethoxycoumarin (CEC) and inhibitor probes (quinidine, fluoxetine, paroxetine, terbinafine) in the enzyme assay. Computer modelling was additionally used to create three-dimensional structures of the CYP2D6*14 variants.</p><p><strong>Results: </strong>Kinetics data indicated significantly reduced intrinsic clearance in CYP2D6*14 variants, suggesting that P34S, G169R, R296C, and S486T substitutions worked cooperatively to alter the conformation of the active site that negatively impacted the deethylase activity of CYP2D6. For the inhibition studies, IC50 values decreased in quinidine, paroxetine, and terbinafine but increased in fluoxetine, suggesting a varied ligand-specific susceptibility to inhibition. Molecular docking further demonstrated the role of P34S and R296C in altering access channel dimensions, thereby affecting ligand access and binding and subsequently resulting in varied inhibition potencies.</p><p><strong>Conclusion: </strong>In summary, the differential selectivity of CYP2D6*14 variants for the ligands (substrate and inhibitor) was governed by the alteration of the active site and access channel architecture induced by the natural mutations found in the alleles.</p>","PeriodicalId":72844,"journal":{"name":"Drug metabolism and bioanalysis letters","volume":"15 1","pages":"51-63"},"PeriodicalIF":0.0,"publicationDate":"2022-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"10392826","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 1
In Vitro Inhibitory Effects of Agarwood Tea (Aquilaria malaccensis Lamk) Aqueous Extract on Human Cytochrome P450 (CYP) Enzyme Activities. 沉香茶水提物对人细胞色素P450 (CYP)酶活性的体外抑制作用
Pub Date : 2022-01-01 DOI: 10.2174/1872312815666220707114744
Pan Yan, Ung Yee Tze, Premika A/P R Jagadish, Lim Kuan Hon, Lamia Noushin Sadeque Chowdhury, Shang Tao, Ong Chin Eng

Background: Agarwood tea derived from Aquilaria malaccensis Lamk is becoming an increasingly popular herbal drink that is said to have multiple health benefits. Co-administration of this tea and clinical used drugs is possible, but it increases the risk of drug-herb interactions.

Objective: This in vitro study investigated the inhibitory effects of agarwood tea aqueous extract on the eight major human drug-metabolising cytochrome P450 (CYP) enzyme activities.

Methods: High-throughput fluorescence-based Vivid® CYP450 screening kits were employed to obtain the enzyme activities before and after incubation with agarwood tea aqueous extract.

Results: Agarwood aqueous extract potently inhibited CYP2C9, CYP2D6, and CYP3A4 activities with Ki values of 5.1, 34.5, and 20.3μg/ml, respectively. The most likely inhibition mode responsible for these inhibitions was non-competitive inhibition. On the other hand, at 1000μg/ml, agarwood tea aqueous extract negligibly inhibited CYP1A2, CYP2B6, CYP2C19, CYP2E1, and CYP3A5 activities.

Conclusion: These findings can be used to design additional in vitro investigations using clinical relevant drug substrates for CYP2C9, CYP2D6, and CYP3A4. Subsequently, future studies can be conducted to determine potential interactions between agarwood tea aqueous extract and CYP using in vivo models.

背景:沉香茶是从沉香木中提取的,正成为一种越来越受欢迎的草药饮料,据说有多种健康益处。这种茶和临床使用的药物联合使用是可能的,但它增加了药物-草药相互作用的风险。目的:研究沉香茶水提物对人体8种主要药物代谢细胞色素P450 (CYP)酶活性的抑制作用。方法:采用高通量荧光Vivid®CYP450筛选试剂盒,测定沉香茶水提物孵育前后的酶活性。结果:沉香水提物对CYP2C9、CYP2D6、CYP3A4活性有明显抑制作用,Ki值分别为5.1、34.5、20.3μg/ml。最有可能导致这些抑制的抑制模式是非竞争性抑制。在1000μg/ml浓度下,沉香茶水提物对CYP1A2、CYP2B6、CYP2C19、CYP2E1和CYP3A5活性的抑制作用可忽略。结论:这些发现可以为CYP2C9、CYP2D6和CYP3A4的临床相关药物底物设计更多的体外研究。随后,未来的研究可以通过体内模型来确定沉香茶水提取物与CYP之间潜在的相互作用。
{"title":"<i>In Vitro</i> Inhibitory Effects of Agarwood Tea (<i>Aquilaria malaccensis</i> Lamk) Aqueous Extract on Human Cytochrome P450 (CYP) Enzyme Activities.","authors":"Pan Yan,&nbsp;Ung Yee Tze,&nbsp;Premika A/P R Jagadish,&nbsp;Lim Kuan Hon,&nbsp;Lamia Noushin Sadeque Chowdhury,&nbsp;Shang Tao,&nbsp;Ong Chin Eng","doi":"10.2174/1872312815666220707114744","DOIUrl":"https://doi.org/10.2174/1872312815666220707114744","url":null,"abstract":"<p><strong>Background: </strong>Agarwood tea derived from Aquilaria malaccensis Lamk is becoming an increasingly popular herbal drink that is said to have multiple health benefits. Co-administration of this tea and clinical used drugs is possible, but it increases the risk of drug-herb interactions.</p><p><strong>Objective: </strong>This in vitro study investigated the inhibitory effects of agarwood tea aqueous extract on the eight major human drug-metabolising cytochrome P450 (CYP) enzyme activities.</p><p><strong>Methods: </strong>High-throughput fluorescence-based Vivid® CYP450 screening kits were employed to obtain the enzyme activities before and after incubation with agarwood tea aqueous extract.</p><p><strong>Results: </strong>Agarwood aqueous extract potently inhibited CYP2C9, CYP2D6, and CYP3A4 activities with Ki values of 5.1, 34.5, and 20.3μg/ml, respectively. The most likely inhibition mode responsible for these inhibitions was non-competitive inhibition. On the other hand, at 1000μg/ml, agarwood tea aqueous extract negligibly inhibited CYP1A2, CYP2B6, CYP2C19, CYP2E1, and CYP3A5 activities.</p><p><strong>Conclusion: </strong>These findings can be used to design additional in vitro investigations using clinical relevant drug substrates for CYP2C9, CYP2D6, and CYP3A4. Subsequently, future studies can be conducted to determine potential interactions between agarwood tea aqueous extract and CYP using in vivo models.</p>","PeriodicalId":72844,"journal":{"name":"Drug metabolism and bioanalysis letters","volume":"15 3","pages":"178-191"},"PeriodicalIF":0.0,"publicationDate":"2022-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"10399172","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Role of the Gut Microbiome in Diabetes and Cardiovascular Diseases Including Restoration and Targeting Approaches- A Review. 肠道微生物群在糖尿病和心血管疾病中的作用及其修复和靶向方法综述
Pub Date : 2022-01-01 DOI: 10.2174/2949681015666220615120300
Alka Ahuja, Saraswathy Mp, Nandakumar S, Arul Prakash F, Gurpreet Kn, Dhanalekshmi Um

Metabolic diseases, including cardiovascular diseases (CVD) and diabetes, have become the leading cause of morbidity and mortality worldwide. Gut microbiota appears to play a vital role in human disease and health, according to recent scientific reports. The gut microbiota plays an important role in sustaining host physiology and homeostasis by creating a cross-talk between the host and microbiome via metabolites obtained from the host's diet. Drug developers and clinicians rely heavily on therapies that target the microbiota in the management of metabolic diseases, and the gut microbiota is considered the biggest immune organ in the human body. They are highly associated with intestinal immunity and systemic metabolic disorders like CVD and diabetes and are reflected as potential therapeutic targets for the management of metabolic diseases. This review discusses the mechanism and interrelation between the gut microbiome and metabolic disorders. It also highlights the role of the gut microbiome and microbially derived metabolites in the pathophysiological effects related to CVD and diabetes. It also spotlights the reasons that lead to alterations of microbiota composition and the prominence of gut microbiota restoration and targeting approaches as effective treatment strategies in diabetes and CVD. Future research should focus onunderstanding the functional level of some specific microbial pathways that help maintain physiological homeostasis, multi-omics, and develop novel therapeutic strategies that intervene with the gut microbiome for the prevention of CVD and diabetes that contribute to a patient's well-being.

代谢性疾病,包括心血管疾病(CVD)和糖尿病,已经成为世界范围内发病率和死亡率的主要原因。根据最近的科学报告,肠道微生物群似乎在人类疾病和健康中起着至关重要的作用。肠道微生物群通过从宿主饮食中获得的代谢物在宿主和微生物群之间产生串扰,在维持宿主生理和体内平衡中起着重要作用。药物开发人员和临床医生在代谢疾病的治疗中严重依赖针对微生物群的治疗,而肠道微生物群被认为是人体最大的免疫器官。它们与肠道免疫和全身代谢紊乱(如心血管疾病和糖尿病)高度相关,是代谢性疾病管理的潜在治疗靶点。本文综述了肠道微生物群与代谢紊乱的机制及其相互关系。它还强调了肠道微生物组和微生物衍生代谢物在与心血管疾病和糖尿病相关的病理生理效应中的作用。它还强调了导致微生物群组成改变的原因,以及肠道微生物群恢复和靶向方法作为糖尿病和心血管疾病有效治疗策略的重要性。未来的研究应侧重于了解一些有助于维持生理稳态的特定微生物途径的功能水平,多组学,并开发新的治疗策略,干预肠道微生物群,预防心血管疾病和糖尿病,有助于患者的健康。
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引用次数: 1
Practical Application of Rodent Transporter Knockout Models to Assess Brain Penetration in Drug Discovery. 啮齿动物转运蛋白敲除模型在药物开发中评估脑渗透的实际应用。
Pub Date : 2022-01-01 DOI: 10.2174/1872312815666220222091032
Elin Eneberg, Christopher R Jones, Thomas Jensen, Kristine Langthaler, Christoffer Bundgaard

Background and objective: Compound X is a drug candidate for the treatment of neurodegenerative diseases. Its brain distribution was evaluated as part of the lead identification and optimization activities undertaken in early drug discovery.

Methods: The brain distribution of compound X was studied in genetic transporter knockout rodent models, in vivo models with a chemical inhibitor, and in vitro transporter cell systems.

Results: Compound X was found to be a substrate for human Breast Cancer-Resistance Protein (BCRP) in vitro (efflux ratio 8.1) and rodent Bcrp in vivo (Kp, uuKO/Kp, uuWT = 0.15/0.057 = 2.7, p< 0.05) but not a substrate for human P-glycoprotein (P-gp) in vitro (efflux ratio 1.0) nor rodent P-gp in vivo (Kp, uuKO/Kp, uuWT = 0.056/ 0.051 = 1.1, p> 0.05). When both transporters were knocked out in vivo, Kp, uu increased to 0.51±0.02. A similar pattern observed across compounds with related chemistry corroborating the structure-activity relationship.

Conclusion: While in vitro assays showed compound X to be a substrate for human BCRP and not P-gp, in vivo studies indicated a synergistic effect between rodent efflux transporters. However, this only accounted for ~50% of restricted BBB-transport, suggesting involvement of other efflux transporters. Considering Kp, uu as a key criterion for assessing the technical quality of CNS candidates before progression into clinical development, it is important to identify relevant screening assays for a better understanding of low Kp, uu and brain distribution in pre-clinical models for translation to humans.

背景与目的:化合物X是一种治疗神经退行性疾病的候选药物。它的大脑分布被评估为早期药物发现中进行的先导识别和优化活动的一部分。方法:研究化合物X在遗传转运蛋白敲除啮齿动物模型、化学抑制剂在体内模型和体外转运细胞系统中的脑分布。结果:化合物X是人乳腺癌抵抗蛋白(BCRP)体外(外排比8.1)和啮齿动物体内BCRP (Kp, uuKO/Kp, uuWT = 0.15/0.057 = 2.7, p< 0.05)的底物,但不是人p -糖蛋白(p -gp)体外(外排比1.0)和啮齿动物体内p -gp (Kp, uuKO/Kp, uuWT = 0.056/ 0.051 = 1.1, p> 0.05)的底物。在体内敲除两种转运蛋白后,Kp, uu增加到0.51±0.02。在具有相关化学性质的化合物中观察到类似的模式,证实了结构-活性关系。结论:虽然体外实验表明化合物X是人BCRP的底物,而不是P-gp,但体内研究表明啮齿动物外排转运蛋白之间存在协同作用。然而,这仅占受限血脑屏障转运的约50%,表明涉及其他外排转运蛋白。考虑到Kp、uu是在进入临床开发之前评估CNS候选药物技术质量的关键标准,确定相关的筛选方法以更好地了解低Kp、uu和临床前模型中用于转化为人类的大脑分布是很重要的。
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引用次数: 1
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Drug metabolism and bioanalysis letters
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