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Expert opinion on medical diagnostics最新文献

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Molecular diagnosis of hemochromatosis. 血色素沉着症的分子诊断。
Pub Date : 2013-03-01 Epub Date: 2013-01-23 DOI: 10.1517/17530059.2013.763794
Alberto Piperno

Introduction: The discovery of hemochromatosis genes and the availability of molecular-genetic tests considerably modified the knowledge of the disease relative to physiopathology, penetrance, and expression, and had major impact in the diagnostic settings.

Areas covered: Hemochromatosis is a heterogenous disorder at both genetic and phenotypic level. The review discusses criteria to define patients' iron phenotype and to use molecular tests to diagnose HFE-related and non-HFE hemochromatosis. The material examined includes articles published in the journals covered by PubMed US National Library of Medicine. The author has been working in the field of iron overload diseases for several years and has contributed 18 of the papers cited in the references.

Expert opinion: Hemochromatosis genotyping is inseparable from phenotype characterization. A full clinical assessment is needed and DNA test performed when data suggest a clear indication of suspicion of being at risk for HH. HFE testing for p.Cys282Tyr mutation and p.His63Asp variant is the first molecular diagnostic step. Genotyping for rare mutations can be offered to patients with negative first-level HFE testing who have iron overload with no other explanation and should be performed in referral centers for iron overload disorders that can provide genetic advice and in-house genotyping services.

简介:血色素沉着症基因的发现和分子基因检测的可用性极大地改变了人们对该疾病的生理病理、外显率和表达的认识,并对诊断环境产生了重大影响。涉及领域:血色素沉着症是一种遗传和表型水平的异质性疾病。本文讨论了确定患者铁表型的标准,以及使用分子检测诊断hfe相关和非hfe血色素沉着症。检查的材料包括发表在PubMed美国国家医学图书馆覆盖的期刊上的文章。作者在铁超载疾病领域工作多年,在参考文献中引用了18篇论文。专家意见:血色素沉着症基因分型与表型表征是分不开的。当数据明确显示怀疑有HH风险时,需要进行全面的临床评估和DNA检测。HFE检测p.Cys282Tyr突变和p.c his63asp突变是分子诊断的第一步。罕见突变的基因分型可提供给一级HFE检测阴性且铁超载无其他解释的患者,应在铁超载疾病的转诊中心进行,这些转诊中心可以提供遗传建议和内部基因分型服务。
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引用次数: 19
Novel biomarkers for bipolar disorder. 双相情感障碍的新生物标志物。
Pub Date : 2013-03-01 Epub Date: 2012-12-16 DOI: 10.1517/17530059.2013.734807
Antonio Lucio Teixeira, Izabela Guimarães Barbosa, Rodrigo Machado-Vieira, Lucas Bortolotto Rizzo, Andrea Wieck, Moisés E Bauer

Introduction: Bipolar disorder is diagnosed on the basis of patient and/or family reports and behavioral observation. Traditionally regarded as an affective disorder involving behavioral changes, bipolar disorder has been reconceptualized as a multisystem disease associated with mood, cognitive, metabolic, autonomic and sleep/wake dysfunctions. Accordingly, recent studies have focused on the identification of biomarkers related to the pathophysiological mechanisms underlying the development, clinical presentation and course of bipolar disorder.

Areas covered: This article provides an overview of the available literature regarding circulating peripheral and neuroimaging biomarkers in bipolar disorder. Neurotrophic factors, immune parameters, oxidative stress parameters, hormones and neuroimaging findings were taken into consideration.

Expert opinion: Biomarkers research in bipolar disorder is a new field with an expanding knowledge. Current evidence suggests that a single biomarker will not be able to cover the biological and clinical complexity of bipolar disorder. Alternatively, a composite of biomarkers, including neurotrophic factors, cytokines and oxidative stress molecules, may be promising to identify altered mood states and neuroprogression in bipolar disorder.

导读:双相情感障碍的诊断是基于患者和/或家庭报告和行为观察。传统上,双相情感障碍被认为是一种涉及行为改变的情感障碍,现在双相情感障碍被重新定义为一种与情绪、认知、代谢、自主神经和睡眠/觉醒功能障碍相关的多系统疾病。因此,最近的研究集中在识别与双相情感障碍发展、临床表现和病程相关的病理生理机制的生物标志物上。涵盖领域:本文概述了关于双相情感障碍循环外周和神经成像生物标志物的现有文献。考虑了神经营养因子、免疫参数、氧化应激参数、激素和神经影像学结果。专家意见:双相情感障碍的生物标志物研究是一个不断扩大的新领域。目前的证据表明,单一的生物标志物将无法涵盖双相情感障碍的生物学和临床复杂性。另外,包括神经营养因子、细胞因子和氧化应激分子在内的生物标志物的组合,可能有望识别双相情感障碍中改变的情绪状态和神经进展。
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引用次数: 30
Accuracy and limitations of diagnostic methods for avascular necrosis of the hip. 髋关节缺血性坏死诊断方法的准确性和局限性。
Pub Date : 2013-03-01 Epub Date: 2013-01-18 DOI: 10.1517/17530059.2013.757592
Apostolos H Karantanas

Introduction: Femoral head avascular necrosis (FHAVN) is the result of irreversible anoxia of the subchondral bone. The death of bone cells can cause articular collapse and pain, and in turn usually leads to degenerative arthritis. FHAVN is a common disorder, affecting mainly young male adults. Reliability, accuracy and prognostic value of any classification system are important in evaluation and treatment of FHAVN.

Areas covered: Although in the past, scintigraphy and CT and more recently PET have been used for diagnosing AVN, currently the most important imaging methods included in the most widely used classification systems, consist of radiographs and magnetic resonance imaging (MRI). The latter is used in major classification systems for early detection (pre-radiographic stage) of FHAVN and for assessing lesion size and location before collapse of the articular surface occurs. The purpose of this review is to present the current data regarding the accuracy of the X-rays and MRI in diagnosing, monitoring and postoperative evaluation of FHAVN.

Expert opinion: The author's opinion is that MRI may contribute to improve staging, investigate radiologically occult collapse, depict other causes of disability and pain, assess prognosis and evaluate treatment. Newer MRI techniques, such as diffusion-weighted imaging and perfusion imaging, have not yet provided additional and clinically useful information.

股骨头缺血性坏死(FHAVN)是软骨下骨不可逆缺氧的结果。骨细胞的死亡会引起关节塌陷和疼痛,进而通常会导致退行性关节炎。FHAVN是一种常见的疾病,主要影响年轻成年男性。任何分类系统的可靠性、准确性和预后价值在FHAVN的评估和治疗中都是重要的。涵盖领域:虽然在过去,闪烁成像和CT以及最近的PET已被用于诊断AVN,但目前最广泛使用的分类系统中最重要的成像方法包括x线摄影和磁共振成像(MRI)。后者在主要的分类系统中用于FHAVN的早期检测(放射前阶段),并在发生关节面塌陷之前评估病变的大小和位置。本综述的目的是介绍关于FHAVN诊断、监测和术后评估的x线和MRI准确性的最新数据。专家意见:作者的观点是,MRI可能有助于改善分期,调查放射隐匿性塌陷,描述残疾和疼痛的其他原因,评估预后和评估治疗。较新的MRI技术,如弥散加权成像和灌注成像,尚未提供额外的和临床有用的信息。
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引用次数: 31
Neutrophil gelatinase-associated lipocalin as diagnostic and prognostic tool for cardiovascular disease and heart failure. 中性粒细胞明胶酶相关脂钙蛋白作为心血管疾病和心力衰竭的诊断和预后工具
Pub Date : 2013-03-01 Epub Date: 2013-01-25 DOI: 10.1517/17530059.2013.763795
Navaid Iqbal, Rajiv Choudhary, Jeffrey Chan, Bailey Wentworth, Erin Higginbotham, Alan S Maisel

Introduction: Cardiovascular disease (CVD) has been a burden on the healthcare system for decades and has increased the need for earlier diagnosis, better risk stratification and cost- effective treatment to reduce the rates of hospitalization. Biomarker research has broadened our knowledge base, shedding more light on the underlying pathophysiological mechanisms associated with the development of heart disorders. Recent technological advances have made it possible to use noninvasive and cost-effective biomarkers for identifying patients who are at risk of developing coronary heart disease and atherosclerosis.

Areas covered: In this paper the authors review the development of neutrophil gelatinase-associated lipocalin (NGAL) as a cardiac biomarker, highlighting studies that validate its use in predicting acute changes in patients with an array of cardiac disorders, and stake a case for the use of NGAL as a clinical diagnostic tool to predict outcomes in patients with CVD.

Expert opinion: The authors believe that NGAL should be used as a clinical diagnostic tool to predict outcomes in patients with CVD. Growing evidence has illustrated the biological role that neutrophils, such as NGAL, play in inflammation and atherosclerosis. Further studies are needed to determine NGAL's stability in serum and urine, and to substantiate its widespread use, but there are expanding possibilities for this biomarker in clinical practice.

几十年来,心血管疾病(CVD)一直是医疗保健系统的负担,并且增加了对早期诊断,更好的风险分层和成本有效治疗的需求,以降低住院率。生物标志物研究拓宽了我们的知识基础,揭示了与心脏疾病发展相关的潜在病理生理机制。最近的技术进步使得使用无创和具有成本效益的生物标志物来识别有患冠心病和动脉粥样硬化风险的患者成为可能。涉及领域:在本文中,作者回顾了中性粒细胞明胶酶相关脂钙蛋白(NGAL)作为心脏生物标志物的发展,重点介绍了其在预测一系列心脏疾病患者急性变化方面的研究,并提出了将NGAL作为预测心血管疾病患者预后的临床诊断工具的案例。专家意见:作者认为NGAL应作为预测心血管疾病患者预后的临床诊断工具。越来越多的证据表明,中性粒细胞,如NGAL,在炎症和动脉粥样硬化中起着生物学作用。需要进一步的研究来确定NGAL在血清和尿液中的稳定性,并证实其广泛使用,但这种生物标志物在临床实践中的可能性正在扩大。
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引用次数: 12
Efficacy of methods used for the diagnosis of bacterial vaginosis. 细菌性阴道病诊断方法的疗效分析。
Pub Date : 2013-03-01 Epub Date: 2013-01-03 DOI: 10.1517/17530059.2013.753876
Charlene W J Africa

Introduction: Bacterial vaginosis (BV) has been associated with pelvic inflammatory disease, adverse pregnancy outcomes, increased susceptibility to sexually transmitted infections and infertility. Diagnosis of BV should be rapid, reliable and safe. This is especially vital in pregnant women where intervention may be necessary for the well-being of both the mother and the foetus.

Areas covered: This paper consulted PUBMED, LISTA and Web of Science for point-of-care and laboratory-based tests commonly used for the diagnosis and management of BV in pregnant women. An overview of strengths and weaknesses of the methods used may partially explain why treatment plans have failed. Differences in sampling and detection methods, time of gestation, inter-examiner variability and interpretation of data, and the use of different reference tests, amongst many other factors, complicated a meta-analysis of the data.

Expert opinion: Inconsistencies found in clinical and laboratory detection methods used for the monitoring of treatment have a direct impact on success rates. With current advances in technology, the diagnosis of BV is taking on a new perspective. New information implicating specific vaginal biofilms in adverse pregnancy outcomes through the application of advanced technology promises to change the way we view the aetiology, diagnosis and management of BV.

细菌性阴道病(BV)与盆腔炎、不良妊娠结局、性传播感染易感性增加和不孕症有关。细菌性阴道炎的诊断应快速、可靠、安全。这对孕妇尤其重要,因为干预可能对母亲和胎儿的健康都是必要的。涉及领域:本文参考了PUBMED、LISTA和Web of Science,了解了通常用于诊断和管理孕妇细菌性感染的护理点和实验室检测。对所使用方法的优缺点的概述可能部分解释了治疗计划失败的原因。抽样和检测方法的差异、妊娠时间、检查者之间的差异和对数据的解释、不同参考测试的使用,以及许多其他因素,使数据的荟萃分析变得复杂。专家意见:用于监测治疗的临床和实验室检测方法中发现的不一致对成功率有直接影响。随着技术的进步,细菌性阴液炎的诊断正呈现出一个新的视角。通过先进技术的应用,新的信息表明特定的阴道生物膜与不良妊娠结局有关,有望改变我们对细菌性阴道炎病因、诊断和治疗的看法。
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引用次数: 11
Scleroderma: skin stiffness assessment using the stress-strain relationship under progressive suction. 硬皮病:在渐进吸力作用下,使用应力-应变关系评估皮肤刚度。
Pub Date : 2013-03-01 Epub Date: 2012-12-14 DOI: 10.1517/17530059.2013.753877
Gérald E Piérard, Trinh Hermanns-Lê, Claudine Piérard-Franchimont

Introduction: A few non-invasive biometrological methods are available for monitoring skin stiffening in systemic scleroderma. Among them, the Cutometer® is used for years by several clinical teams.

Objectives: To revisit the microscopic structure of the dermal fibrous networks in scleroderma and the relationship with changes in viscoelasticity.

Methods: The suction method delivered by the Cutometer® was applied following the progressive stress-vs-strain modality.

Results: The test procedure was sensitive enough to document the initial progression steps of acroscleroderma. Four stages were thus identified including i) the incipient, ii) the progressive, iii) the overt, and iv) the regressive acroscleroderma.

Conclusion: The non-invasive determination of skin biomechanical functions is relevant both in routine clinical practice and in antisclerotic drug development. It is complementary although not a substitute for the determination of selected serum biomarkers.

一些非侵入性的生物计量学方法可用于监测系统性硬皮病的皮肤硬化。其中,Cutometer®已被多个临床团队使用多年。目的:探讨硬皮病真皮纤维网的显微结构及其与粘弹性变化的关系。方法:采用Cutometer®提供的抽吸方法,采用渐进应力-应变模式。结果:测试程序足够敏感,可以记录肢硬皮病的初始进展步骤。因此确定了四个阶段,包括i)初期,ii)进行性,iii)显性和iv)退行性顶硬皮病。结论:皮肤生物力学功能的无创测定在常规临床实践和抗硬化药物开发中具有重要意义。它是一种补充,虽然不能替代选定的血清生物标志物的测定。
{"title":"Scleroderma: skin stiffness assessment using the stress-strain relationship under progressive suction.","authors":"Gérald E Piérard,&nbsp;Trinh Hermanns-Lê,&nbsp;Claudine Piérard-Franchimont","doi":"10.1517/17530059.2013.753877","DOIUrl":"https://doi.org/10.1517/17530059.2013.753877","url":null,"abstract":"<p><strong>Introduction: </strong>A few non-invasive biometrological methods are available for monitoring skin stiffening in systemic scleroderma. Among them, the Cutometer® is used for years by several clinical teams.</p><p><strong>Objectives: </strong>To revisit the microscopic structure of the dermal fibrous networks in scleroderma and the relationship with changes in viscoelasticity.</p><p><strong>Methods: </strong>The suction method delivered by the Cutometer® was applied following the progressive stress-vs-strain modality.</p><p><strong>Results: </strong>The test procedure was sensitive enough to document the initial progression steps of acroscleroderma. Four stages were thus identified including i) the incipient, ii) the progressive, iii) the overt, and iv) the regressive acroscleroderma.</p><p><strong>Conclusion: </strong>The non-invasive determination of skin biomechanical functions is relevant both in routine clinical practice and in antisclerotic drug development. It is complementary although not a substitute for the determination of selected serum biomarkers.</p>","PeriodicalId":72996,"journal":{"name":"Expert opinion on medical diagnostics","volume":"7 2","pages":"119-25"},"PeriodicalIF":0.0,"publicationDate":"2013-03-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1517/17530059.2013.753877","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"31336678","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 21
Critical assessment of diabetic xerosis. 糖尿病性干枯症的关键评估。
Pub Date : 2013-03-01 Epub Date: 2012-10-17 DOI: 10.1517/17530059.2013.728585
Gérald E Piérard, Claudine Piérard-Franchimont, André Scheen

Introduction: Diabetes mellitus is commonly responsible for skin changes including discrete to mild xerosis.

Areas covered: This review focuses on some selected relevant bioinstrumental methods assessing diabetes xerosis. Peer-reviewed articles on objective non-invasive methods were scrutinized. The reviewed methods address i) the xerosis severity grading scale, ii) corneodynamics referring to the desquamation rate, iii) electrometric assessment of skin hydration including skin capacitance mapping and iv) implication of the imperceptible perspiration. The subjective clinical assessment often fails to disclose diabetic xerosis with confidence and precision. By contrast, a multipronged biometrological approach identifies a cluster of diabetic patients who experience alterations in the structural and functional maturation of the stratum corneum.

Expert opinion: A multipronged biometrological approach helps identifying the changes in the stratum corneum of diabetic xerosis. There is a continuum between the 'dry skin' feeling, xerosis and ichthyosiform presentations, particularly on the shins and feet of diabetic patients.

简介:糖尿病通常会引起皮肤变化,包括轻微的干燥症。涉及领域:本文综述了一些相关的生物仪器方法评估糖尿病干燥。对客观非侵入性方法的同行评议文章进行了仔细审查。所回顾的方法涉及i)干燥严重程度分级量表,ii)角膜动力学(指脱屑率),iii)皮肤水化的电测量评估(包括皮肤电容测绘)和iv)难以感知的汗液的含义。主观的临床评估往往不能自信和准确地揭示糖尿病干燥症。相比之下,多管齐下的生物计量学方法确定了一组经历角质层结构和功能成熟改变的糖尿病患者。专家意见:多管齐下的生物计量学方法有助于识别糖尿病干燥症角质层的变化。在“皮肤干燥”感觉、干燥和鱼鳞样表现之间存在连续性,特别是在糖尿病患者的小腿和足部。
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引用次数: 15
Analytical performance validation of a coronary heart disease risk assessment multi-analyte proteomic test. 冠心病风险评估多分析物蛋白质组学试验的分析性能验证。
Pub Date : 2013-03-01 Epub Date: 2012-12-11 DOI: 10.1517/17530059.2013.753055
Niamh Nolan, Lilian Tee, Swathi Vijayakumar, Ivana Burazor, Evangelos Hytopoulos, William H Biggs, Michael Beggs, Cynthia French, Douglas S Harrington

Background: Coronary heart disease (CHD) remains prevalent despite efforts to improve CHD risk assessment. The authors developed a multi-analyte immunoassay-based CHD risk assessment (CHDRA) algorithm, clinically validated in a multicenter study, to improve CHDRA in intermediate risk individuals.

Objective: Clinical laboratory validation of the CHDRA biomarker assays' analytical performance.

Methods: Multiplexed immunoassay panels developed for the seven CHDRA assays were evaluated with donor sera in a clinical laboratory. Specificity, sensitivity, interfering substances and reproducibility of the CHDRA assays, along with the effects of pre-analytical specimen processing, were evaluated.

Results: Analytical measurements of the CHDRA panel proteins (CTACK, Eotaxin, Fas Ligand, HGF, IL-16, MCP-3 and sFas) exhibited acceptable accuracy (80 - 120%), cross-reactivity (< 1%), interference (< 30% at high concentrations of bilirubin, lipids, hemoglobin and HAMA), sensitivity and reproducibility (< 20% CV across multiple runs, operators and instruments). Recoveries from donor sera subjected to typical clinical laboratory pre-analytical conditions were within 80 - 120%. The pre-analytical variables did not substantively impact the CHDRA scores.

Conclusions: The CHDRA panel analytical validation in a clinical laboratory meets or exceeds the specifications established during the clinical utility studies. Risk score reproducibility across multiple test scenarios suggests the assays are not susceptible to clinical laboratory pre-analytical and analytical variation.

背景:尽管人们努力改善冠心病的风险评估,但冠心病(CHD)仍然普遍存在。作者开发了一种基于多分析物免疫测定的冠心病风险评估(CHDRA)算法,该算法在一项多中心研究中得到临床验证,以改善中度风险个体的CHDRA。目的:临床实验室验证CHDRA生物标志物分析方法的分析性能。方法:在临床实验室用供者血清评估用于7种CHDRA检测的多重免疫测定板。评估了CHDRA分析的特异性、敏感性、干扰物质和再现性,以及分析前样品处理的影响。结果:CHDRA面板蛋白(CTACK、Eotaxin、Fas配体、HGF、IL-16、MCP-3和sFas)的分析测量显示出可接受的准确性(80 - 120%)、交叉反应性(< 1%)、干扰(高浓度胆红素、脂质、血红蛋白和HAMA < 30%)、灵敏度和重复性(跨多个运行、操作人员和仪器的CV < 20%)。在典型的临床实验室前分析条件下,供体血清的回收率在80 - 120%之间。分析前变量对CHDRA评分没有实质性影响。结论:临床实验室的CHDRA小组分析验证符合或超过临床效用研究期间建立的规范。风险评分在多个测试场景中的可重复性表明,检测方法不容易受到临床实验室分析前和分析变化的影响。
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引用次数: 5
Novel biomarkers for the prediction of metastasis in colorectal cancer. 预测结直肠癌转移的新生物标志物。
Pub Date : 2013-03-01 Epub Date: 2012-12-14 DOI: 10.1517/17530059.2013.753054
Inti Zlobec

Introduction: In patients with metastatic colorectal cancers, multimodal management and the use of biological agents such as monoclonal antibodies have had major positive effects on survival. The ability to predict which patients may be at 'high risk' of distant metastasis could have major implications on patient management. Histomorphological, immunohistochemical or molecular biomarkers are currently being investigated in order to test their potential value as predictors of metastasis.

Areas covered: Here, the author reviews the clinical and functional data supporting the investigation of three novel promising biomarkers for the prediction of metastasis in patients with colorectal cancer: tumor budding, Raf1 kinase inhibitor protein (RKIP) and metastasis-associated in colon cancer-1 (MACC1).

Expert opinion: The lifespan of most potential biomarkers is short as evidenced by the rare cases that have successfully made their way into daily practice such as KRAS or microsatellite instability (MSI) status. Although the three biomarkers reviewed herein have the potential to become important predictive biomarkers of metastasis, they have similar hurdles to overcome before they can be implemented into clinical management: standardization and validation in prospective patient cohorts.

在转移性结直肠癌患者中,多模式管理和单克隆抗体等生物制剂的使用对生存率有重要的积极影响。预测哪些患者可能处于远处转移的“高风险”的能力可能对患者的治疗具有重要意义。目前正在研究组织形态学、免疫组织化学或分子生物标志物,以测试其作为转移预测因子的潜在价值。研究领域:在这里,作者回顾了支持三种新的有前景的生物标志物研究的临床和功能数据,用于预测结直肠癌患者的转移:肿瘤萌芽,Raf1激酶抑制剂蛋白(RKIP)和结肠癌转移相关蛋白(MACC1)。专家意见:正如KRAS或微卫星不稳定状态(MSI)等极少数成功应用于日常实践的案例所证明的那样,大多数潜在生物标志物的寿命都很短。尽管本文综述的三种生物标志物有可能成为重要的转移预测生物标志物,但在应用于临床管理之前,它们有类似的障碍需要克服:标准化和前瞻性患者队列的验证。
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引用次数: 17
Challenges in Biomarker Discovery: Combining Expert Insights with Statistical Analysis of Complex Omics Data. 生物标志物发现的挑战:结合专家见解和复杂组学数据的统计分析。
Pub Date : 2013-01-01 DOI: 10.1517/17530059.2012.718329
Jason E McDermott, Jing Wang, Hugh Mitchell, Bobbie-Jo Webb-Robertson, Ryan Hafen, John Ramey, Karin D Rodland

INTRODUCTION: The advent of high throughput technologies capable of comprehensive analysis of genes, transcripts, proteins and other significant biological molecules has provided an unprecedented opportunity for the identification of molecular markers of disease processes. However, it has simultaneously complicated the problem of extracting meaningful molecular signatures of biological processes from these complex datasets. The process of biomarker discovery and characterization provides opportunities for more sophisticated approaches to integrating purely statistical and expert knowledge-based approaches. AREAS COVERED: In this review we will present examples of current practices for biomarker discovery from complex omic datasets and the challenges that have been encountered in deriving valid and useful signatures of disease. We will then present a high-level review of data-driven (statistical) and knowledge-based methods applied to biomarker discovery, highlighting some current efforts to combine the two distinct approaches. EXPERT OPINION: Effective, reproducible and objective tools for combining data-driven and knowledge-based approaches to identify predictive signatures of disease are key to future success in the biomarker field. We will describe our recommendations for possible approaches to this problem including metrics for the evaluation of biomarkers.

引言:能够全面分析基因、转录本、蛋白质和其他重要生物分子的高通量技术的出现,为鉴定疾病过程的分子标记提供了前所未有的机会。然而,它同时使从这些复杂的数据集中提取生物过程的有意义的分子特征的问题变得复杂。生物标志物的发现和表征过程为更复杂的方法提供了机会,以整合纯粹的统计和基于专家知识的方法。涵盖领域:在这篇综述中,我们将介绍从复杂的基因组数据集中发现生物标志物的当前实践的例子,以及在获得有效和有用的疾病特征方面遇到的挑战。然后,我们将对应用于生物标志物发现的数据驱动(统计)和基于知识的方法进行高级回顾,重点介绍目前将这两种不同方法结合起来的一些努力。专家意见:结合数据驱动和基于知识的方法来识别疾病预测特征的有效、可重复和客观的工具是生物标志物领域未来成功的关键。我们将描述我们对解决这个问题的可能方法的建议,包括评估生物标志物的指标。
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引用次数: 161
期刊
Expert opinion on medical diagnostics
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