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Future perspectives: targeting fibroblast growth factor receptor 1 to enhance the efficacy of immunotherapy. 未来展望:以成纤维细胞生长因子受体1为靶点,提高免疫治疗效果。
Q3 Medicine Pub Date : 2025-06-20 eCollection Date: 2025-01-01 DOI: 10.37349/etat.2025.1002327
Ilya Tsimafeyeu

Fibroblast growth factor receptor 1 (FGFR1) plays a critical role in the progression of various cancers through its involvement in cell proliferation, survival, and differentiation. More recently, FGFR1 has been implicated in the mechanisms of immune evasion, particularly its role in resistance to immune checkpoint inhibitors (ICIs) such as pembrolizumab and nivolumab. Targeting FGFR1 with monoclonal antibodies and tyrosine kinase inhibitors has emerged as a promising therapeutic strategy to enhance ICI efficacy by altering the tumor microenvironment and countering immune suppression. Preclinical studies demonstrate that combining FGFR1 inhibitors, such as the novel monoclonal antibody OM-RCA-01, with ICIs significantly improves antitumor activity, enhancing T cell responses and cytokine production. This article explores the role of FGFR1 in cancer biology, its contribution to immunotherapy resistance, and the therapeutic potential of targeting FGFR1 to enhance the efficacy of ICIs.

成纤维细胞生长因子受体1 (FGFR1)通过参与细胞增殖、存活和分化,在各种癌症的进展中起着关键作用。最近,FGFR1与免疫逃避机制有关,特别是其在免疫检查点抑制剂(ICIs)如派姆单抗和纳武单抗的耐药性中的作用。用单克隆抗体和酪氨酸激酶抑制剂靶向FGFR1已成为一种有希望的治疗策略,通过改变肿瘤微环境和对抗免疫抑制来增强ICI疗效。临床前研究表明,FGFR1抑制剂(如新型单克隆抗体OM-RCA-01)与ICIs联合使用可显著提高抗肿瘤活性,增强T细胞反应和细胞因子的产生。本文探讨了FGFR1在癌症生物学中的作用,它对免疫治疗耐药性的贡献,以及靶向FGFR1增强ICIs疗效的治疗潜力。
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引用次数: 0
An overview of the feasibility of nanomedicine in pancreatic cancer theranostics. 纳米药物在胰腺癌治疗中的可行性综述。
Q3 Medicine Pub Date : 2025-06-18 eCollection Date: 2025-01-01 DOI: 10.37349/etat.2025.1002326
Kyriakos Kokkinogoulis, Aristomenis Kollas, David Simeonidis, Pavlos Papakostas, Kalliopi Platoni, Efstathios P Efstathopoulos, Mersini Makropoulou

Pancreatic ductal adenocarcinoma (PDAC) is among the top causes of cancer-induced mortality, frequently diagnosed too late to be treated effectively, due to the poor prognosis and the limited successful therapeutic options. Apart from the conventional treatments, new multimodal therapies have emerged utilizing different scientific fields for the improvement of the survival and quality of patients' lives. The advancement of nanotechnology leads the way to more personalized medicine and the use of targeted theranostics carriers for deep-seated cancers such as PDAC. New nanotechnology innovations such as specialized photo-sensitizing drug nanocarriers, can effectively improve photodynamic therapy (PDT) of PDAC and enhance phototherapy's action through surface plasmon resonance phenomenon, as another recently re-emerged non- or minimally invasive possible treatment of such diseases. Despite the scientific advancements, significant hurdles remain and many parameters need to be examined. However, the novel application of nano-biophotonic techniques and the convergence of different science fields offer promise for the treatment of difficult-to-treat diseases, like PDAC.

胰腺导管腺癌(PDAC)是癌症导致死亡的主要原因之一,由于预后不良和成功的治疗选择有限,经常诊断太晚而无法有效治疗。除了传统的治疗方法外,新的多模式治疗方法已经出现,利用不同的科学领域来改善患者的生存和生活质量。纳米技术的进步为更个性化的医疗和使用靶向治疗载体治疗像PDAC这样的深层次癌症开辟了道路。新的纳米技术创新,如专门的光敏药物纳米载体,可以有效地改善PDAC的光动力治疗(PDT),并通过表面等离子体共振现象增强光疗的作用,是最近重新出现的一种非或微创治疗这类疾病的可能方法。尽管科学取得了进步,但仍然存在重大障碍,需要审查许多参数。然而,纳米生物光子技术的新应用和不同科学领域的融合为治疗像PDAC这样的疑难杂症提供了希望。
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引用次数: 0
Comparison of outcomes of neoadjuvant chemotherapy in BRCA1- versus BRCA2-associated breast and ovarian cancers. BRCA1-与brca2相关乳腺癌和卵巢癌新辅助化疗结果的比较
Q3 Medicine Pub Date : 2025-06-18 eCollection Date: 2025-01-01 DOI: 10.37349/etat.2025.1002325
Anna Sokolenko, Tatiana Gorodnova, Diana Enaldieva, Anna Shestakova, Alexandr Ivantsov, Anna Nyuganen, Igor Berlev, Petr Krivorotko, Alexey Belyaev, Evgeny Imyanitov

Aim: BRCA1/2-associated breast and ovarian carcinomas are often regarded as a single entity, assuming that BRCA1 and BRCA2 genes are almost equivalent with regard to their clinical significance. However, BRCA1 and BRCA2 genes differ in their function; therefore, a comparison of treatment outcomes in BRCA1 vs. BRCA2 carriers is warranted.

Methods: This study focused on consecutive patients treated with neoadjuvant chemotherapy (NACT), given that these subjects are treatment-naive and accessible for immediate assessment of pathological and clinical outcomes.

Results: BRCA2-associated high-grade serous ovarian carcinomas (HGSOCs) demonstrated significantly higher rates of pathologic complete response (pCR) as compared to BRCA1-related cancers [8/15 (53%) vs. 7/48 (15%), P = 0.004]. In contrast, HER2-negative breast cancer (BC) patients showed a numerically higher rate of pCR in BRCA1 vs. BRCA2 mutation carriers [38/69 (55%) vs. 13/36 (36%), P = 0.1]. However, the comparison with BRCA-wild-type (WT) tumors revealed that this tendency was mainly attributed to the increased prevalence of hormone receptor (HR)-negative disease in the former group. When BC patients were stratified according to the tumor receptor status, the response rates in triple-negative patients were consistently higher than in HR+/HER2- patients across all analyzed subgroups [BRCA1: 35/59 (59%) vs. 3/10 (30%); BRCA2: 5/10 (50%) vs. 8/26 (31%); WT: 31/76 (41%) vs. 12/74 (16%); Mantel-Haenzsel P < 0.001]. Logistic regression analysis revealed that the odds ratio (OR) for achieving pCR was higher for receptor status (triple-negative vs. HR+: OR = 3.4, 95% CI 1.9-6.0, P < 0.001) than for BRCA status (any mutation vs. WT: OR = 2.1, 95% CI 1.2-3.6, P = 0.008). The addition of carboplatin did not improve pCR rates in BRCA1- or BRCA2-associated BCs, while there was a numerically higher efficacy of carboplatin-containing regimens in patients with WT triple-negative tumors [14/26 (54%) vs. 15/44 (34%), P = 0.13].

Conclusions: Hereditary ovarian carcinomas demonstrate better NACT outcomes in BRCA2 vs. BRCA1 mutation carriers. The opposite trend is observed in BC, which is likely to be attributed to a high frequency of triple-negative disease in BRCA1- but not BRCA2-associated BCs. Triple-negative receptor status rather than BRCA1/2 status is the strongest predictor of response to NACT in BC.

目的:BRCA1/2相关的乳腺癌和卵巢癌通常被视为一个单一的实体,假设BRCA1和BRCA2基因在临床意义上几乎相等。然而,BRCA1和BRCA2基因的功能不同;因此,比较BRCA1和BRCA2携带者的治疗结果是有必要的。方法:本研究的重点是连续接受新辅助化疗(NACT)治疗的患者,因为这些受试者是未经治疗的,可以立即评估病理和临床结果。结果:与brca1相关的癌症相比,brca2相关的高级别浆液性卵巢癌(HGSOCs)的病理完全缓解(pCR)率显著更高[8/15(53%)比7/48 (15%),P = 0.004]。相比之下,her2阴性乳腺癌(BC)患者BRCA1突变携带者的pCR率高于BRCA2突变携带者[38/69(55%)比13/36 (36%),P = 0.1]。然而,与brca野生型(WT)肿瘤的比较显示,这种趋势主要归因于前者组中激素受体(HR)阴性疾病的患病率增加。当根据肿瘤受体状态对BC患者进行分层时,在所有分析的亚组中,三阴性患者的反应率始终高于HR+/HER2-患者[BRCA1: 35/59 (59%) vs. 3/10 (30%);BRCA2: 5/10 (50%) vs. 8/26 (31%);WT: 31/76(41%)比12/74 (16%);Mantel-Haenzsel P < 0.001]。Logistic回归分析显示,受体状态(三阴性与HR+: OR = 3.4, 95% CI 1.9-6.0, P < 0.001)实现pCR的比值比(OR)高于BRCA状态(任何突变与WT: OR = 2.1, 95% CI 1.2-3.6, P = 0.008)。卡铂的加入并没有提高BRCA1-或brca2相关bc的pCR率,而在WT三阴性肿瘤患者中,含卡铂方案的疗效更高[14/26(54%)比15/44 (34%),P = 0.13]。结论:遗传性卵巢癌在BRCA2与BRCA1突变携带者中表现出更好的NACT结果。在BC中观察到相反的趋势,这可能归因于BRCA1-而不是brca2相关的BC中三阴性疾病的高频率。三阴性受体状态比BRCA1/2状态更能预测BC患者对NACT的反应。
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引用次数: 0
Osteosarcoma: current insights and advances. 骨肉瘤:当前的见解和进展。
Q3 Medicine Pub Date : 2025-06-15 eCollection Date: 2025-01-01 DOI: 10.37349/etat.2025.1002324
Guraustin S Brar, Aidan A Schmidt, Logan R Willams, Mark R Wakefield, Yujiang Fang

Osteosarcoma is the most prevalent primary malignant bone tumor affecting adolescents and young adults. Despite advancements in cancer therapies, its prognosis remains poor due to its aggressive nature and early propensity for metastasis-often present at the time of diagnosis. The etiology of osteosarcoma is multifactorial, involving genetic predispositions, environmental exposures, and familial syndromes. While treatment strategies are largely dictated by tumor stage, neoadjuvant chemotherapy followed by surgical resection remains the cornerstone of management. This review provides a comprehensive overview of osteosarcoma, including its historical context, subclassifications, clinical presentation, diagnostic approaches, and evolving treatment modalities. Recent therapeutic innovations-such as gene therapy, immunotherapy, radiation advances, and tyrosine kinase inhibitors-are discussed in detail, highlighting their mechanisms and clinical potential. By synthesizing current literature and identifying ongoing challenges, this review aims to inform clinicians and researchers of recent progress while highlighting critical gaps to guide future research and improve patient outcomes in osteosarcoma care.

骨肉瘤是影响青少年和年轻人的最常见的原发性恶性骨肿瘤。尽管癌症治疗取得了进步,但由于其侵袭性和早期转移倾向(通常在诊断时就存在),其预后仍然很差。骨肉瘤的病因是多因素的,包括遗传易感性、环境暴露和家族综合征。虽然治疗策略在很大程度上取决于肿瘤分期,但手术切除后的新辅助化疗仍然是治疗的基石。这篇综述提供了骨肉瘤的全面概述,包括其历史背景,亚分类,临床表现,诊断方法和不断发展的治疗方式。最近的治疗创新-如基因治疗,免疫治疗,放射治疗的进展,酪氨酸激酶抑制剂-详细讨论,强调其机制和临床潜力。通过综合目前的文献和确定正在面临的挑战,本综述旨在告知临床医生和研究人员最近的进展,同时强调关键的差距,以指导未来的研究和改善骨肉瘤治疗的患者结果。
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引用次数: 0
Mutational landscape of epidermoid carcinoma of the penis in a Brazilian cohort. 一个巴西队列中阴茎表皮样癌的突变景观。
Q3 Medicine Pub Date : 2025-06-06 eCollection Date: 2025-01-01 DOI: 10.37349/etat.2025.1002323
Renato Mendes Rossi De Lucca, Danielle Barbosa Brotto, Claudia Tarcila Gomes Sares, Kelly Gomes Duarte, Wilson Araujo Silva Junior, Philippe E Spiess, Shahrokh F Shariat, Natália Dalsenter Avilez, Caio de Oliveira, Leonardo O Reis, Rodolfo Borges Dos Reis

Aim: Penile cancer (PeCa) is a rare malignancy strongly associated with poor genital hygiene and is more prevalent in regions with low socioeconomic status. PeCa accounts for approximately 2% to 4% of all male cancers in Brazil, with higher incidence in the North and Northeast regions. Despite its aggressive nature, the molecular mechanisms underlying PeCa remain poorly understood. We performed whole-exome sequencing in a Brazilian cohort of patients with PeCa to identify potentially pathogenic genetic alterations associated with tumor development and progression.

Methods: Tumor tissue samples were obtained from patients diagnosed with PeCa. DNA was extracted and subjected to whole-exome sequencing. Human papillomavirus (HPV) genotyping was performed for subtypes 16 and 18. Control samples were collected from individuals without PeCa or other genital diseases.

Results: The cohort demonstrated considerable genetic heterogeneity. Multiple gene mutations were identified in tumor samples, many of which are involved in carcinogenesis-related biological pathways. Distinct molecular profiles were observed, suggesting diverse tumorigenic mechanisms. MUC16 (present in 11/12 patients, 91.7%) and PABPC1 (8/12 patients, 66.7%) were the most frequently mutated genes. HPV-16 was detected in a subset of cases; however, no consistent association with more aggressive disease was identified.

Conclusions: This study provides new insights into the genomic landscape of PeCa in a Brazilian population. The findings highlight the presence of heterogeneous and potentially pathogenic mutations, reinforcing the need for further molecular characterization and exploration of novel therapeutic targets in PeCa.

目的:阴茎癌(PeCa)是一种罕见的恶性肿瘤,与生殖卫生不良密切相关,在社会经济地位较低的地区更为普遍。PeCa约占巴西所有男性癌症的2%至4%,北部和东北地区的发病率更高。尽管其具有侵袭性,但PeCa的分子机制仍然知之甚少。我们在巴西PeCa患者队列中进行了全外显子组测序,以确定与肿瘤发生和进展相关的潜在致病性遗传改变。方法:从确诊为PeCa的患者身上取肿瘤组织标本。提取DNA并进行全外显子组测序。人乳头瘤病毒(HPV) 16和18亚型进行基因分型。对照样本采集自无PeCa或其他生殖器疾病的个体。结果:该队列显示出相当大的遗传异质性。在肿瘤样本中发现了多个基因突变,其中许多与致癌相关的生物学途径有关。观察到不同的分子谱,提示不同的致瘤机制。MUC16(11/12例,91.7%)和PABPC1(8/12例,66.7%)是最常见的突变基因。在一小部分病例中检测到HPV-16;然而,没有发现与更具侵袭性疾病的一致关联。结论:这项研究为巴西人群中PeCa的基因组景观提供了新的见解。这些发现强调了异质和潜在致病性突变的存在,加强了进一步分子表征和探索PeCa新治疗靶点的必要性。
{"title":"Mutational landscape of epidermoid carcinoma of the penis in a Brazilian cohort.","authors":"Renato Mendes Rossi De Lucca, Danielle Barbosa Brotto, Claudia Tarcila Gomes Sares, Kelly Gomes Duarte, Wilson Araujo Silva Junior, Philippe E Spiess, Shahrokh F Shariat, Natália Dalsenter Avilez, Caio de Oliveira, Leonardo O Reis, Rodolfo Borges Dos Reis","doi":"10.37349/etat.2025.1002323","DOIUrl":"10.37349/etat.2025.1002323","url":null,"abstract":"<p><strong>Aim: </strong>Penile cancer (PeCa) is a rare malignancy strongly associated with poor genital hygiene and is more prevalent in regions with low socioeconomic status. PeCa accounts for approximately 2% to 4% of all male cancers in Brazil, with higher incidence in the North and Northeast regions. Despite its aggressive nature, the molecular mechanisms underlying PeCa remain poorly understood. We performed whole-exome sequencing in a Brazilian cohort of patients with PeCa to identify potentially pathogenic genetic alterations associated with tumor development and progression.</p><p><strong>Methods: </strong>Tumor tissue samples were obtained from patients diagnosed with PeCa. DNA was extracted and subjected to whole-exome sequencing. Human papillomavirus (HPV) genotyping was performed for subtypes 16 and 18. Control samples were collected from individuals without PeCa or other genital diseases.</p><p><strong>Results: </strong>The cohort demonstrated considerable genetic heterogeneity. Multiple gene mutations were identified in tumor samples, many of which are involved in carcinogenesis-related biological pathways. Distinct molecular profiles were observed, suggesting diverse tumorigenic mechanisms. <i>MUC16</i> (present in 11/12 patients, 91.7%) and <i>PABPC1</i> (8/12 patients, 66.7%) were the most frequently mutated genes. HPV-16 was detected in a subset of cases; however, no consistent association with more aggressive disease was identified.</p><p><strong>Conclusions: </strong>This study provides new insights into the genomic landscape of PeCa in a Brazilian population. The findings highlight the presence of heterogeneous and potentially pathogenic mutations, reinforcing the need for further molecular characterization and exploration of novel therapeutic targets in PeCa.</p>","PeriodicalId":73002,"journal":{"name":"Exploration of targeted anti-tumor therapy","volume":"6 ","pages":"1002323"},"PeriodicalIF":0.0,"publicationDate":"2025-06-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12142355/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144251077","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Role of exosomes in transforming growth factor-β-mediated cancer cell plasticity and drug resistance. 外泌体在转化生长因子-β介导的癌细胞可塑性和耐药性中的作用。
Q3 Medicine Pub Date : 2025-06-05 eCollection Date: 2025-01-01 DOI: 10.37349/etat.2025.1002322
Tatiana Ruksha, Nadezhda Palkina

Transforming growth factor-β (TGF-β) is a multifunctional molecule with a dual role in carcinogenesis. Recent studies have demonstrated its various effects on cancer-related processes. However, the identification of TGF-β and TGF-β signaling pathway regulators in extracellular vesicles (EVs) appears promising for targeting them to control cancer progression associated with drug resistance. Exosomal TGF-β has been shown to be implicated in cancer cell phenotypic plasticity, a dynamic feature of cancer cells, and an evasive process hampering treatment efficacy. Additionally, EVs can influence the metastatic cascade through mechanisms, including their effects on the immune system and their binding to extracellular matrix (ECM) proteins. These processes collaborate to provide a supportive microenvironment for the development and growth of metastatic tumors. A deeper understanding of the mechanisms by which EVs facilitate TGF-β-mediated intercellular communication may have practical implications for better controlling oncological disorders and providing new methods for cancer diagnostics and treatment, including approaches targeting EVs.

转化生长因子-β (TGF-β)是一种在致癌过程中具有双重作用的多功能分子。最近的研究已经证明了它对癌症相关过程的各种影响。然而,细胞外囊泡(EVs)中TGF-β和TGF-β信号通路调节因子的鉴定似乎有望靶向它们来控制与耐药相关的癌症进展。外泌体TGF-β已被证明与癌细胞表型可塑性有关,这是癌细胞的动态特征,也是一个阻碍治疗效果的回避过程。此外,ev可以通过其对免疫系统的影响以及与细胞外基质(ECM)蛋白的结合等机制影响转移级联。这些过程共同为转移性肿瘤的发展和生长提供了一个支持性的微环境。更深入地了解ev促进TGF-β介导的细胞间通讯的机制,可能对更好地控制肿瘤疾病和为癌症诊断和治疗提供新的方法具有实际意义,包括针对ev的方法。
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引用次数: 0
Circulating tumor cells: overcoming challenges of detecting a needle in a haystack. 循环肿瘤细胞:克服大海捞针的挑战。
Q3 Medicine Pub Date : 2025-05-29 eCollection Date: 2025-01-01 DOI: 10.37349/etat.2025.1002321
Zhuldyz Myrkhiyeva, Kuanysh Seitkamal, Zhannat Ashikbayeva, Assiya Taizhanova, Daniele Tosi, Aliya Bekmurzayeva

Circulating tumor cells (CTCs) are cancer cells that are detached from the primary and metastatic tumor site and invade the bloodstream. Most importantly, CTCs are the key players in the development of metastasis. As one of the main components of liquid biopsy, they may significantly contribute to improvements in early cancer diagnosis, monitoring response to therapy, and predicting recurrence of the disease. Although identifying and analyzing CTCs offers the potential for a real-time liquid biopsy, their detection is associated with a number of challenges, which mainly stem from three sources: complexity of the CTCs, complexity of the media (blood), and performance of the detection assays. Particularly, low concentration of the CTCs and the presence of a vast population of hematopoietic cells in the blood make their detection technically complex. The heterogeneity of the target cells and not enough sensitivity of the measuring platforms are also among major technical challenges in CTC detection. Therefore, this review aims to give an update on various methods developed for CTC isolation, including chip-based assays and biosensors. The work will elucidate various challenges associated with the isolation and detection of CTCs and showcase the studies that aimed to tackle them. A number of available commercial platforms for CTC detection and hurdles associated with their widespread applications in clinical settings will also be discussed.

循环肿瘤细胞(CTCs)是从原发和转移性肿瘤部位分离出来并侵入血液的癌细胞。最重要的是,ctc是转移发展的关键参与者。作为液体活检的主要组成部分之一,它们可能对改善早期癌症诊断、监测治疗反应和预测疾病复发有重要贡献。尽管识别和分析ctc为实时液体活检提供了可能,但其检测存在许多挑战,主要来自三个方面:ctc的复杂性、介质(血液)的复杂性以及检测分析的性能。特别是,低浓度的ctc和血液中大量造血细胞的存在使得它们的检测在技术上很复杂。靶细胞的非均匀性和测量平台的灵敏度不足也是CTC检测的主要技术挑战之一。因此,本综述旨在对CTC分离的各种方法进行更新,包括基于芯片的检测和生物传感器。这项工作将阐明与CTCs的分离和检测相关的各种挑战,并展示旨在解决这些挑战的研究。还将讨论用于CTC检测的一些可用的商业平台及其在临床环境中广泛应用的障碍。
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引用次数: 0
A viral circular RNA in Kaposi's sarcoma-associated herpesvirus modulates viral and host gene expression during latent and lytic replication. 卡波西氏肉瘤相关疱疹病毒中的病毒环状RNA在潜伏和裂解复制期间调节病毒和宿主基因的表达。
Q3 Medicine Pub Date : 2025-05-29 eCollection Date: 2025-01-01 DOI: 10.37349/etat.2025.1002320
Soleil Torres, Vaibhav Jain, Daniel Stribling, Lauren A Gay, Muhammed Naeem, Melody Baddoo, Erik K Flemington, Scott A Tibbetts, Rolf Renne

Aim: Circular RNA (circRNA) is a class of noncoding, single-stranded RNA generated by backsplicing, a process where the 5' and 3' ends of an RNA are covalently joined. Virally encoded circRNAs have been identified in several members of Gammaherpesvirinae, including Kaposi's sarcoma-associated herpesvirus (KSHV). In KSHV, the viral interferon regulatory factor 4 (vIRF4) region produces two isoforms of circRNA (circ-vIRF4) that are detectable during latency and reactivation. Given the growing literature implicating circRNA in human diseases, a role may exist for circ-vIRF4 in the development of KSHV malignancies. Therefore, the aim of this study is to characterize the function of vIRF4 circRNAs.

Methods: A KSHV mutant (Δcirc-vIRF4) was generated in the BAC16 bacmid and transfected into 293T and iSLK cells. Expression of circRNA after mutagenesis was assessed by qualitative and quantitative PCR. Host and viral gene expression in iSLK cells during both viral latency and reactivation were also assessed by RNA-seq.

Results: RT-PCR of Δcirc-vIRF4-infected iSLK cells demonstrated no expression of wild-type (WT) isoforms, but PCR cloning showed that alternative backsplice sites were used to express novel vIRF4 circRNAs, where the most prominent isoform was a 1,020 nt isoform. RNA-seq analyses comparing WT- and Δcirc-vIRF4-infected iSLK cells demonstrated significant differential expression of both host and viral genes during both phases of the viral life cycle. Gene ontology analyses returned terms related to cell adhesion, proliferation, and migration for both datasets, as well as kinase signaling and apoptosis for the lytic dataset.

Conclusions: These results show that KSHV can switch to an alternative backsplice site for vIRF4 circRNA production in the absence of a canonical splice site and that circ-vIRF4 contributes to the regulation of both host and viral gene expression through an unknown mechanism.

目的:环状RNA (circRNA)是一类由反剪接产生的非编码单链RNA,这是一个RNA的5‘和3’端共价连接的过程。病毒编码的环状rna已经在几种伽玛疱疹病毒科成员中被鉴定出来,包括卡波西肉瘤相关疱疹病毒(KSHV)。在KSHV中,病毒干扰素调节因子4 (vIRF4)区域产生circRNA (circ-vIRF4)的两种亚型,在潜伏期和再激活期间可检测到。鉴于越来越多的文献表明circRNA与人类疾病有关,circ-vIRF4可能在KSHV恶性肿瘤的发展中发挥作用。因此,本研究的目的是表征vIRF4 circrna的功能。方法:在BAC16 bacmid中产生KSHV突变体(Δcirc-vIRF4),转染293T和iSLK细胞。通过定性和定量PCR检测突变后circRNA的表达。在病毒潜伏期和再激活期间,还通过RNA-seq评估了iSLK细胞中宿主和病毒基因的表达。结果:Δcirc-vIRF4-infected iSLK细胞的RT-PCR未显示野生型(WT)异构体的表达,但PCR克隆显示使用了其他后剪接位点来表达新的vIRF4环状rna,其中最突出的异构体是1,020 nt异构体。比较WT-和Δcirc-vIRF4-infected iSLK细胞的RNA-seq分析显示,在病毒生命周期的两个阶段,宿主和病毒基因的表达都存在显著差异。对于两个数据集,基因本体分析返回与细胞粘附、增殖和迁移相关的术语,对于分析数据集,返回与激酶信号传导和细胞凋亡相关的术语。结论:这些结果表明,在缺乏标准剪接位点的情况下,KSHV可以切换到vIRF4 circRNA产生的另一个反向剪接位点,circ-vIRF4通过未知的机制调节宿主和病毒的基因表达。
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引用次数: 0
The DNA methylation landscape of musculoskeletal sarcomas. 肌肉骨骼肉瘤的DNA甲基化景观。
Q3 Medicine Pub Date : 2025-05-26 eCollection Date: 2025-01-01 DOI: 10.37349/etat.2025.1002319
Mariana Chantre-Justino, Walter Meohas

Musculoskeletal sarcomas represent heterogeneous and rare malignant bone and soft tissue tumors, affecting children and adults. Patients exhibiting poor clinical outcomes are often described, being associated with non-response to chemotherapy, amputation needs, or metastatic disease. Potential biomarkers contributing to diagnosis, prognosis, and treatment response could improve this scenario. Despite this, little is known about the genomic aspects of musculoskeletal sarcomas. DNA methylation is the most studied epigenetic mechanism, where changes in methylation profiling are characteristic hallmarks of cancer. Cancer-related methylome profiling has been investigated both in tumor biopsies (genomic DNA) and liquid biopsies (cell-free DNA). Epigenetic therapies by using DNA-demethylating drugs are promising strategies for cancer treatment. This review will discuss translational studies describing how DNA methylation landscape of musculoskeletal sarcomas can be a powerful molecular tool to improve diagnostic accuracy, predict prognosis, and treatment response. Additionally, this review will describe the promising role of epigenetics-targeted drugs as well as the ongoing clinical trials for sarcomas, highlighting the challenges and future directions.

肌肉骨骼肉瘤是一种罕见的异质骨和软组织恶性肿瘤,影响儿童和成人。表现出不良临床结果的患者通常被描述为与化疗无反应、截肢需要或转移性疾病有关。有助于诊断、预后和治疗反应的潜在生物标志物可以改善这种情况。尽管如此,人们对肌肉骨骼肉瘤的基因组方面知之甚少。DNA甲基化是研究最多的表观遗传机制,其中甲基化谱的变化是癌症的特征标志。在肿瘤活检(基因组DNA)和液体活检(无细胞DNA)中研究了癌症相关的甲基组谱。利用dna去甲基化药物进行表观遗传治疗是一种很有前景的癌症治疗策略。这篇综述将讨论描述肌肉骨骼肉瘤的DNA甲基化景观如何成为提高诊断准确性、预测预后和治疗反应的强大分子工具的转化研究。此外,本文将描述表观遗传学靶向药物的前景作用以及正在进行的肉瘤临床试验,强调挑战和未来的方向。
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引用次数: 0
Prognostic impact of biomarkers in PMBCL: rationale for early integration of immune checkpoint inhibitors. PMBCL中生物标志物的预后影响:早期整合免疫检查点抑制剂的理由
Q3 Medicine Pub Date : 2025-05-20 eCollection Date: 2025-01-01 DOI: 10.37349/etat.2025.1002318
Yana K Mangasarova, Runiza R Abdurashidova, Natalya V Risinskaya, Bella V Biderman, Tatiana V Abramova, Vadim L Surin, Irina A Shupletsova, Tatiana N Obukhova, Rasul I Iusupov, Yulia A Chabaeva, Aminat U Magomedova, Lena E Nikulina, Sergei M Kulikov, Eugene E Zvonkov, Alla M Kovrigina, Andrey B Sudarikov

Aim: This research aims to guide future strategies for personalized treatment of primary mediastinal large B-cell lymphoma (PMBCL), particularly to identify high-risk patients who may benefit from incorporating immune checkpoint inhibitors (ICIs) in the first-line setting.

Methods: A retrospective, single-center study included 254 newly diagnosed PMBCL patients treated with rituximab, dose-adjusted etoposide, prednisone, vincristine, cyclophosphamide, doxorubicin (R-DA-EPOCH), rituximab, modified protocol NHL-BFM-90 (RmNHL-BFM-90), or R-DA-EPOCH combined with nivolumab. Clinical parameters, immunohistochemical markers [programmed death ligand-1 (PD-L1), programmed death-1 (PD-1), cytotoxic T-lymphocyte-associated protein 4 (CTLA-4), human leucocyte antigen (HLA)-DR, Ki-67, multiple myeloma oncogene 1 (MUM1)], molecular markers (mutations in tumor protein p53 (TP53), CD58, beta-2-microglobulin (B2M), and exportin 1 (XPO1) genes; short tandem repeats at 6p21.3 [major histocompatibility complex (MHC) class I/II], 9p24.1 (PD-L1/PD-L2), 16p13.13 [class II, MHC, transactivator gene (CIITA)]), and cytogenetic profiles [myelocytomatosis oncogene (MYC)/8q24, B-cell lymphoma 2 (BCL2)/18q21, BCL6/3q27, del17p13, and karyotype abnormalities] were analyzed.

Results: The addition of nivolumab to R-DA-EPOCH as a first-line regimen significantly improved event-free survival (EFS; P = 0.018). This study identified that adverse prognostic factors for PMBCL include allelic imbalance at specific loci 6p21.3 (MHC class I/II), 9p24.1 (PD-L1/PD-L2), and 16p13.13 (CIITA). Incorporating nivolumab into the R-DA-EPOCH regimen as a first-line therapy has shown potential in reducing adverse prognostic factors.

Conclusions: These findings suggest that high-risk patients may benefit significantly from the early incorporation of ICIs into their treatment plans.

目的:本研究旨在指导未来原发性纵隔大b细胞淋巴瘤(PMBCL)的个性化治疗策略,特别是识别可能受益于一线免疫检查点抑制剂(ICIs)的高危患者。方法:回顾性单中心研究纳入254例新诊断的PMBCL患者,接受利妥昔单抗、剂量调整依托泊苷、泼尼松、长春新碱、环磷酰胺、阿霉素(R-DA-EPOCH)、利妥昔单抗、修改方案NHL-BFM-90 (RmNHL-BFM-90)或R-DA-EPOCH联合纳鲁单抗治疗。临床参数、免疫组织化学标记物[程序性死亡配体-1 (PD-L1)、程序性死亡-1 (PD-1)、细胞毒性t淋巴细胞相关蛋白4 (CTLA-4)、人白细胞抗原(HLA)-DR、Ki-67、多发性骨髓瘤癌基因1 (MUM1)]、分子标记物(肿瘤蛋白p53 (TP53)、CD58、β -2微球蛋白(B2M)、输出蛋白1 (XPO1)基因突变;分析6p21.3[主要组织相容性复合体(MHC) I/II类]、9p24.1 (PD-L1/PD-L2)、16p13.13 [II类,MHC,反激活基因(CIITA)]和细胞遗传学谱[髓细胞瘤癌基因(MYC)/8q24、b细胞淋巴瘤2 (BCL2)/18q21、BCL6/3q27、del17p13和核型异常]的短串联重复序列。结果:nivolumab作为一线方案加入R-DA-EPOCH显著提高无事件生存期(EFS;P = 0.018)。本研究发现PMBCL的不良预后因素包括特定位点6p21.3 (MHC I/II类)、9p24.1 (PD-L1/PD-L2)和16p13.13 (CIITA)的等位基因失衡。将纳武单抗纳入R-DA-EPOCH方案作为一线治疗已显示出减少不良预后因素的潜力。结论:这些发现表明高风险患者可能从早期将ICIs纳入其治疗计划中获益显著。
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Exploration of targeted anti-tumor therapy
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