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Changing the landscape of non-small cell lung cancer disparities. 改变非小细胞肺癌差异的格局。
Pub Date : 2021-01-01 DOI: 10.46439/cancerbiology.2.020
Joab O Odera, Muthana Al Abo, Steven R Patierno, Jeffrey M Clarke, Jennifer A Freedman

In the United States, lung and bronchus cancers are the second most common types of cancer and are responsible for the largest number of deaths from cancer, with African Americans suffering disproportionately from lung and bronchus cancers. This disparity likely results from a complex interplay among social, psycho-social, lifestyle, environmental, health system, and biological determinants of health. Toward improving outcomes for lung cancer patients of all races and ethnicities and mitigating lung cancer disparities, in this commentary, we bring forward biological factors that contribute to lung cancer disparities, efforts to identify, functionally characterize, and modulate novel ancestry-related RNA splicing-related targets in lung cancer for precision intervention, and translational and clinical research needs to improve outcomes for lung cancer patients of all races and ethnicities and mitigate lung cancer disparities.

在美国,肺癌和支气管癌是第二常见的癌症类型,也是癌症死亡人数最多的原因,其中非裔美国人患肺癌和支气管癌的比例很高。这种差异可能是社会、心理社会、生活方式、环境、卫生系统和健康的生物决定因素之间复杂相互作用的结果。为了改善所有种族和民族肺癌患者的预后,减轻肺癌差异,在这篇评论中,我们提出了导致肺癌差异的生物学因素,努力识别、功能表征和调节肺癌中新的与祖先相关的RNA剪接相关靶点,以进行精确干预。转化和临床研究需要改善所有种族和民族肺癌患者的预后,并减轻肺癌的差异。
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引用次数: 0
Chromatin dynamics: Nucleosome occupancy and sensitivity as determinants of gene expression and cell fate. 染色质动力学:核小体的占有和敏感性是基因表达和细胞命运的决定因素。
Pub Date : 2021-01-01 DOI: 10.46439/cancerbiology.2.024
Jane Benoit, Mahdi Khadem Sheikhbahaei, Jonathan Dennis

The nucleosome, consisting of ~150bp of DNA wrapped around a core histone octamer, is a regulator of nuclear events that contributes to gene expression and cell fate. Nucleosome organization at promoters and their associated remodeling events are important regulators of access to the genome. Occupancy alone, however, is not the only nucleosomal characteristic that plays a role in genome regulation. Nucleosomes at the transcription start sites (TSSs) of genes show differential sensitivity to micrococcal nuclease (MNase) and this differential sensitivity is linked to transcription and regulatory factor binding events. Recently, lymphoblastoid cells treated with heat-killed Salmonella typhimurium were shown to exhibit increased MNase sensitivity specifically at genes implicated in immune responses. Increased sensitivity at the -1-nucleosome permitted transcription factor and RNA Pol II binding events. This system illustrates how cytoplasmic signals induce altered chromatin states to produce a specific cellular response to a stimulus. Innate immune activation is a longstanding model for inducible promoters, transcriptional activation, and differential nucleosomal sensitivity in response to immune activation and offers a model that may be largely applicable to other specific cellular responses including viral infection and cancer. Previous work has shown that early transformation events are associated with prolonged nucleosome occupancy changes that are not observed later in cancer progression. Herein, we propose a model in which we suggest that detailed studies of nucleosomal occupancy and sensitivity in response to specific stimuli will provide insight into the regulation of nuclear events in cancer and other biological processes.

核小体由约150bp的DNA组成,包裹在核心组蛋白八聚体周围,是核事件的调节剂,有助于基因表达和细胞命运。启动子上的核小体组织及其相关的重塑事件是进入基因组的重要调节因子。然而,占用本身并不是唯一在基因组调控中起作用的核小体特征。基因转录起始位点(tss)的核小体对微球菌核酸酶(MNase)表现出不同的敏感性,这种差异敏感性与转录和调节因子结合事件有关。最近,用热杀灭鼠伤寒沙门氏菌处理的淋巴母细胞样细胞显示出增加的mase敏感性,特别是在涉及免疫反应的基因上。对-1核小体允许的转录因子和RNA Pol II结合事件的敏感性增加。该系统说明了细胞质信号如何诱导染色质状态改变,从而产生对刺激的特定细胞反应。先天免疫激活是免疫激活诱导启动子、转录激活和差异核小体敏感性的长期模型,并提供了一个可能在很大程度上适用于其他特定细胞反应的模型,包括病毒感染和癌症。先前的研究表明,早期转化事件与延长的核小体占用变化有关,而这种变化在后来的癌症进展中没有观察到。在此,我们提出了一个模型,在该模型中,我们建议对特定刺激反应的核小体占用和敏感性的详细研究将提供对癌症和其他生物过程中核事件调节的见解。
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引用次数: 0
Breaking malignant nuclei as a non-mitotic mechanism of taxol/paclitaxel. 紫杉醇/紫杉醇破坏恶性细胞核的非有丝分裂机制。
Pub Date : 2021-01-01 DOI: 10.46439/cancerbiology.2.031
Elizabeth R Smith, Xiang-Xi Xu

Discovered in a large-scale screening of natural plant chemicals, Taxol/paclitaxel and the taxane family of compounds are surprisingly successful anti-cancer drugs, used in treatment of the majority of solid tumors, and especially suitable for metastatic and recurrent cancer. Paclitaxel is often used in combination with platinum agents and is administrated in a dose dense regimen to treat recurrent cancer. The enthusiasm and clinical development were prompted by the discovery that Taxol binds beta-tubulins specifically found within microtubules and stabilizes the filaments, and consequently inhibits mitosis. However, questions on how paclitaxel suppresses cancer persist, as other specific mitotic inhibitors are impressive in pre-clinical studies but fail to achieve significant clinical activity. Thus, additional mechanisms, such as promoting mitotic catastrophe and impacting non-mitotic targets, have been proposed and studied. A good understanding of how paclitaxel, and additional new microtubule stabilizing agents, kill cancer cells will advance the clinical application of these common chemotherapeutic agents. A recent study provides a potential non-mitotic mechanism of paclitaxel action, that paclitaxel-induced rigid microtubules act to break malleable cancer nuclei into multiple micronuclei. Previous studies have established that cancer cells have a less sturdy, more pliable nuclear envelope due to the loss or reduction of lamin A/C proteins. Such changes in nuclear structure provide a selectivity for paclitaxel to break the nuclear membrane and kill cancer cells over non-neoplastic cells that have a sturdier nuclear envelope. The formation of multiple micronuclei appears to be an important aspect of paclitaxel in the killing of cancer cells, either by a mitotic or non-mitotic mechanism. Additionally, by binding to microtubule, paclitaxel is readily sequestered and concentrated within cells. This unique pharmacokinetic property allows the impact of paclitaxel on cells to persist for several days, even though the circulating drug level is much reduced following drug administration/infusion. The retention of paclitaxel within cells likely is another factor contributing to the efficacy of the drugs. Overall, the new understanding of Taxol/paclitaxel killing mechanism-rigid microtubule-induced multiple micronucleation-will likely provide new strategies to overcome drug resistance and for rational drug combination.

紫杉醇/紫杉醇和紫杉烷家族化合物是在天然植物化学物质的大规模筛选中发现的,是令人惊讶的成功抗癌药物,用于治疗大多数实体瘤,尤其适用于转移性和复发性癌症。紫杉醇通常与铂类药物联合使用,并以剂量密集方案给药,以治疗复发性癌症。紫杉醇与微管中特异性的β-微管蛋白结合并稳定细丝,从而抑制有丝分裂,这一发现促进了人们的热情和临床发展。然而,关于紫杉醇如何抑制癌症的问题仍然存在,因为其他特异性有丝分裂抑制剂在临床前研究中令人印象深刻,但未能达到显著的临床活性。因此,已经提出并研究了其他机制,如促进有丝分裂突变和影响非有丝分裂靶点。对紫杉醇和其他新型微管稳定剂如何杀死癌症细胞的良好理解将推动这些常见化疗药物的临床应用。最近的一项研究提供了紫杉醇作用的一种潜在的非有丝分裂机制,即紫杉醇诱导的刚性微管起到将可塑性癌症细胞核分裂成多个微核的作用。先前的研究已经证实,由于层粘连蛋白a/C蛋白的缺失或减少,癌症细胞的核膜不那么坚固,更柔韧。这种核结构的变化为紫杉醇提供了一种选择性,使其能够破坏核膜并杀死癌症细胞,而不是具有更坚固核膜的非肿瘤细胞。多个微核的形成似乎是紫杉醇通过有丝分裂或无丝分裂机制杀死癌症细胞的一个重要方面。此外,通过与微管结合,紫杉醇很容易被隔离并浓缩在细胞内。这种独特的药代动力学特性允许紫杉醇对细胞的影响持续数天,即使给药/输注后循环药物水平大大降低。紫杉醇在细胞内的保留可能是影响药物疗效的另一个因素。总的来说,对紫杉醇/紫杉醇杀伤机制的新理解——刚性微管诱导的多个微核——可能会为克服耐药性和合理的药物组合提供新的策略。
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引用次数: 8
Implications of the USP10-HDAC6 axis in lung cancer - A path to precision medicine. USP10-HDAC6 轴在肺癌中的影响--通往精准医疗之路。
Pub Date : 2021-01-01 Epub Date: 2016-04-22 DOI: 10.46439/cancerbiology.2.015
Xiaohong Mary Zhang, Navnath Gavande, Prahlad Parajuli, Gerold Bepler

Lung cancer is the leading cause of cancer death among both men and women in the United States. Because lung cancer is genetically heterogeneous, tailored therapy alone or in combination with chemotherapy would increase patient overall survival as compared with the one-size-fits-all chemotherapy. TP53-mutant lung cancer accounts for more than half of all lung cancer cases and is oftentimes more aggressive and resistant to chemotherapy. Directly targeting mutant p53 has not yet been successful, so identification of novel therapy targets and biomarkers in the TP53-mutant lung cancer is urgently needed to increase the overall survival in this subgroup. Deubiquitinating enzymes (DUBs) regulate a vast majority of proteins (DUBs' substrates) via removal of ubiquitin moieties or ubiquitin chains from these proteins, thereby altering the stability and/or functions of these substrates. In this review, we will focus on a DUB, referred to as ubiquitin-specific peptidase 10 (USP10) whose substrates include both oncogenic proteins and tumor suppressors. Therefore, targeting USP10 in cancer is highly context-dependent. Here, we will discuss USP10's functions in cancer by examining its various known substrates. In particular, we will elaborate our recent findings in the oncogenic role of USP10 in the TP53-mutant subgroup of lung cancer, focusing on USP10's function in the DNA damage response (DDR) via histone deacetylase 6 (HDAC6). Overall, these findings support the notion that targeting USP10 in the TP53-mutant subgroup of NSCLC would sensitize patients to cisplatin-based chemotherapy. Generating potent and specific clinically relevant USP10 inhibitors would benefit the TP53-mutant subgroup of NSCLC patients.

肺癌是美国男性和女性癌症死亡的主要原因。由于肺癌在基因上具有异质性,与 "一刀切 "的化疗相比,单独或结合化疗的定制疗法将提高患者的总生存率。TP53突变型肺癌占所有肺癌病例的一半以上,通常更具侵袭性,对化疗更具抗药性。直接针对突变 p53 的治疗尚未取得成功,因此急需鉴定 TP53 突变肺癌的新型治疗靶点和生物标志物,以提高该亚群的总体生存率。去泛素化酶(DUBs)通过去除蛋白质中的泛素分子或泛素链来调节绝大多数蛋白质(DUBs的底物),从而改变这些底物的稳定性和/或功能。在本综述中,我们将重点讨论一种 DUB,即泛素特异性肽酶 10(USP10),它的底物既包括致癌蛋白,也包括肿瘤抑制因子。因此,在癌症中靶向 USP10 是高度依赖于环境的。在这里,我们将通过研究 USP10 的各种已知底物来讨论 USP10 在癌症中的功能。特别是,我们将阐述 USP10 在肺癌 TP53 突变亚组中的致癌作用的最新发现,重点是 USP10 通过组蛋白去乙酰化酶 6 (HDAC6) 在 DNA 损伤反应 (DDR) 中的功能。总之,这些研究结果支持这样一种观点,即在 TP53 突变的 NSCLC 亚群中靶向 USP10 将使患者对顺铂化疗敏感。开发强效、特异的临床相关 USP10 抑制剂将使 TP53 突变亚组 NSCLC 患者受益。
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引用次数: 0
Can electronic-cigarette vaping cause cancer? 吸电子烟会致癌吗?
Pub Date : 2021-01-01 DOI: 10.46439/cancerbiology.2.027
Moon-Shong Tang, Yen-Len Tang
The relative safety of E-cigarette (E-cig) has been an emerging topic in the public domain as well as the medical and scientific communities as vaping associated health problems arose. While there were significant amounts of intelligent discussions and opinions on the benefits and deleterious effects of E-cig vaping, there is a lack of solid evidence of the fundamental biochemical and biological effects of E-cig aerosol and nicotine.
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引用次数: 0
COVID-19 in patients with and without cancer: Examining differences in patient characteristics and outcomes. COVID-19在癌症患者和非癌症患者中的应用:研究患者特征和预后的差异。
Pub Date : 2021-01-01 Epub Date: 2021-03-18 DOI: 10.46439/cancerbiology.2.019
Nihal E Mohamed, Emma Kt Benn, Varuna Astha, Qainat N Shah, Yasmine Gharib, Holden E Kata, Heather Honore-Goltz, Zachary Dovey, Natasha Kyprianou, Ashutosh K Tewari

This study examines differences between patients with and without cancer in patient demographic and clinical characteristics and COVID-19 mortality and discusses the implications of these differences in relation to existing cancer disparities and COVID-19 vulnerabilities. Data was collected as a part of a retrospective study on a cohort of COVID-19 positive patients across Mount Sinai Health System from March 28, 2020 to April 26, 2020. Descriptive, comparative, and regression analyses were applied to examine differences between patients with and without cancer in demographic and clinical characteristics and COVID-19 mortality and whether cancer status predicts COVID-19 mortality controlling for these covariates using SAS 9.4. Results showed that, of 4641 patients who tested positive for COVID-19, 5.1% (N=236) had cancer. The median age of the total sample was 58 years (Q1-Q3: 41-71); 55.3% were male, 19.2% were current/former smokers, 6.1% were obese. The most commonly reported comorbidities were hypertension (22.6%) and diabetes (16.0%). Overall, the COVID-19 mortality rate was 8.3%. Examining differences between COVID-19 patients with and without cancer revealed significant differences (p<0.05) in COVID-19 mortality, hospitalization rates, age, gender, race, smoking status, obesity, and comorbidity indicators (e.g., diabetes) with cancer patients more likely to be older, male, black, obese, smokers, and with existing comorbidities. Controlling for these clinical, demographic, and behavioral characteristics, results of logistic regression analyses showed significant effects of older age and male gender on COVID-19 mortality (p<0.05). While cancer patients with COVID-19 were more likely to experience worse COVID-19 outcomes, these associations might be related to common cancer and COVID-19 vulnerability factors such as older age and gender. The coexistence of these vulnerability age and gender factors in both cancer and COVID-19 populations emphasizes the need for better understanding of their implications for cancer and COVID-19 disparities, both diseases prevention efforts, policies, and clinical management.

本研究探讨了癌症患者和非癌症患者在人口统计学和临床特征以及 COVID-19 死亡率方面的差异,并讨论了这些差异对现有癌症差异和 COVID-19 易感性的影响。作为回顾性研究的一部分,我们收集了 2020 年 3 月 28 日至 2020 年 4 月 26 日期间西奈山卫生系统 COVID-19 阳性患者队列的数据。研究人员使用 SAS 9.4 进行了描述性分析、比较分析和回归分析,以检验癌症患者和非癌症患者在人口统计学特征、临床特征和 COVID-19 死亡率方面的差异,以及在控制这些协变量的情况下,癌症状态是否能预测 COVID-19 死亡率。结果显示,在 4641 名 COVID-19 检测呈阳性的患者中,5.1%(N=236)患有癌症。总样本的中位年龄为 58 岁(Q1-Q3:41-71);55.3% 为男性,19.2% 目前/曾经吸烟,6.1% 肥胖。最常见的合并症是高血压(22.6%)和糖尿病(16.0%)。总体而言,COVID-19 的死亡率为 8.3%。通过研究 COVID-19 癌症患者与非癌症患者之间的差异,发现两者之间存在显著差异(p
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引用次数: 0
Role of H3K9 demethylases in DNA double-strand break repair. H3K9去甲基酶在DNA双链断裂修复中的作用。
Pub Date : 2020-01-01 DOI: 10.46439/cancerbiology.1.003
Hee-Young Jeon, Arif Hussain, Jianfei Qi

H3K9 demethylases can remove the repressive H3K9 methylation marks on histones to alter chromatin structure, gene transcription and epigenetic state of cells. By counteracting the function of H3K9 methyltransferases, H3K9 demethylases have been shown to play an important role in numerous biological processes, including diseases such as cancer. Recent evidence points to a key role for some H3K9 demethylases in the repair of DNA double-strand breaks (DSBs) via homologous recombination (HR) and/or non-homologous end joining (NHEJ) pathways. Mechanistically, H3K9 demethylases can upregulate the expression of DNA repair factors. They can also be recruited to the DNA damage sites and regulate the recruitment or function of DNA repair factors. Here, we will discuss the role and mechanisms of H3K9 demethylases in the regulation of DSB repair.

H3K9去甲基化酶可以去除组蛋白上的抑制H3K9甲基化标记,从而改变细胞的染色质结构、基因转录和表观遗传状态。通过抵消H3K9甲基转移酶的功能,H3K9去甲基化酶已被证明在许多生物过程中发挥重要作用,包括癌症等疾病。最近的证据表明,一些H3K9去甲基化酶通过同源重组(HR)和/或非同源末端连接(NHEJ)途径在DNA双链断裂(DSBs)修复中起关键作用。机制上,H3K9去甲基化酶可以上调DNA修复因子的表达。它们也可以被招募到DNA损伤位点,调节DNA修复因子的招募或功能。在这里,我们将讨论H3K9去甲基化酶在调节DSB修复中的作用和机制。
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引用次数: 6
期刊
Journal of cancer biology
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