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Sustainable development for new era of microorganism control. 可持续发展助力微生物治理新时代。
Pub Date : 2023-01-01 DOI: 10.4265/jmc.28.1_1
Satoshi Fukuzaki, Tetsuaki Tsuchido
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引用次数: 0
Evaluation of the effect of peptidoglycan-constituting components on photocatalytic bactericidal sterilization. 肽聚糖组成成分对光催化杀菌杀菌效果的评价。
Pub Date : 2023-01-01 DOI: 10.4265/jmc.28.3_117
Haruka Motomura, Tomonori Suzuki

Previous studies in our lab have shown that peptidoglycan (PG) enhances the photocatalytic bactericidal effect. Therefore, in this study, we focused on the PG-constituting components. The PG-constituting components were added to Mesoplasma florum with no cell wall, respectively, and their effects on photocatalytic sterilization were investigated. The PG-constituting components used were amino sugars, amino acids, L-Alanine-D-Glutamic Acid (L-Ala-D-Glu) dipeptide of diaminopimelic acid (DAP)-type crosslinking peptide, and Lysine (Lys)-type crosslinking peptide. We compared the survival rates of M. florum cells and PG-constituting components-added M. florum cells after 3 h of photocatalytic reaction. Consequently, the survival rates of the cells that were added N-acetylglucosamine (GlcNAc), DAP, and L-Ala- D-Glu dipeptide were significantly lower than those of only the cells. Furthermore, the amounts of hydrogen peroxide (H2O2) generated by the photocatalytic reaction under the presence of these components were determined. The results showed that DAP, L-Ala- D-Glu dipeptide, and PG of DAP-type significantly increased the amount of H2O2 produced. From the above results, it is suggested that the presence of DAP and L-Ala- D-Glu dipeptide in the photocatalytic reaction boosts the production of H2O2 and enhances the bactericidal effect and that GlcNAc might produce reactive oxygen species other than H2O2.

我们实验室先前的研究表明,肽聚糖(PG)可以增强光催化杀菌效果。因此,在本研究中,我们重点研究了PG的组成成分。将PG组分分别添加到无细胞壁的花中,研究了它们对光催化杀菌的影响。所使用的PG构成成分是氨基糖、氨基酸、二氨基二聚酸(DAP)型交联肽的L-丙氨酸-D-谷氨酸(L-Ala-D-Glu)二肽和赖氨酸(Lys)型交联肽类。我们比较了M.florum细胞和添加PG组成成分的M.florum细胞在光催化反应3小时后的存活率。因此,添加N-乙酰葡糖胺(GlcNAc)、DAP和L-Ala-D-Glu二肽的细胞的存活率显著低于仅添加细胞的存活速率。此外,测定了在这些组分存在下通过光催化反应产生的过氧化氢(H2O2)的量。结果表明,DAP型的DAP、L-Ala-D-Glu二肽和PG显著增加了H2O2的产生量。以上结果表明,DAP和L-Ala-D-Glu二肽在光催化反应中的存在促进了H2O2的产生,增强了杀菌效果,GlcNAc可能产生H2O2以外的活性氧。
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引用次数: 0
Possible solution of capturing viable Enterohemorrhagic Escherichia coli (EHEC) in clinical patient stool. 在临床患者粪便中捕获活肠出血性大肠杆菌(EHEC)的可能解决方案。
Pub Date : 2023-01-01 DOI: 10.4265/jmc.28.3_129
Hajime Teramura, Sachie Sanga, Kanako Kodama

For clinical diagnosis of enterohemorrhagic Escherichia coli (EHEC), it needs to capture viable EHEC cells from stool sample in the view of medical fee points. However, there is no comprehensive solution for the detection of viable EHEC cells since there are wide variety of serotype and susceptibility against potassium tellurite which is commonly used for selective agent in selective medium for EHEC. In these background, EHEC Clear-HT System (EHEC-CHT), a novel effective chromogenic medium system for screening comprehensive viable EHEC, was developed. When EHEC-CHT was assessed using 128 microbes including 49 clinical isolated EHEC strains, EHEC-CHT detected all 49 EHEC strains as typical blue-colored colony regardless of both serotype and susceptibility to potassium tellurite. EHEC-CHT was compared with Japanese commercially available tellurite-based EHEC selective media using 107 clinical patient stool samples. EHEC-CHT showed higher detection ratio than conventional tellurite-based selective media compared, and 7% improvement at least in detection ratio in this study.

对于肠出血性大肠杆菌(EHEC)的临床诊断,从医疗费用的角度来看,需要从粪便样本中捕获活的肠出血性大肠杆菌细胞。然而,由于存在多种血清型和对碲化钾的易感性,因此没有检测活的肠出血性大肠杆菌细胞的全面解决方案,碲化钾通常用作肠出血性肠出血性肠病选择性培养基中的选择性试剂。在这种背景下,开发了一种新的有效的显色培养基系统——肠出血性大肠杆菌清除高温系统(EHEC-HT)。当使用128种微生物(包括49种临床分离的肠出血性大肠杆菌菌株)评估肠出血性肠出血性肠毒素时,无论血清型和对亚碲化钾的易感性如何,肠出血性结肠出血性肠病均检测到所有49种肠出血性肠道出血性大肠菌为典型的蓝色菌落。使用107份临床患者粪便样本,将肠出血性大肠杆菌-耐高温菌与日本市售的基于碲化物的肠出血性肠出性大肠杆菌选择性培养基进行比较。与传统的碲基选择性介质相比,EHC-CHT的检测率更高,本研究的检测率至少提高了7%。
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引用次数: 0
Simple and quick detection of extended-spectrum β-lactamase and carbapenemase-encoding genes using isothermal nucleic acid amplification techniques. 利用等温核酸扩增技术简单快速地检测广谱β-内酰胺酶和碳青霉烯酶编码基因。
Pub Date : 2023-01-01 DOI: 10.4265/jmc.28.4_145
Tatsuya Nakayama, Keisuke Soga

The spread of plasmid-mediated antibiotic-resistant bacteria must be controlled; to this end, developing kits for simple and rapid detection in food and clinical settings is desirable. This review describes the detection of antibiotic resistance genes in extended-spectrum β-lactamase (ESBL)- and carbapenemase-producing bacteria. Loop-mediated isothermal amplification (LAMP), a technique developed in Japan, is a useful diffusion amplification method that does not require equipment like thermal cyclers, and amplifies the target gene in 30 min at about 65℃. Although most reports targeting ESBL and carbapenemase genes are intended for clinical use, environmental and food samples have also been targeted. Recombinase polymerase amplification (RPA) has recently been developed; in RPA, the reaction proceeds under the human skin with reaction conditions of 30 min at 37℃. Detection of ESBL and carbapenemase-encoding genes in food and clinical samples using RPA has been reported in limited studies. However, research on RPA has just begun, and further development is expected.

必须控制质粒介导的抗生素耐药细菌的传播;为此,最好能开发出在食品和临床环境中进行简单快速检测的试剂盒。本综述介绍了对产广谱β-内酰胺酶(ESBL)和碳青霉烯酶细菌中抗生素耐药基因的检测。日本开发的环介导等温扩增(LAMP)技术是一种有用的扩散扩增方法,不需要热循环仪等设备,可在 65℃ 左右的温度下在 30 分钟内扩增目标基因。虽然大多数针对 ESBL 和碳青霉烯酶基因的报告都是针对临床用途的,但环境和食品样本也是目标基因。重组酶聚合酶扩增法(RPA)在 RPA 中,反应在人体皮肤下进行,反应条件为 37℃ 30 分钟。利用 RPA 检测食品和临床样本中的 ESBL 和碳青霉烯酶编码基因的研究报道有限。不过,有关 RPA 的研究才刚刚开始,预计会有进一步的发展。
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引用次数: 0
Changes in bacterial diversity and community structure in drinking water distribution system revealed by high throughput sequencing. 高通量测序揭示饮用水配水系统细菌多样性和群落结构变化。
Pub Date : 2023-01-01 DOI: 10.4265/jmc.28.1_27
Yoshihiko Koizumi, Tomoaki Ichijo, Kimiko Uchii, Masao Nasu

For microbiological management of water quality, it is important to identify bacteria and to understand the community structure. To analyze the community structure during water purification and distribution, we selected a distribution system in which water from other water treatment facilities was not mixed with the target water. Changes in the bacterial community structure during treatment and distribution processes in a slow filtration water treatment facility were analyzed using 16S rRNA gene amplicon sequencing with a portable sequencer MinION. The microbial diversity was reduced by chlorination. The genus level diversity increased during distribution and this diversity was maintained through to the terminal tap water. Yersinia and Aeromonas were dominant in the intake water, and Legionella was dominant in the slow sand filtered water. Chlorination greatly reduced the relative abundance of Yersinia, Aeromonas, and Legionella, and these bacteria were not detected in the terminal tap water. Sphingomonas, Starkeya and Methylobacterium became dominant in the water after chlorination. These bacteria could be used as important indicator bacteria to provide useful information for microbiological control in drinking water distribution systems.

在水质微生物管理中,细菌的鉴定和群落结构的了解是非常重要的。为了分析净水和分配过程中的社区结构,我们选择了一个分配系统,其中其他水处理设施的水不与目标水混合。采用便携式测序仪MinION对慢速过滤水处理设施处理过程中细菌群落结构和分布过程的变化进行分析。氯化作用降低了微生物多样性。在分布过程中,属级多样性增加,这种多样性一直保持到终端自来水。采食水中以耶尔森菌和气单胞菌为主,慢砂滤水中以军团菌为主。氯化大大降低了耶尔森菌、气单胞菌和军团菌的相对丰度,这些细菌在终端自来水中未被检测到。经氯化处理后,鞘单胞菌、Starkeya菌和甲基菌在水体中占主导地位。这些细菌可以作为重要的指示菌,为饮用水配水系统的微生物控制提供有用的信息。
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引用次数: 0
Uses of gaseous hypochlorous acid for controlling microorganisms in indoor spaces. 气态次氯酸用于控制室内空间的微生物。
Pub Date : 2023-01-01 DOI: 10.4265/jmc.28.4_165
Satoshi Fukuzaki

Hypochlorous acid (HOCl) is an active species in the chlorination process. Hypochlorite salts that release hypochlorite ion (OCl-) have been used for more than 200 years as disinfecting, cleaning, deodorizing, and decolorizing agents in various technological fields. In the food industry, sodium hypochlorite is the most widely used among chlorine compounds. The antimicrobial activity of a dilute hypochlorite solution is attributed largely to HOCl because of its cell membrane permeability. OCl- exhibits an excellent cleaning action for organic soils on solid surfaces. HOCl has been used as an aqueous solution, and its objects to be treated are things. In hypochlorite solution, HOCl is volatile and easily volatilized by stirring, bubbling, atomizing, or forced-air vaporization. On the other hand, OCl- is non-volatile and stays in the solution. Recently, the scope of objects to be treated with hypochlorite solution has been expanded to indoor spaces, and the use of gaseous hypochlorous acid (HOCl(g) ) has been studied intensively. This review describes the mechanisms of actions of hypochlorous acid as liquid-based and gaseous disinfectants and provides the evidence for the safety and effectiveness of HOCl(g) for controlling microorganisms in indoor spaces.

次氯酸(HOCl)是氯化过程中的一种活性物质。释放次氯酸根离子(OCl-)的次氯酸盐作为消毒剂、清洁剂、除臭剂和脱色剂在各种技术领域的应用已有 200 多年的历史。在食品工业中,次氯酸钠是使用最广泛的氯化合物。稀次氯酸盐溶液的抗菌活性主要归功于 HOCl,因为它具有细胞膜渗透性。OCl- 对固体表面的有机污垢具有出色的清洁作用。HOCl 被用作水溶液,其处理对象是物品。在次氯酸盐溶液中,HOCl 具有挥发性,很容易通过搅拌、鼓泡、雾化或强制空气气化而挥发。另一方面,OCl- 不易挥发,会留在溶液中。最近,使用次氯酸盐溶液处理的对象范围已扩大到室内空间,人们对气态次氯酸(HOCl(g))的使用进行了深入研究。本综述介绍了次氯酸作为液态和气态消毒剂的作用机理,并提供了 HOCl(g)用于控制室内空间微生物的安全性和有效性的证据。
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引用次数: 0
Inactivation mechanism of SARS-CoV-2 by ozone in aqueous and gas phases. 臭氧在水相和气相中灭活SARS-CoV-2的机理
Pub Date : 2023-01-01 DOI: 10.4265/jmc.28.2_43
Yoshinori Nishiki, Tatsuya Imazu, Katsuhiko Nakamuro, Hirotaka Naitou, Koichi Jeremiah Aoki

The comparison of the inactivation rate of SARS-CoV-2 by ozone in water with that in gas, based on data from references and experiments, has indicated the inactivation rate of the former is remarkably higher than that of the latter. To investigate the reason for this difference, we analyzed the reaction rate using a diffusional reaction model, in which ozone is carried by micro spherical viruses to inactivate the target viruses. Using this model, we can evaluate the amount of ozone required to inactivate a virus based on the ct value. We found that inactivation in gas phase requires 1014-1015 ozone molecules per virus virion, while the inactivation in aqueous phase requires 5×1010 to 5×1011 ozone molecules. This implies that the efficiency in gas phase is 200-20,000 times lower than that in aqueous phase. This is not attributed to the lower probability of collision in gas phase than in aqueous phase. Rather, it may be due to the fact that the ozone and radicals generated by ozone react and subsequently dissipate. We proposed the diffusion of ozone into a spherical virus at a steady state and the decomposition reaction model through radicals.

根据文献资料和实验数据,对臭氧在水中和气体中对SARS-CoV-2的灭活率进行了比较,结果表明臭氧在水中和气体中的灭活率明显高于臭氧。为了研究这种差异的原因,我们使用扩散反应模型分析了反应速率,在扩散反应模型中,臭氧由微球形病毒携带以灭活目标病毒。利用该模型,我们可以根据ct值评估灭活病毒所需的臭氧量。我们发现气相灭活每个病毒粒子需要1014-1015个臭氧分子,而水相灭活需要5×1010 - 5×1011个臭氧分子。这意味着气相的效率比水相的效率低200- 20000倍。这不是由于在气相中碰撞的概率比在水相中低。更确切地说,这可能是由于臭氧和臭氧产生的自由基发生反应并随后消散。提出了臭氧在稳态下向球形病毒扩散的过程,并建立了臭氧通过自由基分解的反应模型。
{"title":"Inactivation mechanism of SARS-CoV-2 by ozone in aqueous and gas phases.","authors":"Yoshinori Nishiki,&nbsp;Tatsuya Imazu,&nbsp;Katsuhiko Nakamuro,&nbsp;Hirotaka Naitou,&nbsp;Koichi Jeremiah Aoki","doi":"10.4265/jmc.28.2_43","DOIUrl":"https://doi.org/10.4265/jmc.28.2_43","url":null,"abstract":"<p><p>The comparison of the inactivation rate of SARS-CoV-2 by ozone in water with that in gas, based on data from references and experiments, has indicated the inactivation rate of the former is remarkably higher than that of the latter. To investigate the reason for this difference, we analyzed the reaction rate using a diffusional reaction model, in which ozone is carried by micro spherical viruses to inactivate the target viruses. Using this model, we can evaluate the amount of ozone required to inactivate a virus based on the ct value. We found that inactivation in gas phase requires 10<sup>14</sup>-10<sup>15</sup> ozone molecules per virus virion, while the inactivation in aqueous phase requires 5×10<sup>10</sup> to 5×10<sup>11</sup> ozone molecules. This implies that the efficiency in gas phase is 200-20,000 times lower than that in aqueous phase. This is not attributed to the lower probability of collision in gas phase than in aqueous phase. Rather, it may be due to the fact that the ozone and radicals generated by ozone react and subsequently dissipate. We proposed the diffusion of ozone into a spherical virus at a steady state and the decomposition reaction model through radicals.</p>","PeriodicalId":73831,"journal":{"name":"Journal of microorganism control","volume":"28 2","pages":"43-48"},"PeriodicalIF":0.0,"publicationDate":"2023-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"9743831","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Theory and application of growth delay analysis of colony formation for evaluation of injured population of the stressed fungal conidia. 菌落形成生长延迟分析在真菌分生孢子损伤种群评估中的理论和应用。
Pub Date : 2023-01-01 DOI: 10.4265/jmc.28.3_93
Ryoko Asada, Yoshie Yamada, Jin J Sakamoto, Masakazu Furuta, Tetsuaki Tsuchido

A new concept of injured population assessment is proposed, in which the size of the injured population in stressed mold spores is evaluated by analyzing the colony formation process on a solid agar medium. In this method, a small paper disc containing mold spores is placed on a subculture agar plate, and the linear increase in the radius of the colony formed by development from the spore is measured over time. Then, the principle of the previously reported growth delay analysis (GDA) method originally using a liquid medium is applied to obtain the integrated viable ratio (IV) of the stressed population from the delay time relative to the growth of the unstressed population. On the other hand, the viable ratio (V) to the initial value as the colony count obtained with the stressed culture is obtained; the difference between the logarithms of V and IV is determined as the log number of the injured population. Applying this analysis method to heated spores of Cladosporium sphaerospermum, we determined the size of the injured population that occurred. This method was considered to be effective as a new method for quantifying injured populations using a solid medium.

提出了一种新的损伤群体评估概念,通过分析固体琼脂培养基上菌落形成过程来评估应力霉菌孢子中损伤群体的大小。在这种方法中,将含有霉菌孢子的小纸片放置在继代培养琼脂板上,并测量孢子发育形成的菌落半径随时间的线性增加。然后,应用先前报道的最初使用液体培养基的生长延迟分析(GDA)方法的原理,从延迟时间相对于非应激群体的生长获得应激群体的综合存活率(IV)。另一方面,获得作为用应激培养物获得的菌落计数的初始值的存活率(V);V和IV的对数之间的差被确定为受伤群体的对数。将这种分析方法应用于球形孢子枝孢的加热孢子,我们确定了发生的伤害群体的大小。该方法被认为是一种使用固体介质量化受伤人群的新方法。
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引用次数: 0
Common presence of plasmid encoding blaCTX-M-55 in extended-spectrum β-lactamase-producing Salmonella enterica and Escherichia coli isolates from the same edible river fish. 编码blaCTX-M-55的质粒在产β-内酰胺酶的肠炎沙门氏菌和大肠杆菌分离株中普遍存在。
Pub Date : 2023-01-01 DOI: 10.4265/jmc.28.2_49
Tatsuya Nakayama, Shiori Yamamoto, Natsuki Ohata, Takahiro Yamaguchi, Michio Jinnai, Doan Tran Nguyen Minh, Oanh Nguyen Hoang, Hien LE Thi, Phong Ngo Thanh, Phuong Hoang Hoai, Phuc Nguyen DO, Chinh Dang VAN, Yuko Kumeda, Atsushi Hase

The transmission of potentially life-threatening plasmid-mediated antibiotic-resistant bacteria poses a major threat to public health. This study aimed to determine the presence of commonly observed plasmids encoding plasmid-mediated antibiotic-resistance genes in Salmonella and Escherichia coli isolates from fishery products. Eighty river fishes were purchased from retail stores and supermarkets in Vietnam. Only Salmonella-positive fishes were used for antibiotic-resistant E. coli isolation. Salmonella serotyping was performed using Salmonella antisera. Isolated bacterial DNA was extracted, and antibiotic susceptibility, resistance genes, and replicon typing were determined. Our results showed that Salmonella was isolated from 12.5% (10/80) of the river fishes. Cefotaxime-resistant Salmonella was isolated from 3.8% (3/80) of the fishes and colistin-resistant Salmonella from 1.3% (1/80) . Salmonella serotyping revealed Potsdam, Schwarzengrund, Bardo/Newport, Give, Infantis, Kentucky, and Typhimurium. Multiplex polymerase chain reaction revealed the presence of extended-spectrum β-lactamase-related genes blaCTX-M-55 and blaCTX-M-65 and the colistin resistance gene mcr-1. To date, no study has reported an antibiotic-resistance plasmid present in multiple bacteria collected from the same food. Thus, horizontal transmission of antibiotic-resistance plasmids may occur at the food level.

可能危及生命的质粒介导的耐抗生素细菌的传播对公共卫生构成重大威胁。本研究旨在确定从水产品中分离的沙门氏菌和大肠杆菌中是否存在常见的编码质粒介导的抗生素耐药基因的质粒。从越南的零售商店和超市购买了80条河鱼。只有沙门氏菌阳性的鱼类被用来分离耐抗生素大肠杆菌。使用沙门氏菌抗血清进行沙门氏菌血清分型。提取分离的细菌DNA,测定抗生素敏感性、耐药基因和复制子分型。结果表明,沙门菌检出率为12.5%(10/80)。对头孢噻肟耐药沙门氏菌占3.8%(3/80),对粘菌素耐药沙门氏菌占1.3%(1/80)。沙门氏菌血清分型显示波茨坦、施瓦茨格兰、巴尔多/纽波特、吉夫、婴儿、肯塔基和鼠伤寒。多重聚合酶链反应显示存在广谱β-内酰胺酶相关基因blaCTX-M-55和blaCTX-M-65以及粘菌素耐药基因mcr-1。迄今为止,还没有研究报告从同一种食物中采集的多种细菌中存在抗生素抗性质粒。因此,抗生素抗性质粒的水平传播可能发生在食物层面。
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引用次数: 3
Five-year trends in bacterial contamination of dialysis equipment. 透析设备细菌污染的五年趋势。
Pub Date : 2023-01-01 DOI: 10.4265/jmc.28.3_69
Eiichi Osono, Kazumi Honda, Yuki Inoue, Kyouko Ichimura, Chisako Kamano, Shinya Kawamoto, Yoshihiko Norose, Shun Takaku, Rimpei Morita, Tetsuaki Tsuchido

Bedside dialysis monitoring equipment for hemodialysis are located in the bioburden section upstream of the endotoxin-retentive filter for dialysis fluid sterilization. We observed 26 equipment at our institution for bacterial contamination at least once every 4 weeks for 5 years with another ultrafiltration membrane upstream to prevent bacterial contamination. Bacterial contamination levels were highest and most diverse at the time of the first flush. During subsequent initial cleanng, the contamination level decreased, and bacterial species converged almost exclusively to one genus, namely Methylobacterium spp. During clinical use, the equipment were cleaned and disinfected daily after dialysis, and daily operations and maintenance were performed using aseptic techniques. Although the frequency of bacterial detection decreased annually, the same bacterial genotypes observed at the first flush were isolated even after long time periods and were thought to persist in the equipment possibly by forming biofilm. Pseudomonas aeruginosa was newly detected after the replacement of parts during breakdown maintenance, indicating the need to sterilize replacement parts. Thus, the bioburden should be assessed regularly as part of the management of in-house-produced dialysis fluid.

用于血液透析的床边透析监测设备位于用于透析液消毒的内毒素保留过滤器上游的生物负载部分。我们在我们机构观察了26台设备的细菌污染情况,至少每4周一次,持续5年,并在上游使用另一种超滤膜来防止细菌污染。在第一次冲洗时,细菌污染水平最高且种类最多。在随后的初步清洁过程中,污染水平降低,细菌种类几乎完全集中在一个属,即甲基杆菌属。在临床使用过程中,透析后每天对设备进行清洁和消毒,并使用无菌技术进行日常操作和维护。尽管细菌检测频率每年都在下降,但即使在长时间后,在第一次冲洗时观察到的相同细菌基因型也被分离出来,并且被认为可能通过形成生物膜而在设备中持续存在。在故障维修期间更换零件后,新检测到铜绿假单胞菌,表明需要对更换零件进行消毒。因此,应定期评估生物负荷,作为内部生产透析液管理的一部分。
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引用次数: 0
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Journal of microorganism control
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