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American Journal of Medical Genetics Part C: Seminars in Medical Genetics最新文献

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Development of webcam-collected and artificial-intelligence-derived social and cognitive performance measures for neurodevelopmental genetic syndromes 开发网络摄像头收集和人工智能衍生的神经发育遗传综合征的社会和认知表现测量。
IF 3.1 3区 医学 Q2 GENETICS & HEREDITY Pub Date : 2023-08-03 DOI: 10.1002/ajmg.c.32058
Thomas W. Frazier, Robyn M. Busch, Patricia Klaas, Katherine Lachlan, Shafali Jeste, Alexander Kolevzon, Eva Loth, Jacqueline Harris, Leslie Speer, Tom Pepper, Kristin Anthony, J. Michael Graglia, Christal G. Delagrammatikas, Sandra Bedrosian-Sermone, Constance Smith-Hicks, Katie Huba, Robert Longyear, LeeAnne Green-Snyder, Frederick Shic, Mustafa Sahin, Charis Eng, Antonio Y. Hardan, Mirko Uljarević

This study focused on the development and initial psychometric evaluation of a set of online, webcam-collected, and artificial intelligence-derived patient performance measures for neurodevelopmental genetic syndromes (NDGS). Initial testing and qualitative input was used to develop four stimulus paradigms capturing social and cognitive processes, including social attention, receptive vocabulary, processing speed, and single-word reading. The paradigms were administered to a sample of 375 participants, including 163 with NDGS, 56 with idiopathic neurodevelopmental disability (NDD), and 156 neurotypical controls. Twelve measures were created from the four stimulus paradigms. Valid completion rates varied from 87 to 100% across measures, with lower but adequate completion rates in participants with intellectual disability. Adequate to excellent internal consistency reliability (α = 0.67 to 0.95) was observed across measures. Test–retest reproducibility at 1-month follow-up and stability at 4-month follow-up was fair to good (r = 0.40–0.73) for 8 of the 12 measures. All gaze-based measures showed evidence of convergent and discriminant validity with parent-report measures of other cognitive and behavioral constructs. Comparisons across NDGS groups revealed distinct patterns of social and cognitive functioning, including people with PTEN mutations showing a less impaired overall pattern and people with SYNGAP1 mutations showing more attentional, processing speed, and social processing difficulties relative to people with NFIX mutations. Webcam-collected performance measures appear to be a reliable and potentially useful method for objective characterization and monitoring of social and cognitive processes in NDGS and idiopathic NDD. Additional validation work, including more detailed convergent and discriminant validity analyses and examination of sensitivity to change, is needed to replicate and extend these observations.

这项研究的重点是开发一套在线、网络摄像头收集和人工智能衍生的神经发育遗传综合征(NDGS)患者表现测量方法,并对其进行初步心理测量评估。最初的测试和定性输入用于开发四种捕捉社会和认知过程的刺激范式,包括社会注意力、接受性词汇、处理速度和单词阅读。对375名参与者进行了研究,其中163名患有NDGS,56名患有特发性神经发育障碍(NDD),156名神经正常对照。根据四种刺激模式制定了十二项措施。有效完成率从87%到100%不等,智障参与者的完成率较低但足够。足以实现卓越的内部一致性可靠性(α = 0.67至0.95)。1个月随访时的重复性和4个月随访的稳定性为一般至良好(r = 0.40-0.73)。所有基于凝视的测量都显示出与其他认知和行为结构的父母报告测量的收敛和判别有效性的证据。NDGS组之间的比较揭示了不同的社会和认知功能模式,包括PTEN突变的人总体模式受损程度较低,SYNGAP1突变的人与NFIX突变的人相比,注意力、处理速度和社会处理困难更大。网络摄像头收集的表现测量似乎是一种可靠且潜在有用的方法,用于客观表征和监测NDGS和特发性NDD的社会和认知过程。需要进行额外的验证工作,包括更详细的收敛和判别有效性分析以及对变化敏感性的检查,以复制和扩展这些观察结果。
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引用次数: 1
Applications of artificial intelligence in clinical laboratory genomics 人工智能在临床实验室基因组学中的应用。
IF 3.1 3区 医学 Q2 GENETICS & HEREDITY Pub Date : 2023-07-28 DOI: 10.1002/ajmg.c.32057
Swaroop Aradhya, Flavia M. Facio, Hillery Metz, Toby Manders, Alexandre Colavin, Yuya Kobayashi, Keith Nykamp, Britt Johnson, Robert L. Nussbaum

The transition from analog to digital technologies in clinical laboratory genomics is ushering in an era of “big data” in ways that will exceed human capacity to rapidly and reproducibly analyze those data using conventional approaches. Accurately evaluating complex molecular data to facilitate timely diagnosis and management of genomic disorders will require supportive artificial intelligence methods. These are already being introduced into clinical laboratory genomics to identify variants in DNA sequencing data, predict the effects of DNA variants on protein structure and function to inform clinical interpretation of pathogenicity, link phenotype ontologies to genetic variants identified through exome or genome sequencing to help clinicians reach diagnostic answers faster, correlate genomic data with tumor staging and treatment approaches, utilize natural language processing to identify critical published medical literature during analysis of genomic data, and use interactive chatbots to identify individuals who qualify for genetic testing or to provide pre-test and post-test education. With careful and ethical development and validation of artificial intelligence for clinical laboratory genomics, these advances are expected to significantly enhance the abilities of geneticists to translate complex data into clearly synthesized information for clinicians to use in managing the care of their patients at scale.

临床实验室基因组学从模拟技术向数字技术的转变正在开创一个“大数据”时代,其方式将超过人类使用传统方法快速、可复制地分析这些数据的能力。准确评估复杂的分子数据以促进基因组疾病的及时诊断和管理将需要支持性的人工智能方法。这些已经被引入临床实验室基因组学,以识别DNA测序数据中的变体,预测DNA变体对蛋白质结构和功能的影响,为致病性的临床解释提供信息,将表型本体与通过外显子组或基因组测序识别的遗传变体联系起来,帮助临床医生更快地得出诊断答案,将基因组数据与肿瘤分期和治疗方法相关联,在分析基因组数据期间利用自然语言处理来识别关键的已发表医学文献,并使用交互式聊天机器人来识别有资格进行基因检测的个人或提供检测前和检测后教育。随着人工智能在临床实验室基因组学中的谨慎和合乎道德的开发和验证,这些进展有望显著提高遗传学家将复杂数据转化为清晰合成信息的能力,供临床医生用于大规模管理患者护理。
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引用次数: 3
Table of Contents, Volume 193, Number 2, June 2023 目录,第193卷第2期,2023年6月
IF 3.1 3区 医学 Q2 GENETICS & HEREDITY Pub Date : 2023-06-21 DOI: 10.1002/ajmg.c.31977
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引用次数: 0
Publication schedule for 2023 2023年出版时间表
IF 3.1 3区 医学 Q2 GENETICS & HEREDITY Pub Date : 2023-06-21 DOI: 10.1002/ajmg.c.31978
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引用次数: 0
Cover Image, Volume 193, Number 2, June 2023 封面图片,第193卷,第2期,2023年6月
IF 3.1 3区 医学 Q2 GENETICS & HEREDITY Pub Date : 2023-06-21 DOI: 10.1002/ajmg.c.31979

Cover legend: Kabuki syndrome across the lifespan

Images depicting physical exam features of three adult patients with KMT2D-related Kabuki syndrome. For Patients 7 and 8, photographs illustrate the evolution of the facial phenotype over time.

封面传说:一生中的歌舞伎综合征图片描绘了三名患有KMT2D相关歌舞伎综合症的成年患者的体检特征。对于患者7和8,照片显示了面部表型随时间的演变。
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引用次数: 0
Unmasking the challenges of Kabuki syndrome in adulthood: A case series 揭示歌舞伎综合症在成年期的挑战:一个案例系列
IF 3.1 3区 医学 Q2 GENETICS & HEREDITY Pub Date : 2023-06-09 DOI: 10.1002/ajmg.c.32054
Jessica R. C. Priestley, Alyssa L. Rippert, Courtney Condit, Kosuke Izumi, Staci Kallish, Theodore G. Drivas

Kabuki syndrome is a recognizable Mendelian disorder characterized by the clinical constellation of childhood hypotonia, developmental delay or intellectual impairment, and characteristic dysmorphism resulting from monoallelic pathogenic variants in KMT2D or KDM6A. In the medical literature, most reported patients are children, and data is lacking on the natural history of the condition across the lifespan, with little known about adult-specific presentations and symptoms. Here, we report the results of a retrospective chart review of eight adult patients with Kabuki syndrome, seven of whom are molecularly confirmed. We use their trajectories to highlight the diagnostic challenges unique to an adult population, expand on neurodevelopmental/psychiatric phenotypes across the lifespan, and describe adult-onset medical complications, including a potential cancer risk and unusual and striking premature/accelerated aging phenotype.

歌舞伎综合征是一种可识别的孟德尔障碍,其临床特征是由KMT2D或KDM6A的单等位基因致病变异引起的儿童张力低下、发育迟缓或智力障碍以及特征性畸形。在医学文献中,大多数报告的患者是儿童,缺乏关于该疾病在整个生命周期中的自然史的数据,对成人特有的表现和症状知之甚少。在此,我们报告了对8名成年歌舞伎综合征患者的回顾性图表回顾的结果,其中7人被分子证实。我们使用他们的轨迹来突出成人人群特有的诊断挑战,扩展整个生命周期的神经发育/精神表型,并描述成人发病的医学并发症,包括潜在的癌症风险和不寻常的和显著的过早/加速衰老表型。
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引用次数: 0
Autosomal dominant genodermatoses in adults being heralded by superimposed skin lesions in children 常染色体显性遗传性皮肤病在成人是预示着叠加皮肤病变的儿童
IF 3.1 3区 医学 Q2 GENETICS & HEREDITY Pub Date : 2023-06-08 DOI: 10.1002/ajmg.c.32055
Rudolf Happle

In autosomal dominant skin disorders, pronounced mosaic involvement may sometimes occur in the neonate, originating in a heterozygous embryo from early loss of heterozygosity, probably during the first week after fertilization. In biallelic phenotypes, such overlaying mosaic involvement may coexist with disseminated mosaicism, for example, in neurofibromatosis or tuberous sclerosis. In other phenotypes, however, classical nonsegmental involvement tends to appear much later, which is why the superimposed mosaic is a heralding feature. In Brooke–Spiegler syndrome (eccrine cylindromatosis), a large pedigree documented a 5-year-old boy with multiple, congenital small eccrine cylindromas along the lines of Blaschko. Disseminated cylindromas were absent because they usually appear in adulthood. ̶ In Hornstein–Knickenberg syndrome, an affected woman had an 8-year-old son with a nevus comedonicus-like lesion exemplifying a forerunner of the syndrome. (“Birt-Hogg-Dubé syndrome” represents a nonsyndromic type of hereditary perifollicular fibromas.) In glomangiomatosis, neonatal superimposed mosaicism is a heralding feature because disseminated lesions appear during puberty or adulthood. Linear porokeratosis is a harbinger of disseminated porokeratosis that develops 30 or 40 years later. ̶ Cases of superimposed linear Darier disease were forerunners of nonsegmental manifestation. ̶ In a case of Hailey–Hailey disease, neonatal mosaic lesions heralded nonsegmental involvement that began 22 years later.

在常染色体显性皮肤病中,新生儿有时会出现明显的嵌合体累及,这种累及可能发生在受精后的第一周,源于杂合性早期丧失的杂合胚胎。在双等位基因表型中,这种覆盖嵌合体累及可能与播散性嵌合体共存,例如在神经纤维瘤病或结节性硬化症中。然而,在其他表型中,经典的非节段性参与往往出现得更晚,这就是为什么重叠的马赛克是一个预示特征。在Brooke-Spiegler综合征(内分泌圆柱状病)中,一个大型谱系记录了一个5岁男孩,他患有多发性先天性小内分泌圆柱状瘤,沿着Blaschko线。弥散性柱状瘤未见,因为它们通常出现在成年期。在霍恩斯坦-尼克伯格综合征中,一位受影响的妇女有一个8岁的儿子,他身上有一种类似于粉刺样的病变,这是该综合征的前兆。(“birt - hogg - dub综合征”是一种非综合征型的遗传性滤泡周围纤维瘤。)在血管瘤病中,新生儿重叠嵌合体是一个预示性特征,因为弥散性病变出现在青春期或成年期。线性角化症是30或40年后发生的弥散性角化症的先兆。叠加线性达里尔病的病例是非节段性表现的先兆。在一个海莉-海莉病的病例中,新生儿马赛克病变预示着22年后开始的非节段性病变。
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引用次数: 0
Spectrum of white matter abnormalities associated with FOXC1-related disorders in two unrelated cases 两个不相关病例中foxc1相关疾病的白质异常谱
IF 3.1 3区 医学 Q2 GENETICS & HEREDITY Pub Date : 2023-05-31 DOI: 10.1002/ajmg.c.32051
Tasnim Tabassum, D'Agostino Maria Daniela, Roberta La Piana

The purpose of this study is to document the wide spectrum of white matter abnormalities associated with FOXC1 pathogenic variants. We report two adult individuals—a 60-year-old individual and a 24-year-old one, presenting with hearing loss, anterior eye segment dysgenesis, and very different severity of cerebral small vessel disease. Molecular testing documented the presence of FOXC1 pathogenic variants in both individuals. Our paper documents the broad spectrum of radiological white matter involvement in adult individuals with FOXC1-related disorders. Mild forms of FOXC1-related small vessel disease, as we observed in individual 2, should be included in the list of genetic mimickers of MS.

本研究的目的是记录与FOXC1致病性变体相关的广泛白质异常。我们报告了两名成年患者——一名60岁的患者和一名24岁的患者,他们表现为听力损失、眼前节发育不全和严重程度截然不同的大脑小血管疾病。分子检测记录了FOXC1致病性变体在两个个体中的存在。我们的论文记录了患有FOXC1相关疾病的成年个体中广泛的放射性白质受累。正如我们在个体2中观察到的,轻度FOXC1相关的小血管疾病应包括在MS的遗传拟态者列表中。
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引用次数: 0
Neurodevelopmental and other psychiatric disorders in 22q11.2 deletion syndrome from childhood to adult age: Prospective longitudinal study of 100 individuals 22q11.2缺失综合征从儿童期到成年期的神经发育和其他精神疾病:100人的前瞻性纵向研究
IF 3.1 3区 医学 Q2 GENETICS & HEREDITY Pub Date : 2023-05-29 DOI: 10.1002/ajmg.c.32052
Lena Wallin, Christopher Gillberg, Elisabeth Fernell, Carina Gillberg, Eva Billstedt

The 22q11.2 deletion syndrome (22q11.2DS), affects physical as well as cognitive and emotional functioning with increased risk for psychiatric and behavioral problems. This longitudinal study of 79 individuals (18–50 years) with 22q11.2DS investigated neurodevelopmental (NDD) and psychiatric disorders in adulthood, evaluated the stability of childhood diagnoses over time, and examined associations between clinical characteristics in childhood/adolescence and diagnostic outcome in adult age. Examination using validated instruments for cognitive, psychiatric, and global functional problems in the context of an in-depth clinical evaluation found adult age stability of NDD diagnoses made in childhood, however, rates increased at follow-up. Rates of anxiety, mood, and psychotic disorders were high, with a majority meeting diagnostic criteria for one or more psychiatric disorder. The rate of psychotic disorders was much lower compared to many other studies. Variability in functioning at follow-up was primarily associated with intellectual ability at T1. The findings obtained highlight the increased risk of NDD and psychiatric problems and of cognitive impairment and reduced levels of global functioning over time. Results emphasize the importance of clinical follow-up to enable appropriate support for the promotion of optimal health along with a need for future research on effective interventions and treatment strategies.

22q11.2缺失综合症(22q11.2 ds)会影响身体、认知和情感功能,并增加精神和行为问题的风险。这项对79名22q11.2DS患者(18-50岁)的纵向研究调查了成年期的神经发育(NDD)和精神疾病,评估了儿童期诊断随时间的稳定性,并检查了儿童期/青春期临床特征与成年期诊断结果之间的关系。在深入临床评估的背景下,使用经过验证的工具进行认知、精神和整体功能问题的检查发现,儿童时期诊断的NDD在成年年龄的稳定性,然而,随访时发生率增加。焦虑、情绪和精神障碍的比例很高,大多数人符合一种或多种精神障碍的诊断标准。与许多其他研究相比,精神病的发病率要低得多。随访时的功能变异性主要与T1时的智力有关。研究结果强调,随着时间的推移,NDD、精神问题和认知障碍的风险增加,整体功能水平下降。结果强调了临床随访的重要性,以便为促进最佳健康提供适当的支持,以及未来研究有效干预和治疗策略的必要性。
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引用次数: 1
Spondyloepimetaphyseal dysplasia with joint laxity type 2: Aggregating the literature and reporting on the life of a 66-year-old man 2型椎弓根骺端发育不良伴关节松弛:收集66岁男性的文献和生活报告
IF 3.1 3区 医学 Q2 GENETICS & HEREDITY Pub Date : 2023-05-24 DOI: 10.1002/ajmg.c.32053
Alexander Beke, Karina da Costa Silveira, Taryn Athey, Peter Kannu

Spondyloepimetaphyseal dysplasia with joint laxity, leptodactylic type (SEMDJL2), is a rare bone dysplasia that results from hotspot (amino acids148/149) mutations in KIF22. Clinically, affected individuals present with generalized joint laxity, limb malalignment, midface hypoplasia, gracile digits, postnatal short stature, and occasionally, tracheolaryngomalacia; additionally, radiological features include severe epi-metaphyseal abnormalities and slender metacarpals. This report evaluates the progression of SEMDJL2 throughout the life of the oldest individual reported in the literature—a 66-year-old man with a pathogenic KIF22 variant (c.443C > T, p.Pro148Leu). The proband developed many of the clinical and radiological alterations consistent with the presentation of other individuals in the literature. Interestingly, throughout his life, joint limitation progressed, beginning with knee and elbow stricture (year 20), and later, limitation of the shoulders, hips, ankles, and wrists (year 40). This differs from previous case reports, where joint limitation is identified in 1-to-2 joints. Cumulatively, the progressive body-wide joint limitation resulted in early retirement (year 45) and difficulty completing daily tasks and managing personal hygiene culminating in the need for assisted living (year 65). In conclusion, we report on the clinical and radiological developments of a 66-year-old man with SEMDJL2, that developed significant joint limitation in adulthood.

伴有关节松弛的细指型脊椎干骺端发育不良(SEMDJL2)是一种罕见的骨发育不良,由KIF22的热点(氨基酸148/149)突变引起。临床上,受影响的个体表现为全身性关节松弛、肢体错位、面中部发育不全、手指纤细、出生后身材矮小,偶尔还会出现气管喉软化;此外,放射学特征包括严重的干骺端异常和细长掌骨。本报告评估了文献中报道的年龄最大的个体——一名患有致病性KIF22变体的66岁男性(约443C >; T、 p.Pro148Leu)。先证者出现了许多与文献中其他个体的表现一致的临床和放射学改变。有趣的是,在他的一生中,关节限制一直在发展,从膝盖和肘部狭窄开始(20岁),到后来肩膀、臀部、脚踝和手腕的限制(40岁)。这与之前的病例报告不同,在以前的病例报告中,关节限制是在1到2个关节中确定的。累积起来,全身关节逐渐受限导致提前退休(45岁),难以完成日常任务和管理个人卫生,最终需要辅助生活(65岁)。总之,我们报告了一名患有SEMDJL2的66岁男性的临床和放射学发展,该男性在成年后出现了严重的关节限制。
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引用次数: 0
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American Journal of Medical Genetics Part C: Seminars in Medical Genetics
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