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The undiagnosed diseases program: Approach to diagnosis. 未确诊疾病计划:诊断方法。
Pub Date : 2020-04-13 DOI: 10.3233/TRD-190045
Ellen F Macnamara, Precilla D'Souza, Cynthia J Tifft

Undiagnosed and rare conditions are collectively common and affect millions of people worldwide. The NIH Undiagnosed Diseases Program (UDP) strives to achieve both a comprehensive diagnosis and a better understanding of the mechanisms of disease for many of these individuals. Through the careful review of records, a well-orchestrated inpatient evaluation, genomic sequencing and testing, and with the use of emerging strategies such as matchmaking programs, the UDP succeeds nearly 30 percent of the time for these highly selective cases. Although the UDP process is built on a unique set of resources, case examples demonstrate steps genetic professionals can take, in both clinical and research settings, to arrive at a diagnosis for their most challenging cases.

未确诊疾病和罕见疾病都很常见,影响着全球数百万人。美国国立卫生研究院(NIH)未确诊疾病项目(UDP)致力于为这些人中的许多人提供全面诊断,并使他们更好地了解疾病的机制。通过仔细审查病历、精心安排住院评估、基因组测序和检测,以及使用匹配程序等新兴策略,UDP 在这些高度选择性病例中的成功率接近 30%。尽管 UDP 流程建立在一套独特的资源之上,但案例展示了遗传学专业人员在临床和研究环境中可以采取的步骤,以便为最具挑战性的病例做出诊断。
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引用次数: 0
Retinal disease in ciliopathies: Recent advances with a focus on stem cell-based therapies 睫状体病变视网膜疾病:干细胞治疗的最新进展
Pub Date : 2019-07-04 DOI: 10.3233/TRD-190038
H. Chen, Emily Welby, Tiansen Li, A. Swaroop
Ciliopathies display extensive genetic and clinical heterogeneity, varying in severity, age of onset, disease progression and organ systems affected. Retinal involvement, as demonstrated by photoreceptor dysfunction or death, is a highly penetrant phenotype among a vast majority of ciliopathies. Photoreceptor cells possess a specialized and modified sensory cilium with membrane discs where efficient photon capture and ensuing signaling cascade initiate the visual process. Disruptions of cilia biogenesis and protein transport lead to impairment of photoreceptor function and eventually degeneration. Despite advances in elucidation of ciliogenesis and photoreceptor cilia defects, we have limited understanding of pathogenic mechanisms underlying retinal phenotype(s) observed in human ciliopathies. Patient-derived induced pluripotent stem cell (iPSC)-based approaches offer a unique opportunity to complement studies with model organisms and examine cilia disease relevant to humans. Three-dimensional retinal organoids from iPSC lines feature laminated cytoarchitecture, apical-basal polarity and emergence of a ciliary structure, thereby permitting pathogenic modeling of human photoreceptors in vitro. Here, we review the biology of photoreceptor cilia and associated defects and discuss recent progress in evolving treatment modalities, especially using patient-derived iPSCs, for retinal ciliopathies.
脊柱侧凸表现出广泛的遗传和临床异质性,其严重程度、发病年龄、疾病进展和受影响的器官系统各不相同。视网膜受累,如光感受器功能障碍或死亡所示,是绝大多数纤毛疾病中的一种高度渗透表型。光感受器细胞拥有一个专门的、经过修饰的感觉纤毛和膜盘,在那里有效的光子捕获和随后的信号级联启动了视觉过程。纤毛生物发生和蛋白质转运的中断导致光感受器功能受损并最终退化。尽管在阐明纤毛形成和光感受器纤毛缺陷方面取得了进展,但我们对在人类纤毛疾病中观察到的视网膜表型的致病机制了解有限。基于患者诱导多能干细胞(iPSC)的方法提供了一个独特的机会,可以用模型生物补充研究,并检查与人类相关的纤毛疾病。iPSC系的三维视网膜类器官具有层状细胞结构、顶端基底极性和纤毛结构的出现,从而允许在体外对人类光感受器进行致病性建模。在这里,我们回顾了光感受器纤毛和相关缺陷的生物学,并讨论了视网膜纤毛病治疗模式的最新进展,特别是使用患者衍生的iPSC。
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引用次数: 24
Clinical characteristics of individual organ system disease in non-motile ciliopathies. 非运动性纤毛病个体器官系统疾病的临床特征
Pub Date : 2019-07-04 DOI: 10.3233/TRD-190033
Angela Grochowsky, Meral Gunay-Aygun

Non-motile ciliopathies (disorders of the primary cilia) include autosomal dominant and recessive polycystic kidney diseases, nephronophthisis, as well as multisystem disorders Joubert, Bardet-Biedl, Alström, Meckel-Gruber, oral-facial-digital syndromes, and Jeune chondrodysplasia and other skeletal ciliopathies. Chronic progressive disease of the kidneys, liver, and retina are common features in non-motile ciliopathies. Some ciliopathies also manifest neurological, skeletal, olfactory and auditory defects. Obesity and type 2 diabetes mellitus are characteristic features of Bardet-Biedl and Alström syndromes. Overlapping clinical features and molecular heterogeneity of these ciliopathies render their diagnoses challenging. In this review, we describe the clinical characteristics of individual organ disease for each ciliopathy and provide natural history data on kidney, liver, retinal disease progression and central nervous system function.

非运动性纤毛病(原发纤毛疾病)包括常染色体显性和隐性多囊肾病、肾病,以及多系统疾病Joubert、Bardet-Biedl、Alström、Meckel-Gruber、口-面-指综合征、Jeune软骨发育不良和其他骨性纤毛病。慢性进行性肾脏、肝脏和视网膜病变是非运动性纤毛病的共同特征。一些纤毛病还表现为神经、骨骼、嗅觉和听觉缺陷。肥胖和2型糖尿病是Bardet-Biedl综合征和Alström综合征的特征。这些纤毛病的重叠临床特征和分子异质性使其诊断具有挑战性。在这篇综述中,我们描述了每种纤毛病的个体器官疾病的临床特征,并提供了肾脏、肝脏、视网膜疾病进展和中枢神经系统功能的自然史数据。
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引用次数: 0
The molecular genetics of Joubert syndrome and related ciliopathies: The challenges of genetic and phenotypic heterogeneity Joubert综合征和相关纤毛疾病的分子遗传学:遗传和表型异质性的挑战
Pub Date : 2019-07-04 DOI: 10.3233/TRD-190041
M. Parisi
Joubert syndrome (JS; MIM PS213300) is a rare, typically autosomal recessive disorder characterized by cerebellar vermis hypoplasia and a distinctive malformation of the cerebellum and brainstem identified as the “molar tooth sign” on brain MRI. Other universal features include hypotonia with later ataxia and intellectual disability/developmental delay, with additional features consisting of oculomotor apraxia and abnormal respiratory pattern. Notably, other, more variable features include renal cystic disease, typically nephronophthisis, retinal dystrophy, and congenital hepatic fibrosis; skeletal changes such as polydactyly and findings consistent with short-rib skeletal dysplasias are also seen in many subjects. These pleiotropic features are typical of a number of disorders of the primary cilium, and make the identification of causal genes challenging given the significant overlap between JS and other ciliopathy conditions such as nephronophthisis and Meckel, Bardet-Biedl, and COACH syndromes. This review will describe the features of JS, characterize the 35 known genes associated with the condition, and describe some of the genetic conundrums of JS, such as the heterogeneity of founder effects, lack of genotype-phenotype correlations, and role of genetic modifiers. Finally, aspects of JS and related ciliopathies that may pave the way for development of therapeutic interventions, including gene therapy, will be described.
Joubert综合征(JS;MIM PS213300)是一种罕见的、典型的常染色体隐性遗传疾病,其特征是小脑扁桃体发育不全和小脑和脑干的一种独特畸形,在脑MRI上被确定为“臼齿征”。其他普遍特征包括肌张力减退伴后期共济失调和智力残疾/发育迟缓,其他特征包括动眼症、失用症和呼吸模式异常。值得注意的是,其他更可变的特征包括肾囊性疾病,典型的是肾病、视网膜营养不良和先天性肝纤维化;在许多受试者中也可以看到骨骼变化,如多指畸形和与短肋骨骨骼发育不良一致的结果。这些多效性特征是许多原发纤毛疾病的典型特征,鉴于JS与其他纤毛疾病(如肾病综合征和Meckel、Bardet-Biedl和COACH综合征)之间的显著重叠,因此确定致病基因具有挑战性。这篇综述将描述JS的特征,描述与该疾病相关的35个已知基因,并描述JS的一些遗传难题,如创始人效应的异质性、缺乏基因型-表型相关性以及遗传修饰因子的作用。最后,将描述JS和相关纤毛疾病的各个方面,这些方面可能为包括基因治疗在内的治疗干预措施的发展铺平道路。
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引用次数: 81
Primary Ciliary Dyskinesia (PCD): A genetic disorder of motile cilia. 原发性纤毛运动障碍(PCD):一种遗传性纤毛运动障碍。
Pub Date : 2019-01-01 DOI: 10.3233/TRD-190036
M. Leigh, A. Horani, B. Kinghorn, M. O'Connor, M. Zariwala, M. Knowles
Primary ciliary dyskinesia (PCD) is a genetic disorder of motile cilia. Clinical features include chronic oto-sinopulmonary disease, laterality defects, and male fertility reflecting impaired function of respiratory cilia in the upper and lower respiratory tracts, nodal cilia in the embryonic node and sperm tails, respectively. Recent studies have identified over 40 PCD-associated genes that encode proteins involved in ciliary biogenesis, assembly, structure, or function. Mutations in these genes account for approximately 70% of PCD cases; therefore, further gene discovery is expected. The diagnosis of PCD is challenging because no single test has the required diagnostic accuracy. Recent efforts have focused on standardizing and validating a panel of tests (including assessment for key clinical features, nasal nitric oxide measurement, ciliary ultrastructure analysis, and PCD genetic testing) to be used at PCD Centers to accurately diagnose PCD. Multi-center research programs focused on PCD in North America and Europe have been crucial for PCD gene discovery, advancing our understanding of the natural history of PCD and launching multi-center clinical trials.
原发性纤毛运动障碍(PCD)是一种遗传性纤毛运动性疾病。临床特征包括慢性耳-肺疾病、侧侧缺陷和男性生育能力,分别表现为上、下呼吸道呼吸纤毛、胚胎结纤毛和精子尾纤毛功能受损。最近的研究已经确定了超过40个与pcd相关的基因,这些基因编码了参与纤毛生物发生、组装、结构或功能的蛋白质。这些基因突变约占PCD病例的70%;因此,期待进一步的基因发现。PCD的诊断是具有挑战性的,因为没有单一的测试具有所需的诊断准确性。最近的努力集中在标准化和验证PCD中心使用的一组测试(包括关键临床特征评估、鼻一氧化氮测量、纤毛超结构分析和PCD基因检测),以准确诊断PCD。北美和欧洲的多中心PCD研究项目对PCD基因的发现至关重要,促进了我们对PCD自然历史的理解,并开展了多中心临床试验。
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引用次数: 44
Novel Treatments for Polycystic Kidney Disease 多囊肾病的新治疗方法
Pub Date : 2019-01-01 DOI: 10.3233/TRD-190040
Ameya Patil, W. Sweeney, C. Pan, E. Avner
Polycystic kidney disease (PKD) and nephronophthisis are common manifestation of ciliopathies. PKD is the most common genetic renal condition; it affects 12.5 million people worldwide. PKD is a great example of decades of translational research leading to the discovery of novel treatments and significant number of clinical trials. This review will concentrate on the basic molecular and cellular pathophysiology that led to the development of therapeutic targets for PKD.
多囊肾病和肾病是纤毛病的常见表现。PKD是最常见的遗传性肾脏疾病;它影响着全世界1250万人。PKD是几十年转化研究的一个很好的例子,导致了新治疗方法的发现和大量的临床试验。本文将集中讨论导致PKD治疗靶点发展的基本分子和细胞病理生理学。
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引用次数: 2
Using human urine-derived renal epithelial cells to model kidney disease in inherited ciliopathies 利用人尿源性肾上皮细胞模拟遗传性纤毛病肾病
Pub Date : 2019-01-01 DOI: 10.3233/TRD-190034
E. Molinari, J. Sayer
The extreme heterogeneity of renal ciliopathies warrants the use of personalised, patient-specific disease models. Kidney tubular epithelia are exposed to continuous passage of filtrate and viable renal tubular cells are excreted daily in the urine, representing a non-invasive source of patient primary material. These cells can be isolated, cultured and employed for a range of applications, from disease modelling to ex vivo drug testing.
肾纤毛病的极端异质性保证了个性化、患者特异性疾病模型的使用。肾小管上皮暴露于连续通过的滤液中,有活力的肾小管细胞每天随尿液排出,代表了患者原发物质的非侵入性来源。这些细胞可以被分离、培养并用于一系列应用,从疾病建模到离体药物测试。
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引用次数: 4
Conducting an investigator-initiated randomized double-blinded intervention trial in acute decompensation of inborn errors of metabolism: Lessons from the N-Carbamylglutamate Consortium. 开展一项由研究者发起的随机双盲干预试验,研究先天性代谢错误的急性失代偿:来自n -氨甲酰谷氨酸联盟的经验教训。
Pub Date : 2018-12-20 DOI: 10.3233/TRD-180031
Nicholas Ah Mew, Avital Cnaan, Robert McCarter, Henry Choi, Penny Glass, Katie Rice, Louis Scavo, Catherine W Gillespie, George A Diaz, Gerard T Berry, Derek Wong, Laura Konczal, Shawn E McCandless, Curtis R Coughlin Ii, James D Weisfeld-Adams, Can Ficicioglu, Mark Yudkoff, Gregory M Enns, Uta Lichter-Konecki, Renata Gallagher, Mendel Tuchman

Organic acidemias and urea cycle disorders are ultra-rare inborn errors of metabolism characterized by episodic acute decompensation, often associated with hyperammonemia, resulting in brain edema and encephalopathy. Retrospective reports and translational studies suggest that N-carbamylglutamate (NCG) may be effective in reducing ammonia levels during acute decompensation in two organic acidemias, propionic and methylmalonic acidemia (PA and MMA), and in two urea cycle disorders, carbamylphosphate synthetase 1 and ornithine transcarbamylase deficiency (CPSD and OTCD). We established the 9-site N-carbamylglutamate Consortium (NCGC) in order to conduct two randomized double-blind, placebo-controlled trials of NCG in acute hyperammonemia of PA, MMA, CPSD and OTCD. Conducting clinical trials is challenging in any disease, but poses unique barriers and risks in the ultra-rare disorders. As the number of clinical trials in orphan diseases increases, evaluating the successes and opportunities for improvement in such trials is essential. We summarize herein the design, methods, experiences, challenges and lessons from the NCGC-conducted trials.

有机酸血症和尿素循环障碍是极其罕见的先天性代谢错误,其特征是偶发性急性代偿失代偿,通常伴有高氨血症,导致脑水肿和脑病。回顾性报告和转化研究表明,n -氨甲酰谷氨酸(NCG)可能在两种有机酸血症(丙酸和甲基丙二酸血症(PA和MMA))和两种尿素循环障碍(氨甲酰磷酸合成酶1和鸟氨酸转氨基甲酰基酶缺乏症(CPSD和OTCD))急性失代偿期间有效降低氨水平。我们建立了9位点n -氨甲酰谷氨酸联盟(NCGC),目的是开展NCG治疗PA、MMA、CPSD和OTCD急性高氨血症的两项随机、双盲、安慰剂对照试验。在任何疾病中进行临床试验都是具有挑战性的,但在超罕见疾病中却存在独特的障碍和风险。随着孤儿病临床试验数量的增加,评估这些试验的成功和改进机会至关重要。本文总结了ncgc试验的设计、方法、经验、挑战和教训。
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引用次数: 5
Regenerative Medicine Therapies for Rare Diseases. 罕见病再生医学治疗。
Pub Date : 2018-12-20 DOI: 10.3233/TRD-180030
Larissa Lapteva, Ramjay Vatsan, Tejashri Purohit-Sheth

The field of regenerative medicine is growing rapidly with the introduction of new therapies that have the potential to treat and cure serious medical conditions, including rare diseases, for which there are no available treatments. In the United States, the development of novel medical products is regulated and guided by the Food and Drug Administration (FDA). As scientific and technological advances are discovered and adopted by the medical industrial enterprise, the FDA's implementation of policies that create a climate conducive to safe development and rapid availability of novel medical products is one of the pillars which support the Agency's mission of protecting and promoting the public health. With advancements in cell modifications and tissue engineering, innovative creation of biomaterials, adoption of three-dimensional bioprinting, and rapid development of human genome editing technologies, the need for Agency's work in ensuring that its science-based policies remain relevant and helpful in facilitating the availability of new treatments to the most vulnerable populations of patients becomes more pressing than ever before. In December 2016, Congress amended section 506 of the Food, Drug, and Cosmetic (FD&C) Act [21 U.S.C. 356] by adding a new section 506(g), which defines the categories of products considered to be regenerative medicine therapies. As further described by FDA [1], regenerative medicine therapies are considered to include cell therapies, therapeutic tissue engineering products, human cell and tissue products, and combination products using any such therapies, as well as gene therapies, including genetically modified cells that lead to a durable modification of cells or tissues. The development and approval of regenerative medicine therapies are regulated by FDA's Office of Tissues and Advanced Therapies (OTAT) in the Center for Biologics Evaluation and Research (CBER). In this review article, we present practical considerations for investigating regenerative medicine therapies intended for the treatment of rare diseases. The material presented may be useful to researchers who are undertaking the challenging task of finding and delivering new treatments for those in need.

随着新疗法的引入,再生医学领域正在迅速发展,这些疗法有可能治疗和治愈严重的疾病,包括罕见病,但目前还没有可用的治疗方法。在美国,新型医疗产品的开发受到美国食品药品监督管理局(FDA)的监管和指导。随着医疗工业企业发现和采用科学技术进步,美国食品药品监督管理局实施的政策创造了一种有利于安全开发和快速获得新型医疗产品的环境,这是支持该局保护和促进公众健康使命的支柱之一。随着细胞修饰和组织工程的进步,生物材料的创新创造,三维生物打印的采用,以及人类基因组编辑技术的快速发展,原子能机构的工作需要确保其基于科学的政策保持相关性,并有助于为最脆弱的患者群体提供新的治疗,这比以往任何时候都更加紧迫。2016年12月,国会修订了《食品、药品和化妆品法》第506节【《美国法典》第21卷第356节】,增加了新的第506(g)节,该节定义了被视为再生医学疗法的产品类别。正如美国食品药品监督管理局[1]进一步描述的那样,再生医学疗法被认为包括细胞疗法、治疗性组织工程产品、人类细胞和组织产品、使用任何此类疗法的组合产品,以及基因疗法,包括导致细胞或组织持久修饰的转基因细胞。再生医学疗法的开发和批准由美国食品药品监督管理局生物制品评估与研究中心的组织和高级治疗办公室(OTAT)监管。在这篇综述文章中,我们提出了研究用于治疗罕见病的再生医学疗法的实际考虑。所提供的材料可能对正在承担为有需要的人寻找和提供新治疗方法这一具有挑战性任务的研究人员有用。
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引用次数: 0
Translational research advances a new era of prenatal diagnosis and newborn screening 转化研究开创了产前诊断和新生儿筛查的新时代
Pub Date : 2018-06-30 DOI: 10.3233/TRD-180023
L. Shulman, P. Farrell
This article provides a review of selected metabolic disorders resulting from genetic mutations and the methods used to identify them prenatally or facilitate diagnosis in the early neonatal period. Prenatal and neonatal diagnostic technologies have expanded and improved dramatically in the 21st century, as is their application in population-based screening and/or targeted assessment of at-risk couples. For instance, preimplantation genetic diagnosis has been a major advance. Emphasis herein has been placed on prototype diseases such as phenylketonuria, cystic fibrosis, and Tay-Sachs that have stimulated seminal efforts to improve medical practices in these fields. As more molecular strategies evolve, future developments in prenatal screening and diagnosis, along with newborn screening expansion, seem likely to continue rapid translation to the bedside.
本文综述了由基因突变引起的某些代谢紊乱,以及用于产前识别或促进新生儿早期诊断的方法。产前和新生儿诊断技术在21世纪得到了极大的扩展和改进,在基于人群的筛查和/或有针对性的高危夫妇评估中的应用也是如此。例如,植入前基因诊断是一个重大进展。本文强调了苯丙酮尿症、囊性纤维化和Tay-Sachs等原型疾病,这些疾病激发了改善这些领域医疗实践的开创性努力。随着更多分子策略的发展,产前筛查和诊断的未来发展,以及新生儿筛查的扩大,似乎有可能继续快速转化为床边筛查。
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引用次数: 2
期刊
Translational science of rare diseases
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