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Molecular cloning of the xylL-xylE region from the P. putida TOL plasmid, pDK1. p.p . putida TOL质粒pDK1中xyyl - xyle区的分子克隆
J A Voss, H Khedairy, R F Baker, R C Benjamin

A 5.2 kilobase EcoRI restriction fragment from the Pseudomonas putida HS1 TOL plasmid pDK1, encoding a portion of the lower toluene degradation pathway, was cloned into the E. coli plasmid pBR325. A detailed map of the restriction endonuclease sites was constructed and the nucleotide sequence of three contiguous XhoI fragments, with a combined total length of approximately 3.9 kilobases, has been investigated. This region was determined to contain a total of four separate open reading frames, each preceded by an identical putative ribosome-binding site (nucleotide sequence of 5'-GAGGTG-3'). These open reading frames have been tentatively identified as encoding the lower pathway enzymes catechol 2,3-dioxygenase (C23O) and 1,2-dihydroxycyclohexa-3,5-diene carboxylate dehydrogenase (DHCDH) and a subunit of the toluate 1,2-dioxygenase complex (TO).

从恶臭假单胞菌HS1 TOL质粒pDK1中克隆出一个编码低甲苯降解途径的5.2千碱基EcoRI限制性内切片段,并将其克隆到大肠杆菌质粒pBR325中。构建了限制性内切酶位点的详细图谱,并对三个连续的总长度约为3.9千碱基的XhoI片段的核苷酸序列进行了研究。该区域共包含四个独立的开放阅读框,每个阅读框之前都有一个相同的假定核糖体结合位点(5'-GAGGTG-3'的核苷酸序列)。这些开放阅读框已被初步鉴定为编码较低途径酶儿茶酚2,3-双加氧酶(C23O)和1,2-二羟基环己-3,5-二烯羧酸脱氢酶(DHCDH)和甲苯1,2-双加氧酶复合物(TO)的一个亚基。
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引用次数: 0
DNA sequence analysis of an abl-related gene in the blow fly, Calliphora erythrocephala. 红头苍蝇abl相关基因的DNA序列分析。
D S Durica, C E Robinson, R B Voelker

The Ceabl locus is a member of a small family of abl-related sequences in C. erythrocephala. The catalytic, SH2 and SH3 domains of the Ceabl-encoded protein show greater than 75% sequence identity to vertebrate abl protein tyrosine kinases and greater than 95% identity to the D. melanogaster abl polypeptide. Ceabl diverges from the vertebrate proteins, however, at the extreme amino terminus, near the beginning of the vertebrate abl exon involved in differential splicing. The carboxyl region shows no detectable similarity to the vertebrate abl proteins, while identity to Drosophila abl falls to 55%. Regions conserved between the two dipteran genes revealed no strong similarities to other proteins in the Genbank and EMBL databases.

Ceabl位点是C. erythrocephala中与abl相关的一个小家族的成员。ceabl编码蛋白的催化结构域、SH2和SH3结构域与脊椎动物abl蛋白酪氨酸激酶的序列一致性大于75%,与D. melanogaster abl多肽的序列一致性大于95%。然而,Ceabl与脊椎动物蛋白在极端的氨基末端,靠近脊椎动物abl外显子的开始处,与差异剪接有关。羧基区域与脊椎动物abl蛋白没有可检测到的相似性,而与果蝇abl的相似性则下降到55%。这两个双翅目基因之间的保守区域与Genbank和EMBL数据库中的其他蛋白质没有很强的相似性。
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引用次数: 0
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SAAS bulletin, biochemistry and biotechnology
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