Pub Date : 2002-01-01DOI: 10.1016/S0097-8485(01)00090-0
J. A. Poce-Fatou, R. Bañares-Alcántara, Joaquín Martín
{"title":"Theoretical Study of the Morphologically Originated Noise Associated with the Transmittance of a Precipitation System","authors":"J. A. Poce-Fatou, R. Bañares-Alcántara, Joaquín Martín","doi":"10.1016/S0097-8485(01)00090-0","DOIUrl":"https://doi.org/10.1016/S0097-8485(01)00090-0","url":null,"abstract":"","PeriodicalId":79331,"journal":{"name":"Computers & chemistry","volume":"77 1","pages":"131-40"},"PeriodicalIF":0.0,"publicationDate":"2002-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"83903422","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2002-01-01DOI: 10.1016/S0097-8485(01)00091-2
Weixiang Zhao, Dezhao Chen, Shangxu Hu
A differential fraction-based kinetic model (DFKM) was proposed to simulate the reaction process in view of the extremely large number of compounds in the petroleum fraction. The results of the simulation experiment on the hydrodesulfurization (HDS) process demonstrated that without considering the exact compounds, DFKM can depict the reaction processes not only of the whole petroleum fraction but of any narrow cut we are interested in. Apparently, this kind of ability, which can be considered as the ‘zoom in/out’ function, is very useful for the further study on the processing techniques of the petroleum fraction. In the meantime, different methods for obtaining the functions needed in DFKM were investigated and satisfactory results were presented.
{"title":"Differential fraction-based kinetic model for simulating hydrodesulfurization process of petroleum fraction","authors":"Weixiang Zhao, Dezhao Chen, Shangxu Hu","doi":"10.1016/S0097-8485(01)00091-2","DOIUrl":"https://doi.org/10.1016/S0097-8485(01)00091-2","url":null,"abstract":"<div><p>A differential fraction-based kinetic model (DFKM) was proposed to simulate the reaction process in view of the extremely large number of compounds in the petroleum fraction. The results of the simulation experiment on the hydrodesulfurization (HDS) process demonstrated that without considering the exact compounds, DFKM can depict the reaction processes not only of the whole petroleum fraction but of any narrow cut we are interested in. Apparently, this kind of ability, which can be considered as the ‘zoom in/out’ function, is very useful for the further study on the processing techniques of the petroleum fraction. In the meantime, different methods for obtaining the functions needed in DFKM were investigated and satisfactory results were presented.</p></div>","PeriodicalId":79331,"journal":{"name":"Computers & chemistry","volume":"26 2","pages":"Pages 141-148"},"PeriodicalIF":0.0,"publicationDate":"2002-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1016/S0097-8485(01)00091-2","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"91666156","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
A new approach for estimating the chemical rank of the three-way array called the principal norm vector orthogonal projection method has been proposed. The method is based on the fact that the chemical rank of the three-way data array is equal to one of the column space of the unfolded matrix along the spectral or chromatographic mode. A vector with maximum Frobenius norm is selected among all the column vectors of the unfolded matrix as the principal norm vector (PNV). A transformation is conducted for the column vectors with an orthogonal projection matrix formulated by PNV. The mathematical rank of the column space of the residual matrix thus obtained should decrease by one. Such orthogonal projection is carried out repeatedly till the contribution of chemical species to the signal data is all deleted. At this time the decrease of the mathematical rank would equal that of the chemical rank, and the remaining residual subspace would entirely be due to the noise contribution. The chemical rank can be estimated easily by using an F-test. The method has been used successfully to the simulated HPLC-DAD type three-way data array and two real excitation–emission fluorescence data sets of amino acid mixtures and dye mixtures. The simulation with added relatively high level noise shows that the method is robust in resisting the heteroscedastic noise. The proposed algorithrn is simple and easy to program with quite light computational burden.
{"title":"Estimation of the chemical rank for the three-way data: a principal norm vector orthogonal projection approach","authors":"Xie Hong-Ping , Jiang Jian-Hui , Shen Guo-Li , Yu Ru-Qin","doi":"10.1016/S0097-8485(01)00110-3","DOIUrl":"10.1016/S0097-8485(01)00110-3","url":null,"abstract":"<div><p>A new approach for estimating the chemical rank of the three-way array called the principal norm vector orthogonal projection method has been proposed. The method is based on the fact that the chemical rank of the three-way data array is equal to one of the column space of the unfolded matrix along the spectral or chromatographic mode. A vector with maximum Frobenius norm is selected among all the column vectors of the unfolded matrix as the principal norm vector (PNV). A transformation is conducted for the column vectors with an orthogonal projection matrix formulated by PNV. The mathematical rank of the column space of the residual matrix thus obtained should decrease by one. Such orthogonal projection is carried out repeatedly till the contribution of chemical species to the signal data is all deleted. At this time the decrease of the mathematical rank would equal that of the chemical rank, and the remaining residual subspace would entirely be due to the noise contribution. The chemical rank can be estimated easily by using an <em>F</em>-test. The method has been used successfully to the simulated HPLC-DAD type three-way data array and two real excitation–emission fluorescence data sets of amino acid mixtures and dye mixtures. The simulation with added relatively high level noise shows that the method is robust in resisting the heteroscedastic noise. The proposed algorithrn is simple and easy to program with quite light computational burden.</p></div>","PeriodicalId":79331,"journal":{"name":"Computers & chemistry","volume":"26 2","pages":"Pages 183-190"},"PeriodicalIF":0.0,"publicationDate":"2002-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1016/S0097-8485(01)00110-3","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"56174733","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2002-01-01DOI: 10.1016/S0097-8485(01)00086-9
D Britz , O Østerby , J Strutwolf , T Koch Svennesen
The application of fourth-order finite difference discretisations of the second derivative of concentration with respect to distance from the electrode, in electrochemical digital simulations, is examined further. In the bulk of the diffusion space, a central 5-point scheme is used, and 6-point asymmetric schemes are used at the edges. In this paper, four Runge–Kutta schemes have been used for the time integration. The observed efficiencies, for the Cottrell experiment and chronopotentiometry, are satisfactory, going beyond those for the 3-point scheme. However, it is third-order Runge–Kutta, rather than the fourth-order scheme, which is the most efficient, the two resulting in practically the same errors. This is probably due to the computational procedure where a constant ratio of δt/h2 was used.
{"title":"High-order spatial discretisations in electrochemical digital simulation. Part 3. Combination with the explicit Runge–Kutta algorithm","authors":"D Britz , O Østerby , J Strutwolf , T Koch Svennesen","doi":"10.1016/S0097-8485(01)00086-9","DOIUrl":"https://doi.org/10.1016/S0097-8485(01)00086-9","url":null,"abstract":"<div><p>The application of fourth-order finite difference discretisations of the second derivative of concentration with respect to distance from the electrode, in electrochemical digital simulations, is examined further. In the bulk of the diffusion space, a central 5-point scheme is used, and 6-point asymmetric schemes are used at the edges. In this paper, four Runge–Kutta schemes have been used for the time integration. The observed efficiencies, for the Cottrell experiment and chronopotentiometry, are satisfactory, going beyond those for the 3-point scheme. However, it is third-order Runge–Kutta, rather than the fourth-order scheme, which is the most efficient, the two resulting in practically the same errors. This is probably due to the computational procedure where a constant ratio of δ<em>t</em>/<em>h</em><sup>2</sup> was used.</p></div>","PeriodicalId":79331,"journal":{"name":"Computers & chemistry","volume":"26 2","pages":"Pages 97-103"},"PeriodicalIF":0.0,"publicationDate":"2002-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1016/S0097-8485(01)00086-9","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"91666159","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2002-01-01DOI: 10.1016/S0097-8485(01)00093-6
Xiaojun Yao , Xiaoyun Zhang , Ruisheng Zhang , Mancang Liu , Zhide Hu , Botao Fan
The Quantitative Structure–Property Relationship (QSPR) method is used to develop the correlation between structures of a great number of substituted benzenes and their critical pressure. Molecular descriptors calculated from structure alone were used to represent molecular structures. A subset of the calculated descriptors selected using forward stepwise regression was used in the QSPR model development. Multiple Linear Regression and Radial Basis Function Neural Networks are utilized to construct the linear and non-linear prediction model, respectively. To obtain good prediction ability, both topological structure and training parameters of radial basis function neural networks are optimized. The prediction result agrees well with the experimental value of these properties.
{"title":"Radial basis function neural network based QSPR for the prediction of critical pressures of substituted benzenes","authors":"Xiaojun Yao , Xiaoyun Zhang , Ruisheng Zhang , Mancang Liu , Zhide Hu , Botao Fan","doi":"10.1016/S0097-8485(01)00093-6","DOIUrl":"https://doi.org/10.1016/S0097-8485(01)00093-6","url":null,"abstract":"<div><p>The Quantitative Structure–Property Relationship (QSPR) method is used to develop the correlation between structures of a great number of substituted benzenes and their critical pressure. Molecular descriptors calculated from structure alone were used to represent molecular structures. A subset of the calculated descriptors selected using forward stepwise regression was used in the QSPR model development. Multiple Linear Regression and Radial Basis Function Neural Networks are utilized to construct the linear and non-linear prediction model, respectively. To obtain good prediction ability, both topological structure and training parameters of radial basis function neural networks are optimized. The prediction result agrees well with the experimental value of these properties.</p></div>","PeriodicalId":79331,"journal":{"name":"Computers & chemistry","volume":"26 2","pages":"Pages 159-169"},"PeriodicalIF":0.0,"publicationDate":"2002-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1016/S0097-8485(01)00093-6","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"91666153","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2002-01-01DOI: 10.1016/S0097-8485(01)00085-7
A. Konguetsof, T.E. Simos
A P-stable method of algebraic order eight for the approximate numerical integration of the Schrödinger equation is developed in this paper. Since the method is P-stable (i.e. its interval of periodicity is equal to (0, ∞)), large step sizes for the numerical integration can be used. Based on this new method and on a sixth algebraic order P-stable method developed by Simos (Phys. Scripta 55 (1997) 644–650), a new variable step method is obtained. Numerical results presented for the phase-shift problem of the radial Schrödinger equation and for the coupled differential equations arising from the Schrödinger equation show the efficiency of the developed method.
{"title":"P-stable eighth algebraic order methods for the numerical solution of the Schrödinger equation","authors":"A. Konguetsof, T.E. Simos","doi":"10.1016/S0097-8485(01)00085-7","DOIUrl":"https://doi.org/10.1016/S0097-8485(01)00085-7","url":null,"abstract":"<div><p>A P-stable method of algebraic order eight for the approximate numerical integration of the Schrödinger equation is developed in this paper. Since the method is P-stable (i.e. its interval of periodicity is equal to (0, ∞)), large step sizes for the numerical integration can be used. Based on this new method and on a sixth algebraic order P-stable method developed by Simos (Phys. Scripta 55 (1997) 644–650), a new variable step method is obtained. Numerical results presented for the phase-shift problem of the radial Schrödinger equation and for the coupled differential equations arising from the Schrödinger equation show the efficiency of the developed method.</p></div>","PeriodicalId":79331,"journal":{"name":"Computers & chemistry","volume":"26 2","pages":"Pages 105-111"},"PeriodicalIF":0.0,"publicationDate":"2002-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1016/S0097-8485(01)00085-7","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"91666158","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2002-01-01DOI: 10.1016/S0097-8485(01)00093-6
X. Yao, Xiaoyun Zhang, Ruisheng Zhang, Mancang Liu, Zhide Hu, B. Fan
{"title":"Radial Basis Function Neural Network Based QSPR for the Prediction of Critical Pressures of Substituted Benzenes","authors":"X. Yao, Xiaoyun Zhang, Ruisheng Zhang, Mancang Liu, Zhide Hu, B. Fan","doi":"10.1016/S0097-8485(01)00093-6","DOIUrl":"https://doi.org/10.1016/S0097-8485(01)00093-6","url":null,"abstract":"","PeriodicalId":79331,"journal":{"name":"Computers & chemistry","volume":"26 2 1","pages":"159-69"},"PeriodicalIF":0.0,"publicationDate":"2002-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"82395594","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2002-01-01DOI: 10.1016/S0097-8485(01)00086-9
D. Britz, O. Østerby, J. Strutwolf, Tom Koch Svennesen
{"title":"High-order Spatial Discretisations in Electrochemical Digital Simulation. Part 3. Combination with the Explicit Runge-Kutta Algorithm","authors":"D. Britz, O. Østerby, J. Strutwolf, Tom Koch Svennesen","doi":"10.1016/S0097-8485(01)00086-9","DOIUrl":"https://doi.org/10.1016/S0097-8485(01)00086-9","url":null,"abstract":"","PeriodicalId":79331,"journal":{"name":"Computers & chemistry","volume":"11 1","pages":"97-103"},"PeriodicalIF":0.0,"publicationDate":"2002-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"87236419","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2002-01-01DOI: 10.1016/S0097-8485(01)00105-X
P.C Chen, S.C Chen
The molecular geometries and internal rotational barriers of the nitro group of 3-nitrotoluene (3-NT), 4-nitrotoluene (4-NT), 3-nitrophenol (3-NP), 4-nitrophenol (4-NP), 3-nitroaniline (3-NA), and 4-nitroaniline (4-NA) were calculated by five different types of density functional theory (DFT) methods with three different levels of basis sets. Analyses of the torsional angles of the nitro, methyl, amino, and hydroxyl groups indicate that 3-NP, and 4-NP are planar molecules, but 3-NT, 4-NT, 3-NA, and 4-NA are not planar molecules. Internal rotational barriers of the nitro group were calculated as the V2 barrier, and the NO2 torsional potentials for each molecule were given. The heights of the V2 barrier vary with the DFT methods, the basis sets, and the kinds and positions of substituents. The average values of the V2 barriers for 3-NT, 4-NT, 3-NP, 4-NP, 3-NA, and 4-NA are 6.44, 6.92, 6.64, 7.93, 6.38, and 9.13 kcal/mol, respectively. Torsional potentials of the OH and NH2 groups of nitrophenol and nitroaniline derivatives were also studied by a B3LYP/6-31G* approach. Except for the OH group in 2-NP, these derivatives have the V2 barrier.
{"title":"Theoretical study of the internal rotational barriers in nitrotoluenes, nitrophenols, and nitroanilines","authors":"P.C Chen, S.C Chen","doi":"10.1016/S0097-8485(01)00105-X","DOIUrl":"https://doi.org/10.1016/S0097-8485(01)00105-X","url":null,"abstract":"<div><p>The molecular geometries and internal rotational barriers of the nitro group of 3-nitrotoluene (3-NT), 4-nitrotoluene (4-NT), 3-nitrophenol (3-NP), 4-nitrophenol (4-NP), 3-nitroaniline (3-NA), and 4-nitroaniline (4-NA) were calculated by five different types of density functional theory (DFT) methods with three different levels of basis sets. Analyses of the torsional angles of the nitro, methyl, amino, and hydroxyl groups indicate that 3-NP, and 4-NP are planar molecules, but 3-NT, 4-NT, 3-NA, and 4-NA are not planar molecules. Internal rotational barriers of the nitro group were calculated as the V<sub>2</sub> barrier, and the NO<sub>2</sub> torsional potentials for each molecule were given. The heights of the V<sub>2</sub> barrier vary with the DFT methods, the basis sets, and the kinds and positions of substituents. The average values of the V<sub>2</sub> barriers for 3-NT, 4-NT, 3-NP, 4-NP, 3-NA, and 4-NA are 6.44, 6.92, 6.64, 7.93, 6.38, and 9.13 kcal/mol, respectively. Torsional potentials of the OH and NH<sub>2</sub> groups of nitrophenol and nitroaniline derivatives were also studied by a B3LYP/6-31G* approach. Except for the OH group in 2-NP, these derivatives have the V<sub>2</sub> barrier.</p></div>","PeriodicalId":79331,"journal":{"name":"Computers & chemistry","volume":"26 2","pages":"Pages 171-178"},"PeriodicalIF":0.0,"publicationDate":"2002-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1016/S0097-8485(01)00105-X","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"91666154","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}