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Methanobrevibacter smithii activates immune microenvironment of intestinum tenue in a mouse model. 史密斯甲烷预菌激活小鼠肠道免疫微环境模型。
IF 2.6 3区 生物学 Q3 MICROBIOLOGY Pub Date : 2026-02-19 DOI: 10.1007/s00203-026-04772-2
Mengli Jin, Jiandong Hu, Chong Tian, Huancheng Wu, Bo Wang, Yupeng Wang, Xueling Yang, Chunhua Ma, Fenge Li

In this investigation, we systematically evaluated the immunomodulatory mechanisms of Methanobrevibacter smithii within the intestinal mucosal immune system using a murine oral gavage model. Flow cytometric analysis revealed that M. smithii administration significantly augmented TNF-α, IL-22, and IL-17 production in three key lymphocyte populations: group 3 innate lymphoid cells (ILC3s), CD4 + T cells, and CD8 + T cells. Notably, while the frequency of CD4 + T cells exhibited a reduction in the treatment cohort, CD8 + T cell proportions remained unchanged. Crucially, our comprehensive profiling demonstrated stable GM-CSF expression across all analyzed immune cell subsets. Although comparable activation patterns were observed in both ILC3s and T cell populations, multivariate analysis failed to identify linear correlations between their cytokine expression profiles. These findings demonstrate that Methanobrevibacter smithii actively modulates mucosal immunity through dual activation of innate (ILC3s) and adaptive (CD4+/CD8 + T cells) immune compartments, while highlighting the existence of non-redundant regulatory mechanisms within the intestinal immune ecosystem that merit further mechanistic exploration.

在这项研究中,我们采用小鼠灌胃模型系统地评估了史密斯甲烷杆菌在肠道黏膜免疫系统中的免疫调节机制。流式细胞分析显示,M. smithii管理显著增加TNF-α, IL-22和IL-17在三个关键淋巴细胞群:3组先天淋巴样细胞(ILC3s), CD4 + T细胞和CD8 + T细胞的产生。值得注意的是,虽然CD4 + T细胞的频率在治疗队列中表现出减少,但CD8 + T细胞的比例保持不变。至关重要的是,我们的综合分析表明,在所有分析的免疫细胞亚群中,GM-CSF的表达是稳定的。虽然在ILC3s和T细胞群中观察到类似的激活模式,但多变量分析未能确定它们的细胞因子表达谱之间的线性相关性。这些发现表明,史密斯甲烷杆菌通过双重激活先天(ILC3s)和适应性(CD4+/CD8 + T细胞)免疫区积极调节粘膜免疫,同时强调了肠道免疫生态系统中存在非冗余调节机制,值得进一步的机制探索。
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引用次数: 0
Studying organosulfonate metabolism in southern Russia chernozem soil microbial community: ubiquity of the desulfonation pathways and possible mixotrophy in common soil heterotrophs. 俄罗斯南部黑钙土微生物群落有机磺酸代谢研究:常见异养土壤中普遍存在的脱硫途径和可能的混合营养。
IF 2.6 3区 生物学 Q3 MICROBIOLOGY Pub Date : 2026-02-19 DOI: 10.1007/s00203-026-04741-9
Konstantin Demin, Kseniya Onasenko, Anastasiya Beletskaya, Anastasiya Tsoy, Margarita Boyko, Maksim Kulikov, Dariya Kulikova, Evgeniya Prazdnova
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引用次数: 0
Determinate the effects of Arabic gum and Lactobacillus acidophilus on the gut microbiota ALPK1/NFKB/NLRP6 and NLRP2 signaling pathway and virulence gene profile in rats with Campylobacter jejuni exosome application. 测定阿拉伯胶和嗜酸乳杆菌对空肠弯曲杆菌外泌体大鼠肠道菌群ALPK1/NFKB/NLRP6和NLRP2信号通路及毒力基因谱的影响
IF 2.6 3区 生物学 Q3 MICROBIOLOGY Pub Date : 2026-02-19 DOI: 10.1007/s00203-026-04732-w
Mahmut Ucar, Ozgur Celebi, Demet Celebi, Sumeyye Baser, Mustafa Can Guler, Ayhan Tanyeli, Metin Kiliclioglu, Bulent Dabanlioglu, Masma Shahbazova, Ahmet Yilmaz, Serkan Yildirim

Campylobacter jejuni (CJ), a major cause of bacterial gastroenteritis, employs exosomes to disseminate virulence factors and disrupt host immune homeostasis. This study investigated the therapeutic potential of Arabic Gum (AZ) and Lactobacillus acidophilus (LA), individually and in combination, against CJ exosome-induced intestinal injury in rats, with emphasis on inflammasome-related signaling and microbiota modulation. Rats received AZ, LA, or both following CJ exosome exposure. Molecular analyses, histopathology, and microbiome sequencing were performed to elucidate mechanistic responses. CJ exosomes activated key virulence pathways and triggered pronounced inflammatory signaling characterized by alpha kinase 1 (ALPK1), Nuclear Factor Kappa B (NF-κB), and NOD-like Receptor Pyrin (NLRP) upregulation, accompanied by epithelial injury and dysbiosis. Treatment with AZ or LA alone attenuated inflammasome activation and partially restored immune and microbial balance. Notably, the combined treatment produced a synergistic effect, effectively suppressing ALPK1/NF-κB/NLRP signaling and reestablishing a more physiologic microbial community structure. These improvements were associated with reductions in pro-inflammatory cytokines and markers of tissue damage, as well as substantial recovery in intestinal, hepatic, and splenic architecture. Overall, AZ and LA significantly mitigated CJ exosome-mediated pathology, with the combined therapy demonstrating superior efficacy. The findings suggest that co-administration of AZ and LA may offer a promising dual-modal strategy to counteract CJ-induced inflammatory and microbial disturbances, potentially supporting future therapeutic approaches targeting exosome-mediated pathogenesis.

空肠弯曲杆菌(CJ)是细菌性胃肠炎的主要病因,它利用外泌体传播毒力因子并破坏宿主免疫稳态。本研究探讨了阿拉伯胶(AZ)和嗜酸乳杆菌(LA)单独或联合对CJ外泌体诱导的大鼠肠道损伤的治疗潜力,重点研究了炎症小体相关信号传导和微生物群调节。大鼠在CJ外泌体暴露后分别接受AZ、LA或两者治疗。进行了分子分析、组织病理学和微生物组测序来阐明机制反应。CJ外泌体激活了关键的毒力通路,引发了以α激酶1 (ALPK1)、核因子κB (NF-κB)和nod样受体Pyrin (NLRP)上调为特征的明显炎症信号,并伴有上皮损伤和生态失调。单独用阿斯利康或洛西汀治疗可减轻炎性体的激活,部分恢复免疫和微生物平衡。值得注意的是,联合处理产生协同效应,有效抑制ALPK1/NF-κB/NLRP信号,重建更生理的微生物群落结构。这些改善与促炎细胞因子和组织损伤标志物的减少以及肠、肝和脾结构的实质性恢复有关。总的来说,AZ和LA显著减轻了CJ外泌体介导的病理,联合治疗显示出更好的疗效。研究结果表明,AZ和LA的联合使用可能提供了一种有希望的双模策略来对抗cj诱导的炎症和微生物紊乱,潜在地支持未来针对外泌体介导的发病机制的治疗方法。
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引用次数: 0
Molecular pathways in plant growth-promoting rhizobacteria-plant interactions: a comprehensive review. 促进植物生长的根瘤菌与植物相互作用的分子途径综述。
IF 2.6 3区 生物学 Q3 MICROBIOLOGY Pub Date : 2026-02-19 DOI: 10.1007/s00203-026-04749-1
Muhammad Faiq Irfan, Shazia Shafique, Sobiya Shafique, Bushra Tabassum, Allah Rakha Yaseen

Plant growth-promoting rhizobacteria (PGPR) enhance plant growth, nutrient uptake and tolerance to biotic and abiotic stress through diverse microbial traits and plant-associated responses. At the molecular level, PGPR influences plant physiology by modulating phytohormone balance, nutrient signaling, and defense-related pathways. This review summarizes current knowledge on bacterial traits involved in nitrogen fixation, phytohormone production and modulation, siderophore-mediated iron acquisition and induced systemic resistance with an emphasis on molecular components and regulatory frameworks that have been experimentally characterized. Key signaling elements including reactive oxygen species, calcium fluxes, mitogen-activated protein kinase cascades, and hormone-responsive transcriptional regulators such as NPR1, are highlighted as central nodes in PGPR-associated plant responses. Where direct molecular causality remains unresolved, plant phenotypes observed are presented as evidence-based associations, and remaining knowledge gaps are identified. By integrating molecular components with functional outcomes, this review provides a conceptual framework for understanding how microbial traits interface with plant signaling networks and identifies priorities for future mechanistic research.

促进植物生长的根瘤菌(PGPR)通过多种微生物性状和植物相关反应促进植物生长、营养吸收和对生物和非生物胁迫的耐受性。在分子水平上,PGPR通过调节植物激素平衡、营养信号和防御相关途径影响植物生理。本文综述了目前关于固氮、植物激素产生和调节、铁载体介导的铁获取和诱导系统抗性的细菌特性的知识,重点介绍了实验表征的分子成分和调控框架。关键的信号元件包括活性氧、钙通量、丝裂原激活的蛋白激酶级联和激素应答的转录调节因子,如NPR1,在pgpr相关的植物反应中被强调为中心节点。在直接的分子因果关系仍未解决的情况下,观察到的植物表型被呈现为基于证据的关联,并确定了剩余的知识空白。通过将分子成分与功能结果相结合,本综述为理解微生物性状如何与植物信号网络相结合提供了一个概念框架,并确定了未来机制研究的重点。
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引用次数: 0
Resource recovery from low-rank coal and livestock manure for sustainable agroecosystems: a review. 低阶煤和畜禽粪便资源回收与可持续农业生态系统研究进展
IF 2.6 3区 生物学 Q3 MICROBIOLOGY Pub Date : 2026-02-19 DOI: 10.1007/s00203-026-04758-0
Damir Nussipov, Nuraly Akimbekov, Kuanysh Tastambek, Ilya Digel, Alan Aimagambetov, Liu Xiangrong, Wang Yaya, Lila Ackley, Gaisha Zhailauova

The mining and combustion of low-rank coal (LRC), in conjunction with the inadequate management of agricultural waste, notably cattle manure, constitutes a substantial environmental challenge, encompassing greenhouse gas (GHG) emissions and resource inefficiency. However, the co-utilization of these materials offers opportunities for sustainable waste valorization. This review identifies critical knowledge gaps and evaluates recent advances in the combination of LRC and manure for co-composting and bioresource recovery. The findings from the literature review suggest that microbial biodegradation and surfactant-assisted treatments can enhance the transformation of LRC into humic substances, whereas anaerobic digestion and composting can reduce methane emissions from manure. The co-composting of LRC and manure has been identified as a promising pathway to improve soil fertility and carbon sequestration, while mitigating GHG emissions. The present review aims to evaluate microbial, surfactant-assisted, and co-composting strategies for LRC and manure management, with emphasis on agricultural sustainability and climate mitigation. Nevertheless, challenges remain regarding process optimisation, scalability, and economic feasibility. The review concludes with a series of recommendations for future research aimed at integrating these biotechnologies into circular agricultural-energy systems.

低阶煤的开采和燃烧,加上农业废物特别是牛粪管理不当,构成了一个重大的环境挑战,包括温室气体排放和资源效率低下。然而,这些材料的共同利用为可持续的废物增值提供了机会。本综述确定了关键的知识空白,并评估了LRC和粪肥结合用于共同堆肥和生物资源回收的最新进展。文献综述的结果表明,微生物生物降解和表面活性剂辅助处理可以促进LRC向腐殖质质的转化,而厌氧消化和堆肥可以减少粪便中的甲烷排放。LRC和粪肥的共堆肥已被确定为改善土壤肥力和碳固存,同时减少温室气体排放的有希望的途径。本综述旨在评估微生物、表面活性剂辅助和共同堆肥策略对LRC和粪肥管理的影响,重点是农业可持续性和气候减缓。然而,在工艺优化、可扩展性和经济可行性方面仍然存在挑战。这篇综述最后提出了一系列旨在将这些生物技术纳入循环农业能源系统的未来研究建议。
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引用次数: 0
Malassezia isolated from patients with PV exhibits resistance features supporting its pathogenic nature. 从PV患者中分离的马拉色菌显示出支持其致病性的耐药性特征。
IF 2.6 3区 生物学 Q3 MICROBIOLOGY Pub Date : 2026-02-19 DOI: 10.1007/s00203-026-04764-2
Bharati Naik, Jayaprakash Sasikumar, Manjunath Shenoy, Shankar Prasad Das

Malassezia is a lipophilic yeast and a major commensal associated with the human skin and gut. It is responsible for several dermatological conditions and has been associated with human diseases, including certain cancers, yet the factors that trigger pathogenicity in this otherwise benign yeast remain poorly defined. Out of the 21 species of Malassezia that have been identified, 14 are associated with humans. In this study, we investigated how clinical strains of Malassezia furfur differ from the standard laboratory strain in terms of pathogenicity-associated elements and resistance features. In this study, we examined 58 pityriasis versicolor (PV) cases, presented with multiple hyperpigmented scaly macules over different parts of the body. From those infected lesions, skin scrapings were isolated and grown on lipid-rich media. We examined M. furfur strains isolated from PV patients and shortlisted six strains exhibiting pronounced pathogenic characteristics compared against the standard strain (MTCC1374/CBS1878). A comprehensive analysis was performed to assess growth kinetics, biofilm-forming capacity, lipase production, and tolerance to temperature, pH, and salinity. Our results indicate that the clinical variants of M. furfur reveal altered features, including increased biofilm formation, increased lipase production, and the ability to withstand several key parameters like pH, salinity, and temperature, which are indicative of their ability to withstand harsh environmental conditions. These characteristics represent clear signatures of increased pathogenic potential compared to the standard strain that collectively reflect an enhanced ability to withstand the fluctuating microenvironment of the human skin. The emergence of resistance-like features among clinical isolates may explain persistent colonisation and relapse frequently observed in PV and other Malassezia-associated disorders. This work highlights the importance of understanding how a common commensal yeast evolves virulence and resistance features, which may contribute to recurrent infections and confer therapeutic challenges.

马拉色菌是一种亲脂酵母菌,是与人类皮肤和肠道相关的主要共生菌。它是几种皮肤病的罪魁祸首,并与人类疾病有关,包括某些癌症,但在这种良性酵母菌中引发致病性的因素仍不清楚。在已查明的21种马拉色菌中,有14种与人类有关。在这项研究中,我们调查了马拉色菌的临床菌株与标准实验室菌株在致病性相关因素和耐药特征方面的差异。在这项研究中,我们检查了58例花斑糠疹(PV)病例,这些病例在身体的不同部位表现为多个色素沉着的鳞状斑点。从这些感染病变中分离出皮肤屑,并在富脂培养基上培养。我们检测了从PV患者中分离的毛分枝杆菌菌株,并筛选出6株与标准菌株(MTCC1374/CBS1878)相比具有明显致病特征的菌株。对生长动力学、生物膜形成能力、脂肪酶产量以及对温度、pH和盐度的耐受性进行了综合分析。我们的研究结果表明,皮草分枝杆菌的临床变异显示出改变的特征,包括增加的生物膜形成,增加的脂肪酶产量,以及承受pH、盐度和温度等几个关键参数的能力,这表明它们能够承受恶劣的环境条件。与标准菌株相比,这些特征代表了致病潜力增加的明显特征,共同反映了抵抗人类皮肤波动微环境的能力增强。临床分离株中出现的耐药样特征可以解释PV和其他马拉色菌相关疾病中经常观察到的持续定植和复发。这项工作强调了了解一种常见的共生酵母菌如何进化出毒力和耐药性特征的重要性,这可能导致复发性感染并赋予治疗挑战。
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引用次数: 0
Mutations in the mucA gene of Pseudomonas aeruginosa promote disease exacerbation. 铜绿假单胞菌mucA基因突变促进疾病恶化。
IF 2.6 3区 生物学 Q3 MICROBIOLOGY Pub Date : 2026-02-19 DOI: 10.1007/s00203-026-04761-5
Yi-Han Wang, Jiang-Yu Long, Wen-Bo Xu, Ke-Ming Ning, Si-Yu Meng, Wang-Si-Jiao Shen, Zhao-Ying Liu

The mucA gene is a major genetic determinant of mucoid conversion in Pseudomonas aeruginosa isolated from patients with cystic fibrosis (CF) and represents a frequent hotspot for adaptive mutations. Although the role of the mucA gene in pathogen adaptation and virulence has been progressively elucidated, a comprehensive and systematic synthesis of its emerging functions and regulatory networks remains lacking. Here, we summarize current advances in the study of mucA, including its evolutionary origin, structural and functional characteristics, regulatory role in alginate biosynthesis, its mutation-associated pathogenic effects, and emerging strategies to studying or targeting mucA-deficient strains. Overall, this review highlights mucA as an important component of stress response networks in P. aeruginosa and summarizes current evidence that may inform future studies on risk stratification in chronic infections.

mucA基因是囊性纤维化(CF)患者分离的铜绿假单胞菌粘液样转化的主要遗传决定因素,是适应性突变的一个频繁热点。尽管mucA基因在病原体适应和毒力中的作用已经逐渐被阐明,但对其新出现的功能和调控网络的全面和系统的综合仍然缺乏。本文综述了mucA的进化起源、结构和功能特征、在藻酸盐生物合成中的调控作用、突变相关的致病作用以及研究或靶向mucA缺陷菌株的新策略等方面的研究进展。总的来说,这篇综述强调了mucA是铜绿假单胞菌应激反应网络的重要组成部分,并总结了目前的证据,可能为未来慢性感染风险分层研究提供信息。
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引用次数: 0
Differential activation of NF-κB pathway by Escherichia coli and Bacteroides fragilis lipopolysaccharides affects blood-brain barrier permeability. 大肠杆菌和脆弱拟杆菌脂多糖对NF-κB通路的差异激活影响血脑屏障的通透性。
IF 2.6 3区 生物学 Q3 MICROBIOLOGY Pub Date : 2026-02-19 DOI: 10.1007/s00203-026-04720-0
Xiao Liu, Guangyu Ju, Xinyi Wang, Rao Liu, Qi Ding, Shuanghu Yuan, Junchao Qian

The blood-brain barrier (BBB) plays a crucial role in protecting the central nervous system (CNS) from harmful substances but poses challenges to the effective delivery of many therapeutic drugs. While the inflammatory effects of lipopolysaccharides (LPS) are documented, the combined effects of specific LPS types on BBB integrity require further investigation. This study investigates the distinct and combined impacts of LPS derived from Escherichia coli (EC) and Bacteroides fragilis (BF) on BBB integrity. A range of assays was employed, including Limulus amebocyte lysate (LAL) endotoxin detection, CCK-8 cell viability assays, transepithelial electrical resistance (TEER) measurement, FITC-Dextran permeability, immunofluorescence and Western blot analysis of NF-κB p65 and phosphorylated p65 (p-p65) nuclear translocation, tight junctions (TJs) proteins (ZO-1, claudin-5, occludin), inflammation cytokines (TNF-α, IL-6) and COX-2 levels by qPCR and ELISA, Rhodamine 123 (Rh123) efflux assays, and Evans Blue (EB) staining in mice to assess BBB permeability in vivo. The results showed that EC-LPS had higher endotoxin activity compared to BF-LPS (EU ratio of 4.7:1), and despite equal EU concentrations, EC-LPS induced a stronger inflammatory response and more significant BBB disruption. Notably, the co-treatment group (EC-LPS + BF-LPS) showed no synergistic effect on BBB permeability, with BF-LPS antagonizing the effect of EC-LPS. Further confirmation through TLR4 and NF-κB inhibitors revealed that this BBB permeability mechanism is TLR4 receptor and NF-κB pathway-dependent.

血脑屏障(BBB)在保护中枢神经系统(CNS)免受有害物质侵害方面起着至关重要的作用,但对许多治疗药物的有效递送提出了挑战。虽然脂多糖(LPS)的炎症作用已被证实,但特定类型的脂多糖对血脑屏障完整性的综合影响还需要进一步研究。本研究探讨了大肠杆菌(EC)和脆弱拟杆菌(BF)产生的LPS对血脑屏障完整性的不同和联合影响。采用一系列检测方法,包括鲎试剂(LAL)内毒素检测、CCK-8细胞活力测定、经皮电阻(TEER)测定、fitc -葡聚糖通透性测定、免疫荧光和Western blot分析NF-κB p65和磷酸化p65 (p-p65)核易位、紧密连接(TJs)蛋白(ZO-1、claudin-5、occludin)、炎症因子(TNF-α、IL-6)和COX-2水平(qPCR和ELISA)、罗丹明123 (Rh123)外排测定、和Evans Blue (EB)染色来评估血脑屏障的通透性。结果表明,与BF-LPS相比,EC-LPS具有更高的内毒素活性(EU比为4.7:1),尽管相同的EU浓度,EC-LPS诱导的炎症反应更强,血脑屏障破坏更明显。值得注意的是,联合治疗组(EC-LPS + BF-LPS)对血脑屏障通透性没有协同作用,而BF-LPS对EC-LPS有拮抗作用。通过TLR4和NF-κB抑制剂进一步证实,这种血脑屏障通透性机制依赖于TLR4受体和NF-κB通路。
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引用次数: 0
Xylooligosaccharide in combination with Lactobacillus rhamnosus ameliorates disturbed circadian rhythm and associated neurological internal desynchronization by maintaining homeostasis of neuroactive molecules and gut microbiome. 低聚木糖与鼠李糖乳杆菌联合使用可通过维持神经活性分子和肠道微生物群的稳态来改善紊乱的昼夜节律和相关的神经内部不同步。
IF 2.6 3区 生物学 Q3 MICROBIOLOGY Pub Date : 2026-02-19 DOI: 10.1007/s00203-026-04755-3
Rutuja Murlidhar Sonkar, Pravin Savata Gade, Praveena Bhatt
{"title":"Xylooligosaccharide in combination with Lactobacillus rhamnosus ameliorates disturbed circadian rhythm and associated neurological internal desynchronization by maintaining homeostasis of neuroactive molecules and gut microbiome.","authors":"Rutuja Murlidhar Sonkar, Pravin Savata Gade, Praveena Bhatt","doi":"10.1007/s00203-026-04755-3","DOIUrl":"https://doi.org/10.1007/s00203-026-04755-3","url":null,"abstract":"","PeriodicalId":8279,"journal":{"name":"Archives of Microbiology","volume":"208 4","pages":"208"},"PeriodicalIF":2.6,"publicationDate":"2026-02-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146225334","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Isolation and characterization of heavy metal-tolerant, plant growth-promoting bacteria and evaluation of the impact of lead [Pb(II)] on their functional traits. 植物耐重金属促生长细菌的分离、鉴定及铅对其功能性状的影响
IF 2.6 3区 生物学 Q3 MICROBIOLOGY Pub Date : 2026-02-19 DOI: 10.1007/s00203-026-04762-4
Aanand Kumar, Radha Rani
{"title":"Isolation and characterization of heavy metal-tolerant, plant growth-promoting bacteria and evaluation of the impact of lead [Pb(II)] on their functional traits.","authors":"Aanand Kumar, Radha Rani","doi":"10.1007/s00203-026-04762-4","DOIUrl":"https://doi.org/10.1007/s00203-026-04762-4","url":null,"abstract":"","PeriodicalId":8279,"journal":{"name":"Archives of Microbiology","volume":"208 4","pages":"206"},"PeriodicalIF":2.6,"publicationDate":"2026-02-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146225367","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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Archives of Microbiology
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