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The relationship between inflammatory biomarkers and macular pigment optical density in hypertensive patients: a cross-sectional study. 炎症生物标志物与高血压患者黄斑色素光密度之间的关系:一项横断面研究。
IF 0.6 4区 医学 Q4 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2023-10-09 eCollection Date: 2023-06-01 DOI: 10.2478/abm-2023-0054
Chunchuree Kongmeesuk Kaneko, Katsunori Kaneko, Vitoon Jularattanaporn, Thamthiwat Nararatwanchai

Background: Inflammation may be associated with macular pigment optical density (MPOD) degradation.

Objectives: The relationship between inflammation and MPOD is evaluated using inflammatory biomarkers, including high sensitivity C-reactive protein (hsCRP), lipid level and ratio, waist circumference (WC), and body mass index (BMI).

Method: In this cross-sectional design, 62 hypertensive patients were recruited between January 6 and January 8, 2022, at a primary care unit. The MPOD was measured using the Macular pigment screener II. Blood tests for hsCRP, lipid profile, WC measurement, BMI calculation, and completing a questionnaire were conducted, and statistical analysis was done by using Microsoft Excel 2019 and Stata version 16.1. Spearman's rank correlation test was used to evaluate correlations. Multivariate analysis for adjusting confounders was done by logistic regression.

Result: There was a significant negative correlation between hsCRP >3 and MPOD (r = -0.26, P = 0.04).

Conclusion: Inflammation was linked to MPOD. Anti-inflammatory agents may be beneficial in preventing MPOD degradation.

背景:炎症可能与黄斑色素光密度(MPOD)降解有关。目的:使用炎症生物标志物评估炎症与MPOD之间的关系,包括高敏C反应蛋白(hsCRP)、脂质水平和比率、腰围(WC)和体重指数(BMI)。MPOD是使用Macular颜料筛分器II测量的。进行了hsCRP、脂质概况、WC测量、BMI计算和填写问卷的血液测试,并使用Microsoft Excel 2019和Stata 16.1版进行了统计分析。Spearman秩相关检验用于评估相关性。通过逻辑回归进行多变量分析以调整混杂因素。结果:hsCRP>3与MPOD呈显著负相关(r=-0.26,P=0.04)。抗炎剂可能有利于防止MPOD降解。
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引用次数: 0
Infection rate among close contacts of patients with coronavirus disease in Japan: a descriptive study and literature review. 日本冠状病毒病患者密切接触者的感染率:一项描述性研究和文献综述。
IF 0.6 4区 医学 Q4 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2023-10-09 eCollection Date: 2023-06-01 DOI: 10.2478/abm-2023-0051
Osamu Yamamura, Hidenori Onishi, Ippei Sakamaki, Ryousuke Fujita, Hirofumi Miyashita, Hiromichi Iwasaki

Background: In Japan, on April 20, 2020, the definition of a close contact regarding coronavirus disease (COVID-19) was changed from a long-term contact time to a specified contact time of 15 min and from a contact distance of 2 m to 1 m.

Objectives: We aimed to determine the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) infection rate among close contacts of patients with COVID-19 and determine the impact of the infection on transmission among close contacts.

Methods: The numbers of SARS-CoV-2 tests, SARS-CoV-2-positive cases, and close contacts of patients with COVID-19 were assessed between March 2020 and February 2021 in Fukui Prefecture, Japan. The study period was subdivided into 3 periods. The second and third period contained data with the changed definition of close contact.

Results: Overall, 32,238 SARS-CoV-2 tests were performed. There were 545 patients with COVID-19 and 1487 close contacts, of whom 267 tested positive. The highest infection rate occurred in period 3. Distance, protective measures, and contact time with COVID-19 patients influenced the increased infection rate. The infection rate showed a rising trend from 11.1% in period 1 to 19.2% and 20.0% in periods 2 and 3, respectively (Cochran-Armitage test; P < 0.004). Multivariate analysis revealed that female sex was an independent risk factor for infection of close contacts (odds ratio: 2.23; 95% confidence interval: 1.700-2.930).

Conclusions: Female sex is a risk factor for transmission by close contacts. The rate of infection among close contacts may be associated with contact time, contact distance, and protective measures.

背景:在日本,2020年4月20日,关于冠状病毒疾病(新冠肺炎)的密切接触者的定义从长期接触时间改为15分钟的特定接触时间,从2米的接触距离改为1米。目的:我们旨在确定新冠肺炎患者密切接触者中严重急性呼吸综合征冠状病毒2(SARS-CoV-2)感染率,并确定密切接触者之间传播的感染。方法:对2020年3月至2021年2月期间日本福井县新冠肺炎患者的SARS-CoV-2检测、SARS-CoV-2阳性病例和密切接触者人数进行评估。研究期间分为3个阶段。第二个和第三个周期包含了密切接触定义发生变化的数据。结果:总共进行了32238次严重急性呼吸系统综合征冠状病毒2型检测。共有545名新冠肺炎患者和1487名密切接触者,其中267人检测呈阳性。感染率最高的发生在第3期。与新冠肺炎患者的距离、防护措施和接触时间影响了感染率的增加。感染率呈上升趋势,从第1期的11.1%分别上升到第2期和第3期的19.2%和20.0%(Cochran-Armitage检验;P<0.004)。多因素分析显示,女性是密切接触者感染的独立危险因素(比值比:2.23;95%置信区间:1.700-2.930)。结论:女性是通过密切接触者传播的危险因素。密切接触者的感染率可能与接触时间、接触距离和防护措施有关。
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引用次数: 1
Pharmacogenomics of response to statin treatment and susceptibility to statin-induced adverse drug reactions in Asians: a scoping review. 亚洲人对他汀类药物治疗的反应和他汀类药物诱导的不良反应易感性的药物基因组学:一项范围界定综述。
IF 0.4 4区 医学 Q4 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2023-10-09 eCollection Date: 2023-06-01 DOI: 10.2478/abm-2023-0050
Hui-Yin Yow, Sharina Hamzah, Nusaibah Abdul Rahim, Vijayaprakash Suppiah

Background: Statins are the most widely used lipid-lowering agents for patients with hyperlipidemia. However, interindividual variations in efficacy and risk of adverse drug reactions to statin treatment have been widely reported. Ethnicity is well known to be one of the contributing factors to this variation, particularly among Asians.

Objectives: To identify genetic variants associated with statin treatment responses among Asian populations with a focus on four commonly prescribed statins: atorvastatin, rosuvastatin, simvastatin, and pravastatin.

Methods: A literature search was conducted in Medline and Embase databases. Studies published from 2008 to 2021 were included. The title and abstract of each article were screened by two reviewers and verified by another two reviewers. Data charted include information on authors, year of study, study population, statin studied, gene studied, study findings, and data of significant statistical value.

Results: A total of 35 articles were included from the 1,939 original studies related to treatment efficacy and 5 articles out of the 284 original studies related to adverse effects. Genetic variants in transmembrane transporters, cytochrome P450 isoenzymes, and apolipoproteins are the most extensively studied among Asian populations, with a main focus on ethnic Chinese. However, Asia consists of genetically different populations, and the results of this review indicated that there is a paucity of studies on other ethnic groups within Asia.

Conclusions: Considering the ethnicity of patients could provide a potential value to personalized medicine in statin therapy.

背景:他汀类药物是高脂血症患者应用最广泛的降脂药物。然而,他汀类药物治疗的疗效和不良反应风险的个体差异已被广泛报道。众所周知,种族是造成这种差异的因素之一,尤其是在亚洲人中。目的:在亚洲人群中识别与他汀类药物治疗反应相关的基因变异,重点研究四种常用的他汀类药物:阿托伐他汀、瑞舒伐他汀、辛伐他汀和普伐他汀。方法:在Medline和Embase数据库中进行文献检索。包括2008年至2021年发表的研究。每篇文章的标题和摘要由两名评审员筛选,并由另外两名评审人验证。图表中的数据包括作者、研究年份、研究人群、他汀类药物研究、基因研究、研究结果和具有显著统计价值的数据。结果:1939篇与治疗疗效相关的原始研究共收录了35篇文章,284篇与不良反应相关的原始调查共收录了5篇文章。跨膜转运蛋白、细胞色素P450同工酶和载脂蛋白的遗传变异在亚洲人群中研究最为广泛,主要集中在中国人身上。然而,亚洲由基因不同的人群组成,这篇综述的结果表明,对亚洲其他种族群体的研究很少。结论:考虑患者的种族可以为他汀类药物的个性化治疗提供潜在的价值。
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引用次数: 0
Genetic and environmental risk of congenital anomaly. 先天性异常的遗传和环境风险。
IF 0.4 4区 医学 Q4 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2023-08-01 eCollection Date: 2022-12-01 DOI: 10.2478/abm-2022-0031
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引用次数: 0
Ameliorative effect of different mesoporous bioactive glass materials in experimental tibial defects in rats. 不同介孔生物活性玻璃材料对实验性大鼠胫骨缺损的改善作用
IF 0.4 4区 医学 Q4 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2023-06-16 eCollection Date: 2022-10-01 DOI: 10.2478/abm-2022-0027
Ozlem Ozmen, Fatma Tomul, Yusuf Sinan Sirin

Background: Enhancing the bone healing procedure would resultantly improve the post-recovery life quality, as well as the speed with which the patient returns to their former life quality. Porous structures can provide a large surface area and abundant channels to facilitate mass transfer.

Objective: To evaluate the application of mesoporous materials in the bone healing of surgically created defects on the tibiae of male adult Wistar rats.

Methods: The defect areas were evaluated after implantation of 4 types of bioactive glass histopathologically and immunohistochemically. Fifty adult rats were divided into 5 groups including a control group without material. The used products were mesoporous bioactive glass (MBG), Cu-MBG, Zn-MBG, and Cu-Zn-MBG. Unicortical bone defects with a 3 mm diameter were performed in both tibiae of the animals and filled with 4 types of glass particles. The rats were then euthanized at 15 d and 30 d. Tibial samples were collected and the tissues forwarded for histological processing, and examined using light microscopy. Additionally, bone healing was evaluated by assessing the levels of bone morphogenetic protein BMP2, collagen 1, osteocalcin (OST), and vascular endothelial growth factor (VEGF) using immunohistochemical methods.

Results: Within the 15th day, all groups presented connective tissue septa; at the 30th day, the new bone formation was more intense in the Cu-Zn-MBG group. Additionally, BMP2, collagen 1, OST, and VEGF immune expression were more prominent in the Cu-Zn-MBG group.

Conclusions: The study results indicated that MBG may be used for the repairing of bone defects. Cu-Zn-MBG may be the best choice for this purpose.

背景:加强骨愈合过程将提高康复后的生活质量,并加快患者恢复到以前生活质量的速度。多孔结构可提供较大的表面积和丰富的通道以促进质量传递:评估介孔材料在雄性成年 Wistar 大鼠胫骨手术缺损骨愈合中的应用:方法:对植入 4 种生物活性玻璃后的缺损区域进行组织病理学和免疫组织化学评估。50 只成年大鼠被分为 5 组,其中包括不含材料的对照组。所用产品为介孔生物活性玻璃(MBG)、铜-MBG、锌-MBG 和铜-锌-MBG。在动物的两根胫骨上进行直径为 3 毫米的单皮质骨缺损,并填充 4 种玻璃微粒。然后在 15 天和 30 天后对大鼠实施安乐死。收集胫骨样本,将组织送去进行组织学处理,并使用光学显微镜进行检查。此外,还使用免疫组化方法评估骨形态发生蛋白 BMP2、胶原蛋白 1、骨钙素(OST)和血管内皮生长因子(VEGF)的水平,从而评价骨愈合情况:第 15 天内,各组均出现结缔组织间隔;第 30 天时,铜锌-MBG 组的新骨形成更为明显。此外,铜锌 MBG 组的 BMP2、胶原蛋白 1、OST 和血管内皮生长因子免疫表达更为突出:研究结果表明,MBG 可用于修复骨缺损。结论:研究结果表明,MBG 可用于修复骨缺损,铜锌 MBG 可能是修复骨缺损的最佳选择。
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引用次数: 0
Patient-centered high-value integrated care. 以病人为中心的高价值综合护理。
IF 0.4 4区 医学 Q4 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2023-06-16 eCollection Date: 2022-10-01 DOI: 10.2478/abm-2022-0025
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引用次数: 0
Bacterial isolates and their antimicrobial susceptibility profile of superficial and deep-seated skin and soft tissue infections. 浅表和深层皮肤和软组织感染的细菌分离株及其抗生素敏感性分析。
IF 0.6 4区 医学 Q4 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2023-04-01 DOI: 10.2478/abm-2023-0045
Rao Muhammad Abid Khan, Sunil Kumar Dodani, Ali Nadeem, Sana Jamil, Mirza Naqi Zafar

Background: Skin and soft tissue infections (SSTIs) are caused by microbial invasion of healthy or damaged skin. SSTIs are difficult to manage and contribute to chronicity and emergence of antimicrobial resistance.

Objectives: To ascertain the prevalence of bacteria causing SSTIs and their antimicrobial susceptibility patterns.

Methods: A prospective study between November 2020 and May 2021. A total of 447 samples from SSTIs were analyzed.

Results: A total of 347 samples revealed mono-bacterial growth, of which 67% were male. SSTIs are common among patients aged 21-50 years with the dominance (78%) of gram-negative rods (GNRs). Escherichia coli (36%), Klebsiella spp. (22%), Staphylococcus aureus (16%), and Pseudomonas aeruginosa (11%) were predominant organisms. GNRs were highly resistant (>65%) to ciprofloxacin and trimethoprim-sulfamethoxazole. For injectable antibiotics, the highest resistance was determined against ceftriaxone, and the least resistance was determined against amikacin. Resistance against carbapenem was the highest among P. aeruginosa (53%) and Klebsiella spp. (32%). S. aureus showed the highest resistance against ciprofloxacin, and the least resistance was determined against clindamycin. Of 57 S. aureus isolates, 86% isolates were methicillin-resistant Staphylococcus aureus (MRSA). All isolates of P. aeruginosa and S. aureus were sensitive to polymyxin B and vancomycin, respectively. The prevalence of multidrug-resistant E. coli and Klebsiella spp. was higher among deep-seated SSTIs (dSSTIs).

Conclusions: The predominant etiology of SSTIs is GNR. Currently, there is very high resistance against oral antibiotics. Antimicrobial resistance against carbapenem has also increased. Moreover, there is a high frequency of MRSA. MDR E. coli and Klebsiella spp. isolates are frequently involved in dSSTIs.

背景:皮肤和软组织感染(SSTIs)是由微生物侵入健康或受损皮肤引起的。性传播感染难以控制,并导致抗菌素耐药性的长期性和出现。目的:了解引起SSTIs的细菌的流行情况及其药敏模式。方法:2020年11月至2021年5月进行前瞻性研究。共分析了447份ssti样本。结果:共有347份样本发现单细菌生长,其中男性占67%。ssti常见于21-50岁的患者,其中革兰氏阴性棒(gnr)占主导地位(78%)。优势菌为大肠杆菌(36%)、克雷伯氏菌(22%)、金黄色葡萄球菌(16%)和铜绿假单胞菌(11%)。gnr对环丙沙星和甲氧苄啶-磺胺甲恶唑高度耐药(>65%)。注射用抗生素中,头孢曲松耐药最高,阿米卡星耐药最低。铜绿假单胞菌(P. aeruginosa)和克雷伯菌(Klebsiella spp)对碳青霉烯的耐药率最高(53%)。金黄色葡萄球菌对环丙沙星的耐药性最高,对克林霉素的耐药性最低。57株金黄色葡萄球菌中,86%为耐甲氧西林金黄色葡萄球菌(MRSA)。铜绿假单胞菌和金黄色葡萄球菌分别对多粘菌素B和万古霉素敏感。多重耐药大肠杆菌和克雷伯氏菌的流行率在深层感染中较高。结论:GNR是SSTIs的主要病因。目前,对口服抗生素的耐药性非常高。对碳青霉烯的抗菌素耐药性也有所增加。此外,耐甲氧西林金黄色葡萄球菌的发病率很高。耐多药大肠杆菌和克雷伯氏杆菌分离株经常涉及dssti。
{"title":"Bacterial isolates and their antimicrobial susceptibility profile of superficial and deep-seated skin and soft tissue infections.","authors":"Rao Muhammad Abid Khan,&nbsp;Sunil Kumar Dodani,&nbsp;Ali Nadeem,&nbsp;Sana Jamil,&nbsp;Mirza Naqi Zafar","doi":"10.2478/abm-2023-0045","DOIUrl":"https://doi.org/10.2478/abm-2023-0045","url":null,"abstract":"<p><strong>Background: </strong>Skin and soft tissue infections (SSTIs) are caused by microbial invasion of healthy or damaged skin. SSTIs are difficult to manage and contribute to chronicity and emergence of antimicrobial resistance.</p><p><strong>Objectives: </strong>To ascertain the prevalence of bacteria causing SSTIs and their antimicrobial susceptibility patterns.</p><p><strong>Methods: </strong>A prospective study between November 2020 and May 2021. A total of 447 samples from SSTIs were analyzed.</p><p><strong>Results: </strong>A total of 347 samples revealed mono-bacterial growth, of which 67% were male. SSTIs are common among patients aged 21-50 years with the dominance (78%) of gram-negative rods (GNRs). <i>Escherichia coli</i> (36%), <i>Klebsiella</i> spp. (22%), <i>Staphylococcus aureus</i> (16%), and <i>Pseudomonas aeruginosa</i> (11%) were predominant organisms. GNRs were highly resistant (>65%) to ciprofloxacin and trimethoprim-sulfamethoxazole. For injectable antibiotics, the highest resistance was determined against ceftriaxone, and the least resistance was determined against amikacin. Resistance against carbapenem was the highest among <i>P. aeruginosa</i> (53%) and <i>Klebsiella</i> spp. (32%). <i>S. aureus</i> showed the highest resistance against ciprofloxacin, and the least resistance was determined against clindamycin. Of 57 <i>S. aureus</i> isolates, 86% isolates were methicillin-resistant <i>Staphylococcus aureus</i> (MRSA). All isolates of <i>P. aeruginosa</i> and <i>S. aureus</i> were sensitive to polymyxin B and vancomycin, respectively. The prevalence of multidrug-resistant <i>E. coli</i> and <i>Klebsiella</i> spp. was higher among deep-seated SSTIs (dSSTIs).</p><p><strong>Conclusions: </strong>The predominant etiology of SSTIs is GNR. Currently, there is very high resistance against oral antibiotics. Antimicrobial resistance against carbapenem has also increased. Moreover, there is a high frequency of MRSA. MDR <i>E. coli</i> and <i>Klebsiella</i> spp. isolates are frequently involved in dSSTIs.</p>","PeriodicalId":8501,"journal":{"name":"Asian Biomedicine","volume":"17 2","pages":"55-63"},"PeriodicalIF":0.6,"publicationDate":"2023-04-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10505063/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"10311084","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 2
Polymorphism of fucosyltransferase 3 gene is associated with inflammatory bowel disease: a systematic review. focusyltransferase 3基因多态性与炎症性肠病相关:一项系统综述
IF 0.6 4区 医学 Q4 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2023-04-01 DOI: 10.2478/abm-2023-0044
Jiansheng Zheng, Tang Zhu

Background: Inflammatory bowel disease (IBD) is a condition with an unclear genetic basis. Fucosyltransferase 3 (FUT3) could potentially be linked to IBD susceptibility.

Objective: To investigate the association between FUT3 gene polymorphisms and IBD.

Methods: Following the Preferred Reporting Items for Systematic Reviews and Meta-Analyses (PRISMA) 2020 checklist and Population, Intervention, Comparison, Outcomes, and Study (PICOS) guidelines, case-control studies published until April 30, 2020 was searched. Two independent reviewers conducted screening, data extraction, and quality assessment using the Newcastle-Ottawa Scale. Meta-analysis, sensitivity analysis, and Egger tests were performed using RevMan and Stata12.0.

Results: The review included 5 articles and 12 case-control studies involving 1712 IBD patients and 1903 controls. The meta-analysis revealed the following combined odds ratios [95% confidence intervals]: rs3745635 genotype (GA+AA vs GG) 0.84 (0.72-0.97), (GG+GA vs AA) 1.93 (1.23-3.05), (GG vs AA) 2.38 (1.52-3.74), (A vs G) 0.84 (0.73-0.96); rs3894326 genotype (TA+AA vs TT) 1.03 (0.87-1.23), (TT+TA vs AA) 1.19 (0.56-2.51), (TT vs AA) 1.19 (0.56-2.51), (A vs T) 1.02 (0.86-1.20); rs28362459 genotype (TG+GG vs TT) 0.98 (0.85-1.12), (TT+TG vs GG) 1.20 (0.90-1.61), (TT vs GG) 1.21 (0.90-1.62), (G vs T) 0.96 (0.86-1.07). Sensitivity analysis indicated the stability of the results, and Egger analysis showed no significant publication bias.

Conclusions: The rs3745635 gene polymorphism may be associated with IBD susceptibility, whereas the rs3894326 and rs28362459 gene polymorphisms may not be associated with IBD.

背景:炎症性肠病(IBD)是一种遗传基础不明确的疾病。focusyltransferase 3 (FUT3)可能与IBD易感性有关。目的:探讨FUT3基因多态性与IBD的关系。方法:根据系统评价和荟萃分析首选报告项目(PRISMA) 2020清单和人群、干预、比较、结果和研究(PICOS)指南,检索截至2020年4月30日发表的病例对照研究。两名独立审稿人使用纽卡斯尔-渥太华量表进行筛选、数据提取和质量评估。采用RevMan和Stata12.0进行meta分析、敏感性分析和Egger检验。结果:纳入5篇文献和12项病例对照研究,涉及1712例IBD患者和1903例对照。meta分析显示,rs3745635基因型(GA+AA vs GG)的组合优势比为0.84 (0.72-0.97),(GG+GA vs AA) 1.93 (1.23-3.05), (GG vs AA) 2.38 (1.52-3.74), (A vs G) 0.84 (0.73-0.96);rs3894326基因型(TA+AA对TT) 1.03(0.87 ~ 1.23)、(TT+TA对AA) 1.19(0.56 ~ 2.51)、(TT对AA) 1.19(0.56 ~ 2.51)、(A对T) 1.02 (0.86 ~ 1.20);rs28362459基因型(TG+GG vs TT) 0.98 (0.85-1.12), (TT+TG vs GG) 1.20 (0.90-1.61), (TT vs GG) 1.21 (0.90-1.62), (G vs T) 0.96(0.86-1.07)。敏感性分析显示结果的稳定性,Egger分析显示没有明显的发表偏倚。结论:rs3745635基因多态性可能与IBD易感性相关,而rs3894326和rs28362459基因多态性可能与IBD易感性无关。
{"title":"Polymorphism of fucosyltransferase 3 gene is associated with inflammatory bowel disease: a systematic review.","authors":"Jiansheng Zheng,&nbsp;Tang Zhu","doi":"10.2478/abm-2023-0044","DOIUrl":"https://doi.org/10.2478/abm-2023-0044","url":null,"abstract":"<p><strong>Background: </strong>Inflammatory bowel disease (IBD) is a condition with an unclear genetic basis. Fucosyltransferase 3 (FUT3) could potentially be linked to IBD susceptibility.</p><p><strong>Objective: </strong>To investigate the association between <i>FUT3</i> gene polymorphisms and IBD.</p><p><strong>Methods: </strong>Following the Preferred Reporting Items for Systematic Reviews and Meta-Analyses (PRISMA) 2020 checklist and Population, Intervention, Comparison, Outcomes, and Study (PICOS) guidelines, case-control studies published until April 30, 2020 was searched. Two independent reviewers conducted screening, data extraction, and quality assessment using the Newcastle-Ottawa Scale. Meta-analysis, sensitivity analysis, and Egger tests were performed using RevMan and Stata12.0.</p><p><strong>Results: </strong>The review included 5 articles and 12 case-control studies involving 1712 IBD patients and 1903 controls. The meta-analysis revealed the following combined odds ratios [95% confidence intervals]: <i>rs3745635</i> genotype (<i>GA+AA vs GG</i>) 0.84 (0.72-0.97), (<i>GG+GA vs AA</i>) 1.93 (1.23-3.05), (<i>GG vs AA</i>) 2.38 (1.52-3.74), (<i>A vs G</i>) 0.84 (0.73-0.96); <i>rs3894326</i> genotype (<i>TA+AA vs TT</i>) 1.03 (0.87-1.23), (<i>TT+TA vs AA</i>) 1.19 (0.56-2.51), (<i>TT vs AA</i>) 1.19 (0.56-2.51), (<i>A vs T</i>) 1.02 (0.86-1.20); <i>rs28362459</i> genotype (<i>TG+GG vs TT</i>) 0.98 (0.85-1.12), (<i>TT+TG vs GG</i>) 1.20 (0.90-1.61), (<i>TT vs GG</i>) 1.21 (0.90-1.62), (<i>G vs T</i>) 0.96 (0.86-1.07). Sensitivity analysis indicated the stability of the results, and Egger analysis showed no significant publication bias.</p><p><strong>Conclusions: </strong>The <i>rs3745635</i> gene polymorphism may be associated with IBD susceptibility, whereas the <i>rs3894326</i> and <i>rs28362459</i> gene polymorphisms may not be associated with IBD.</p>","PeriodicalId":8501,"journal":{"name":"Asian Biomedicine","volume":"17 2","pages":"45-54"},"PeriodicalIF":0.6,"publicationDate":"2023-04-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10505062/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"10311083","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Copy number variations of cytochrome P450 genes in Kinh Vietnamese. 越南京族细胞色素P450基因拷贝数变异。
IF 0.6 4区 医学 Q4 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2023-04-01 DOI: 10.2478/abm-2023-0048
Nhung Phuong Vu, Ton Dang Nguyen, Binh Huy Nguyen, Duong Thuy Nguyen, Hai Van Nong, Ha Hai Nguyen

Background: The cytochrome P450 (CYP450) family is well known as a major group of drug metabolizing enzymes. The polymorphism of CYP450 genes is the main factor having an impact on the interindividual difference in drug response, including drug efficacy and drug safety. The single nucleotide polymorphism (SNPs) of Vietnamese Kinh has been widely studied, but information about the copy number variations (CNVs) of other CYP450 genes is still unknown.

Objective: To identify the CNV variability of CYP450 in 154 healthy unrelated Kinh Vietnamese, except eCYP2D6, which was previously reported.

Methods: Multiplex Ligation-Dependent Probe Amplification (MLPA) was applied for determination of copy number of 10 CYP450 genes. Later, PCR or quantitative PCR (qPCR) was used to confirm the detected CNVs in randomly chosen subjects.

Results: Of the 154 subjects, along with CYP2D6, 4 other CYP450 genes showed CNVs including duplications (CYP1B1), deletions (CYP2A6 and CYP2C9), and both duplications and deletions (CYP2E1). Among these, CYP2A6 exhibited the greatest frequency of CNVs compared with other CYP450, in which CYP2A6Del accounted for 11%. Meanwhile, allele CYP2E1Del showed the lowest frequency with only 0.3%.

Conclusions: The present study provides new insight into CYP450 CNVs in the Kinh Vietnamese cohort. Our data have contributed to genetic profiling of CYP450 CNVs in Vietnam, which would be helpful for facilitating implementation of pharmacogenetics in drug dosing adjustment in Vietnam.

背景:细胞色素P450 (CYP450)家族是众所周知的一组主要的药物代谢酶。CYP450基因多态性是影响个体间药物反应差异的主要因素,包括药物疗效和药物安全性。越南京族人的单核苷酸多态性(SNPs)已被广泛研究,但其他CYP450基因的拷贝数变异(CNVs)信息尚不清楚。目的:鉴定除eCYP2D6外,154名健康无亲缘关系的越南人CYP450基因的CNV变异性。方法:采用多重连接依赖探针扩增法(Multiplex ligion - dependent Probe Amplification, MLPA)检测10个CYP450基因的拷贝数。随后,随机选择受试者,采用PCR或定量PCR (qPCR)对检测到的CNVs进行确证。结果:154例受试者中,除CYP2D6外,其他4个CYP450基因出现CNVs,包括重复(CYP1B1)、缺失(CYP2A6和CYP2C9)以及重复和缺失(CYP2E1)。其中CYP2A6与其他CYP450相比,出现CNVs的频率最高,其中CYP2A6Del占11%。而CYP2E1Del等位基因出现频率最低,仅为0.3%。结论:本研究为越南京族队列CYP450 CNVs提供了新的见解。我们的数据为越南CYP450 CNVs的遗传图谱做出了贡献,这将有助于促进在越南药物剂量调整中实施药物遗传学。
{"title":"Copy number variations of cytochrome <i>P450</i> genes in Kinh Vietnamese.","authors":"Nhung Phuong Vu,&nbsp;Ton Dang Nguyen,&nbsp;Binh Huy Nguyen,&nbsp;Duong Thuy Nguyen,&nbsp;Hai Van Nong,&nbsp;Ha Hai Nguyen","doi":"10.2478/abm-2023-0048","DOIUrl":"https://doi.org/10.2478/abm-2023-0048","url":null,"abstract":"<p><strong>Background: </strong>The cytochrome P450 (<i>CYP450</i>) family is well known as a major group of drug metabolizing enzymes. The polymorphism of <i>CYP450</i> genes is the main factor having an impact on the interindividual difference in drug response, including drug efficacy and drug safety. The single nucleotide polymorphism (SNPs) of Vietnamese Kinh has been widely studied, but information about the copy number variations (CNVs) of other <i>CYP450</i> genes is still unknown.</p><p><strong>Objective: </strong>To identify the CNV variability of <i>CYP450</i> in 154 healthy unrelated Kinh Vietnamese, except e<i>CYP2D6</i>, which was previously reported.</p><p><strong>Methods: </strong>Multiplex Ligation-Dependent Probe Amplification (MLPA) was applied for determination of copy number of 10 <i>CYP450</i> genes. Later, PCR or quantitative PCR (qPCR) was used to confirm the detected CNVs in randomly chosen subjects.</p><p><strong>Results: </strong>Of the 154 subjects, along with <i>CYP2D6</i>, 4 other <i>CYP450</i> genes showed CNVs including duplications (<i>CYP1B1</i>), deletions (<i>CYP2A6</i> and <i>CYP2C9</i>), and both duplications and deletions (<i>CYP2E1</i>). Among these, <i>CYP2A6</i> exhibited the greatest frequency of CNVs compared with other <i>CYP450</i>, in which <i>CYP2A6</i>Del accounted for 11%. Meanwhile, allele <i>CYP2E1</i>Del showed the lowest frequency with only 0.3%.</p><p><strong>Conclusions: </strong>The present study provides new insight into <i>CYP450</i> CNVs in the Kinh Vietnamese cohort. Our data have contributed to genetic profiling of <i>CYP450</i> CNVs in Vietnam, which would be helpful for facilitating implementation of pharmacogenetics in drug dosing adjustment in Vietnam.</p>","PeriodicalId":8501,"journal":{"name":"Asian Biomedicine","volume":"17 2","pages":"84-92"},"PeriodicalIF":0.6,"publicationDate":"2023-04-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10505059/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"10306690","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Acidic environment could modulate the interferon-γ expression: Implication on modulation of cancer and immune cells' interactions. 酸性环境可调节干扰素-γ的表达:与肿瘤和免疫细胞相互作用的调节有关。
IF 0.6 4区 医学 Q4 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2023-04-01 DOI: 10.2478/abm-2023-0047
Vishal Sharma, Jagdeep Kaur

Background: In rapidly growing solid tumors, insufficient vascularization and poor oxygen supply result in an acidic tumor microenvironment, which can alter immune response.

Objective: To investigate the role of the acidic microenvironment in immune response modulation along with cancer and immune cells' interactions.

Method: To mimic the tumor microenvironment conditions, T cells (Jurkat), macrophages (THP-1), and HeLa (cervical) cells were cultured under acidic conditions (pH 6.9, pH 6.5) and physiological pH (7.4). The HeLa cell culture medium was exploited as a tumor cell conditioned medium. Real-time PCR was carried out to quantify the mRNA levels, while flow cytometry and western blot hybridization was carried out to ascertain the levels of different proteins.

Results: The acidic microenvironment around the T cells (Jurkat) and macrophage cells (THP-1) could lead to the downregulation of the interferon gamma (IFN-γ). An increase in IFN-γ expression was observed when Jurkat and macrophage cells were cultured in HeLa cells conditioned medium (HCM) at low pH (pH 6.9, pH 6.5). The HeLa cells under acidic environment (pH 6.9, pH 6.5) upregulated interleukin 18 levels and secreted it as exosome anchored. Additionally, enhanced nuclear localization of NF-κB was observed in Jurkat and THP-1 cells cultured in HCM (pH 6.9, pH 6.5). Jurkat and THP-1 cultured in HCM revealed enhanced cytotoxicity against the HeLa cells upon reverting the pH of the medium from acidic to physiological pH (pH 7.4).

Conclusion: Collectively, these results suggest that the acidic microenvironment acted as a key barrier to cancer and immune cells' interactions.

背景:在快速生长的实体瘤中,血管化不足和氧气供应不足导致肿瘤微环境呈酸性,从而改变免疫反应。目的:探讨酸性微环境在免疫应答调节及肿瘤与免疫细胞相互作用中的作用。方法:模拟肿瘤微环境条件,分别在酸性(pH 6.9、pH 6.5)和生理pH(7.4)条件下培养T细胞(Jurkat)、巨噬细胞(THP-1)和HeLa (cervical)细胞。利用HeLa细胞培养基作为肿瘤细胞条件培养基。采用Real-time PCR定量表达mRNA水平,采用流式细胞术和western blot杂交检测不同蛋白表达水平。结果:T细胞(Jurkat)和巨噬细胞(THP-1)周围的酸性微环境可导致干扰素γ (IFN-γ)下调。Jurkat细胞和巨噬细胞在低pH (pH 6.9, pH 6.5)的HeLa细胞条件培养基(HCM)中培养时,IFN-γ表达增加。酸性环境下(pH 6.9, pH 6.5)的HeLa细胞上调白细胞介素18水平,并以外泌体锚定的形式分泌白细胞介素18。此外,在HCM (pH 6.9, pH 6.5)培养的Jurkat和THP-1细胞中,NF-κB的核定位增强。在HCM中培养的Jurkat和THP-1显示,当培养基的pH从酸性恢复到生理pH (pH 7.4)时,对HeLa细胞的细胞毒性增强。结论:总的来说,这些结果表明酸性微环境是癌症和免疫细胞相互作用的关键屏障。
{"title":"Acidic environment could modulate the interferon-γ expression: Implication on modulation of cancer and immune cells' interactions.","authors":"Vishal Sharma,&nbsp;Jagdeep Kaur","doi":"10.2478/abm-2023-0047","DOIUrl":"https://doi.org/10.2478/abm-2023-0047","url":null,"abstract":"<p><strong>Background: </strong>In rapidly growing solid tumors, insufficient vascularization and poor oxygen supply result in an acidic tumor microenvironment, which can alter immune response.</p><p><strong>Objective: </strong>To investigate the role of the acidic microenvironment in immune response modulation along with cancer and immune cells' interactions.</p><p><strong>Method: </strong>To mimic the tumor microenvironment conditions, T cells (Jurkat), macrophages (THP-1), and HeLa (cervical) cells were cultured under acidic conditions (pH 6.9, pH 6.5) and physiological pH (7.4). The HeLa cell culture medium was exploited as a tumor cell conditioned medium. Real-time PCR was carried out to quantify the mRNA levels, while flow cytometry and western blot hybridization was carried out to ascertain the levels of different proteins.</p><p><strong>Results: </strong>The acidic microenvironment around the T cells (Jurkat) and macrophage cells (THP-1) could lead to the downregulation of the interferon gamma (IFN-γ). An increase in IFN-γ expression was observed when Jurkat and macrophage cells were cultured in HeLa cells conditioned medium (HCM) at low pH (pH 6.9, pH 6.5). The HeLa cells under acidic environment (pH 6.9, pH 6.5) upregulated interleukin 18 levels and secreted it as exosome anchored. Additionally, enhanced nuclear localization of NF-κB was observed in Jurkat and THP-1 cells cultured in HCM (pH 6.9, pH 6.5). Jurkat and THP-1 cultured in HCM revealed enhanced cytotoxicity against the HeLa cells upon reverting the pH of the medium from acidic to physiological pH (pH 7.4).</p><p><strong>Conclusion: </strong>Collectively, these results suggest that the acidic microenvironment acted as a key barrier to cancer and immune cells' interactions.</p>","PeriodicalId":8501,"journal":{"name":"Asian Biomedicine","volume":"17 2","pages":"72-83"},"PeriodicalIF":0.6,"publicationDate":"2023-04-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10505064/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"10306692","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
期刊
Asian Biomedicine
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