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Organic compatible solutes of halotolerant and halophilic microorganisms. 耐盐和嗜盐微生物的有机相容溶质。
Pub Date : 2005-08-04 DOI: 10.1186/1746-1448-1-5
Mary F Roberts

Microorganisms that adapt to moderate and high salt environments use a variety of solutes, organic and inorganic, to counter external osmotic pressure. The organic solutes can be zwitterionic, noncharged, or anionic (along with an inorganic cation such as K(+)). The range of solutes, their diverse biosynthetic pathways, and physical properties of the solutes that effect molecular stability are reviewed.

适应中盐和高盐环境的微生物使用各种有机和无机溶质来对抗外部渗透压。有机溶质可以是两性离子,不带电,或阴离子(以及无机阳离子,如K(+))。综述了溶质的种类、不同的生物合成途径以及影响分子稳定性的溶质的物理性质。
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引用次数: 340
A hundred years of Dunaliella research: 1905-2005. 杜氏藻百年研究:1905-2005。
Pub Date : 2005-07-04 DOI: 10.1186/1746-1448-1-2
Aharon Oren

A hundred years have passed since the description of the genus Dunaliella, the unicellular green alga which is responsible for most of the primary production in hypersaline environments worldwide. The present paper provides an historical survey of research on Dunaliella, from the early work in the 19th century to the thorough taxonomic studies by Teodoresco, Hamburger, Lerche and others from the beginning of the 20th century onwards. It attempts to trace the origin of some of the most important breakthroughs that have contributed to our present understanding of this alga that plays such a key role in many hypersaline environments.

杜氏藻属是一种单细胞绿藻,在世界范围内高盐环境中负责大部分初级生产,自杜氏藻属被描述以来已经过去了100年。本文对杜氏藻的研究进行了历史回顾,从19世纪早期的工作到20世纪初Teodoresco、Hamburger、Lerche等人深入的分类学研究。它试图追溯一些最重要的突破的起源,这些突破有助于我们目前对这种在许多高盐环境中起着关键作用的藻类的理解。
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引用次数: 384
UV irradiation induces homologous recombination genes in the model archaeon, Halobacterium sp. NRC-1. 紫外线照射诱导模式古细菌盐杆菌NRC-1同源重组基因。
Pub Date : 2005-07-04 DOI: 10.1186/1746-1448-1-3
Shirley McCready, Jochen A Müller, Ivan Boubriak, Brian R Berquist, Wooi Loon Ng, Shiladitya DasSarma

Background: A variety of strategies for survival of UV irradiation are used by cells, ranging from repair of UV-damaged DNA, cell cycle arrest, tolerance of unrepaired UV photoproducts, and shielding from UV light. Some of these responses involve UV-inducible genes, including the SOS response in bacteria and an array of genes in eukaryotes. To address the mechanisms used in the third branch of life, we have studied the model archaeon, Halobacterium sp. strain NRC-1, which tolerates high levels of solar radiation in its natural hypersaline environment.

Results: Cells were irradiated with 30-70 J/m(2) UV-C and an immunoassay showed that the resulting DNA damage was largely repaired within 3 hours in the dark. Under such conditions, transcriptional profiling showed the most strongly up-regulated gene was radA1, the archaeal homolog of rad51/recA, which was induced 7-fold. Additional genes involved in homologous recombination, such as arj1 (recJ-like exonuclease), dbp (eukaryote-like DNA binding protein of the superfamily I DNA and RNA helicases), and rfa3 (replication protein A complex), as well as nrdJ, encoding for cobalamin-dependent ribonucleotide reductase involved in DNA metabolism, was also significantly induced in one or more of our experimental conditions. Neither prokaryotic nor eukaryotic excision repair gene homologs were induced and there was no evidence of an SOS-like response.

Conclusion: These results show that homologous recombination plays an important role in the cellular response of Halobacterium sp. NRC-1 to UV damage. Homologous recombination may permit rescue of stalled replication forks, and/or facilitate recombinational repair. In either case, this provides a mechanism for the observed high-frequency recombination among natural populations of halophilic archaea.

背景:细胞在紫外线照射下的生存策略多种多样,包括修复紫外线损伤的DNA、细胞周期阻滞、对未修复的紫外线光产物的耐受性以及屏蔽紫外线。其中一些反应涉及紫外线诱导基因,包括细菌中的SOS反应和真核生物中的一系列基因。为了解决第三种生命分支的机制,我们研究了模式古细菌,盐杆菌sp.菌株NRC-1,它在天然高盐环境中耐受高水平的太阳辐射。结果:用30-70 J/m(2) UV-C照射细胞,免疫分析显示,DNA损伤在黑暗中3小时内基本修复。在此条件下,转录谱分析显示,上调幅度最大的基因是radA1,它是rad51/recA的古细菌同源基因,被诱导了7倍。参与同源重组的其他基因,如arj1 (rej样核酸外切酶)、dbp(超家族I DNA和RNA解旋酶的真核样DNA结合蛋白)和rfa3(复制蛋白A复合体),以及编码参与DNA代谢的钴胺依赖核糖核苷酸还原酶的nrdJ,也在我们的一个或多个实验条件下被显著诱导。原核细胞和真核细胞的切除修复基因同源性均未被诱导,也没有证据表明存在类似sos的反应。结论:这些结果表明,同源重组在盐杆菌NRC-1对紫外线损伤的细胞反应中起重要作用。同源重组可以挽救停滞的复制叉,和/或促进重组修复。在任何一种情况下,这为观察到的嗜盐古菌自然种群之间的高频重组提供了一种机制。
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引用次数: 95
Effect of salinity stress on the life history variables of Branchipus schaefferi Fisher, 1834 (Crustacea: Anostraca). 盐度胁迫对雪氏Branchipus schaefferi Fisher(甲壳纲:Anostraca)生活史变量的影响。
Pub Date : 2005-07-04 DOI: 10.1186/1746-1448-1-4
S S S Sarma, Lynda Beladjal, S Nandini, Gerardo Cerón-Martínez, Karina Tavera-Briseño

Background: Freshwater anostracans inhabit ephemeral water bodies in which as the water level decreases due to evaporation the salt concentration increases. Thus, for most anostracans salinity becomes the major stress factor.

Results: We tested five concentrations of NaCl (0 to 8 g/l) on the life table demography of Branchipus schaefferi fed Chlorella (alga). Age-specific survivorship curves of male and female B. schaefferi showed nearly a similar pattern in that increased salt concentration resulted in decreased survivorship. The age-specific reproduction (m(x)) of females showed several peaks of cyst production at 0 and 1 g/l salinity while in treatments containing salt at 4 or 8 g/l, there were fewer peaks. Average lifespan, life expectancy at birth, gross and net reproductive rates, generation time and the rate of population increase were all significantly influenced by the salt concentration in the medium. The highest value of net reproductive rate (970 cysts/female) was in treatments containing 0 g/l of salt, while the lowest was 13 cysts/female at 8 g/l. The rate of population increase (r) varied from 0.52 to 0.32 per day depending on the salt concentration in the medium.

Conclusion: The low survival and offspring production of B. schaefferi at higher salinity levels suggests that this species is unlikely to colonize inland saline water bodies. Therefore, the temporary ponds in which it is found, proper conservative measures must be taken to protect this species.

背景:淡水无头纲动物生活在短暂的水体中,在这些水体中,由于蒸发导致水位下降,盐浓度增加。因此,对于大多数肛门纲动物来说,盐度成为主要的应激因素。结果:测定了5种NaCl浓度(0 ~ 8 g/l)对小球藻(Chlorella)的生命表人口统计学的影响。雄性和雌性的年龄特异性生存曲线显示出几乎相似的模式,即盐浓度增加导致存活率降低。雌性的年龄特异性生殖(m(x))在盐浓度为0和1 g/l时出现了几个囊肿生成高峰,而在盐浓度为4或8 g/l时,出现的高峰较少。平均寿命、出生时预期寿命、总繁殖率和净繁殖率、世代时间和种群增长率均受培养基中盐浓度的显著影响。盐浓度为0 g/l时净繁殖率最高,为970个/只,盐浓度为8 g/l时最低,为13个/只。根据培养基中盐浓度的不同,种群增长率(r)在每天0.52 ~ 0.32之间变化。结论:在高盐度条件下,沙费贝的存活率和后代产量较低,表明该物种不太可能在内陆含盐水体中定居。因此,在发现临时池塘的地方,必须采取适当的保护措施来保护这个物种。
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引用次数: 12
Saline Systems: a research journal bridging gene systems and ecosystems. 生理盐水系统:一个研究期刊桥接基因系统和生态系统。
Pub Date : 2005-07-04 DOI: 10.1186/1746-1448-1-1
Shiladitya DasSarma

Saline Systems addresses the publication needs of scientists conducting basic and applied research on coastal and inland saline environments and their flora and fauna. The journal covers research at all levels, from individual genes to whole genomes and entire ecosystems. Rapid progress in the molecular biology and microbial ecology of halotolerant and halophilic organisms and the sensitivity of many saline environments warrants an online journal with fast turnaround times. Many saline environments are threatened and the need for an Open Access journal to address the dissemination and sharing of knowledge on their conservation and management is compelling. Saline Systems provides an interdisciplinary forum for scientists working within all of the relevant fields.

《盐碱化系统》满足了对沿海和内陆盐碱化环境及其动植物进行基础和应用研究的科学家的出版需求。该杂志涵盖了各个层面的研究,从单个基因到整个基因组和整个生态系统。耐盐和嗜盐生物的分子生物学和微生物生态学的快速进展以及许多盐环境的敏感性保证了快速周转时间的在线期刊。许多咸水环境受到威胁,迫切需要一份开放获取期刊来传播和分享有关其保护和管理的知识。生理盐水系统为所有相关领域的科学家提供了一个跨学科的论坛。
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引用次数: 122
Organic compatible solutes of halotolerant and halophilic microorganisms. 耐盐和嗜盐微生物的有机相容溶质。
Pub Date : 2005-01-01 DOI: 10.1016/S0580-9517(08)70029-1
M. Roberts
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引用次数: 285
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Saline systems
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