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Emergence of Form from Function - Mechanical Engineering Approaches to Probe the Role of Stem Cell Mechanoadaptation in Sealing Cell Fate. 从功能中产生形态——用机械工程方法探讨干细胞机械适应在封闭细胞命运中的作用。
Pub Date : 2016-01-01 Epub Date: 2016-10-14 DOI: 10.1080/19490992.2016.1229729
Melissa L Knothe Tate, Peter W Gunning, Vittorio Sansalone

Stem cell "mechanomics" refers to the effect of mechanical cues on stem cell and matrix biology, where cell shape and fate are intrinsic manifestations of form and function. Before specialization, the stem cell itself serves as a sensor and actuator; its structure emerges from its local mechanical milieu as the cell adapts over time. Coupling of novel spatiotemporal imaging and computational methods allows for linking of the energy of adaptation to the structure, biology and mechanical function of the cell. Cutting edge imaging methods enable probing of mechanisms by which stem cells' emergent anisotropic architecture and fate commitment occurs. A novel cell-scale model provides a mechanistic framework to describe stem cell growth and remodeling through mechanical feedback; making use of a generalized virtual power principle, the model accounts for the rate of doing work or the rate of using energy to effect the work. This coupled approach provides a basis to elucidate mechanisms underlying the stem cell's innate capacity to adapt to mechanical stimuli as well as the role of mechanoadaptation in lineage commitment. An understanding of stem cell mechanoadaptation is key to deciphering lineage commitment, during prenatal development, postnatal wound healing, and engineering of tissues.

干细胞“机械组学”是指机械线索对干细胞和基质生物学的影响,其中细胞的形状和命运是形式和功能的内在表现。在分化之前,干细胞本身充当传感器和执行器;随着细胞适应时间的推移,其结构从其局部机械环境中产生。新的时空成像和计算方法的耦合允许将适应能量与细胞的结构,生物学和机械功能联系起来。尖端的成像方法能够探测干细胞涌现的各向异性结构和命运承诺发生的机制。一个新的细胞尺度模型提供了一个机制框架来描述干细胞的生长和重塑通过机械反馈;该模型利用广义虚功率原理,计算了做功速率或做功所用能量的速率。这种耦合方法为阐明干细胞适应机械刺激的先天能力的机制以及机械适应在谱系承诺中的作用提供了基础。了解干细胞的机制适应是破译谱系承诺、产前发育、产后伤口愈合和组织工程的关键。
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引用次数: 15
Leukocyte adhesion and polarization: Role of glycosylphosphatidylinositol-anchored proteins 白细胞粘附和极化:糖基磷脂酰肌醇锚定蛋白的作用
Pub Date : 2015-12-02 DOI: 10.1080/19490992.2015.1127466
D. D. Richardson, M. Fernandez-Borja
ABSTRACT Leukocyte traffic out of the blood stream is crucial for an adequate immune response. Leukocyte extravasation is critically dependent on the binding of leukocyte integrins to their endothelial counterreceptors. This interaction enables the firm adhesion of leukocytes to the luminal side of the vascular wall and allows for leukocyte polarization, crawling and diapedesis. Leukocyte adhesion, polarization and migration requires the orchestrated regulation of integrin adhesion/de-adhesion dynamics and actin cytoskeleton rearrangements. Adhesion strength depends on conformational changes of integrin molecules (affinity) as well as the number of integrin molecules engaged at adhesion sites (valency). These two processes can be independently regulated and several molecules modulate either one or both processes. Cholesterol-rich membrane domains (lipid rafts) participate in integrin regulation and play an important role in leukocyte adhesion, polarization and motility. In particular, lipid raft-resident glycosyl-phosphatidyl-inositol-anchored proteins (GPI-APs) have been reported to regulate leukocyte adhesion, polarization and motility in both integrin-dependent and independent manners. Here, we present our recent discovery concerning the novel role of the GPI-AP prion protein (PrP) in the regulation of β1 integrin-mediated monocyte adhesion, migration and shape polarization in the context of existing literature on GPI-AP-dependent regulation of integrins.
白血球从血液中流出对于充分的免疫反应至关重要。白细胞外渗严重依赖于白细胞整合素与其内皮反受体的结合。这种相互作用使白细胞牢固粘附到血管壁的管腔侧,并允许白细胞极化,爬行和渗出。白细胞的粘附、极化和迁移需要整合素粘附/去粘附动力学和肌动蛋白细胞骨架重排的精心调节。粘附强度取决于整合素分子的构象变化(亲和力)以及参与粘附位点的整合素分子数量(价)。这两个过程可以独立调节,几个分子调节其中一个或两个过程。富含胆固醇的膜结构域(脂筏)参与整合素调控,在白细胞粘附、极化和运动中起重要作用。特别是,脂筏驻留糖酰磷脂酰肌醇锚定蛋白(GPI-APs)已被报道以整合素依赖和独立的方式调节白细胞粘附、极化和运动。在此,我们介绍了我们最近发现的GPI-AP朊蛋白(PrP)在调节β1整合素介导的单核细胞粘附、迁移和形状极化中的新作用,并结合现有文献对GPI-AP依赖性调节整合素的研究。
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引用次数: 7
Possible regulation of caveolar endocytosis and flattening by phosphorylation of F-BAR domain protein PACSIN2/Syndapin II F-BAR结构域蛋白PACSIN2/Syndapin II的磷酸化可能调控空泡内吞和扁平
Pub Date : 2015-12-02 DOI: 10.1080/19490992.2015.1128604
Y. Senju, S. Suetsugu
ABSTRACT. Caveolae are flask-shaped invaginations of the plasma membrane. The BAR domain proteins form crescent-shaped dimers, and their oligomeric filaments are considered to form spirals at the necks of invaginations, such as clathrin-coated pits and caveolae. PACSIN2/Syndapin II is one of the BAR domain-containing proteins, and is localized at the necks of caveolae. PACSIN2 is thought to function in the scission and stabilization of caveolae, through binding to dynamin-2 and EHD2, respectively. These two functions are considered to be switched by PACSIN2 phosphorylation by protein kinase C (PKC) upon hypotonic stress and sheer stress. The phosphorylation decreases the membrane binding affinity of PACSIN2, leading to its removal from caveolae. The removal of the putative oligomeric spiral of PACSIN2 from caveolar membrane invaginations could lead to the deformation of caveolae. Indeed, PACSIN2 removal from caveolae is accompanied by the recruitment of dynamin-2, suggesting that the removal provides space for the function of dynamin-2. Otherwise, the removal of PACSIN2 decreases the stability of caveolae, which could result in the flattening of caveolae. In contrast, an increase in the amount of EHD2 restored caveolar stability. Therefore, PACSIN2 at caveolae stabilizes caveolae, but its removal by phosphorylation could induce both caveolar endocytosis and flattening.
摘要小泡是质膜的瓶状内陷。BAR结构域蛋白形成新月形二聚体,它们的低聚细丝被认为在内陷的颈部形成螺旋状,如网格蛋白包裹的凹坑和小泡。PACSIN2/Syndapin II是一种含BAR结构域的蛋白,定位于小泡的颈部。PACSIN2被认为分别通过与dynamin-2和EHD2结合,在小泡的断裂和稳定中起作用。这两种功能被认为是通过蛋白激酶C (PKC)在低渗应激和纯应激下磷酸化PACSIN2来切换的。磷酸化降低了PACSIN2的膜结合亲和力,导致其从小泡中去除。从囊泡膜内陷中去除假定的PACSIN2寡聚螺旋可能导致囊泡变形。事实上,PACSIN2从小窝中移除伴随着动力蛋白-2的募集,这表明这种移除为动力蛋白-2的功能提供了空间。否则,PACSIN2的去除会降低小泡的稳定性,导致小泡变平。相反,增加EHD2的量可以恢复空泡的稳定性。因此,囊泡处的PACSIN2可以稳定囊泡,但通过磷酸化去除PACSIN2可以诱导囊泡内吞和变平。
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引用次数: 17
Composite biopolymer scaffolds shape muscle nucleus: Insights and perspectives from Drosophila 复合生物聚合物支架塑造肌核:来自果蝇的见解和观点
Pub Date : 2015-10-03 DOI: 10.1080/19490992.2015.1106061
Shuoshuo Wang, T. Volk
Contractile muscle fibers produce enormous intrinsic forces during contraction/relaxation waves. These forces are directly applied to their cytoplasmic organelles including mitochondria, sarcoplasmic reticulum, and multiple nuclei. Data from our analysis of Drosophila larval somatic muscle fibers suggest that an intricate network of organized microtubules (MT) intermingled with Spectrin-Repeat-Containing Proteins (SRCPs) are major structural elements that protect muscle organelles and maintain their structure and position during muscle contraction. Whereas the perinuclear MT network provides structural rigidity to the myonucleus, the SRCPs Nesprin and Spectraplakin form semiflexible filamentous biopolymer networks, providing nuclei with the elasticity required to resist the contractile cytoplasmic forces produced by the muscle. Spectrin repeats are domains found in numerous structural proteins, which are able to unfold under tension and are subject to mechanical stresses in the cell. This unique composite scaffold combines rigidity and resilience in order to neutralize the oscillating cellular forces occurring during muscle contraction/relaxation waves and thereby protect myonuclei. We suggest that the elastic properties of SRCPs are critical for nuclear protection and proper function in muscle fibers.
收缩肌纤维在收缩/松弛波中产生巨大的内力。这些力直接作用于它们的细胞器,包括线粒体、肌浆网和多核。我们对果蝇幼虫体细胞肌纤维的分析数据表明,一个复杂的有组织微管(MT)网络与含有spectrin - repeat的蛋白质(SRCPs)混合在一起,是肌肉收缩过程中保护肌肉细胞器并维持其结构和位置的主要结构元件。核周MT网络为肌核提供结构刚性,而SRCPs Nesprin和Spectraplakin形成半柔性丝状生物聚合物网络,为细胞核提供抵抗肌肉产生的收缩细胞质力所需的弹性。Spectrin重复序列是在许多结构蛋白中发现的结构域,它能够在张力下展开,并受到细胞内机械应力的影响。这种独特的复合支架结合了刚性和弹性,以中和在肌肉收缩/松弛波期间发生的振荡细胞力,从而保护肌核。我们认为srcp的弹性特性对核保护和肌肉纤维的正常功能至关重要。
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引用次数: 6
Intracellular transport and cell surface delivery of the neural cell adhesion molecule (NCAM) 神经细胞粘附分子(NCAM)的细胞内转运和细胞表面递送
Pub Date : 2015-10-03 DOI: 10.1080/19490992.2015.1118194
Iryna Leshchyns’ka, V. Sytnyk
ABSTRACT The neural cell adhesion molecule (NCAM) regulates differentiation and functioning of neurons by accumulating at the cell surface where it mediates the interactions of neurons with the extracellular environment. NCAM also induces a number of intracellular signaling cascades, which coordinate interactions at the cell surface with intracellular processes including changes in gene expression, transport and cytoskeleton remodeling. Since NCAM functions at the cell surface, its transport and delivery to the cell surface play a critical role. Here, we review recent advances in our understanding of the molecular mechanisms of the intracellular transport and cell surface delivery of NCAM. We also discuss the data suggesting a possibility of cross talk between activation of NCAM at the cell surface and the intracellular transport and cell surface delivery of NCAM.
神经细胞粘附分子(neural cell adhesion molecule, NCAM)通过积聚在细胞表面,介导神经元与细胞外环境的相互作用,调控神经元的分化和功能。NCAM还诱导了许多细胞内信号级联反应,这些信号级联反应协调细胞表面与细胞内过程的相互作用,包括基因表达、运输和细胞骨架重塑的变化。由于NCAM在细胞表面起作用,它的运输和传递到细胞表面起着至关重要的作用。在这里,我们回顾了NCAM细胞内转运和细胞表面递送的分子机制的最新进展。我们还讨论了表明细胞表面NCAM的激活与细胞内运输和细胞表面递送之间可能存在串扰的数据。
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引用次数: 6
High-content analysis of Rab protein function at the ER-Golgi interface 兔er -高尔基界面蛋白功能的高含量分析
Pub Date : 2015-10-03 DOI: 10.1080/19490992.2015.1102826
George Galea, J. Simpson
ABSTRACT The Rab family of small GTPases play fundamental roles in the regulation of trafficking pathways between intracellular membranes in eukaryotic cells. In this short commentary we highlight a recent high-content screening study that investigates the roles of Rab proteins in retrograde trafficking from the Golgi complex to the endoplasmic reticulum, and we discuss how the findings of this work and other literature might influence our thoughts on how the architecture of the Golgi complex is regulated.
Rab家族的小gtpase在真核细胞细胞膜间转运途径的调控中起着重要作用。在这篇简短的评论中,我们重点介绍了最近一项高含量的筛选研究,该研究调查了Rab蛋白在高尔基体复合体向内质网逆行运输中的作用,并讨论了这项工作和其他文献的发现如何影响我们对高尔基体结构如何调节的看法。
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引用次数: 17
Cortical depth and differential transport of vegetally localized dorsal and germ line determinants in the zebrafish embryo 斑马鱼胚胎中植物定位的背系和生殖系决定因素的皮质深度和差异运输
Pub Date : 2015-08-03 DOI: 10.1080/19490992.2015.1080891
E. Welch, F. Pelegri
ABSTRACT In zebrafish embryos, factors involved in both axis induction and primordial germ cell (PGC) development are localized to the vegetal pole of the egg. However, upon egg activation axis induction factors experience an asymmetric off-center shift whereas PGC factors undergo symmetric animally-directed movement. We examined the spatial relationship between the proposed dorsal genes wnt8a and grip2a and the PGC factor dazl at the vegetal cortex. We find that RNAs for these genes localize to different cortical depths, with the RNA for the PGC factor dazl at a deeper cortical level than those for axis-inducing factors. In addition, and in contrast to the role of microtubules in the long-range transport of dorsal determinants, we find that germ line determinant transport depends on the actin cytoskeleton. Our results support a model in which vegetal cortex differential RNA transport behavior is facilitated by RNA localization along cortical depth and differential coupling to cortical transport.
在斑马鱼胚胎中,参与轴诱导和原始生殖细胞(PGC)发育的因子都定位于卵的植物极。然而,在卵子激活轴诱导因子经历不对称的偏离中心的移动,而PGC因子经历对称的动物定向运动。我们研究了提出的背侧基因wnt8a和grip2a与植物皮质PGC因子dazl之间的空间关系。我们发现这些基因的RNA定位于不同的皮层深度,与轴诱导因子相比,PGC因子的RNA定位于更深的皮层水平。此外,与微管在背侧决定因子的远程运输中的作用相反,我们发现种系决定因子的运输依赖于肌动蛋白细胞骨架。我们的研究结果支持一个模型,在这个模型中,植物皮层的差异RNA运输行为是由RNA沿皮层深度定位和与皮层运输的差异耦合促进的。
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引用次数: 14
How the SAC gets the axe: Integrating kinetochore microtubule attachments with spindle assembly checkpoint signaling. SAC如何得到斧头:整合着丝点微管附着物与纺锤体组装检查点信号。
Pub Date : 2015-01-01 Epub Date: 2015-10-02 DOI: 10.1080/19490992.2015.1090669
Shivangi Agarwal, Dileep Varma

Mitosis entails the bona fide segregation of duplicated chromosomes. This process is accomplished by the attachment of kinetochores on chromosomes to microtubules (MTs) of the mitotic spindle. Once the appropriate attachment is achieved, the spindle assembly checkpoint (SAC) that delays the premature onset of anaphase needs to be silenced for the cell to proceed to anaphase and cytokinesis. Therefore, while it is imperative to preserve the SAC when kinetochores are unattached, it is of paramount importance that SAC components are removed post kinetochore microtubule (kMT) attachment. Precise knowledge of how kMT attachments trigger the removal of SAC components from kinetochores or how the checkpoint proteins feedback in to the attachment machinery remains elusive. This review aims to describe the recent advances that provide an insight into the interplay of molecular events that coordinate and regulate the SAC activity in response to kMT attachment during cell division.

有丝分裂需要复制染色体的真正分离。这一过程是通过染色体上的着丝点附着在有丝分裂纺锤体的微管(mt)上完成的。一旦获得适当的附着,需要使延迟后期过早开始的纺锤体组装检查点(SAC)沉默,以便细胞进入后期和细胞质分裂。因此,虽然在着丝点未附着时保存SAC是必要的,但在着丝点微管(kMT)附着后去除SAC成分是至关重要的。关于kMT附着体如何触发SAC组分从着丝点移除,以及检查点蛋白如何反馈到附着机制的精确知识仍然是难以捉摸的。这篇综述的目的是描述最近的进展,提供了一个洞察分子事件的相互作用,协调和调节SAC活性响应于细胞分裂期间的kMT附着。
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引用次数: 6
Cytoskeletal self-organization in neuromorphogenesis. 神经形态发生中的细胞骨架自组织。
Pub Date : 2014-03-01 Epub Date: 2014-05-21 DOI: 10.4161/bioa.29070
Leif Dehmelt

Self-organization of dynamic microtubules via interactions with associated motors plays a critical role in spindle formation. The microtubule-based mechanisms underlying other aspects of cellular morphogenesis, such as the formation and development of protrusions from neuronal cells is less well understood. In a recent study, we investigated the molecular mechanism that underlies the massive reorganization of microtubules induced in non-neuronal cells by expression of the neuronal microtubule stabilizer MAP2c. In that study we directly observed cortical dynein complexes and how they affect the dynamic behavior of motile microtubules in living cells. We found that stationary dynein complexes transiently associate with motile microtubules near the cell cortex and that their rapid turnover facilitates efficient microtubule transport. Here, we discuss our findings in the larger context of cellular morphogenesis with specific focus on self-organizing principles from which cellular shape patterns such as the thin protrusions of neurons can emerge.

动态微管通过与相关电机相互作用的自组织在主轴形成中起着关键作用。细胞形态发生的其他方面,如神经元细胞突起的形成和发展,其基于微管的机制尚不清楚。在最近的一项研究中,我们研究了通过表达神经元微管稳定剂MAP2c在非神经元细胞中诱导微管大规模重组的分子机制。在这项研究中,我们直接观察了皮质动力蛋白复合物以及它们如何影响活细胞中运动微管的动态行为。我们发现,固定动力蛋白复合物与细胞皮层附近的运动微管有短暂的联系,它们的快速周转促进了有效的微管运输。在这里,我们在细胞形态发生的大背景下讨论我们的发现,特别关注自组织原则,细胞形状模式,如神经元的细突起可以出现。
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引用次数: 4
Filamin A and Big2: a shared endocytic pathway. 丝蛋白A和Big2:一条共享的内吞途径。
Pub Date : 2014-03-01 Epub Date: 2014-04-07 DOI: 10.4161/bioa.28516
Volney L Sheen

Neural proliferation, migration and differentiation require reorganization of the actin cytoskeleton and regulation of vesicle trafficking to provide stability in maintaining cell adhesions, allow for changes in cell shape, and establishing cell polarity. Human disorders involving the actin-binding Filamin A (FLNA) and vesicle trafficking Brefeldin-associated guanine exchange factor 2 (BIG2 is encoded by the ARFGEF2 gene) proteins are implicated in these various developmental processes, resulting in a malformation of cortical development called periventricular heterotopia (nodules along the ventricular lining) and microcephaly (small brain). Here we discuss several recent reports from our laboratory that demonstrate a shared role for both proteins in actin-associated vesicle trafficking, which is required to maintain the expression and stability of cell adhesion and cell cycle associated molecules during cortical development. While changes in FLNA and BIG2 have first been linked to disorders involving the central nervous system, increasing reports suggest they are associated with aberrant development of various other organ systems in the body. These studies suggest that vesicle trafficking defects in FLN-GEF dependent pathways may contribute to a much broader phenotype than previously realized.

神经细胞的增殖、迁移和分化需要肌动蛋白细胞骨架的重组和囊泡运输的调节,以提供维持细胞粘附的稳定性,允许细胞形状的变化,并建立细胞极性。涉及肌动蛋白结合丝蛋白A (FLNA)和囊泡运输的人类疾病brefeldin相关鸟嘌呤交换因子2 (BIG2由ARFGEF2基因编码)蛋白参与这些不同的发育过程,导致被称为心室周围异位的皮质发育畸形(沿心室内膜的结节)和小头畸形(小脑)。在这里,我们讨论了我们实验室最近的几份报告,这些报告证明了这两种蛋白质在肌动蛋白相关的囊泡运输中具有共同的作用,这是在皮层发育过程中维持细胞粘附和细胞周期相关分子的表达和稳定性所必需的。虽然FLNA和BIG2的变化最初与中枢神经系统疾病有关,但越来越多的报道表明它们与体内各种其他器官系统的异常发育有关。这些研究表明,FLN-GEF依赖通路中的囊泡运输缺陷可能导致比以前认识到的更广泛的表型。
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引用次数: 10
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