Thomas G Simpson, Shenghong He, Laura Wehmeyer, Alek Pogosyan, Fernando Rodriguez Plazas, Ashwini Oswal, Michael G Hart, Rahul S Shah, Harutomo Hasegawa, Christoph Wiest, Sahar Yassine, Xuanjun Guo, Philipp A Loehrer, Anca Merla, Pablo Andrade, Veerle Visser-Vandewalle, Andrea Perera, Kenneth Adindu, Ahmed Raslan, Andrew O’Keeffe, Marie-Laure Welter, Francesca Morgante, Keyoumars Ashkan, Erlick A Pereira, Huiling Tan
Freezing of gait (FOG) is a devastating symptom of Parkinson’s disease (PD) often resulting in disabling falls and loss of independence. It affects half of patients, yet current therapeutic strategies are insufficient, and the underlying neural mechanisms remain poorly understood. This study investigated beta oscillation dynamics in the subthalamic nucleus (STN) during different movement states (sitting, standing, and stepping), while examining the effects of levodopa. Specifically, it aimed to identify pathological activity during stepping by analysing the relationship between the STN and leg muscles and how this is modulated by levodopa. Local field potentials (LFP) in the STN and leg muscle activity measured as Electromyography (EMG) of the gastrocnemius and peroneus longus were recorded in 14 PD patients during sitting, standing, and stepping, ON and OFF levodopa. Levodopa reduced stepping frequency variability, implying improved stepping rhythmicity. Low-beta (12-20 Hz) and high-beta (21-35 Hz) were differentially modulated by stepping movements and levodopa, with reduced high-beta and increased low-beta during stepping compared to standing and sitting. In contrast, levodopa reduced low-beta but increased high-beta activity, highlighting a potential physiological function of high-beta in the STN. Additionally, step-phase specific effects of levodopa were observed including reduced broad-beta band activity in the STN and leg muscles during the late stance and lift-off phase of the contralateral leg when ON medication. Furthermore, STN beta bursts were associated with increased muscle activation at movement initiation, potentially reducing the ability to move freely. This study observed different effects of movement status (sitting vs. stepping vs. standing) on the average amplitude of low- versus high-beta frequency bands, suggesting they may serve distinct functional roles. Furthermore, there is a step-phase specific effect of levodopa on STN LFPs, EMGs, and intermuscular coherence during stepping. These findings offer insight for developing phase-specific stimulation strategies targeting STN beta oscillations during gait.
{"title":"Dopamine and the dynamics of subthalamic and leg muscle activities in parkinsonian stepping","authors":"Thomas G Simpson, Shenghong He, Laura Wehmeyer, Alek Pogosyan, Fernando Rodriguez Plazas, Ashwini Oswal, Michael G Hart, Rahul S Shah, Harutomo Hasegawa, Christoph Wiest, Sahar Yassine, Xuanjun Guo, Philipp A Loehrer, Anca Merla, Pablo Andrade, Veerle Visser-Vandewalle, Andrea Perera, Kenneth Adindu, Ahmed Raslan, Andrew O’Keeffe, Marie-Laure Welter, Francesca Morgante, Keyoumars Ashkan, Erlick A Pereira, Huiling Tan","doi":"10.1093/brain/awaf464","DOIUrl":"https://doi.org/10.1093/brain/awaf464","url":null,"abstract":"Freezing of gait (FOG) is a devastating symptom of Parkinson’s disease (PD) often resulting in disabling falls and loss of independence. It affects half of patients, yet current therapeutic strategies are insufficient, and the underlying neural mechanisms remain poorly understood. This study investigated beta oscillation dynamics in the subthalamic nucleus (STN) during different movement states (sitting, standing, and stepping), while examining the effects of levodopa. Specifically, it aimed to identify pathological activity during stepping by analysing the relationship between the STN and leg muscles and how this is modulated by levodopa. Local field potentials (LFP) in the STN and leg muscle activity measured as Electromyography (EMG) of the gastrocnemius and peroneus longus were recorded in 14 PD patients during sitting, standing, and stepping, ON and OFF levodopa. Levodopa reduced stepping frequency variability, implying improved stepping rhythmicity. Low-beta (12-20 Hz) and high-beta (21-35 Hz) were differentially modulated by stepping movements and levodopa, with reduced high-beta and increased low-beta during stepping compared to standing and sitting. In contrast, levodopa reduced low-beta but increased high-beta activity, highlighting a potential physiological function of high-beta in the STN. Additionally, step-phase specific effects of levodopa were observed including reduced broad-beta band activity in the STN and leg muscles during the late stance and lift-off phase of the contralateral leg when ON medication. Furthermore, STN beta bursts were associated with increased muscle activation at movement initiation, potentially reducing the ability to move freely. This study observed different effects of movement status (sitting vs. stepping vs. standing) on the average amplitude of low- versus high-beta frequency bands, suggesting they may serve distinct functional roles. Furthermore, there is a step-phase specific effect of levodopa on STN LFPs, EMGs, and intermuscular coherence during stepping. These findings offer insight for developing phase-specific stimulation strategies targeting STN beta oscillations during gait.","PeriodicalId":9063,"journal":{"name":"Brain","volume":"145 1","pages":""},"PeriodicalIF":14.5,"publicationDate":"2025-12-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145731090","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Shruti Agrawal, Rebekah Mannix, Vicki Anderson, Miriam Beauchamp, Adam Ferguson, Lucia W Braga, Shu-Ling Chong, Anthony Figaji, Christopher Giza, David K Menon, Michael J Bell
Paediatric traumatic brain injury (pTBI) remains a leading cause of death and disability in children around the world. The evidence to support pTBI management in children notably lags that in adult populations with a lack of data available to inform management. Injury mechanisms and physiologic responses vary considerably across the developmental spectrum of childhood, bringing unique challenges to the management of pTBI. This is compounded further by complexity of neurodevelopmental changes influencing long-term outcomes. The foundation of current understanding of pTBI is laid on the innovative work done over the turn of the century. Incremental progress in the last few years has furthered our understanding of mechanisms, disease pathophysiology, recovery pathways and consequences from pTBI. There are developments in identification of biomarkers that can help diagnosis as well as predict outcomes more accurately to guide clinical decision making and track long-term outcomes. However, this progress has been slow, and more work is required to translate the large body of observational work into interventions to help improve outcomes from pTBI. This review aims to synthesise recent findings, evaluate existing evidence, and propose future research directions. Structured to first address key epidemiological and pathophysiological differences in the paediatric population with associated clinical challenges, followed by the potential role of physiological, blood and imaging biomarkers, this review seeks to provide a comprehensive update. Additionally, it addresses current evidence gaps in therapeutic strategies, rehabilitation needs and comprehensive systems of care, integrating insights from high and low resource settings. Finally, it reviews current research with a view to offer recommendations to reduce the evidence gaps in pTBI.
{"title":"Paediatric traumatic brain injury: unique population and unique challenges","authors":"Shruti Agrawal, Rebekah Mannix, Vicki Anderson, Miriam Beauchamp, Adam Ferguson, Lucia W Braga, Shu-Ling Chong, Anthony Figaji, Christopher Giza, David K Menon, Michael J Bell","doi":"10.1093/brain/awaf459","DOIUrl":"https://doi.org/10.1093/brain/awaf459","url":null,"abstract":"Paediatric traumatic brain injury (pTBI) remains a leading cause of death and disability in children around the world. The evidence to support pTBI management in children notably lags that in adult populations with a lack of data available to inform management. Injury mechanisms and physiologic responses vary considerably across the developmental spectrum of childhood, bringing unique challenges to the management of pTBI. This is compounded further by complexity of neurodevelopmental changes influencing long-term outcomes. The foundation of current understanding of pTBI is laid on the innovative work done over the turn of the century. Incremental progress in the last few years has furthered our understanding of mechanisms, disease pathophysiology, recovery pathways and consequences from pTBI. There are developments in identification of biomarkers that can help diagnosis as well as predict outcomes more accurately to guide clinical decision making and track long-term outcomes. However, this progress has been slow, and more work is required to translate the large body of observational work into interventions to help improve outcomes from pTBI. This review aims to synthesise recent findings, evaluate existing evidence, and propose future research directions. Structured to first address key epidemiological and pathophysiological differences in the paediatric population with associated clinical challenges, followed by the potential role of physiological, blood and imaging biomarkers, this review seeks to provide a comprehensive update. Additionally, it addresses current evidence gaps in therapeutic strategies, rehabilitation needs and comprehensive systems of care, integrating insights from high and low resource settings. Finally, it reviews current research with a view to offer recommendations to reduce the evidence gaps in pTBI.","PeriodicalId":9063,"journal":{"name":"Brain","volume":"15 1","pages":""},"PeriodicalIF":14.5,"publicationDate":"2025-12-11","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145731091","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Óscar González-Velasco, Rosanna Parlato, Rüstem Yilmaz, Lorena Decker, Sonja Menge, Axel Freischmidt, Xiaoxu Yang, Nikshitha Tulasi, David Brenner, Peter M Andersen, Karin M E Forsberg, Johannes C M Schlachetzki, Benedikt Brors, Lena Voith von Voithenberg, Jochen H Weishaupt
Amyotrophic lateral sclerosis (ALS) is characterized by the progressive degeneration of cortical and spinal motor neurons. Mendelian germline mutations often cause familial ALS (fALS) but only approximately ten percent of sporadic ALS cases (sALS). We leveraged DNA and single cell RNA-sequencing data from autopsy tissue to explore the presence of somatic mosaic variants in sALS cases. Deep targeted panel sequencing of known ALS disease genes in motor cortex tissue revealed an enrichment of low allele frequency variants in sALS, but not in fALS with an identified monogenic cause. In silico analysis predicted increased pathogenicity of mosaic mutations in various known ALS mutational hot spots. In particular, we identified the somatic FUS variant p.E516X, located in an established hotspot for germline ALS mutations, which leads to nucleo-cytoplasmic mislocalization and aggregation typical for ALS FUS pathology. Additionally, we performed somatic variant calling on single cell RNA-sequencing data from sALS tissue and revealed a specific accumulation of somatic variants in excitatory neurons, reinforcing a neuron-autonomous disease initiation. Collectively, this study indicates that somatic mutations within the motor cortex, especially in excitatory neurons, may contribute to sALS development.
{"title":"Somatic gene mutations in the motor cortex of patients with sporadic amyotrophic lateral sclerosis","authors":"Óscar González-Velasco, Rosanna Parlato, Rüstem Yilmaz, Lorena Decker, Sonja Menge, Axel Freischmidt, Xiaoxu Yang, Nikshitha Tulasi, David Brenner, Peter M Andersen, Karin M E Forsberg, Johannes C M Schlachetzki, Benedikt Brors, Lena Voith von Voithenberg, Jochen H Weishaupt","doi":"10.1093/brain/awaf460","DOIUrl":"https://doi.org/10.1093/brain/awaf460","url":null,"abstract":"Amyotrophic lateral sclerosis (ALS) is characterized by the progressive degeneration of cortical and spinal motor neurons. Mendelian germline mutations often cause familial ALS (fALS) but only approximately ten percent of sporadic ALS cases (sALS). We leveraged DNA and single cell RNA-sequencing data from autopsy tissue to explore the presence of somatic mosaic variants in sALS cases. Deep targeted panel sequencing of known ALS disease genes in motor cortex tissue revealed an enrichment of low allele frequency variants in sALS, but not in fALS with an identified monogenic cause. In silico analysis predicted increased pathogenicity of mosaic mutations in various known ALS mutational hot spots. In particular, we identified the somatic FUS variant p.E516X, located in an established hotspot for germline ALS mutations, which leads to nucleo-cytoplasmic mislocalization and aggregation typical for ALS FUS pathology. Additionally, we performed somatic variant calling on single cell RNA-sequencing data from sALS tissue and revealed a specific accumulation of somatic variants in excitatory neurons, reinforcing a neuron-autonomous disease initiation. Collectively, this study indicates that somatic mutations within the motor cortex, especially in excitatory neurons, may contribute to sALS development.","PeriodicalId":9063,"journal":{"name":"Brain","volume":"78 1","pages":""},"PeriodicalIF":14.5,"publicationDate":"2025-12-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145717320","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
This scientific commentary refers to ‘White matter signals reflect information transmission between brain regions during seizures’ by Revell et al. (https://doi.org/10.1093/brain/awaf444).
{"title":"Beyond grey","authors":"Manuel Mercier","doi":"10.1093/brain/awaf461","DOIUrl":"https://doi.org/10.1093/brain/awaf461","url":null,"abstract":"This scientific commentary refers to ‘White matter signals reflect information transmission between brain regions during seizures’ by Revell et al. (https://doi.org/10.1093/brain/awaf444).","PeriodicalId":9063,"journal":{"name":"Brain","volume":"26 1","pages":""},"PeriodicalIF":14.5,"publicationDate":"2025-12-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145728738","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Infections are recognised triggers for several neuroinflammatory disorders. The COVID-19 pandemic’s nonpharmaceutical interventions sharply curtailed pathogen exposure, creating a natural experiment to test infection-disease links. Using Japan’s National Claims Database, we first validated the nationwide decline with two strictly infection-dependent conditions—epidemic keratoconjunctivitis and influenza-associated encephalopathy—whose monthly incidences fell by >70% after April 2020. Next, we applied an interrupted time-series design, a causal-inference method for longitudinal data, to nine immune-mediated inflammatory diseases. Unsupervised clustering of model-derived level and slope changes identified three data-driven clusters. The first cluster, comprising Guillain–Barré syndrome and acute disseminated encephalomyelitis, showed large, statistically significant level drops (p < 0.001), particularly in women, consistent with infection-susceptible pathophysiology. The second cluster, including myasthenia gravis and optic neuritis, exhibited transient declines followed by significant positive post-intervention slopes (p < 0.001), suggesting deferred diagnosis, treatment interruption, or immune rebound. The third cluster, consisting of sarcoidosis, neuromyelitis optica, multiple sclerosis, Vogt–Koyanagi–Harada disease, and Behçet’s disease, remained stable, suggesting limited or complex infectious links. These data-driven trajectories mirror clinical pathophysiology and demonstrate that reduced pathogen exposure affects neuroinflammatory disease onset to varying degrees. This framework supports infection-related risk stratification, preventive strategies, and continuity planning in neuroimmunology practice.
{"title":"Natural experiment on neuroinflammatory disease incidence and infection links pre- and post-COVID-19","authors":"Masahiro Akada, Masayuki Hata, Masahiro Miyake, Kenji Ishihara, Yuki Muraoka, Satoshi Morooka, Hiroshi Tamura, Akitaka Tsujikawa","doi":"10.1093/brain/awaf458","DOIUrl":"https://doi.org/10.1093/brain/awaf458","url":null,"abstract":"Infections are recognised triggers for several neuroinflammatory disorders. The COVID-19 pandemic’s nonpharmaceutical interventions sharply curtailed pathogen exposure, creating a natural experiment to test infection-disease links. Using Japan’s National Claims Database, we first validated the nationwide decline with two strictly infection-dependent conditions—epidemic keratoconjunctivitis and influenza-associated encephalopathy—whose monthly incidences fell by &gt;70% after April 2020. Next, we applied an interrupted time-series design, a causal-inference method for longitudinal data, to nine immune-mediated inflammatory diseases. Unsupervised clustering of model-derived level and slope changes identified three data-driven clusters. The first cluster, comprising Guillain–Barré syndrome and acute disseminated encephalomyelitis, showed large, statistically significant level drops (p &lt; 0.001), particularly in women, consistent with infection-susceptible pathophysiology. The second cluster, including myasthenia gravis and optic neuritis, exhibited transient declines followed by significant positive post-intervention slopes (p &lt; 0.001), suggesting deferred diagnosis, treatment interruption, or immune rebound. The third cluster, consisting of sarcoidosis, neuromyelitis optica, multiple sclerosis, Vogt–Koyanagi–Harada disease, and Behçet’s disease, remained stable, suggesting limited or complex infectious links. These data-driven trajectories mirror clinical pathophysiology and demonstrate that reduced pathogen exposure affects neuroinflammatory disease onset to varying degrees. This framework supports infection-related risk stratification, preventive strategies, and continuity planning in neuroimmunology practice.","PeriodicalId":9063,"journal":{"name":"Brain","volume":"3 1","pages":""},"PeriodicalIF":14.5,"publicationDate":"2025-12-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145704284","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Eleonora M Vromen, Diederick M de Leeuw, Argonde C van Harten, Charlotte E Teunissen, Wiesje M van der Flier, Pieter Jelle Visser, Betty M Tijms
Individuals with mild cognitive impairment (MCI) and an abnormal amyloid biomarker (A+) are at considerable increased risk of developing dementia. Still, these individuals vary greatly in rates of cognitive decline, and the mechanisms underlying this heterogeneity remain largely unclear. One factor related to an increased risk of progression to dementia is having an abnormal tau status (T+), but this still explains only part of the variance. Furthermore, previous work has indicated that MCI A+ individuals with T- or T+ are characterized by distinct molecular processes as reflected by distinct CSF proteomic profiles. As such, it could be hypothesized that differences in rates of cognitive decline in A+ MCI with abnormal or normal tau status may be explained by distinct underlying mechanisms. We studied this question using an untargeted CSF proteomic approach in individuals with MCI and abnormal amyloid. We measured untargeted Tandem Mass Tag (TMT) mass spectrometry proteomics in CSF of 80 A+ MCI individuals from the Amsterdam Dementia Cohort [age 66 ± 7.9 years, 52 (65%) T+]. For each protein, we tested if CSF levels were related to time to progression to dementia using Cox survival models; and with decline on the Mini-Mental State Examination (MMSE) with linear mixed models, correcting for age, sex and education. We validated our results in the independent Alzheimer's Disease Neuroimaging Initiative (ADNI) that employed the orthogonal CSF Soma logic protein measures in 245 CSF A+ MCI individuals [age 73 ± 7.2 years, 135 (55%) T+]. In total, we found 664 (29%) proteins to be related to cognitive decline in A+T+ and 718 (31%) proteins in A+T-. In A+T+, higher levels of 393 proteins that were associated with synaptic plasticity processes, and lower levels of 271 proteins associated with the immune function processes predicted a steeper decline on the MMSE and faster progression to dementia. In A+T-, higher levels of 306 proteins that were related to blood-brain barrier impairment and lower levels of 412 proteins associated with synaptic plasticity processes predicted a steeper decline; 67% of pathways associated with a decline in A+T+ and 58% in A+T- were replicated in ADNI. In conclusion, cognitive decline in A+ MCI individuals with and without tau may involve distinct underlying pathophysiology. These findings suggest that treatments aiming to delay cognitive decline may need tailoring according to the underlying mechanism of these patient groups, and that amyloid and tau levels could aid in stratification of selecting patients.
{"title":"CSF proteomic profiles related to cognitive decline in MCI A+ depend on tau levels.","authors":"Eleonora M Vromen, Diederick M de Leeuw, Argonde C van Harten, Charlotte E Teunissen, Wiesje M van der Flier, Pieter Jelle Visser, Betty M Tijms","doi":"10.1093/brain/awaf251","DOIUrl":"10.1093/brain/awaf251","url":null,"abstract":"<p><p>Individuals with mild cognitive impairment (MCI) and an abnormal amyloid biomarker (A+) are at considerable increased risk of developing dementia. Still, these individuals vary greatly in rates of cognitive decline, and the mechanisms underlying this heterogeneity remain largely unclear. One factor related to an increased risk of progression to dementia is having an abnormal tau status (T+), but this still explains only part of the variance. Furthermore, previous work has indicated that MCI A+ individuals with T- or T+ are characterized by distinct molecular processes as reflected by distinct CSF proteomic profiles. As such, it could be hypothesized that differences in rates of cognitive decline in A+ MCI with abnormal or normal tau status may be explained by distinct underlying mechanisms. We studied this question using an untargeted CSF proteomic approach in individuals with MCI and abnormal amyloid. We measured untargeted Tandem Mass Tag (TMT) mass spectrometry proteomics in CSF of 80 A+ MCI individuals from the Amsterdam Dementia Cohort [age 66 ± 7.9 years, 52 (65%) T+]. For each protein, we tested if CSF levels were related to time to progression to dementia using Cox survival models; and with decline on the Mini-Mental State Examination (MMSE) with linear mixed models, correcting for age, sex and education. We validated our results in the independent Alzheimer's Disease Neuroimaging Initiative (ADNI) that employed the orthogonal CSF Soma logic protein measures in 245 CSF A+ MCI individuals [age 73 ± 7.2 years, 135 (55%) T+]. In total, we found 664 (29%) proteins to be related to cognitive decline in A+T+ and 718 (31%) proteins in A+T-. In A+T+, higher levels of 393 proteins that were associated with synaptic plasticity processes, and lower levels of 271 proteins associated with the immune function processes predicted a steeper decline on the MMSE and faster progression to dementia. In A+T-, higher levels of 306 proteins that were related to blood-brain barrier impairment and lower levels of 412 proteins associated with synaptic plasticity processes predicted a steeper decline; 67% of pathways associated with a decline in A+T+ and 58% in A+T- were replicated in ADNI. In conclusion, cognitive decline in A+ MCI individuals with and without tau may involve distinct underlying pathophysiology. These findings suggest that treatments aiming to delay cognitive decline may need tailoring according to the underlying mechanism of these patient groups, and that amyloid and tau levels could aid in stratification of selecting patients.</p>","PeriodicalId":9063,"journal":{"name":"Brain","volume":" ","pages":"4389-4399"},"PeriodicalIF":11.7,"publicationDate":"2025-12-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12677021/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144658373","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Charles Willard, Lemuel Puglisi, Daniele Ravi, Mariia Dmitrieva, Rozemarijn M Mattiesing, Frederik Barkhof, Daniel C Alexander, Danielle E Harlow, Daniela Piani-Meier, Arman Eshaghi
Multiple sclerosis (MS) is a highly heterogeneous disease in its clinical manifestation and progression. Predicting individual disease courses is key for aligning treatments with underlying pathobiology. We developed an unsupervised machine learning model integrating MRI-derived measures with serum neurofilament light chain (sNfL) levels to identify biologically informed MS subtypes and stages. Using a training cohort of patients with relapsing-remitting and secondary progressive MS (n = 189), with validation on a newly diagnosed population (n = 445), we discovered two distinct subtypes defined by the timing of sNfL elevation and MRI abnormalities (early- and late-sNfL types). In comparison to MRI-only models, incorporating sNfL with MRI improved correlations of data-derived stages with the Expanded Disability Status Scale in the training (Spearman's ρ = 0.420 versus MRI-only ρ = 0.231, P = 0.001) and external test sets (ρ = 0.163 for MRI-sNfL, versus ρ = 0.067 for MRI-only). The early-sNfL subtype showed elevated sNfL, corpus callosum injury and early lesion accrual, reflecting more active inflammation and neurodegeneration, whereas the late-sNfL group showed early volume loss in the cortical and deep grey matter volumes, with later sNfL elevation. Cross-sectional subtyping predicted longitudinal radiological activity: the early-sNfL group showed a 144% increased risk of new lesion formation (hazard ratio = 2.44, 95% confidence interval 1.38-4.30, P < 0.005) compared with the late-sNfL group. Baseline subtyping, over time, predicted treatment effect on new lesion formation on the external test set (faster lesion accrual in early-sNfL compared with late-sNfL, P = 0.01), in addition to treatment effects on brain atrophy (early sNfL average percentage brain volume change: -0.41, late-sNfL = -0.31, P = 0.04). Integration of sNfL provides an improved framework in comparison to MRI-only subtyping of MS to stage disease progression and inform prognosis. Our model predicted treatment responsiveness in early, more active disease states. This approach offers a powerful alternative to conventional clinical phenotypes and supports future efforts to refine prognostication and guide personalized therapy in MS.
{"title":"Combined magnetic resonance imaging and serum analysis reveals distinct multiple sclerosis types.","authors":"Charles Willard, Lemuel Puglisi, Daniele Ravi, Mariia Dmitrieva, Rozemarijn M Mattiesing, Frederik Barkhof, Daniel C Alexander, Danielle E Harlow, Daniela Piani-Meier, Arman Eshaghi","doi":"10.1093/brain/awaf331","DOIUrl":"10.1093/brain/awaf331","url":null,"abstract":"<p><p>Multiple sclerosis (MS) is a highly heterogeneous disease in its clinical manifestation and progression. Predicting individual disease courses is key for aligning treatments with underlying pathobiology. We developed an unsupervised machine learning model integrating MRI-derived measures with serum neurofilament light chain (sNfL) levels to identify biologically informed MS subtypes and stages. Using a training cohort of patients with relapsing-remitting and secondary progressive MS (n = 189), with validation on a newly diagnosed population (n = 445), we discovered two distinct subtypes defined by the timing of sNfL elevation and MRI abnormalities (early- and late-sNfL types). In comparison to MRI-only models, incorporating sNfL with MRI improved correlations of data-derived stages with the Expanded Disability Status Scale in the training (Spearman's ρ = 0.420 versus MRI-only ρ = 0.231, P = 0.001) and external test sets (ρ = 0.163 for MRI-sNfL, versus ρ = 0.067 for MRI-only). The early-sNfL subtype showed elevated sNfL, corpus callosum injury and early lesion accrual, reflecting more active inflammation and neurodegeneration, whereas the late-sNfL group showed early volume loss in the cortical and deep grey matter volumes, with later sNfL elevation. Cross-sectional subtyping predicted longitudinal radiological activity: the early-sNfL group showed a 144% increased risk of new lesion formation (hazard ratio = 2.44, 95% confidence interval 1.38-4.30, P < 0.005) compared with the late-sNfL group. Baseline subtyping, over time, predicted treatment effect on new lesion formation on the external test set (faster lesion accrual in early-sNfL compared with late-sNfL, P = 0.01), in addition to treatment effects on brain atrophy (early sNfL average percentage brain volume change: -0.41, late-sNfL = -0.31, P = 0.04). Integration of sNfL provides an improved framework in comparison to MRI-only subtyping of MS to stage disease progression and inform prognosis. Our model predicted treatment responsiveness in early, more active disease states. This approach offers a powerful alternative to conventional clinical phenotypes and supports future efforts to refine prognostication and guide personalized therapy in MS.</p>","PeriodicalId":9063,"journal":{"name":"Brain","volume":" ","pages":"4578-4591"},"PeriodicalIF":11.7,"publicationDate":"2025-12-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12678051/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145653561","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Selma Lugtmeijer, Edward H F de Haan, H Steven Scholte
{"title":"Reply: Lack of statistical significance is not evidence against modularity in visual feature processing.","authors":"Selma Lugtmeijer, Edward H F de Haan, H Steven Scholte","doi":"10.1093/brain/awaf364","DOIUrl":"10.1093/brain/awaf364","url":null,"abstract":"","PeriodicalId":9063,"journal":{"name":"Brain","volume":" ","pages":"e115-e118"},"PeriodicalIF":11.7,"publicationDate":"2025-12-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145197588","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Fraser Aitken, Joel S Winston, Jonathan O'Muircheartaigh, David W Carmichael
Despite decades of development and clinical application, drug-resistant epilepsy occurs in 25%-30% of patients. One limiting factor in the success of antiseizure medications are challenges in mapping the neural effects of epilepsy drugs to seizure mechanisms in humans. Most antiseizure medications were developed in animal models and primarily target nano-scale structures like ion channels and receptors. However, they exert their effects and are typically measured in humans at the macro-scale using techniques like EEG and conventional functional MRI (fMRI). This disconnect between the mechanisms of pharmaceutical interventions and the clinical management of epilepsy leaves a critical gap in our understanding. This is because all seizures, even those of a generalized nature, appear to initiate in intermediate scale, local microcircuits and then propagate from that initial ictogenic zone. Invasive electrophysiological recordings in both animal models and humans have shown that one such microcircuit, cortical layers, and more specifically deep cortical layers, play a critical role in seizure generation in both generalized and focal epilepsies, serving as the critical link between nano-scale dysfunctions and the macro-scale activity observed in seizures. Laminar fMRI, a technique capable of resolving activity across cortical depths, offers a promising avenue to bridge this gap. By providing a non-invasive measure of laminar response alterations in humans, it could complement animal model and electrophysiological findings, offering novel insights into the layer-specific mechanisms of seizure generation and propagation in humans. This review discusses evidence for this concept, highlighting key findings from animal models and human intracranial recordings in this regard, and details how laminar fMRI may be able to refine our understanding of epilepsy at the microcircuit level. It concludes with a discussion regarding the possible role of laminar fMRI in improving surgical targeting for focal epilepsies, elucidating the mechanistic effects of antiseizure medications, and ultimately, targeting current and future epilepsy treatments.
{"title":"The potential of laminar functional MRI in refining the understanding of epilepsy in humans.","authors":"Fraser Aitken, Joel S Winston, Jonathan O'Muircheartaigh, David W Carmichael","doi":"10.1093/brain/awaf320","DOIUrl":"10.1093/brain/awaf320","url":null,"abstract":"<p><p>Despite decades of development and clinical application, drug-resistant epilepsy occurs in 25%-30% of patients. One limiting factor in the success of antiseizure medications are challenges in mapping the neural effects of epilepsy drugs to seizure mechanisms in humans. Most antiseizure medications were developed in animal models and primarily target nano-scale structures like ion channels and receptors. However, they exert their effects and are typically measured in humans at the macro-scale using techniques like EEG and conventional functional MRI (fMRI). This disconnect between the mechanisms of pharmaceutical interventions and the clinical management of epilepsy leaves a critical gap in our understanding. This is because all seizures, even those of a generalized nature, appear to initiate in intermediate scale, local microcircuits and then propagate from that initial ictogenic zone. Invasive electrophysiological recordings in both animal models and humans have shown that one such microcircuit, cortical layers, and more specifically deep cortical layers, play a critical role in seizure generation in both generalized and focal epilepsies, serving as the critical link between nano-scale dysfunctions and the macro-scale activity observed in seizures. Laminar fMRI, a technique capable of resolving activity across cortical depths, offers a promising avenue to bridge this gap. By providing a non-invasive measure of laminar response alterations in humans, it could complement animal model and electrophysiological findings, offering novel insights into the layer-specific mechanisms of seizure generation and propagation in humans. This review discusses evidence for this concept, highlighting key findings from animal models and human intracranial recordings in this regard, and details how laminar fMRI may be able to refine our understanding of epilepsy at the microcircuit level. It concludes with a discussion regarding the possible role of laminar fMRI in improving surgical targeting for focal epilepsies, elucidating the mechanistic effects of antiseizure medications, and ultimately, targeting current and future epilepsy treatments.</p>","PeriodicalId":9063,"journal":{"name":"Brain","volume":" ","pages":"4180-4197"},"PeriodicalIF":11.7,"publicationDate":"2025-12-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12677026/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144942014","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}