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Hik28-dependent and Hik28-independent ABC transporters were revealed by proteome-wide analysis of ΔHik28 under combined stress. 在联合胁迫下,通过蛋白质组分析ΔHik28揭示了依赖hik28和不依赖hik28的ABC转运蛋白。
IF 2.8 3区 生物学 Q3 Biochemistry, Genetics and Molecular Biology Pub Date : 2022-07-06 DOI: 10.1186/s12860-022-00421-w
Pavinee Kurdrid, Rayakorn Yutthanasirikul, Sirilak Saree, Jittisak Senachak, Monpaveekorn Saelee, Apiradee Hongsthong

Synechocystis histidine kinase, Sll0474: Hik28, a signal protein in a two-component signal transduction system, plays a critical role in responding to a decrease in growth temperature and is also involved in nitrogen metabolism. In the present study, under combined stress from non-optimal growth temperature and nitrogen depletion, a comparative proteomic analysis of the wild type (WT) and a deletion mutant (MT) of Synechocystis histidine kinase, Sll0474: Hik28, in a two-component signal transduction system identified the specific groups of ABC transporters that were Hik28-dependent, e.g., the iron transporter, and Hik28-independent, e.g., the phosphate transporter. The iron transporter, AfuA, was found to be upregulated only in the WT strain grown under the combined stress of high temperature and nitrogen depletion. Whereas, the expression level of the phosphate transporter, PstS, was increased in both the WT and MT strains. Moreover, the location in the genome of the genes encoding Hik28 and ABC transporters in Synechocystis sp. PCC6803 were analyzed in parallel with the comparative proteomic data. The results suggested the regulation of the ABC transporters by the gene in a two-component system located in an adjacent location in the genome.

Synechocystis histidine kinase, Sll0474: Hik28是双组分信号转导系统中的信号蛋白,在响应生长温度降低中起关键作用,也参与氮代谢。在本研究中,在非最佳生长温度和氮消耗的联合胁迫下,对双组分信号转导系统中Synechocystis组氨酸激酶Sll0474: Hik28的野生型(WT)和缺失突变型(MT)进行了比较蛋白质组学分析,确定了依赖Hik28的ABC转运蛋白的特定群体,例如铁转运蛋白,以及不依赖Hik28的转运蛋白,例如磷酸盐转运蛋白。铁转运蛋白AfuA仅在高温缺氮联合胁迫下生长的WT菌株中表达上调。而磷酸转运体PstS的表达量在WT和MT菌株中均有所增加。此外,结合比较蛋白质组学数据,对Synechocystis sp. PCC6803中编码Hik28和ABC转运蛋白的基因在基因组中的位置进行了分析。结果表明,该基因在一个位于基因组邻近位置的双组分系统中调控ABC转运体。
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引用次数: 0
Upregulation of CCT3 predicts poor prognosis and promotes cell proliferation via inhibition of ferroptosis and activation of AKT signaling in lung adenocarcinoma. 在肺腺癌中,CCT3表达上调可通过抑制铁下垂和激活AKT信号传导来预测预后不良,促进细胞增殖。
IF 2.8 3区 生物学 Q3 Biochemistry, Genetics and Molecular Biology Pub Date : 2022-06-30 DOI: 10.1186/s12860-022-00424-7
Kun Wang, Jian He, Changling Tu, Hui Xu, Xugang Zhang, Yongchang Lv, Chao Song

Background: Chaperonin containing TCP1 subunit 3 (CCT3) acts as an oncogene in cancers, whereas its role and underlying mechanisms in lung adenocarcinoma (LUAD) are poorly understood. This study investigated the clinical relevance and function of CCT3 in LUAD.

Methods: Clinical relevance of CCT3 in LUAD and lung squamous cell carcinoma (LUSC) was analyzed based on TCGA database. qRT-PCR and Western blot were used to detect mRNA and protein expression, respectively. CCK8 and colony formation were performed to measure cell viability. PI and PI/Annexin V-FITC assay kit was used to determine cell cycle and cell death, respectively. Luciferase activity was performed to check whether CCT3 regulated slc7a11's transcription activity. Ferroptosis was determined by incubating the cells with ferroptosis and apoptosis inducer, their inhibitor and autophagy inhibitor, followed by cell viability examination.

Results: We found that CCT3 was overexpressed in LUAD and LUSC tissues. Overexpression of CCT3 predicted the poor prognosis of LUAD patients. Loss-of-function and gain-of-function experiments demonstrated that CCT3 promoted the proliferation and colony formation of LUAD cells. In addition, CCT3 promoted cell cycle progression and suppressed slc7a11-mediated cell ferroptosis, but not apoptosis. We also found that CCT3 activated AKT. MK2206 significantly reduced the viability of CCT3 overexpressed LUAD cells, while had smaller inhibitory effect on the proliferation of control cells, suggesting that CCT3 dictates the sensitivity of LUAD cells to AKT inhibition.

Conclusion: Our study demonstrates that CCT3 contributes to the proliferation and growth of LUAD cells through inhibition of ferroptosis and activation of AKT.

背景:含有TCP1亚基3 (CCT3)的伴侣蛋白在癌症中作为致癌基因,然而其在肺腺癌(LUAD)中的作用和潜在机制尚不清楚。本研究探讨了CCT3在LUAD中的临床意义和功能。方法:基于TCGA数据库分析CCT3在LUAD和肺鳞状细胞癌(LUSC)中的临床相关性。采用qRT-PCR和Western blot分别检测mRNA和蛋白的表达。CCK8和集落形成测定细胞活力。采用PI和PI/Annexin V-FITC检测试剂盒分别检测细胞周期和细胞死亡。荧光素酶活性检测检测CCT3是否调控slc7a11的转录活性。用凋亡诱导剂、凋亡诱导剂及其抑制剂和自噬抑制剂孵育细胞,检测细胞活力。结果:我们发现CCT3在LUAD和LUSC组织中过表达。CCT3过表达预示LUAD患者预后不良。功能丧失和功能获得实验表明,CCT3促进LUAD细胞的增殖和集落形成。此外,CCT3促进细胞周期进程,抑制slc7a11介导的细胞铁下垂,但不抑制细胞凋亡。我们还发现CCT3激活AKT。MK2206显著降低过表达CCT3的LUAD细胞的活力,而对对照细胞的增殖抑制作用较小,提示CCT3决定了LUAD细胞对AKT抑制的敏感性。结论:我们的研究表明CCT3通过抑制铁下垂和激活AKT来促进LUAD细胞的增殖和生长。
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引用次数: 5
Decreased Krüppel-like factor 4 in adenomyosis impairs decidualization by repressing autophagy in human endometrial stromal cells. 子宫腺肌病患者kr<s:1> ppel样因子4的降低通过抑制人子宫内膜基质细胞的自噬而损害去细胞化。
IF 2.8 3区 生物学 Q3 Biochemistry, Genetics and Molecular Biology Pub Date : 2022-06-27 DOI: 10.1186/s12860-022-00425-6
Jie Mei, Xiaoqiang Sheng, Yuan Yan, Xinyu Cai, Chunxue Zhang, Jiao Tian, Mei Zhang, Jidong Zhou, Huizhi Shan, Chenyang Huang

Background: Poor decidualization and abnormal autophagy conditions in the endometria of adenomyosis patients have been reported previously. However, the specific regulatory mechanism of decidualization in adenomyosis and its relationship with autophagy levels have not been clarified.

Methods: Endometrial tissues from adenomyosis patients and uteri from an adenomyosis mouse model were collected for the detection of different expression patterns of KLF4 and autophagy markers (LC3-B/LC3-A and Beclin-1) compared with control groups. Human endometrial stromal cells (hESCs) isolated from adenomyosis and control endometrial tissues were employed to elucidate the biological functions of KLF4 in autophagy and decidualization. Gene expression regulation was examined by quantitative real-time PCR (qRT-PCR), western blotting and luciferase reporter assays. In addition, DNA promoter-protein interactions were examined by chromatin immunoprecipitation (ChIP)/PCR assay and avidin-biotin conjugate DNA precipitation (ABCD) assay.

Results: KLF4 expression was decreased in endometrial tissues from adenomyosis patients compared with those from fertile controls, especially in stromal compartments. The opposite results were observed for autophagy marker (LC3-B/LC3-A and Beclin-1) expression. At the same time, KLF4 reversed the poor decidualization of hESCs from adenomyosis patients. In addition, KLF4 could induce hESC decidualization by promoting the autophagy level. Mechanistically, KLF4 bound to a conserved site in the autophagy-related 5 (ATG5) promoter region and promoted ATG5 expression. Similar expression patterns of KLF4 and autophagy markers were detected in adenomyotic mice.

Conclusions: KLF4 overexpression increases the autophagy level of hESCs by transcriptionally promoting ATG5 expression, and abnormally decreased KLF4 in adenomyosis impairs hESC decidualization by repressing autophagy.

背景:子宫腺肌症患者子宫内膜脱细胞不良和自噬异常的情况已有报道。然而,子宫腺肌症中去体细胞化的具体调控机制及其与自噬水平的关系尚不清楚。方法:取子宫腺肌症患者子宫内膜组织和子宫腺肌症小鼠模型,与对照组比较,检测KLF4和自噬标志物(LC3-B/LC3-A、Beclin-1)的不同表达模式。利用从子宫腺肌病和对照子宫内膜组织中分离的人子宫内膜基质细胞(hESCs)来阐明KLF4在自噬和去细胞化中的生物学功能。采用实时荧光定量PCR (qRT-PCR)、western blotting和荧光素酶报告基因检测检测基因表达调控。此外,采用染色质免疫沉淀(ChIP)/PCR法和亲和素-生物素结合DNA沉淀(ABCD)法检测DNA启动子与蛋白质的相互作用。结果:子宫腺肌症患者的子宫内膜组织中KLF4的表达明显低于生育对照组,尤其是间质室。自噬标志物(LC3-B/LC3-A和Beclin-1)的表达则相反。同时,KLF4逆转了子宫腺肌症患者hESCs的去细胞化不良。此外,KLF4可通过提高自噬水平诱导hESC去个性化。从机制上讲,KLF4结合自噬相关5 (ATG5)启动子区域的一个保守位点,促进ATG5的表达。在腺肌病小鼠中检测到相似的KLF4和自噬标记物的表达模式。结论:KLF4过表达通过转录促进ATG5表达增加hESCs的自噬水平,而腺肌病患者KLF4异常降低通过抑制自噬损害hESC的去细胞化。
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引用次数: 3
Evaluation of the putative lymphoma-associated point mutation D427H in the STAT3 transcription factor. STAT3转录因子中疑似淋巴瘤相关点突变D427H的评估。
IF 2.8 3区 生物学 Q3 Biochemistry, Genetics and Molecular Biology Pub Date : 2022-06-25 DOI: 10.1186/s12860-022-00422-9
Lena Sophie Behrendsen, Priyanka Rajeev Menon, Muhammad Jawad Khan, Anke Gregus, Oliver Wirths, Thomas Meyer, Julia Staab

Background: Signal transducer and activator of transcription 3 (STAT3) is an oncogenic transcription factor that promotes cell proliferation and immunomodulation in untransformed cells and maintains stemness of transformed cells, facilitating invasion and metastasis. Numerous point mutations in the STAT3 protein have been identified that drive malignancy in various tumor entities. The missense mutation D427H localized in the STAT3 DNA-binding domain has been previously reported in patients with NK/T cell lymphomas. To assess the biological activity of this missense mutation, we compared the STAT3-D427H mutant to wild-type (WT) protein as well as the known hyper-active mutant F174A.

Results: Although previously reported as an activating mutation, the STAT3-D427H mutant neither showed elevated cytokine-induced tyrosine phosphorylation nor altered nuclear accumulation, as compared to the WT protein. However, the D427H mutant displayed enhanced binding to STAT-specific DNA-binding sites but a reduced sequence specificity and dissociation rate from DNA, which was demonstrated by electrophoretic mobility shift assays. This observation is consistent with the phenotype of the homologous E421K mutation in the STAT1 protein, which also displayed enhanced binding to DNA but lacked a corresponding increase in transcriptional activity.

Conclusions: Based on our data, it is unlikely that the D427H missense mutation in the STAT3 protein possesses an oncogenic potential beyond the WT molecule.

背景:STAT3 (Signal transducer and activator of transcription 3)是一种促癌转录因子,在未转化细胞中促进细胞增殖和免疫调节,维持转化细胞的干性,促进侵袭和转移。STAT3蛋白中的许多点突变已被确定在各种肿瘤实体中驱动恶性肿瘤。STAT3 dna结合域的错义突变D427H在NK/T细胞淋巴瘤患者中已有报道。为了评估这种错义突变的生物活性,我们将STAT3-D427H突变体与野生型(WT)蛋白以及已知的高活性突变体F174A进行了比较。结果:与WT蛋白相比,STAT3-D427H突变体既没有表现出细胞因子诱导的酪氨酸磷酸化升高,也没有表现出核积累的改变。然而,D427H突变体与stat特异性DNA结合位点的结合增强,但序列特异性和DNA解离率降低,这一点通过电泳迁移转移实验得到了证实。这一观察结果与STAT1蛋白中同源E421K突变的表型一致,后者也显示出与DNA的结合增强,但转录活性缺乏相应的增加。结论:根据我们的数据,STAT3蛋白中的D427H错义突变不太可能具有WT分子以外的致癌潜力。
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引用次数: 0
OSGIN2 regulates osteogenesis of jawbone BMSCs in osteoporotic rats. OSGIN2对骨质疏松大鼠颌骨间充质干细胞成骨的调控作用。
IF 2.8 3区 生物学 Q3 Biochemistry, Genetics and Molecular Biology Pub Date : 2022-06-21 DOI: 10.1186/s12860-022-00423-8
Yi Shuai, Bingyao Liu, Liang Rong, Bingyi Shao, Bo Chen, Lei Jin

Background: Augmentation of oxidative stress after estrogen deficiency leading to functional deficiency of jawbone bone marrow mesenchymal stem cells (BMSCs) causes jawbone loss in osteoporosis. OSGIN2, an oxidative stress induced factor, has been found to be associated with skeletal diseases. This study aims to investigate the function of OSGIN2 in jawbone BMSCs of osteoporotic rats. Jawbone BMSCs were used.

Results: Oxidative stress was increased in jawbone BMSCs of osteoporotic rats, meanwhile OSGIN2 was also up-regulated. Osteogenesis of jawbone BMSCs was declined under oxidative stress, while silence of OSGIN2 ameliorated the osteogenic deficiency. RORα and its downstream osteogenic markers (BSP and OCN) decreased under oxidative stress, while knocking-down of OSGIN2 restored their expressions. Inhibition of OSGIN2 improved the osteogenesis of jawbone BMSCs under oxidative stress, whereas down-regulation of RORα offset the effect. Intra-jawbone infusion of si-OSGIN2 rescued jawbone loss and promoted new bone deposition of osteoporotic rats.

Conclusions: Oxidative stress is redundant in osteoporosis, which results in up-regulation of OSGIN2. OSGIN2 restricts osteogenic ability of jawbone BMSCs via regulating RORα, while silencing of OSGIN2 rescues the osteogenic deficiency of osteoporotic rats.

背景:雌激素缺乏后氧化应激增强导致颌骨骨髓间充质干细胞(BMSCs)功能不足,导致骨质疏松症患者颌骨丢失。OSGIN2是一种氧化应激诱导因子,被发现与骨骼疾病有关。本研究旨在探讨OSGIN2在骨质疏松大鼠颌骨间充质干细胞中的作用。使用颌骨骨髓间充质干细胞。结果:骨质疏松大鼠颌骨骨髓间充质干细胞氧化应激升高,OSGIN2表达上调。氧化应激导致颌骨骨髓间充质干细胞成骨能力下降,而沉默OSGIN2可改善成骨缺陷。氧化应激下,rora及其下游成骨标志物(BSP、OCN)表达降低,而OSGIN2下调后,其表达恢复。抑制OSGIN2可促进氧化应激下颌骨BMSCs的成骨,而下调RORα可抵消这一作用。骨内灌注si-OSGIN2可挽救骨质疏松大鼠颌骨缺损,促进新骨沉积。结论:氧化应激在骨质疏松症中是冗余的,导致OSGIN2上调。OSGIN2通过调控RORα抑制颌骨骨髓间充质干细胞成骨能力,而OSGIN2沉默可缓解骨质疏松大鼠成骨缺陷。
{"title":"OSGIN2 regulates osteogenesis of jawbone BMSCs in osteoporotic rats.","authors":"Yi Shuai,&nbsp;Bingyao Liu,&nbsp;Liang Rong,&nbsp;Bingyi Shao,&nbsp;Bo Chen,&nbsp;Lei Jin","doi":"10.1186/s12860-022-00423-8","DOIUrl":"https://doi.org/10.1186/s12860-022-00423-8","url":null,"abstract":"<p><strong>Background: </strong>Augmentation of oxidative stress after estrogen deficiency leading to functional deficiency of jawbone bone marrow mesenchymal stem cells (BMSCs) causes jawbone loss in osteoporosis. OSGIN2, an oxidative stress induced factor, has been found to be associated with skeletal diseases. This study aims to investigate the function of OSGIN2 in jawbone BMSCs of osteoporotic rats. Jawbone BMSCs were used.</p><p><strong>Results: </strong>Oxidative stress was increased in jawbone BMSCs of osteoporotic rats, meanwhile OSGIN2 was also up-regulated. Osteogenesis of jawbone BMSCs was declined under oxidative stress, while silence of OSGIN2 ameliorated the osteogenic deficiency. RORα and its downstream osteogenic markers (BSP and OCN) decreased under oxidative stress, while knocking-down of OSGIN2 restored their expressions. Inhibition of OSGIN2 improved the osteogenesis of jawbone BMSCs under oxidative stress, whereas down-regulation of RORα offset the effect. Intra-jawbone infusion of si-OSGIN2 rescued jawbone loss and promoted new bone deposition of osteoporotic rats.</p><p><strong>Conclusions: </strong>Oxidative stress is redundant in osteoporosis, which results in up-regulation of OSGIN2. OSGIN2 restricts osteogenic ability of jawbone BMSCs via regulating RORα, while silencing of OSGIN2 rescues the osteogenic deficiency of osteoporotic rats.</p>","PeriodicalId":9099,"journal":{"name":"BMC Molecular and Cell Biology","volume":null,"pages":null},"PeriodicalIF":2.8,"publicationDate":"2022-06-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9215015/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"40164232","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 1
RNAP II produces capped 18S and 25S ribosomal RNAs resistant to 5′-monophosphate dependent processive 5′ to 3′ exonuclease in polymerase switched Saccharomyces cerevisiae 在聚合酶开关的酿酒酵母中,RNAP II产生抗5 ' -单磷酸依赖的5 '到3 '过程核酸外切酶的18S和25S核糖体rna
IF 2.8 3区 生物学 Q3 Biochemistry, Genetics and Molecular Biology Pub Date : 2022-04-10 DOI: 10.1186/s12860-022-00417-6
Miguel A. Rocha, B. S. Gowda, J. Fleischmann
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引用次数: 0
Identification of critical residues of O-antigen-modifying O-acetyltransferase B (OacB) of Shigella flexneri. 福氏志贺氏菌o抗原修饰o乙酰转移酶B (OacB)关键残基鉴定
IF 2.8 3区 生物学 Q3 Biochemistry, Genetics and Molecular Biology Pub Date : 2022-03-24 DOI: 10.1186/s12860-022-00415-8
Munazza I Rajput, Naresh K Verma

Background: Shigellosis is an acute gastrointestinal disease caused primarily by the bacterium Shigella flexneri. Upon ingestion, S. flexneri initiates a serotype-specific immune response that targets the O-antigen of the pathogen's lipopolysaccharide. O-antigen subunits are modified by the addition of chemical moieties, which give rise to new serotypes of S. flexneri. Nineteen different serotypes of S. flexneri have been recognized. A recently identified O-antigen-modifying enzyme, O-acetyltransferase B (OacB), which adds an acetyl residue at either position 3 or 4 of RhamnoseIII (3/4-O-acetylation) in serotypes 1a, 1b, 2a, 5a, 7a, Y, and 6 and position 6 of N- acetylglucosamine (6-O-acetylation) in serotypes 2a, 3a, Y and Yv of the O-antigen subunits. Critical residues in other proteins involved in O-antigen modifications such as glucosyltransferases (Gtrs) and acetyltransferase (Oac) of S. flexneri have been identified, whereas identification of important amino acids in OacB function is yet to be determined.

Results: Hydrophobicity analysis showed that OacB is a transmembrane protein with 11 transmembrane segments, 12 loops, and periplasmic N- and cytoplasmic C- termini. Bioinformatics analyses revealed that OacB contains acetyltransferase-3 domain and several conserved residues. Using site-directed mutagenesis, selected amino acids were mutated to alanine to elucidate their role in the mechanism of action of OacB. Seven amino acids R47, H58, F98, W71, R116, R119, and S146 were found critical for the OacB function.

Conclusion: In the absence of a three-dimensional structure of the serotype converting enzyme, O-acetyltransferase B (OacB), a clear role of important residues in the mechanism of action is precluded. Therefore, in this study, using site-directed mutagenesis, seven residues critical to the function of OacB were identified. The lack of agglutination of cell expressing mutant OacB in the presence of the antiserum indicated the functional role of the corresponding residues. Hence, this study provides significant information about key residues in OacB which might be involved in forming the catalytic sites of this O-antigen modifying enzyme of S. flexneri.

背景:志贺氏菌病是一种主要由福氏志贺氏菌引起的急性胃肠道疾病。摄入后,福氏沙门氏菌启动血清型特异性免疫反应,目标是病原体脂多糖的o抗原。o抗原亚基通过添加化学部分进行修饰,从而产生新的弗氏沙门氏菌血清型。已经确认了19种不同的弗氏沙门氏菌血清型。最近发现了o抗原修饰酶o -乙酰转移酶B (OacB),它在血清型1a、1b、2a、5a、7a、Y和6的鼠李糖iii的3或4位(3/4- o -乙酰化)和血清型2a、3a、Y和Yv的N-乙酰氨基葡萄糖的6位(6- o -乙酰化)上添加乙酰基残基。其他参与o抗原修饰的蛋白如葡萄糖基转移酶(Gtrs)和乙酰基转移酶(Oac)的关键残基已经被确定,而OacB功能的重要氨基酸的鉴定尚未确定。结果:疏水性分析表明,OacB是一种跨膜蛋白,具有11个跨膜节段,12个环,胞质周围N-和胞质C-端。生物信息学分析表明,OacB含有乙酰转移酶-3结构域和几个保守残基。利用定点诱变技术,将选择的氨基酸突变为丙氨酸,以阐明其在OacB作用机制中的作用。发现7个氨基酸R47、H58、F98、W71、R116、R119和S146对oach功能至关重要。结论:由于缺乏血清型转换酶o -乙酰转移酶B (OacB)的三维结构,排除了重要残基在作用机制中的明确作用。因此,在本研究中,使用定点诱变技术,鉴定了7个对OacB功能至关重要的残基。在抗血清存在的情况下,表达OacB突变体的细胞缺乏凝集,表明相应残基的功能作用。因此,该研究提供了可能参与形成flexneri o抗原修饰酶催化位点的OacB关键残基的重要信息。
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引用次数: 1
The absence of the autoimmune regulator gene (AIRE) impairs the three-dimensional structure of medullary thymic epithelial cell spheroids. 自身免疫调节基因(AIRE)的缺失会损害胸腺髓样上皮细胞球体的三维结构。
IF 2.8 3区 生物学 Q3 Biochemistry, Genetics and Molecular Biology Pub Date : 2022-03-24 DOI: 10.1186/s12860-022-00414-9
Ana Carolina Monteleone-Cassiano, Janaina A Dernowsek, Romario S Mascarenhas, Amanda Freire Assis, Dimitrius Pitol, Natalia Chermont Santos Moreira, Elza Tiemi Sakamoto-Hojo, João Paulo Mardegan Issa, Eduardo A Donadi, Geraldo Aleixo Passos

Background: Besides controlling the expression of peripheral tissue antigens, the autoimmune regulator (AIRE) gene also regulates the expression of adhesion genes in medullary thymic epithelial cells (mTECs), an essential process for mTEC-thymocyte interaction for triggering the negative selection in the thymus. For these processes to occur, it is necessary that the medulla compartment forms an adequate three-dimensional (3D) architecture, preserving the thymic medulla. Previous studies have shown that AIRE knockout (KO) mice have a small and disorganized thymic medulla; however, whether AIRE influences the mTEC-mTEC interaction in the maintenance of the 3D structure has been little explored. Considering that AIRE controls cell adhesion genes, we hypothesized that this gene affects 3D mTEC-mTEC interaction. To test this, we constructed an in vitro model system for mTEC spheroid formation, in which cells adhere to each other, establishing a 3D structure.

Results: The comparisons between AIRE wild type (AIREWT) and AIRE KO (AIRE-/-) 3D mTEC spheroid formation showed that the absence of AIRE: i) disorganizes the 3D structure of mTEC spheroids, ii) increases the proportion of cells at the G0/G1 phase of the cell cycle, iii) increases the rate of mTEC apoptosis, iv) decreases the strength of mTEC-mTEC adhesion, v) promotes a differential regulation of mTEC classical surface markers, and vi) modulates genes encoding adhesion and other molecules.

Conclusions: Overall, the results show that AIRE influences the 3D structuring of mTECs when these cells begin the spheroid formation through controlling cell adhesion genes.

背景:自身免疫调节因子(AIRE)基因除了控制外周组织抗原的表达外,还调节胸腺髓质上皮细胞(mTECs)中粘附基因的表达,这是mTECs与胸腺细胞相互作用触发胸腺负选择的重要过程。为了使这些过程发生,髓质隔室必须形成足够的三维(3D)结构,以保存胸腺髓质。先前的研究表明AIRE基因敲除(KO)小鼠胸腺髓质小且紊乱;然而,AIRE是否会影响mTEC-mTEC在三维结构维持中的相互作用却很少被探讨。考虑到AIRE控制细胞粘附基因,我们假设该基因影响3D mTEC-mTEC相互作用。为了验证这一点,我们构建了mTEC球体形成的体外模型系统,其中细胞相互粘附,建立了三维结构。结果:AIRE野生型(AIREWT)和AIRE KO (AIRE-/-) 3D mTEC球体形成的比较表明,AIRE的缺失:i)破坏了mTEC球体的3D结构,ii)增加了细胞周期G0/G1期的细胞比例,iii)增加了mTEC的凋亡率,iv)降低了mTEC-mTEC的粘附强度,v)促进了mTEC经典表面标记的差异调节,vi)调节了编码粘附等分子的基因。结论:总体而言,结果表明AIRE通过控制细胞粘附基因影响mTECs细胞开始球体形成时的三维结构。
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引用次数: 0
High miRNA-378 expression has high diagnostic values for pulmonary tuberculosis and predicts adverse outcomes. miRNA-378 的高表达对肺结核具有很高的诊断价值,并可预测不良后果。
IF 2.4 3区 生物学 Q4 CELL BIOLOGY Pub Date : 2022-03-19 DOI: 10.1186/s12860-022-00413-w
Xiaolu Sun, Kai Liu, Yan Zhao, Tianhua Zhang

Background: Pulmonary tuberculosis (TB) is a chronic infectious disease. microRNA (miR)-378 is involved in TB diagnosis. This study explored the effects of miR-378 on TB patients.

Methods: A total of 126 TB patients were selected, including 63 active TB and 63 latent TB, with 62 healthy subjects as controls. Serum miR-378 expression was detected. The diagnostic value of miR-378 in TB was analyzed using the ROC curve. Immune inflammatory factor levels were detected and their correlations with miR-378 expression were analyzed. The drug resistance of active TB patients was recorded after standard treatment. miR-378 expression in drug-resistant TB patients was detected. The effects of miR-378 on adverse outcome incidence were analyzed.

Results: miR-378 expression was highly expressed in TB and the expression was higher in the active group than the latent group. Serum miR-378 expression > 1.490 had high sensitivity and specificity in TB diagnosis. miR-378 expression was correlated with TB clinical indexes. IL-4, IL-6, and IL-1β levels were highly expressed, while IFN-γ, TNF-α, and IL-12 levels were lowly expressed in TB patients. Serum miR-378 level in the active group was positively correlated with serum IL-4, IL-6, and IL-1β, and negatively correlated with serum IFN-γ, TNF-α, and IL-12 concentrations. miR-378 expression was downregulated in the TB treated, single (SDR TB) and multi-drug resistance (MDR TB) groups, the miR-378 expression in SDR TB and MDR TB groups was higher than the TB treated group and lower in the SDR TB group than the MDR TB group. High miR-378 expression predicted higher adverse outcome incidence.

Conclusions: High miR-378 expression assisted TB diagnosis and predicted adverse outcomes.

背景:肺结核(TB)是一种慢性传染病:肺结核(TB)是一种慢性传染病,microRNA(miR)-378参与TB的诊断。本研究探讨了 miR-378 对肺结核患者的影响:方法:共选取了 126 名肺结核患者,包括 63 名活动性肺结核患者和 63 名潜伏肺结核患者,并以 62 名健康人作为对照。检测血清中 miR-378 的表达。利用 ROC 曲线分析了 miR-378 在结核病中的诊断价值。检测了免疫炎症因子水平,并分析了它们与 miR-378 表达的相关性。记录了活动性肺结核患者在标准治疗后的耐药性,并检测了耐药肺结核患者中 miR-378 的表达。结果:miR-378 在结核病中高表达,活动组的表达高于潜伏组。血清 miR-378 表达 > 1.490 对肺结核诊断有较高的敏感性和特异性。结核病患者的 IL-4、IL-6 和 IL-1β 水平表达较高,而 IFN-γ、TNF-α 和 IL-12 水平表达较低。活动组血清 miR-378 水平与血清 IL-4、IL-6 和 IL-1β 呈正相关,与血清 IFN-γ、TNF-α 和 IL-12 浓度呈负相关。在结核病治疗组、单药耐药组(SDR TB)和多药耐药组(MDR TB)中,miR-378 表达下调,SDR TB 和 MDR TB 组的 miR-378 表达高于结核病治疗组,SDR TB 组低于 MDR TB 组。高miR-378表达预示着较高的不良结局发生率:结论:miR-378 的高表达有助于结核病的诊断并预测不良结局。
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引用次数: 0
Systemic administration of c-Kit+ cells diminished pulmonary and vascular inflammation in rat model of chronic asthma. 在慢性哮喘大鼠模型中,全身给药 c-Kit+ 细胞可减轻肺部和血管炎症。
IF 2.4 3区 生物学 Q4 CELL BIOLOGY Pub Date : 2022-02-24 DOI: 10.1186/s12860-022-00410-z
Sajjad Taghizadeh, Rana Keyhanmanesh, Reza Rahbarghazi, Jafar Rezaie, Aref Delkhosh, Mehdi Hassanpour, Hossein Heiran, Arshad Ghaffari-Nasab, Mahdi Ahmadi

Background: To circumvent some pitfalls related to acute status, chronic model of asthma is conceived to be more suitable approach to guarantee the conditions which are similar to human pulmonary disease. Here, possible therapeutic mechanisms were monitored by which c-kit+ bone marrow cells can attenuate vascular inflammation in rat model of chronic asthma.

Results: Data revealed c-Kit+ cells could significantly reduce pathological injures in asthmatic rats via modulating the expression of IL-4, INF-γ, ICAM-1 and VCAM-1 in lung tissues and TNF-α, IL-1β and NO levels in BALF (p < 0.001 to p < 0.05). Besides, c-Kit+ cells reduced increased levels of VCAM-1 evaluated by immunohistochemistry staining. In contrast to c-Kit+ cells, c-Kit- cells could not exert beneficial effects in the asthmatic conditions.

Conclusion: Overall, we found that systemic administration of C-kit positive cells can diminish pulmonary and vascular inflammation of chronic asthmatic changes in a rat model. These cells are eligible to suppress inflammation and nitrosative stress in lung tissue coincides with the reduction of pathological changes. These data indicate that C-kit positive cells be used as an alternative cell source for the amelioration of asthmatic changes.

背景:为了避免与急性状态相关的一些缺陷,慢性哮喘模型被认为是更适合的方法,以保证与人类肺部疾病相似的条件。本文研究了 c-kit+ 骨髓细胞在慢性哮喘大鼠模型中减轻血管炎症的可能治疗机制:结果:数据显示,c-Kit+细胞可通过调节肺组织中IL-4、INF-γ、ICAM-1和VCAM-1的表达以及BALF中TNF-α、IL-1β和NO的水平,显著减轻哮喘大鼠的病理损伤。与 c-Kit+ 细胞相反,c-Kit- 细胞不能对哮喘患者产生有益影响:总之,我们发现在大鼠模型中,全身给药 C-kit 阳性细胞可减轻慢性哮喘病变的肺部和血管炎症。这些细胞有资格抑制肺组织中的炎症和亚硝酸应激,与病理变化的减少相吻合。这些数据表明,C-kit 阳性细胞可用作改善哮喘病变的替代细胞来源。
{"title":"Systemic administration of c-Kit<sup>+</sup> cells diminished pulmonary and vascular inflammation in rat model of chronic asthma.","authors":"Sajjad Taghizadeh, Rana Keyhanmanesh, Reza Rahbarghazi, Jafar Rezaie, Aref Delkhosh, Mehdi Hassanpour, Hossein Heiran, Arshad Ghaffari-Nasab, Mahdi Ahmadi","doi":"10.1186/s12860-022-00410-z","DOIUrl":"10.1186/s12860-022-00410-z","url":null,"abstract":"<p><strong>Background: </strong>To circumvent some pitfalls related to acute status, chronic model of asthma is conceived to be more suitable approach to guarantee the conditions which are similar to human pulmonary disease. Here, possible therapeutic mechanisms were monitored by which c-kit<sup>+</sup> bone marrow cells can attenuate vascular inflammation in rat model of chronic asthma.</p><p><strong>Results: </strong>Data revealed c-Kit<sup>+</sup> cells could significantly reduce pathological injures in asthmatic rats via modulating the expression of IL-4, INF-γ, ICAM-1 and VCAM-1 in lung tissues and TNF-α, IL-1β and NO levels in BALF (p < 0.001 to p < 0.05). Besides, c-Kit<sup>+</sup> cells reduced increased levels of VCAM-1 evaluated by immunohistochemistry staining. In contrast to c-Kit<sup>+</sup> cells, c-Kit<sup>-</sup> cells could not exert beneficial effects in the asthmatic conditions.</p><p><strong>Conclusion: </strong>Overall, we found that systemic administration of C-kit positive cells can diminish pulmonary and vascular inflammation of chronic asthmatic changes in a rat model. These cells are eligible to suppress inflammation and nitrosative stress in lung tissue coincides with the reduction of pathological changes. These data indicate that C-kit positive cells be used as an alternative cell source for the amelioration of asthmatic changes.</p>","PeriodicalId":9099,"journal":{"name":"BMC Molecular and Cell Biology","volume":null,"pages":null},"PeriodicalIF":2.4,"publicationDate":"2022-02-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8876378/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"39819559","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
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