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Thermal performance of native and invasive crab species: investigating the invasion potential of Hemigrapsus takanoi in southern European Carcinus maenas’ habitats 本地蟹种和外来蟹种的热性能:研究南欧鲎栖息地中 Hemigrapsus takanoi 的入侵潜力
IF 2.9 3区 环境科学与生态学 Q1 BIODIVERSITY CONSERVATION Pub Date : 2024-08-02 DOI: 10.1007/s10530-024-03396-1
L. D. Rato, T. Simões, S. C. Novais, J. M. Damasceno, J. Van der Meer, D. W. Thieltges, J. C. Marques, M. F. L. Lemos

Invasive species’ plasticity and latitudinal spread have become an increasing matter of concern in rapidly changing climate. The brush-clawed shore crab (Hemigrapsus takanoi), native along northwestern Pacific shores, has established dense populations in northern European coasts. Detrimental effects in natura have been reported, such as displacement of native species and competition for shelter, rasing concerns regarding shellfish early life stages and food webs-posing a threat to wild stocks’ recruitment and aquaculture. The species has not yet been observed in southern European countries (e.g., Portugal), where niche habitats such as harbours, mudflats, and lagoons reach higher temperatures than the invaded northern range. The aims of this study were to determine H. takanoi potential to acclimate to a southern thermal range, assess thermal performance, and identify potential competitive advantages over the native shore crab Carcinus maenas. This was accomplished through individual exposure to one of three treatments, resembling a southern European thermal range (17 °C, 21 °C, or 25 °C), for 30 days. H. takanoi thrived in temperatures as high as 25 °C, a realistic thermal scenario in Óbidos Lagoon (the biggest Portuguese lagoon)—while the native shore crab C. maenas underperformed at that treatment, showing lower survival, growth, and feed intake than H. takanoi. These results suggest that H. takanoi may be able to colonise southern and warmer European locations and have higher plasticity than the native species already inhabiting areas close to its upper thermal limits. Under global warming scenarios, inferences of further latitudinal spread and increased invaded range may also be taken to the invaded northern European habitats.

在气候迅速变化的情况下,入侵物种的可塑性和纬度扩散已成为一个日益令人担忧的问题。原产于西北太平洋海岸的刷螯蟹(Hemigrapsus takanoi)已在北欧海岸建立了密集的种群。据报道,该物种对自然环境造成了有害影响,如本地物种的迁移和对栖息地的竞争,引起了人们对贝类早期生命阶段和食物网的关注--这对野生种群的繁殖和水产养殖构成了威胁。在南欧国家(如葡萄牙)尚未观察到该物种,那里的港口、泥滩和泻湖等利基栖息地的温度要高于入侵的北部地区。本研究的目的是确定 H. takanoi 适应南方热范围的潜力,评估其热性能,并确定与本地岸蟹 Carcinus maenas 相比的潜在竞争优势。这项研究通过将个体暴露在类似欧洲南部热范围(17 °C、21 °C或25 °C)的三种处理之一中30天来实现。H. takanoi在高达25 °C的温度下茁壮成长,这是Óbidos泻湖(葡萄牙最大的泻湖)的实际热量情况,而本地岸蟹C. maenas在该温度下表现不佳,存活率、生长和摄食量均低于H. takanoi。这些结果表明,H. takanoi可能能够在欧洲南部和更温暖的地区定居,并且比已经栖息在接近其热量上限地区的本地物种具有更高的可塑性。在全球变暖的情况下,受入侵的北欧栖息地也可能会出现进一步的纬度扩散和入侵范围扩大。
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引用次数: 0
Human activity-associated establishment of invasive mink population estimated using environmental DNA 利用环境 DNA 估算与人类活动相关的入侵水貂种群的建立情况
IF 2.9 3区 环境科学与生态学 Q1 BIODIVERSITY CONSERVATION Pub Date : 2024-07-31 DOI: 10.1007/s10530-024-03407-1
Toshihiro Takaba, Masayuki K. Sakata, Takashi Kanbe, Takashi Mitsuzuka, Shouko Inoue, Hiroki Mizumoto, Takahiro Nobetsu, Hitoshi Araki

Invasive species are one of the most significant factors affecting biodiversity. American mink (Neovison vison) was introduced to Hokkaido, Japan, and is known to compete with other medium-sized mammals and prey on freshwater fish. Therefore, it is important to understand their distribution and the types of environments they prefer. We developed an N. vison-specific environmental DNA (eDNA) detection assay to estimate their distribution. Applying this assay to water samples from 48 rivers in the Shiretoko Peninsula, the World Natural Heritage site in Hokkaido, N. vison-specific DNA was identified in 10 rivers. Including seven rivers from a previous study on N. vision distribution in the peninsula, the environmental characteristics of the 17 rivers with the potential establishment of N. vison populations were investigated using a generalized linear model. The evaluated environmental factors included eDNA concentrations of two salmonid species (Salvelinus curilus and Oncorhynchus masou, potential food resources for N. vison), the presence of salmon hatchery and release programs, land uses around the rivers, and river structures. While the estimated N. vison distribution did not show a clear association with the eDNA concentrations of the two salmonid species, it showed positive and significant associations with the salmon release programs (p = 0.031) and with the proportion of farmland (p = 0.034). These findings imply that human activities have the potential not only to cause the introduction of invasive species but also unintentionally to contribute to the establishment of such species in new environments.

入侵物种是影响生物多样性的最重要因素之一。美洲水貂(Neovison vison)被引入日本北海道,已知会与其他中型哺乳动物竞争,并捕食淡水鱼。因此,了解它们的分布及其喜欢的环境类型非常重要。我们开发了一种N. vison特异性环境DNA(eDNA)检测方法来估计它们的分布。通过对北海道知床半岛(世界自然遗产)48条河流的水样进行检测,我们在10条河流中鉴定出了粘子鱼的特异性DNA。利用广义线性模型研究了17条河流的环境特征,其中7条河流来自之前对半岛上的视觉鲑分布情况的研究。评估的环境因素包括两种鲑鱼物种(Salvelinus curilus 和 Oncorhynchus masou,N. vison 的潜在食物资源)的 eDNA 浓度、鲑鱼孵化和放流计划的存在、河流周围的土地利用以及河流结构。虽然估计的粘蝇分布与两种鲑鱼的 eDNA 浓度没有明显关联,但与鲑鱼放流计划(p = 0.031)和农田比例(p = 0.034)呈显著正相关。这些研究结果表明,人类活动不仅有可能导致入侵物种的引入,也有可能无意中促成这些物种在新环境中的建立。
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引用次数: 0
Genetic and morphological characterization of invasive tilapia in Morocco confirm the presence of two feral species Oreochromis niloticus (Linnaeus, 1758) and Oreochromis aureus (Steindachner, 1864) and their hybrids 摩洛哥入侵罗非鱼的遗传和形态特征确认了两个野外物种 Oreochromis niloticus (Linnaeus, 1758) 和 Oreochromis aureus (Steindachner, 1864) 及其杂交种的存在
IF 2.9 3区 环境科学与生态学 Q1 BIODIVERSITY CONSERVATION Pub Date : 2024-07-30 DOI: 10.1007/s10530-024-03395-2
Hala Ainou, Julien Claude, Halima Louizi, Antoine Pariselle, Abdelaziz Benhoussa, Ouafae Berrada Rkhami, Jean-François Agnèse

Two tilapia species, Oreochromis aureus and Oreochromis niloticus, were introduced into Morocco in 2004 for fish farming. O. niloticus was subsequently introduced into the wild in several watersheds. During a fish survey at six locations, we observed other specimens of tilapia that appear to be more related to O. aureus. Partial sequences of COI and S7 genes and geometric morphometrics were used to assess the specific status of all the specimens. Out of 1691 specimens sampled, 159 COI and 153 S7 partial sequences were obtained and confirmed the presence of both species. O. aureus was present in part of Rabat-Salé-Kenitra region (the Nador Channel (NC), Al Kansra dam (AK) and Oued Sebou (OS)) while O. niloticus was found in the fish farm (AS), in the province of Rabat (Sidi Mohamed Ben Abdellah dam (BA)) and the region of Casablanca-Settat (Al Massira dam (AM)). A few hybrids were identified at AS and OS. Body shapes and sizes were assessed using geometric morphometrics with 18 landmarks and were found to differ significantly between O. aureus and O. niloticus. Both species exhibited significantly different allometric changes during their growth, but kept their morphological signature independently of their specific allometric changes during growth. Specimens from riverine environments (OS, NC) had a similar shape with an elongated body with a large head and eye, while individuals found in lacustrine environments (AK, AM and BM) had a larger body depth, small head and eye. Morphometrics also suggested that hybrids or sympatry could occur to a small extent in AS, OS and NC.

2004 年,摩洛哥引进了两个罗非鱼品种:金目罗非鱼和尼罗罗非鱼,用于养鱼。随后,O. niloticus 被引入多个流域的野外。在六个地点的鱼类调查中,我们观察到其他罗非鱼标本似乎与 O. aureus 亲缘关系更近。我们利用 COI 和 S7 基因的部分序列以及几何形态计量学来评估所有标本的具体状况。在采样的 1691 个标本中,获得了 159 个 COI 和 153 个 S7 部分序列,证实了这两个物种的存在。O. aureus存在于拉巴特-萨莱-凯尼特拉地区的部分区域(纳多尔海峡(NC)、Al Kansra水坝(AK)和Oued Sebou(OS)),而O. niloticus则存在于养鱼场(AS)、拉巴特省(Sidi Mohamed Ben Abdellah水坝(BA))和卡萨布兰卡-塞塔特地区(Al Massira水坝(AM))。在 AS 和 OS 发现了一些杂交种。使用 18 个地标进行几何形态计量学评估,发现金黄裸鲤和尼罗河裸鲤的体形和大小差异显著。这两个物种在生长过程中表现出明显不同的异速变化,但在生长过程中保持了各自的形态特征,而不受其特定异速变化的影响。来自河流环境(OS、NC)的标本具有相似的体型,身体细长,头大眼小,而在湖泊环境(AK、AM 和 BM)中发现的个体体型较大,头小眼小。形态计量学还表明,在 AS、OS 和 NC 中可能会出现小范围的杂交或同源现象。
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引用次数: 0
Intraoceanic and interoceanic dispersal of a marine invader: revealing an invasion in two ocean basins 海洋入侵者的大洋内和大洋间扩散:揭示两个大洋盆地的入侵情况
IF 2.9 3区 环境科学与生态学 Q1 BIODIVERSITY CONSERVATION Pub Date : 2024-07-30 DOI: 10.1007/s10530-024-03385-4
Larissa Bettcher, Jan Vicente, Emily Rutkowski, Tamí Mott, Ulisses Pinheiro, Eduardo Hajdu, André Bispo

Recent collection efforts along the Brazilian coast revealed a Haliclona species preliminarily identified as a likely new species. However, sequencing of the 28S rRNA C-Region, a barcode marker in sponges, showed its high genetic similarity with a Haliclona sp. from Hawaiʻi (GenBank MW016137–MW016139). We applied an integrated morphological and molecular assessment, which allowed us to identify both Brazilian and Hawaiian specimens as H. (Reniera) laubenfelsi, a species with an Indo-Pacific distribution. We postulate this species to be exotic both in the Brazilian coast and in Hawaiʻi. Our evidence is based on the arrival of the species in Brazil after 2001, being first registered next to an international port. In turn, the species is distributed discontinuously in Hawaiʻi, being mainly restricted to sheltered bays and vicinities of ports, showing a predilection for anthropogenic substrates, which strengthen the hypothesis of its exotic origin. Recent collections in Hawaiʻi (2016–2018) failed to find this species in natural habitats, though it was an abundant pioneer species in Autonomous Reef Monitoring Structures. Its capacity to colonize artificial substrata may indicate either a cryptobenthic nature or an invasive potential. We highlight the need of monitoring its abundance, spatial distribution, and biotic interactions along the Brazilian coast to assess its potential environmental impacts. The full morphological description, and the molecular sequences we provided certainly will speed up the identification of this species, allowing to track its range extension.

最近在巴西海岸的采集工作中发现了一个 Haliclona 物种,初步认定它可能是一个新物种。然而,海绵中的条形码标记--28S rRNA C-区域的测序显示,它与夏威夷的一个 Haliclona sp.(GenBank MW016137-MW016139)具有高度的遗传相似性。我们采用了综合形态学和分子评估方法,将巴西和夏威夷的标本鉴定为 H. (Reniera) laubenfelsi,这是一个分布于印度洋和太平洋的物种。我们推测该物种是巴西海岸和夏威夷的外来物种。我们的证据基于该物种在 2001 年后抵达巴西,并首次在一个国际港口附近登记。反过来,该物种在夏威夷的分布不连续,主要局限于避风海湾和港口附近,显示出对人为基质的偏爱,这加强了其外来起源的假设。最近在夏威夷的采集(2016-2018 年)未能在自然栖息地发现该物种,尽管它是自主珊瑚礁监测结构中一个丰富的先驱物种。它在人工底层定居的能力可能表明其具有隐栖性或入侵潜力。我们强调有必要对其在巴西沿海的数量、空间分布和生物相互作用进行监测,以评估其对环境的潜在影响。我们提供的完整形态描述和分子序列肯定会加快对该物种的鉴定,从而追踪其分布范围的扩展。
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引用次数: 0
Outcomes of community-led urban rat control on avifauna 社区主导的城市灭鼠行动对鸟类的影响
IF 2.9 3区 环境科学与生态学 Q1 BIODIVERSITY CONSERVATION Pub Date : 2024-07-26 DOI: 10.1007/s10530-024-03401-7
Rosie V. Gerolemou, James C. Russell, Margaret C. Stanley

Cities are increasingly recognised as important sites for biodiversity and essential for improving human-nature connections. However, urban areas are also hotspots for rats, which negatively impact biodiversity due to competition and depredation. Urban residents may undertake rat control on their properties, but the effectiveness of such volunteer initiatives for broader biodiversity outcomes has not been tested in urban environments. We conducted a comprehensive study inclusive of rat abundance, adult bird diversity, and bird breeding success. We monitored rat (Norway rat Rattus norvegicus; ship rat Rattus rattus) presence and modelled detection probabilities and occupancy in suburban residential backyards in Auckland, New Zealand. We also compared bird abundance and richness among backyards and recorded 140 nesting attempts from 15 bird species between September 2021 and February 2022. Despite rat control, rats were detected at some point in all backyards, though relative abundance was low, and fewer rats were detected in backyards with more frequent rat control. Higher bird abundance, and to a lesser extent richness, were associated with proximity to native vegetation patches and more frequent rat control. Overall fledging success was relatively high and predation by rats was relatively low compared to previous research. Nest survival was slightly higher for introduced bird species. Daily nest survival rate increased with nest height, proximity to native vegetation patches, and when rat detection rates decreased. Although the effect was small, frequent rat control within a backyard was associated with increased fledging success and increased bird species richness and abundance. Further research is required to explore the factors that interact with backyard rat control to improve local outcomes for birds. High levels of community participation in backyard rat control are required to improve neighbourhood-wide outcomes for birds.

人们日益认识到,城市是生物多样性的重要场所,对于改善人与自然的联系至关重要。然而,城市地区也是老鼠出没的热点地区,由于竞争和捕食,老鼠对生物多样性产生了负面影响。城市居民可能会在自己的物业内开展灭鼠活动,但在城市环境中,此类志愿者活动对更广泛的生物多样性成果的有效性尚未得到检验。我们开展了一项包括老鼠数量、成鸟多样性和鸟类繁殖成功率在内的综合研究。我们在新西兰奥克兰的郊区住宅后院监测老鼠(挪威鼠、船鼠)的存在,并建立了探测概率和占用率模型。我们还比较了不同后院的鸟类丰度和丰富度,并记录了 2021 年 9 月至 2022 年 2 月期间 15 种鸟类的 140 次筑巢尝试。尽管对老鼠进行了控制,但在所有后院的某些地方都发现了老鼠,尽管相对数量较少,而且在老鼠控制更频繁的后院发现的老鼠数量更少。鸟类丰度较高,其次是丰富度较高,这与接近原生植被斑块和更频繁地控制老鼠有关。与之前的研究相比,鸟类的整体羽化成功率相对较高,老鼠的捕食率相对较低。引进鸟类的巢存活率略高。巢的日存活率随着巢的高度、与本地植被斑块的距离以及老鼠发现率的降低而增加。虽然影响较小,但在后院频繁灭鼠与提高出雏成功率、增加鸟类物种丰富度和丰度有关。需要进一步研究探索与后院灭鼠工作相互作用的因素,以改善鸟类在当地的生存状况。需要社区高度参与后院灭鼠工作,以改善整个社区的鸟类状况。
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引用次数: 0
Use of otolith microchemistry to determine natal origin for Silver Carp Hypophthalmichthys molitrix in the lower Mississippi River basin 利用耳石微化学确定密西西比河下游流域鲢鱼 Hypophthalmichthys molitrix 的原产地
IF 2.9 3区 环境科学与生态学 Q1 BIODIVERSITY CONSERVATION Pub Date : 2024-07-26 DOI: 10.1007/s10530-024-03358-7
C. E. Barshinger, M. A. Eggleton, J. J. Spurgeon

Silver Carp (Hypophthalmichthys molitrix) populations have established and expanded throughout the lower Mississippi River basin (LMRB). Information pertaining to Silver Carp population mixing among rivers within the LMRB is lacking. Documented relations between Silver Carp otolith and river water barium (Ba) and strontium (Sr) microchemical signatures may enable estimation of origins of Silver Carp in the LMRB. Replicate water samples and otoliths from 308 Silver Carp were collected from the Cache, Arkansas, White, Yazoo, St. Francis, L’Anguille, and Mississippi rivers, and Merrisach Lake (situated along a canal connecting the lower reaches of the Arkansas and White rivers) within the LMRB. Water and carp otolith microchemical signatures exhibited consistent differences among water bodies. A classification and regression tree model exhibited 80% accuracy when assigning carp collected from the White, Arkansas, and Mississippi rivers based on fish-water microchemical signatures. Model accuracy decreased as smaller rivers were incorporated into models. Predicted natal origin based on otolith microchemical signatures suggested the White River (43%) and the lower Mississippi River (39%) were the likely origins for ~ 82% of the Silver Carp sampled. Despite the prevalence of adult Silver Carp within the Arkansas River system, fewer (18%) appeared to have originated there compared to the White and Mississippi rivers. Long-term water sampling and additional isotopic measurements may refine analyses to better determine the relative contributions of Silver Carp from the smaller river systems. Population mixing of Silver Carp among tributary rivers appears to be common within the LMRB, and removal efforts may benefit from evaluating the magnitude of fish movement and connectivity among rivers.

鲢鱼(Hypophthalmichthys molitrix)种群已在密西西比河下游流域(LMRB)形成并扩大。目前还缺乏密西西比河流域内不同河流之间鲢鱼种群混合的相关信息。记录鲢鱼耳石与河水钡(Ba)和锶(Sr)微化学特征之间的关系可能有助于估计密西西比河下游流域鲢鱼的来源。从 LMRB 内的 Cache 河、Arkansas 河、White 河、Yazoo 河、St. Francis 河、L'Anguille 河和密西西比河以及 Merrisach 湖(位于连接 Arkansas 河和 White 河下游的运河沿岸)收集了 308 尾鲢鱼的重复水样和耳石。水体和鲤鱼耳石微化学特征在不同水体之间表现出一致的差异。分类和回归树模型显示,根据鱼类-水体微化学特征对从怀特河、阿肯色河和密西西比河采集的鲤鱼进行分类的准确率为 80%。当将较小的河流纳入模型时,模型的准确率有所下降。根据耳石微化学特征预测的产地表明,白河(43%)和密西西比河下游(39%)可能是约 82% 采样鲢鱼的产地。尽管阿肯色河水系中普遍存在成年鲢鱼,但与白河和密西西比河相比,起源于该水系的鲢鱼数量较少(18%)。长期的水样采集和额外的同位素测量可能会完善分析,从而更好地确定来自较小河流水系的鲢鱼的相对贡献率。鲢鱼在支流河流之间的种群混合似乎在 LMRB 中很常见,评估鱼类在河流之间的移动和连接程度可能会对移除工作有所帮助。
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引用次数: 0
Direct and indirect effects of an invasive ecosystem engineer on a rare herbaceous wetland 入侵生态系统工程师对稀有草本湿地的直接和间接影响
IF 2.9 3区 环境科学与生态学 Q1 BIODIVERSITY CONSERVATION Pub Date : 2024-07-24 DOI: 10.1007/s10530-024-03402-6
Megan E. Brown, Deborah L. Miller, Ashlynn N. Smith, Barbara M. Cory

Feral hogs (Sus scrofa) are invasive, ecosystem engineers and a novel disturbance to rare, fire-dependent, herbaceous wetland ecosystems in Florida, USA. Their feeding activity uproots vegetation, altering plant composition and continuity. Hog rooting can also create linked disturbance by ingesting vegetation critical for fire spread. Herbaceous communities are vulnerable to shrub encroachment when fire return intervals are increased. We examined the impact of hog rooting intensity (% uprooted vegetation) on the resilience of herbaceous, seepage wetland vegetation cover and composition and the effect of hog rooting on fire spread. We hypothesized that (1) vegetation cover and composition would reflect initial intensity of hog rooting and remain altered with and without additional rooting, and (2) reduction of foliar cover by feral hog rooting would reduce fire spread. Total foliar cover, functional group cover, richness, and cover of plant genera were estimated in plots subjected to three intensity levels of hog rooting then appraised inside and outside of exclosures for 7 years. Spatial data was collected to compare areas with and without damage from hogs to areas burned by prescribed fires from 2010–2013. Total foliar cover was reduced for 5 years with high intensity hog rooting compared to no-low intensity rooting. Cover of a keystone, bunchgrass species was reduced with high intensity hog rooting. With repeated rooting, total and graminoid foliar cover were reduced outside exclosures. Fire spread was significantly reduced in areas of hog rooting. These findings have broader implications for conservation of other fire-maintained herbaceous communities impacted by nonindigenous feral hogs.

野猪(Sus scrofa)是一种入侵性生态系统工程师,对美国佛罗里达州稀有的、依赖火源的草本湿地生态系统造成了新的干扰。它们的觅食活动会使植被连根拔起,改变植物的组成和连续性。生根猪还会吞食对火灾蔓延至关重要的植被,从而造成连锁干扰。当火灾重现间隔延长时,草本群落很容易被灌木侵占。我们研究了生猪扎根强度(连根拔起植被的百分比)对草本渗流湿地植被覆盖和组成的恢复能力的影响,以及生猪扎根对火灾蔓延的影响。我们假设:(1) 植被覆盖度和组成将反映生猪扎根的初始强度,并在生猪扎根或不扎根的情况下保持不变;(2) 野猪扎根造成的叶面覆盖度降低将减少火灾蔓延。对受到三种强度野猪扎根的地块进行了叶面总覆盖率、功能群覆盖率、植物丰富度和植物属覆盖率的估算,然后对围栏内外进行了为期 7 年的评估。收集了空间数据,以比较有猪害和无猪害的地区与 2010-2013 年期间被明火焚烧的地区。高强度生猪扎根与无低强度生猪扎根相比,叶片总覆盖面积减少了 5 年。在高强度生猪扎根的情况下,一种关键性的束草物种的覆盖率降低了。反复生根后,围栏外的总覆盖度和禾本科叶片覆盖度都有所降低。生猪扎根区域的火灾蔓延明显减少。这些发现对保护受非本地野猪影响的其他火烧草本群落具有更广泛的意义。
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引用次数: 0
Research horizons for invasive marine species detection with eDNA/eRNA 利用 eDNA/eRNA 检测海洋入侵物种的研究前景
IF 2.9 3区 环境科学与生态学 Q1 BIODIVERSITY CONSERVATION Pub Date : 2024-07-24 DOI: 10.1007/s10530-024-03406-2
Simon Jarman, Fran Ackermann, Michael Marnane, Oliver Berry, Michael Bunce, Kathryn Dawkins, Elise Furlan, Sherralee Lukehurst, Justin McDonald, Xavier Pochon, Shaun Wilkinson, Anastasija Zaiko, Euan Harvey

The global marine ecosystem is changing rapidly as the result of biogeochemical cycles and ecosystem structure being altered by industrial civilization. Invasive marine species (IMS) are one of the most damaging regional consequences of human activity, and one of the most easily attributable to specific processes. This makes IMS introduction one of most tractable threats for management by appropriate policies. Once established, a different set of policies are required either to restrict IMS spread, or to attempt local eradication. The key ecosystem management tool for IMS damage mitigation is rapid, widely deployable IMS detection. Environmental Nucleic Acids (eNA), combining environmental DNA (eDNA) and environmental RNA (eRNA) analyses, have emerged as valuable tools for sensitive, cost-effective and readily deployable detection of IMS. Methods for IMS detection by eNA are still being developed through a widespread and active research community, so identifying the limitations of current processes will help prioritise eNA-based IMS detection research. We analysed and synthesised the opinions of expert marine ecosystem managers and researchers in Australia and New Zealand about the knowledge gaps and research needs for eNA-based IMS detection. This synthesis was placed in context with current research literature on what eNA technologies are currently providing as an IMS management tool; what problems exist with the current technology; and what could be done to improve this general approach. Our analyses produced a list of priorities that chart a path towards the best possible systems for IMS detection by eNA.

由于工业文明改变了生物地球化学循环和生态系统结构,全球海洋生态系统正在发生迅速变化。海洋入侵物种(IMS)是人类活动造成的最具破坏性的区域性后果之一,也是最容易归因于特定过程的物种之一。因此,海洋生物入侵是最容易通过适当政策进行管理的威胁之一。一旦建立起来,就需要一套不同的政策来限制 IMS 的扩散或试图在当地根除。减轻 IMS 危害的关键生态系统管理工具是快速、广泛部署的 IMS 检测。环境核酸(ENA)结合了环境 DNA(eDNA)和环境 RNA(eRNA)分析,已成为灵敏、经济、易于部署的 IMS 检测工具。通过ENA检测IMS的方法仍在广泛而活跃的研究社区中不断发展,因此确定当前流程的局限性将有助于优先开展基于ENA的IMS检测研究。我们分析并综合了澳大利亚和新西兰的海洋生态系统管理专家和研究人员对基于辰核糖核酸的 IMS 检测的知识差距和研究需求的意见。我们结合当前的研究文献对这一综述进行了分析,这些文献涉及:ENA 技术目前提供了哪些 IMS 管理工具;当前技术存在哪些问题;以及如何改进这一通用方法。通过分析,我们提出了一份优先事项清单,为通过ENA检测IMS的最佳系统指明了方向。
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引用次数: 0
A morphogenetic characterisation of a potentially dominant African marine species in Europe 一种可能在欧洲占主导地位的非洲海洋物种的形态特征
IF 2.9 3区 环境科学与生态学 Q1 BIODIVERSITY CONSERVATION Pub Date : 2024-07-19 DOI: 10.1007/s10530-024-03354-x
Marc Rius, Xavier Turon, Paloma Morán, Jacinto Pérez, Bruno Almón, Govan Pahad, Peter R. Teske, Elsa Vázquez

Studying the early stages of the introduction of non-indigenous species (NIS) is crucial as it allows immediate management actions aimed at preventing NIS spread at a time when these actions are more likely to be effective. Recent species introductions present unique opportunities to study key aspects of the invasion process. However, comprehensive information on how and when NIS are first introduced remains rare. We assessed the characteristics of the introduction of a member of the widespread Pyura stolonifera species group (Chordata, Tunicata) in Europe. These ascidians are important bioengineer species that can attain amongst the highest benthic biomass per surface area ever reported. We collected introduced individuals on the coast of the northwestern Iberian Peninsula, an area with high shipping traffic and one of the world’s most important mussel farming regions. The specimens were analysed using taxonomic and genetic tools. Both field surveys and taxonomic analysis showed that one of the African members of the species group, Pyura herdmani, has recently been introduced to Europe and, although it does not yet form the large aggregates found in the native range, it is already well-established. Genetic data revealed that only the northwest African lineage of P. herdmani has been introduced to Europe. Considering the low dispersal capabilities of the early life-history stages of P. herdmani, the introduction of this species into Europe can only be explained via human mediated transport of NIS. In order to prevent any detrimental effects on both native biota and/or economically-important anthropogenic activities, regular monitoring of recent NIS introductions is urgently required.

研究非本地物种(NIS)引入的早期阶段至关重要,因为这样可以在这些行动更有可能奏效的时候立即采取管理行动,防止非本地物种扩散。最近的物种引入为研究入侵过程的关键方面提供了独特的机会。然而,有关近地入侵物种首次引入的方式和时间的全面信息仍然很少见。我们评估了欧洲引入的广泛分布的匍匐栉水母(Pyura stolonifera)物种群(脊索动物门,栉水母纲)的特征。这些腹足类是重要的生物工程物种,其单位表面积的底栖生物量是有报道以来最高的。我们在伊比利亚半岛西北部海岸采集了引进个体,该地区航运繁忙,是世界上最重要的贻贝养殖区之一。我们使用分类学和遗传学工具对标本进行了分析。实地调查和分类学分析表明,该物种群中的一个非洲成员--Pyura herdmani--最近被引入欧洲,虽然它还没有形成在原生地发现的大型集合体,但已经建立了良好的基础。遗传数据显示,只有西北非洲系的 P. herdmani 被引入欧洲。考虑到 P. herdmani 早期生活史阶段的扩散能力较低,该物种传入欧洲只能通过人类介导的 NIS 运输来解释。为了防止对本地生物群和/或具有重要经济意义的人类活动造成任何有害影响,迫切需要对近期引入的 NIS 进行定期监测。
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引用次数: 0
Invasive species identification from high-resolution 4-band multispectral imagery 利用高分辨率 4 波段多光谱图像识别入侵物种
IF 2.9 3区 环境科学与生态学 Q1 BIODIVERSITY CONSERVATION Pub Date : 2024-07-18 DOI: 10.1007/s10530-024-03397-0
Christopher Ardohain, Cameron Wingren, Bina Thapa, Songlin Fei

Invasive tree species pose major threats to various ecosystems, and their accurate identification and mapping are vital to the development of effective management strategies. Many invasive species demonstrate unique phenological characteristics that are visually identifiable through remote sensing. Previous species identification research relies heavily on the fusion of multiple remote sensing data sources, and are highly constricted in spatial scale. Here, we used high resolution, single instance, 4-band aerial imagery acquired during the blooming season to identify and map Callery pear (Pyrus calleryana) across all five New York City Boroughs (~ 1.188 km2) in urban, suburban, and non-developed environments. We compared traditional pixel-based filtering models against U-Net based convolutional neural networks (CNN). The U-Net CNN greatly outperformed the traditional pixel-based models, achieving a precision, recall, and F1 score of 86.9%, 89.5%, and 88.2% respectively compared to a performance of 47.2%, 52.7%, and 49.8% for the best of the pixel-based models. We also greatly improved CNN performance through the introduction of negative training data, specifically in non-urban areas. We show an effective deep learning strategy for identifying and mapping canopy coverage of Callery pear, which provides a base map for monitoring and management of Callery pear in the Greater New York City Metropolitan Area. More importantly, the method can be readily applicable to the mapping of Callery pear in other regions or other invasive species with unique phenological characteristics given the availability of punctual, high-resolution, multispectral imagery.

入侵树种对各种生态系统构成重大威胁,准确识别和绘制入侵树种地图对制定有效的管理策略至关重要。许多入侵物种表现出独特的物候特征,可通过遥感技术直观识别。以往的物种识别研究在很大程度上依赖于多种遥感数据源的融合,在空间尺度上受到很大限制。在此,我们利用在花季获取的高分辨率、单实例、4 波段航空图像,在纽约市所有五个区(约 1.188 平方公里)的城市、郊区和非开发环境中识别并绘制了刺梨(Pyrus calleryana)。我们将传统的基于像素的过滤模型与基于 U-Net 的卷积神经网络 (CNN) 进行了比较。U-Net CNN 的性能大大优于传统的基于像素的模型,其精确度、召回率和 F1 分数分别达到了 86.9%、89.5% 和 88.2%,而基于像素的最佳模型的精确度、召回率和 F1 分数分别为 47.2%、52.7% 和 49.8%。我们还通过引入负面训练数据,特别是非城市地区的数据,大大提高了 CNN 的性能。我们展示了一种有效的深度学习策略,可用于识别和绘制 Callery pear 的树冠覆盖图,为大纽约大都会区 Callery pear 的监测和管理提供基础地图。更重要的是,由于可以获得准时、高分辨率、多光谱图像,该方法可随时用于绘制其他地区或其他具有独特物候特征的入侵物种的马缨丹图。
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引用次数: 0
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Biological Invasions
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