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Tert-butylhydroquinone promotes skin flap survival by inhibiting oxidative stress mediated by the Nrf2/HO-1 signalling pathway 叔丁基对苯二酚通过抑制 Nrf2/HO-1 信号通路介导的氧化应激促进皮瓣存活。
IF 6.8 2区 医学 Q1 PHARMACOLOGY & PHARMACY Pub Date : 2024-09-04 DOI: 10.1111/bph.17321
Kaitao Wang, An Wang, Jiapeng Deng, Jialong Yang, Guodong Chen, Qingyu Chen, Minle Ye, Dingsheng Lin

Background and Purpose

Skin flaps are among the most important means of wound repair in clinical settings. However, partial or even total distal necrosis may occur after a flap operation, with severe consequences for both patients and doctors. This study investigated whether tert-butylhydroquinone (TBHQ), a known agonist of the transcription factor nuclear factor erythroid 2-related factor 2 (Nrf2), and an antioxidant, could promote skin flap survival.

Experimental Approach

McFarlane skin flap models were established in male Sprague–Dawley rats and then randomly divided into control, low-dose TBHQ, and high-dose TBHQ treatment groups. On postoperative day 7, the survival and blood flow of the skin flaps were assessed. Using flap tissue samples, angiogenesis, inflammation, apoptosis, autophagy, and Nrf2/haem oxygenase 1 (HO-1) signalling pathway activity were measured with immunohistochemical techniques and western blotting.

Key Results

TBHQ dose-dependently stimulated the Nrf2/HO-1 signalling pathway, inducing autophagy through the up-regulation of LC3B and beclin 1 and concurrently suppressing p62 expression. Additionally, TBHQ hindered apoptosis by enhancing Bcl-2 expression while inhibiting the expression of Bax. It suppressed inflammation by inhibiting the expression of interleukin 1β, interleukin 6, and tumour necrosis factor-α and enhanced angiogenesis by promoting the expression of vascular endothelial growth factor.

Conclusion and Implications

In summary, TBHQ promoted flap survival in rats by up-regulating the Nrf2/HO-1 signalling pathway. As TBHQ is already widely used as a food additive, it could offer an acceptable means of improving clinical outcomes following skin flap surgery in patients.

背景和目的:皮瓣是临床上最重要的伤口修复手段之一。然而,皮瓣手术后可能会出现部分甚至全部远端坏死,给患者和医生带来严重后果。本研究探讨了叔丁基对苯二酚(TBHQ)--一种已知的转录因子核因子红细胞2相关因子2(Nrf2)激动剂和抗氧化剂--能否促进皮瓣存活:实验方法:用雄性 Sprague-Dawley 大鼠建立麦克法兰皮瓣模型,然后将其随机分为对照组、低剂量 TBHQ 治疗组和高浓度 TBHQ 治疗组。术后第 7 天,对皮瓣的存活率和血流量进行评估。利用皮瓣组织样本,采用免疫组化技术和 Western 印迹法测定血管生成、炎症、细胞凋亡、自噬和 Nrf2/ 血氧合酶 1(HO-1)信号通路的活性:主要结果:TBHQ剂量依赖性地刺激Nrf2/HO-1信号通路,通过上调LC3B和beclin 1诱导自噬,同时抑制p62的表达。此外,TBHQ 还能提高 Bcl-2 的表达,同时抑制 Bax 的表达,从而阻碍细胞凋亡。它通过抑制白细胞介素 1β、白细胞介素 6 和肿瘤坏死因子-α的表达来抑制炎症,并通过促进血管内皮生长因子的表达来增强血管生成:总之,TBHQ 通过上调 Nrf2/HO-1 信号通路促进了大鼠皮瓣的存活。由于 TBHQ 已被广泛用作食品添加剂,因此它可以为改善患者皮瓣手术后的临床疗效提供一种可接受的方法。
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引用次数: 0
Advancing the field of viroporins—Structure, function and pharmacology: IUPHAR Review 39 推进 viroporins 领域--结构、功能和药理学:IUPHAR Review X.
IF 6.8 2区 医学 Q1 PHARMACOLOGY & PHARMACY Pub Date : 2024-09-03 DOI: 10.1111/bph.17317
Kira Devantier, Viktoria M. S. Kjær, Stephen Griffin, Birthe B. Kragelund, Mette M. Rosenkilde

Viroporins possess important potential as antiviral targets due to their critical roles during virus life cycles, spanning from virus entry to egress. Although the antiviral amantadine targets the M2 viroporin of influenza A virus, successful progression of other viroporin inhibitors into clinical use remains challenging. These challenges relate in varying proportions to a lack of reliable full-length 3D-structures, difficulties in functionally characterising individual viroporins, and absence of verifiable direct binding between inhibitor and viroporin. This review offers perspectives to help overcome these challenges. We provide a comprehensive overview of the viroporin family, including their structural and functional features, highlighting the moldability of their energy landscapes and actions. To advance the field, we suggest a list of best practices to aspire towards unambiguous viroporin identification and characterisation, along with considerations of potential pitfalls. Finally, we present current and future scenarios of, and prospects for, viroporin targeting drugs.

病毒蛋白在病毒生命周期(从病毒进入到排出)中发挥着关键作用,因此具有作为抗病毒靶点的重要潜力。虽然抗病毒药物金刚烷胺针对的是甲型流感病毒的 M2 病毒蛋白,但其他病毒蛋白抑制剂能否成功进入临床应用仍面临挑战。这些挑战在不同程度上与缺乏可靠的全长三维结构、难以对单个病毒蛋白进行功能表征以及抑制剂与病毒蛋白之间缺乏可验证的直接结合有关。本综述提出了有助于克服这些挑战的观点。我们全面概述了病毒蛋白家族,包括其结构和功能特征,强调了其能量景观和作用的可塑性。为了推动该领域的发展,我们提出了一份最佳实践清单,以实现明确的病毒蛋白鉴定和表征,同时考虑到潜在的陷阱。最后,我们介绍了病毒蛋白靶向药物目前和未来的发展前景。
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引用次数: 0
Targeting RNA with small molecules, from RNA structures to precision medicines: IUPHAR review: 40 用小分子靶向 RNA,从 RNA 结构到精准药物:IUPHAR review:40.
IF 6.8 2区 医学 Q1 PHARMACOLOGY & PHARMACY Pub Date : 2024-09-03 DOI: 10.1111/bph.17308
Yuquan Tong, Jessica L. Childs-Disney, Matthew D. Disney

RNA plays important roles in regulating both health and disease biology in all kingdoms of life. Notably, RNA can form intricate three-dimensional structures, and their biological functions are dependent on these structures. Targeting the structured regions of RNA with small molecules has gained increasing attention over the past decade, because it provides both chemical probes to study fundamental biology processes and lead medicines for diseases with unmet medical needs. Recent advances in RNA structure prediction and determination and RNA biology have accelerated the rational design and development of RNA-targeted small molecules to modulate disease pathology. However, challenges remain in advancing RNA-targeted small molecules towards clinical applications. This review summarizes strategies to study RNA structures, to identify small molecules recognizing these structures, and to augment the functionality of RNA-binding small molecules. We focus on recent advances in developing RNA-targeted small molecules as potential therapeutics in a variety of diseases, encompassing different modes of actions and targeting strategies. Furthermore, we present the current gaps between early-stage discovery of RNA-binding small molecules and their clinical applications, as well as a roadmap to overcome these challenges in the near future.

RNA 在调节所有生命体的健康和疾病生物学方面都发挥着重要作用。值得注意的是,RNA 可以形成复杂的三维结构,其生物功能取决于这些结构。过去十年来,用小分子靶向 RNA 结构区的研究越来越受到关注,因为它既能提供化学探针来研究基本生物学过程,又能提供先导药物来治疗医疗需求未得到满足的疾病。最近在 RNA 结构预测和确定以及 RNA 生物学方面取得的进展,加速了 RNA 靶向小分子的合理设计和开发,以调节疾病病理。然而,将 RNA 靶向小分子推向临床应用仍面临挑战。本综述总结了研究 RNA 结构、识别这些结构的小分子以及增强 RNA 结合型小分子功能的策略。我们重点介绍了开发 RNA 靶向小分子作为各种疾病潜在疗法的最新进展,包括不同的作用模式和靶向策略。此外,我们还介绍了目前 RNA 结合小分子的早期发现与其临床应用之间的差距,以及在不久的将来克服这些挑战的路线图。
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引用次数: 0
The plant extract PNS mitigates atherosclerosis via promoting Nrf2-mediated inhibition of ferroptosis through reducing USP2-mediated Keap1 deubiquitination 植物提取物PNS通过减少USP2介导的Keap1去泛素化,促进Nrf2介导的铁变态反应抑制,从而减轻动脉粥样硬化。
IF 6.8 2区 医学 Q1 PHARMACOLOGY & PHARMACY Pub Date : 2024-09-03 DOI: 10.1111/bph.17311
Yun Zhao, Guobin Zheng, Shu Yang, Shangjing Liu, Yifan Wu, Yaodong Miao, Zhen Liang, Yunqing Hua, Jing Zhang, Jia Shi, Dan Li, Yanfei Cheng, Yunsha Zhang, Yuanli Chen, Guanwei Fan, Chuanrui Ma

Background and purpose

Atherosclerosis is the basis of cardiovascular disease. Ferroptosis is a form of programmed cell death characterized by lipid peroxidation, which contributes to atherogenesis. The plant extract PNS (Panax notoginseng saponins), containing the main active ingredients of Panax notoginseng, exhibits anti-atherogenic properties. Herein, we determined whether PNS and its major components could attenuate atherosclerosis by suppressing ferroptosis and revealed the underlying mechanism(s).

Experimental approach

The anti-atherogenic effects of PNS and their association with inhibition of ferroptosis was determined in apoE−/− mice. In vitro, the anti-ferroptotic effect and mechanism(s) of PNS components were demonstrated in the presence of ferroptosis inducers. Expression of ferroptosis markers and the ubiquitination of Keap1 were evaluated in USP2−/− macrophages. Finally, the anti-atherogenic effect of USP2 knockout was determined by using USP2−/− mice treated with high-fat diet (HFD) and AAV-PCSK9.

Key results

PNS inhibited ferroptosis and atherosclerosis in vivo. PNS suppressed ferroptosis and ferroptosis-aggravated foam cell formation and inflammation in vitro. Mechanistically, PNS and its components activated Nrf2 by antagonizing Keap1, which was attributed to the inhibition of USP2 expression. USP2 knockout antagonized ferroptosis and ferroptosis-aggravated foam cell formation and inflammation, thus mitigating atherosclerosis. USP2 knockout abolished inhibitory effects of PNS on foam cell formation and inflammation in vitro.

Conclusion and implications

PNS reduced USP2-mediated Keap1 de-ubiquitination and promoted Keap1 degradation, thereby activating Nrf2, improving iron metabolism and reducing lipid peroxidation, thus contributing to an anti-atherosclerotic outcome. Our study revealed the mechanism(s) underlying inhibition of ferroptosis and atherosclerosis by PNS.

背景和目的:动脉粥样硬化是心血管疾病的基础。铁变态反应是一种以脂质过氧化为特征的程序性细胞死亡,它是动脉粥样硬化的诱因。植物提取物 PNS(三七皂苷)含有三七的主要活性成分,具有抗动脉粥样硬化的特性。在此,我们确定了三七皂苷及其主要成分是否能通过抑制铁变态反应来减轻动脉粥样硬化,并揭示了其潜在机制:实验方法:在载脂蛋白E-/-小鼠体内测定PNS的抗动脉粥样硬化作用及其与抑制铁蛋白沉积的关系。实验方法:在载脂蛋白E-/-小鼠体内测定 PNS 的抗动脉粥样硬化作用及其与抑制铁蛋白沉积的关系。评估了 USP2-/-巨噬细胞中铁败标志物的表达和 Keap1 的泛素化。最后,通过使用高脂饮食(HFD)和AAV-PCSK9处理USP2-/-小鼠,确定了USP2基因敲除的抗动脉粥样硬化作用:PNS抑制了体内的铁蛋白沉积和动脉粥样硬化。PNS 在体外抑制了铁蛋白沉积和铁蛋白沉积加重的泡沫细胞形成和炎症。从机理上讲,PNS 及其成分通过拮抗 Keap1 激活了 Nrf2,这归因于对 USP2 表达的抑制。USP2 基因敲除可拮抗铁蛋白沉积和铁蛋白沉积加重的泡沫细胞形成和炎症,从而减轻动脉粥样硬化。USP2 基因敲除消除了 PNS 对体外泡沫细胞形成和炎症的抑制作用:PNS减少了USP2介导的Keap1去泛素化,促进了Keap1降解,从而激活了Nrf2,改善了铁代谢,减少了脂质过氧化,从而有助于抗动脉粥样硬化。我们的研究揭示了 PNS 抑制铁代谢和动脉粥样硬化的机制。
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引用次数: 0
A novel inhibitor of class IIa histone deacetylases attenuates collagen-induced arthritis 一种新型 IIa 类组蛋白去乙酰化酶抑制剂可减轻胶原蛋白诱发的关节炎。
IF 6.8 2区 医学 Q1 PHARMACOLOGY & PHARMACY Pub Date : 2024-09-02 DOI: 10.1111/bph.17306
Eunice K. Poon, Ligong Liu, Kai-Chen Wu, Junxian Lim, Matthew J. Sweet, Rink-Jan Lohman, Abishek Iyer, David P. Fairlie

Background and Purpose

Most inhibitors of histone deacetylases (HDACs) are not selective and are cytotoxic. Some have anti-inflammatory activity in disease models, but cytotoxicity prevents long-term uses in non-fatal diseases. Inhibitors selective for class IIa HDACs are much less cytotoxic and may have applications in management of chronic inflammatory diseases.

Experimental Approach

LL87 is a novel HDAC inhibitor examined here for HDAC enzyme selectivity. It was also investigated in macrophages for cytotoxicity and for inhibition of lipopolysaccharide (LPS)-stimulated cytokine secretion. In a rat model of collagen-induced arthritis, LL87 was investigated for effects on joint inflammation in Dark Agouti rats. Histological, immunohistochemical, micro-computed tomography and molecular analyses characterise developing arthritis and anti-inflammatory efficacy.

Key Results

LL87 was significantly more inhibitory against class IIa than class I or IIb HDAC enzymes. In macrophages, LL87 was not cytotoxic and reduced both LPS-induced secretion of pro-inflammatory cytokines, and IL6-induced class IIa HDAC activity. In rats, LL87 attenuated paw swelling and clinical signs of arthritis, reducing collagen loss and histological damage in ankle joints. LL87 decreased immune cell infiltration, especially pro-inflammatory macrophages and osteoclasts, into synovial joints and significantly reduced expression of pro-inflammatory cytokines and tissue-degrading proteases.

Conclusion and Implications

A novel inhibitor of class IIa HDACs has been shown to have an anti-inflammatory and anti-arthritic profile distinct from current therapies. It is efficacious in reducing macrophage infiltration and joint inflammation in a chronic model of rat arthritis.

背景和目的:大多数组蛋白去乙酰化酶(HDACs)抑制剂都没有选择性,而且具有细胞毒性。有些抑制剂在疾病模型中具有抗炎活性,但细胞毒性阻碍了其在非致命性疾病中的长期应用。对 IIa 类 HDAC 具有选择性的抑制剂的细胞毒性要小得多,可用于慢性炎症性疾病的治疗:实验方法:LL87 是一种新型 HDAC 抑制剂,本实验对其 HDAC 酶选择性进行了研究。实验方法:LL87 是一种新型 HDAC 抑制剂,本文研究了它对 HDAC 酶的选择性,还研究了它在巨噬细胞中的细胞毒性和对脂多糖(LPS)刺激的细胞因子分泌的抑制作用。在胶原蛋白诱导的大鼠关节炎模型中,研究了 LL87 对 Dark Agouti 大鼠关节炎症的影响。组织学、免疫组化、微型计算机断层扫描和分子分析显示了关节炎发展和抗炎功效的特征:主要结果:LL87 对 IIa 类 HDAC 酶的抑制作用明显强于 I 类或 IIb 类 HDAC 酶。在巨噬细胞中,LL87 没有细胞毒性,并能减少 LPS 诱导的促炎细胞因子分泌和 IL6 诱导的 IIa 类 HDAC 活性。在大鼠身上,LL87 可减轻爪肿和关节炎的临床症状,减少胶原蛋白流失和踝关节的组织学损伤。LL87 可减少免疫细胞,尤其是促炎巨噬细胞和破骨细胞向滑膜关节的浸润,并显著降低促炎细胞因子和组织降解蛋白酶的表达:一种新型 IIa 类 HDAC 抑制剂具有不同于现有疗法的抗炎和抗关节炎特性。在慢性大鼠关节炎模型中,它能有效减少巨噬细胞浸润和关节炎症。
{"title":"A novel inhibitor of class IIa histone deacetylases attenuates collagen-induced arthritis","authors":"Eunice K. Poon,&nbsp;Ligong Liu,&nbsp;Kai-Chen Wu,&nbsp;Junxian Lim,&nbsp;Matthew J. Sweet,&nbsp;Rink-Jan Lohman,&nbsp;Abishek Iyer,&nbsp;David P. Fairlie","doi":"10.1111/bph.17306","DOIUrl":"10.1111/bph.17306","url":null,"abstract":"<div>\u0000 \u0000 \u0000 <section>\u0000 \u0000 <h3> Background and Purpose</h3>\u0000 \u0000 <p>Most inhibitors of histone deacetylases (HDACs) are not selective and are cytotoxic. Some have anti-inflammatory activity in disease models, but cytotoxicity prevents long-term uses in non-fatal diseases. Inhibitors selective for class IIa HDACs are much less cytotoxic and may have applications in management of chronic inflammatory diseases.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Experimental Approach</h3>\u0000 \u0000 <p>LL87 is a novel HDAC inhibitor examined here for HDAC enzyme selectivity. It was also investigated in macrophages for cytotoxicity and for inhibition of lipopolysaccharide (LPS)-stimulated cytokine secretion. In a rat model of collagen-induced arthritis, LL87 was investigated for effects on joint inflammation in Dark Agouti rats. Histological, immunohistochemical, micro-computed tomography and molecular analyses characterise developing arthritis and anti-inflammatory efficacy.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Key Results</h3>\u0000 \u0000 <p>LL87 was significantly more inhibitory against class IIa than class I or IIb HDAC enzymes. In macrophages, LL87 was not cytotoxic and reduced both LPS-induced secretion of pro-inflammatory cytokines, and IL6-induced class IIa HDAC activity. In rats, LL87 attenuated paw swelling and clinical signs of arthritis, reducing collagen loss and histological damage in ankle joints. LL87 decreased immune cell infiltration, especially pro-inflammatory macrophages and osteoclasts, into synovial joints and significantly reduced expression of pro-inflammatory cytokines and tissue-degrading proteases.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Conclusion and Implications</h3>\u0000 \u0000 <p>A novel inhibitor of class IIa HDACs has been shown to have an anti-inflammatory and anti-arthritic profile distinct from current therapies. It is efficacious in reducing macrophage infiltration and joint inflammation in a chronic model of rat arthritis.</p>\u0000 </section>\u0000 </div>","PeriodicalId":9262,"journal":{"name":"British Journal of Pharmacology","volume":"181 23","pages":"4804-4821"},"PeriodicalIF":6.8,"publicationDate":"2024-09-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1111/bph.17306","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142119021","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Discovery of natural product derivative triptolidiol as a direct NLRP3 inhibitor by reducing K63-specific ubiquitination. 通过减少 K63 特异性泛素化,发现天然产物衍生物 triptolidiol 可直接作为 NLRP3 抑制剂。
IF 6.8 2区 医学 Q1 PHARMACOLOGY & PHARMACY Pub Date : 2024-09-01 DOI: 10.1111/bph.17320
Mo-Yu Ding, Chengqing Ning, Shao-Ru Chen, Hao-Ran Yin, Jing Xu, Ying Wang

Background and purpose: NLRP3 is up-regulated in inflammatory and autoimmune diseases. The development of NLRP3 inhibitors is challenged by the identification of compounds with distinct mechanisms of action avoiding side effects and toxicity. Triptolide is a natural product with multiple anti-inflammatory activities, but a narrow therapeutic window.

Experimental approach: Natural product triptolide derivatives were screened for NLRP3 inhibitors in human THP-1 and mouse bone marrow-derived macrophages. The efficacy of potent NLRP3 inhibitors was evaluated in LPS-induced acute lung injury and septic shock models.

Key results: Triptolidiol was identified as a selective inhibitor of NLRP3 with high potency. Triptolidiol inactivated the NLRP3 inflammasome in human THP-1 and mouse primary macrophages primed with LPS. Triptolidiol specifically inhibited pro-caspase 1 cleavage downstream of NLRP3, but not AIM2 or NLRC4 inflammasomes. Based on the structure-activity relationship study, the C8-β-OH group was critical for its binding to NLRP3. Triptolidiol exhibited a submicromolar KD for NLRP3, binding to residue C280. This binding prevented the interaction of NLRP3 with NEK7, the key regulator of NLRP3 inflammasome oligomerization and assembly, but not with the inflammasome adaptor protein ASC. Triptolidiol decreased the K63-specific ubiquitination of NLRP3, leading NLRP3 to a "closed" inactive conformation. Intraperitoneal administration of triptolidiol significantly attenuated LPS-induced acute lung injury and lethal septic shock.

Conclusion and implications: Triptolidiol is a novel NLRP3 inhibitor that regulates inflammasome assembly and activation by decreasing K63-linked ubiquitination. Triptolidiol has novel structural features that make it distinct from reported NLRP3 inhibitors and represents a viable therapeutic lead for inflammatory diseases.

背景和目的:NLRP3 在炎症和自身免疫性疾病中上调。开发 NLRP3 抑制剂面临的挑战是找到具有独特作用机制、避免副作用和毒性的化合物。雷公藤内酯是一种天然产物,具有多种抗炎活性,但治疗窗口较窄:实验方法:在人类 THP-1 和小鼠骨髓衍生巨噬细胞中筛选天然产品曲托内酯衍生物作为 NLRP3 抑制剂。在 LPS 诱导的急性肺损伤和脓毒性休克模型中评估了强效 NLRP3 抑制剂的疗效:主要结果:经鉴定,Triptolidiol 是一种高效的 NLRP3 选择性抑制剂。Triptolidiol能使LPS诱导的人THP-1和小鼠原代巨噬细胞中的NLRP3炎性体失活。Triptolidiol 可特异性抑制 NLRP3 下游的促天冬酶 1 的裂解,但不能抑制 AIM2 或 NLRC4 炎症体。根据结构-活性关系研究,C8-β-OH基团是其与NLRP3结合的关键。Triptolidiol 与 NLRP3 的 KD 值为亚摩尔,与残基 C280 结合。这种结合阻止了 NLRP3 与 NEK7(NLRP3 炎症小体寡聚和组装的关键调节因子)的相互作用,但没有阻止 NLRP3 与炎症小体适配蛋白 ASC 的相互作用。Triptolidiol减少了NLRP3的K63特异性泛素化,导致NLRP3处于 "封闭 "的非活性构象。腹腔注射三唑醇能显著减轻LPS诱导的急性肺损伤和致死性脓毒性休克:Triptolidiol是一种新型NLRP3抑制剂,可通过减少K63连接的泛素化来调节炎性体的组装和激活。Triptolidiol 具有新颖的结构特征,使其有别于已报道的 NLRP3 抑制剂,是治疗炎症性疾病的可行药物。
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引用次数: 0
The path to the G protein-coupled receptor structural landscape: Major milestones and future directions. G 蛋白偶联受体结构图谱之路:主要里程碑和未来方向。
IF 6.8 2区 医学 Q1 PHARMACOLOGY & PHARMACY Pub Date : 2024-08-29 DOI: 10.1111/bph.17314
Małgorzata M Kogut-Günthel, Zeenat Zara, Alessandro Nicoli, Alexandra Steuer, Marta Lopez-Balastegui, Jana Selent, Sanjai Karanth, Melanie Koehler, Antonella Ciancetta, Layara Akemi Abiko, Franz Hagn, Antonella Di Pizio

G protein-coupled receptors (GPCRs) play a crucial role in cell function by transducing signals from the extracellular environment to the inside of the cell. They mediate the effects of various stimuli, including hormones, neurotransmitters, ions, photons, food tastants and odorants, and are renowned drug targets. Advancements in structural biology techniques, including X-ray crystallography and cryo-electron microscopy (cryo-EM), have driven the elucidation of an increasing number of GPCR structures. These structures reveal novel features that shed light on receptor activation, dimerization and oligomerization, dichotomy between orthosteric and allosteric modulation, and the intricate interactions underlying signal transduction, providing insights into diverse ligand-binding modes and signalling pathways. However, a substantial portion of the GPCR repertoire and their activation states remain structurally unexplored. Future efforts should prioritize capturing the full structural diversity of GPCRs across multiple dimensions. To do so, the integration of structural biology with biophysical and computational techniques will be essential. We describe in this review the progress of nuclear magnetic resonance (NMR) to examine GPCR plasticity and conformational dynamics, of atomic force microscopy (AFM) to explore the spatial-temporal dynamics and kinetic aspects of GPCRs, and the recent breakthroughs in artificial intelligence for protein structure prediction to characterize the structures of the entire GPCRome. In summary, the journey through GPCR structural biology provided in this review illustrates how far we have come in decoding these essential proteins architecture and function. Looking ahead, integrating cutting-edge biophysics and computational tools offers a path to navigating the GPCR structural landscape, ultimately advancing GPCR-based applications.

G 蛋白偶联受体(GPCR)通过将信号从细胞外环境传递到细胞内部,在细胞功能中发挥着至关重要的作用。它们介导各种刺激的效应,包括激素、神经递质、离子、光子、食物味道剂和气味剂,是著名的药物靶标。结构生物学技术的进步,包括 X 射线晶体学和低温电子显微镜(cryo-EM)技术的进步,促使越来越多的 GPCR 结构得以阐明。这些结构揭示了受体活化、二聚化和寡聚化、正交调制和异位调制之间的二分法以及信号转导背后错综复杂的相互作用等新特征,为人们深入了解各种配体结合模式和信号传导途径提供了线索。然而,大部分 GPCR 种类及其激活状态在结构上仍未得到探索。未来的工作应优先考虑从多个维度捕捉 GPCR 的全部结构多样性。为此,必须将结构生物学与生物物理和计算技术结合起来。我们将在这篇综述中介绍核磁共振 (NMR) 在研究 GPCR 的可塑性和构象动力学方面的进展,原子力显微镜 (AFM) 在探索 GPCR 的时空动力学和动力学方面的进展,以及最近人工智能在蛋白质结构预测方面取得的突破,以描述整个 GPCR 的结构特征。总之,本综述提供的 GPCR 结构生物学之旅说明了我们在解码这些重要蛋白质的结构和功能方面取得的进展。展望未来,整合尖端生物物理学和计算工具将为我们提供一条通往 GPCR 结构领域的道路,最终推动基于 GPCR 的应用。
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引用次数: 0
Correction to “RTP801 is a critical factor in the neurodegeneration process of A53T a-synuclein in a mouse model of Parkinson's disease under chronic restraint stress” 更正:"RTP801是帕金森病小鼠模型中A53T a-突触核蛋白在慢性束缚应激下神经变性过程中的关键因素"。
IF 6.8 2区 医学 Q1 PHARMACOLOGY & PHARMACY Pub Date : 2024-08-29 DOI: 10.1111/bph.17323

Zhang, Z, Chu, SF, Wang, SS, Jiang, YN, Gao, Y, Yang, PF, Ai, QD, Chen, NH. RTP801 is a critical factor in the neurodegeneration process of A53T α-synuclein in a mouse model of Parkinson's disease under chronic restraint stress. Br J Pharmacol. 2018 Feb; 175(4): 590605, https://doi.org/10.1111/bph.14091

Accidental mistakes during article preparation led to wrong in Figure 8e. The images of A53T+RTP801 shRNA+CRS group in Figure 8e were incorrect. The corrected figure is provided below. All other data in Figure 8e remain unchanged, and this correction does not affect the interpretation of the results or the conclusions of the paper.

We apologise for this error.

Zhang, Z, Chu, SF, Wang, SS, Jiang, YN, Gao, Y, Yang, PF, Ai, QD, Chen, NH. RTP801是帕金森病小鼠模型在慢性束缚应激下A53T α-突触核蛋白神经变性过程中的关键因子Br J Pharmacol. 2018 Feb; 175(4):590-605, https://doi.org/10.1111/bph.14091Accidental 文章编写过程中的错误导致图 8e 中的错误。图 8e 中 A53T+RTP801 shRNA+CRS 组的图像有误。更正后的图如下。图 8e 中的所有其他数据保持不变,此次更正不影响对结果的解释或论文的结论。
{"title":"Correction to “RTP801 is a critical factor in the neurodegeneration process of A53T a-synuclein in a mouse model of Parkinson's disease under chronic restraint stress”","authors":"","doi":"10.1111/bph.17323","DOIUrl":"10.1111/bph.17323","url":null,"abstract":"<p>\u0000 <span>Zhang, Z</span>, <span>Chu, SF</span>, <span>Wang, SS</span>, <span>Jiang, YN</span>, <span>Gao, Y</span>, <span>Yang, PF</span>, <span>Ai, QD</span>, <span>Chen, NH</span>. <span>RTP801 is a critical factor in the neurodegeneration process of A53T α-synuclein in a mouse model of Parkinson's disease under chronic restraint stress</span>. <i>Br J Pharmacol.</i> <span>2018</span> Feb; <span>175</span>(<span>4</span>): <span>590</span>–<span>605</span>, https://doi.org/10.1111/bph.14091</p><p>Accidental mistakes during article preparation led to wrong in Figure 8e. The images of A53T+RTP801 shRNA+CRS group in Figure 8e were incorrect. The corrected figure is provided below. All other data in Figure 8e remain unchanged, and this correction does not affect the interpretation of the results or the conclusions of the paper.</p><p>We apologise for this error.</p>","PeriodicalId":9262,"journal":{"name":"British Journal of Pharmacology","volume":"181 20","pages":"4085"},"PeriodicalIF":6.8,"publicationDate":"2024-08-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1111/bph.17323","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142104554","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
The PARP inhibitor rucaparib blocks SARS-CoV-2 virus binding to cells and the immune reaction in models of COVID-19 在 COVID-19 模型中,PARP 抑制剂 rucaparib 阻止了 SARS-CoV-2 病毒与细胞的结合以及免疫反应。
IF 6.8 2区 医学 Q1 PHARMACOLOGY & PHARMACY Pub Date : 2024-08-27 DOI: 10.1111/bph.17305
Henrietta Papp, Emese Tóth, Judit Bóvári-Biri, Krisztina Bánfai, Péter Juhász, Mohamed Mahdi, Lilian Cristina Russo, Dávid Bajusz, Adrienn Sipos, László Petri, Tibor Viktor Szalai, Ágnes Kemény, Mónika Madai, Anett Kuczmog, Gyula Batta, Orsolya Mózner, Dorottya Vaskó, Edit Hirsch, Péter Bohus, Gábor Méhes, József Tőzsér, Nicola J. Curtin, Zsuzsanna Helyes, Attila Tóth, Nicolas C. Hoch, Ferenc Jakab, György M. Keserű, Judit E. Pongrácz, Péter Bai

Background and Purpose

To date, there are limited options for severe Coronavirus disease 2019 (COVID-19), caused by SARS-CoV-2 virus. As ADP-ribosylation events are involved in regulating the life cycle of coronaviruses and the inflammatory reactions of the host; we have, here, assessed the repurposing of registered PARP inhibitors for the treatment of COVID-19.

Experimental Approach

The effects of PARP inhibitors on virus uptake were assessed in cell-based experiments using multiple variants of SARS-CoV-2. The binding of rucaparib to spike protein was tested by molecular modelling and microcalorimetry. The anti-inflammatory properties of rucaparib were demonstrated in cell-based models upon challenging with recombinant spike protein or SARS-CoV-2 RNA vaccine.

Key Results

We detected high levels of oxidative stress and strong PARylation in all cell types in the lungs of COVID-19 patients, both of which negatively correlated with lymphocytopaenia. Interestingly, rucaparib, unlike other tested PARP inhibitors, reduced the SARS-CoV-2 infection rate through binding to the conserved 493–498 amino acid region located in the spike-ACE2 interface in the spike protein and prevented viruses from binding to ACE2. In addition, the spike protein and viral RNA-induced overexpression of cytokines was down-regulated by the inhibition of PARP1 by rucaparib at pharmacologically relevant concentrations.

Conclusion and Implications

These results point towards repurposing rucaparib for treating inflammatory responses in COVID-19.

背景和目的:迄今为止,治疗由 SARS-CoV-2 病毒引起的 2019 年严重冠状病毒病(COVID-19)的方案十分有限。由于ADP-核糖基化事件参与调节冠状病毒的生命周期和宿主的炎症反应,我们在此评估了已注册的PARP抑制剂用于治疗COVID-19的再利用情况:实验方法:在基于细胞的实验中,使用多种 SARS-CoV-2 变体评估了 PARP 抑制剂对病毒摄取的影响。通过分子建模和微量热法测试了 rucaparib 与尖峰蛋白的结合。在使用重组尖峰蛋白或SARS-CoV-2 RNA疫苗进行挑战的细胞模型中,rucaparib的抗炎特性得到了证实:我们在COVID-19患者肺部的所有细胞类型中检测到了高水平的氧化应激和强烈的PAR化,这两者与淋巴细胞减少呈负相关。有趣的是,与其他测试过的 PARP 抑制剂不同,rukaparib 通过与位于尖峰蛋白中尖峰-ACE2 界面的 493-498 氨基酸保守区结合,阻止病毒与 ACE2 结合,从而降低了 SARS-CoV-2 感染率。此外,穗状病毒蛋白和病毒 RNA 诱导的细胞因子过量表达也因药理相关浓度的 rucaparib 对 PARP1 的抑制而下调:这些结果表明,rucaparib可重新用于治疗COVID-19的炎症反应。
{"title":"The PARP inhibitor rucaparib blocks SARS-CoV-2 virus binding to cells and the immune reaction in models of COVID-19","authors":"Henrietta Papp,&nbsp;Emese Tóth,&nbsp;Judit Bóvári-Biri,&nbsp;Krisztina Bánfai,&nbsp;Péter Juhász,&nbsp;Mohamed Mahdi,&nbsp;Lilian Cristina Russo,&nbsp;Dávid Bajusz,&nbsp;Adrienn Sipos,&nbsp;László Petri,&nbsp;Tibor Viktor Szalai,&nbsp;Ágnes Kemény,&nbsp;Mónika Madai,&nbsp;Anett Kuczmog,&nbsp;Gyula Batta,&nbsp;Orsolya Mózner,&nbsp;Dorottya Vaskó,&nbsp;Edit Hirsch,&nbsp;Péter Bohus,&nbsp;Gábor Méhes,&nbsp;József Tőzsér,&nbsp;Nicola J. Curtin,&nbsp;Zsuzsanna Helyes,&nbsp;Attila Tóth,&nbsp;Nicolas C. Hoch,&nbsp;Ferenc Jakab,&nbsp;György M. Keserű,&nbsp;Judit E. Pongrácz,&nbsp;Péter Bai","doi":"10.1111/bph.17305","DOIUrl":"10.1111/bph.17305","url":null,"abstract":"<div>\u0000 \u0000 \u0000 <section>\u0000 \u0000 <h3> Background and Purpose</h3>\u0000 \u0000 <p>To date, there are limited options for severe Coronavirus disease 2019 (COVID-19), caused by SARS-CoV-2 virus. As ADP-ribosylation events are involved in regulating the life cycle of coronaviruses and the inflammatory reactions of the host; we have, here, assessed the repurposing of registered PARP inhibitors for the treatment of COVID-19.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Experimental Approach</h3>\u0000 \u0000 <p>The effects of PARP inhibitors on virus uptake were assessed in cell-based experiments using multiple variants of SARS-CoV-2. The binding of rucaparib to spike protein was tested by molecular modelling and microcalorimetry. The anti-inflammatory properties of rucaparib were demonstrated in cell-based models upon challenging with recombinant spike protein or SARS-CoV-2 RNA vaccine.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Key Results</h3>\u0000 \u0000 <p>We detected high levels of oxidative stress and strong PARylation in all cell types in the lungs of COVID-19 patients, both of which negatively correlated with lymphocytopaenia. Interestingly, rucaparib, unlike other tested PARP inhibitors, reduced the SARS-CoV-2 infection rate through binding to the conserved 493–498 amino acid region located in the spike-ACE2 interface in the spike protein and prevented viruses from binding to ACE2. In addition, the spike protein and viral RNA-induced overexpression of cytokines was down-regulated by the inhibition of PARP1 by rucaparib at pharmacologically relevant concentrations.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Conclusion and Implications</h3>\u0000 \u0000 <p>These results point towards repurposing rucaparib for treating inflammatory responses in COVID-19.</p>\u0000 </section>\u0000 </div>","PeriodicalId":9262,"journal":{"name":"British Journal of Pharmacology","volume":"181 23","pages":"4782-4803"},"PeriodicalIF":6.8,"publicationDate":"2024-08-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1111/bph.17305","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142079211","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
PDE4B inhibition by nerandomilast: Effects on lung fibrosis and transcriptome in fibrotic rats and on biomarkers in human lung epithelial cells 奈罗多米拉斯特对 PDE4B 的抑制作用:对纤维化大鼠肺纤维化和转录组以及人类肺上皮细胞生物标志物的影响
IF 6.8 2区 医学 Q1 PHARMACOLOGY & PHARMACY Pub Date : 2024-08-25 DOI: 10.1111/bph.17303
Dennis Reininger, Katrin Fundel-Clemens, Christoph H. Mayr, Lutz Wollin, Baerbel Laemmle, Karsten Quast, Peter Nickolaus, Franziska Elena Herrmann

Background and Purpose

The PDE4 family is considered a prime target for therapeutic intervention in several fibro-inflammatory diseases. We have investigated the molecular mechanisms of nerandomilast (BI 1015550), a preferential PDE4B inhibitor.

Experimental Approach

In addition to clinically relevant parameters of idiopathic pulmonary fibrosis (IPF; lung function measurement/high-resolution computed tomography scan/AI-Ashcroft score), whole-lung homogenates from a therapeutic male Wistar rat model of pulmonary fibrosis were analysed by next-generation sequencing (NGS). Data were matched with public domain data derived from human IPF samples to investigate how well the rat model reflected human IPF. We scored the top counter-regulated genes following treatment with nerandomilast in human single cells and validated disease markers discovered in the rat model using a human disease-relevant in vitro assay of IPF.

Key Results

Nerandomilast improved the decline of lung function parameters in bleomycin-treated animals. In the NGS study, most transcripts deregulated by bleomycin treatment were normalised by nerandomilast treatment. Most notably, a significant number of deregulated transcripts that were identified in human IPF disease were also found in the animal model and reversed by nerandomilast. Mapping to single-cell data revealed the strongest effects on mesenchymal, epithelial and endothelial cell populations. In a primary human epithelial cell culture system, several disease-related (bio)markers were inhibited by nerandomilast in a concentration-dependent manner.

Conclusions and Implications

This study further supports the available knowledge about the anti-inflammatory/antifibrotic mechanisms of nerandomilast and provides novel insights into the mode of action and signalling pathways influenced by nerandomilast treatment of lung fibrosis.

背景和目的:PDE4家族被认为是多种纤维炎症性疾病的主要治疗靶点。我们研究了PDE4B优先抑制剂奈罗多米拉斯特(BI 1015550)的分子机制:实验方法:除了特发性肺纤维化(IPF;肺功能测定/高分辨率计算机断层扫描/AI-Ashcroft评分)的临床相关参数外,我们还通过下一代测序(NGS)分析了治疗性雄性 Wistar 大鼠肺纤维化模型的全肺匀浆。数据与来自人类 IPF 样本的公共领域数据进行了比对,以研究大鼠模型在多大程度上反映了人类 IPF。我们对使用奈兰多吉司特治疗人类单细胞后的顶级反调控基因进行了评分,并使用与人类疾病相关的体外 IPF 试验验证了在大鼠模型中发现的疾病标志物:主要结果:奈兰多司特改善了博莱霉素治疗动物肺功能参数的下降。在NGS研究中,大多数因博莱霉素治疗而失调的转录本经奈洛多米司特治疗后恢复正常。最值得注意的是,在人类IPF疾病中发现的大量失调转录本也出现在动物模型中,并被奈兰多司特逆转。单细胞数据映射显示,对间质细胞、上皮细胞和内皮细胞群的影响最大。在原代人类上皮细胞培养系统中,奈罗多米司特以浓度依赖的方式抑制了几种与疾病相关的(生物)标记物:这项研究进一步证实了现有的关于能多司特抗炎/抗纤维化机制的知识,并为能多司特治疗肺纤维化的作用模式和信号通路提供了新的见解。
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引用次数: 0
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British Journal of Pharmacology
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