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Depletion of myeloid-derived Zbtb46+ cells improves glycemic control in obesity via the DPP4/GLP-1 pathway. 骨髓源性Zbtb46+细胞的耗竭通过DPP4/GLP-1途径改善肥胖患者的血糖控制。
IF 13 Pub Date : 2025-10-23 DOI: 10.1016/j.jare.2025.10.032
Shindy Soedono, Dan Hoang Nguyet Vo, Jiyeon Chang, Sharlene Sharlene, Princess Wendy Bayona, Sooyoung Kim, Jun Young Hong, Kae Won Cho

Introduction: Adipose tissue (AT) immune cells regulate metabolic functions in obesity through both inflammatory and non-inflammatory pathways. However, the specific roles and mechanisms of individual AT immune cell types in glycemic control remain poorly understood.

Objective: This study investigates the function of myeloid-derived Zbtb46+ cells, a major subset of peripheral dendritic cells (DCs), in established obesity.

Methods: Chimeric Zbtb46-DTR mice were generated by transplanting bone marrow from Zbtb46-DTR donors into wild-type recipients with distinct congenic markers. Obesity was induced with a high-fat diet (HFD; 60% kcal from fat), and myeloid-derived Zbtb46+ cells were selectively depleted in obese mice via diphtheria toxin (DT) injection. DC-specific Dpp4 knockout (DC-Dpp4KO) mice were generated using the Cre-loxP system and subsequently challenged with the HFD.

Results: Inducible depletion of myeloid-derived Zbtb46+ cells improves glucose homeostasis and reduces body weight in obese mice. Notably, these effects were observed even in weight-matched mice and under conditions of increased ATM accumulation, suggesting benefits independent of weight loss or AT inflammation. The improvement in glucose homeostasis was primarily mediated by elevated GLP-1 levels, which enhanced insulin secretion and decreased food intake. Increased GLP-1 was associated with decreased DPP4 activity, attributed to the depletion of ATDCs, a key contributor to circulating DPP4. Consistently, DC-specific Dpp4 deficiency confirmed that ATDC-derived DPP4 regulates GLP-1-induced insulin secretion in obesity.

Conclusions: These findings uncover a novel, non-inflammatory role for ATDCs in glucose regulation via the DPP4/GLP-1/GLP-1R axis, positioning them as promising therapeutic targets for obesity and related metabolic diseases.

脂肪组织(AT)免疫细胞通过炎症和非炎症途径调节肥胖的代谢功能。然而,个体AT免疫细胞类型在血糖控制中的具体作用和机制仍然知之甚少。目的:本研究探讨骨髓源性Zbtb46+细胞(外周树突状细胞(DCs)的一个主要亚群)在既定肥胖中的功能。方法:将Zbtb46-DTR供者的骨髓移植到具有不同同源标记的野生型受体中,生成嵌合Zbtb46-DTR小鼠。通过高脂肪饮食(HFD; 60% %卡路里来自脂肪)诱导肥胖,并通过白喉毒素(DT)注射选择性地耗尽肥胖小鼠骨髓源性Zbtb46+细胞。使用Cre-loxP系统生成dc特异性Dpp4敲除(DC-Dpp4KO)小鼠,随后用HFD刺激。结果:诱导耗损骨髓源性Zbtb46+细胞可改善肥胖小鼠的葡萄糖稳态并减轻体重。值得注意的是,即使在体重匹配的小鼠和ATM积累增加的条件下,也观察到这些效果,表明其益处独立于体重减轻或AT炎症。葡萄糖稳态的改善主要是通过升高GLP-1水平介导的,GLP-1水平提高了胰岛素分泌,减少了食物摄入。GLP-1升高与DPP4活性降低相关,这归因于atdc的消耗,atdc是循环DPP4的关键因素。一致地,dc特异性Dpp4缺乏证实atdc来源的Dpp4调节glp -1诱导的肥胖胰岛素分泌。结论:这些发现揭示了atdc通过DPP4/GLP-1/GLP-1R轴在葡萄糖调节中的一种新的非炎症作用,将其定位为肥胖和相关代谢疾病的有希望的治疗靶点。
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引用次数: 0
Artificial intelligence-driven precision treatment of reproductive medicine-related diseases: the optimal protocol choice for IVF-ET. 人工智能驱动的生殖医学相关疾病的精准治疗:IVF-ET的最佳方案选择
IF 13 Pub Date : 2025-10-23 DOI: 10.1016/j.jare.2025.10.040
Li Wen, Di Wu, Jinghan Ruan, Renjie Wang, Rui Long, Rongkai Chen, Cheng Hu, Chenxiao Tian, Yichuan Zhang, Wei Pan, Lei Jin, Shujie Liao

Introduction: Optimal ovarian stimulation (OS) selection is critical for IVF success, but expert-based decisions often lack consistency in outcomes, cost-efficiency, and personalization, highlighting the need for more individualized and data-driven approaches.

Objectives: This study propose an artificial intelligence (AI) system that analyzes extensive IVF-ET cycles to uncover OS-pregnancy outcome relationships, enabling personalized treatment recommendations while improving success rates and minimizing unnecessary costs.

Methods: This study analyzed anonymized data from 17,791 patients undergoing OS and IVF/ICSI at Tongji Hospital between May 2015 and May 2019. An adaptive AI model was developed to predict key indicators-including progesterone (P), number of oocytes retrieved (NOR), estradiol (E2), and endometrial thickness (EMT) on the hCG day-by integrating personal characteristics, ovarian reserve, and etiological factors. This model facilitated personalized OS selection, pregnancy outcome grading, and the development of an AI-driven clinical decision support system (CDSS).

Results: The key indicators-progesterone (P), number of oocytes retrieved (NOR), estradiol (E2), and endometrial thickness (EMT) on the hCG day-were used to establish a pregnancy grading system. Pregnancy rates are stratified as follows: Level IV (Total Score 15-16), 0.55; Level III (Total Score 13-14), 0.44; Level II (Total Score 11-12), 0.24; and Level I (Total Score 4-10), 0.07. After OS optimization, 1,355 patients who were initially at level I were elevated to a better level. Of the 2,341 patients initially in level II, 2,290 improved, and of the 3,839 initially in level III, 1,448 improved. Patients elevated to level IV accounted for 80 percent of all cases. The CDSS prioritized a GnRH antagonist regimen for 54.64 % of patients, resulting in per-patient time savings of 15.39-33.48 days and cost reductions of ¥989-¥2,623 compared to non-optimal to antagonist. Scaled to China's > 1 million ART cycles annually, this corresponds to projected direct savings of approximately ¥0.54-1.43 billion per year. In the new evaluation datasets (n = 4,251), implementation of CDSS recommendations increased the clinical pregnancy rate from 0.452 to 0.512 (p < 0.001) and reduced mean per-cycle cost from ¥7,385 to ¥7,242 (p = 0.018), demonstarting cost-effectiveness dominance with ICER saving of ¥2,383 per additional clinical pregnancy.

Conclusion: This AI-assisted CDSS streamlines clinicians' decision-making by enabling efficient and accurate initial judgments on OS, standardizing and personalizing recommendations, and optimizing OS for effectiveness and cost-efficiency.

最佳操作系统的选择对试管婴儿的成功至关重要,但基于专家的决策往往在结果、成本效益和个性化方面缺乏一致性,这突出了对更个性化和数据驱动方法的需求。目的:我们提出了一种人工智能系统,该系统可以分析广泛的IVF-ET周期,以揭示os与妊娠结局的关系,在提高成功率和最小化不必要成本的同时,提供个性化的治疗建议。方法:本研究分析同济医院2015年5月- 2019年5月17791例接受卵巢刺激(OS)和IVF/ICSI治疗的患者的匿名数据。开发了一个自适应人工智能模型,通过整合个人数据、卵巢储备和病因因素,预测hCG日的关键指标——黄体酮(P)、卵母细胞回收(NOR)、雌二醇(E2)和子宫内膜厚度(EMT)。该模型促进了个性化的手术系统选择、妊娠结局分级和人工智能驱动的临床决策支持系统(CDSS)的发展。结果:采用hCG给药当天的关键指标黄体酮(P)、取卵数(NOR)、雌二醇(E2)、子宫内膜厚度(EMT)建立妊娠分级体系。妊娠率分层如下:IV级(总分15-16),0.55;III级(13-14),0.44;II级(11-12),0.24;水平1(4-10),0.07。经过OS优化后,1,355名最初处于I级的患者被提升到更好的水平。在2,341例初始II级患者中,2,290例改善,3,839例初始III级患者中,1,448例改善。升至IV级的患者占所有患者的80%。CDSS对54.64% %的患者优先使用GnRH拮抗剂方案,与非最佳拮抗剂相比,每位患者节省了15.39-33.48 天的时间,降低了989- 2,623元的成本。按中国每年 > 100万次抗逆转录病毒治疗周期计算,这相当于每年预计直接节省约0.5 - 14.3亿元人民币。在新的评估数据集(n = 4,251)中,CDSS推荐的实施使临床妊娠率从0.452提高到0.512 (p )结论:人工智能辅助CDSS通过对OS进行高效准确的初步判断,标准化和个性化推荐,优化OS的有效性和成本效益,简化了临床医生的决策。
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引用次数: 0
Bioactivity and multi-omics profiling of purslane-derived nanovesicles with therapeutic implications in diabetic wounds. 马齿苋衍生纳米囊泡在糖尿病伤口治疗中的生物活性和多组学分析。
IF 13 Pub Date : 2025-10-23 DOI: 10.1016/j.jare.2025.10.042
Yang Song, Fengya Wang, Junhao Xia, Qingwen Zhang, Keman He, Lizhi Wang, Mengru Zhu, Jia Liu, Lukuan Liu, Jing Liu

Introduction: As an emerging natural nanomedicine, traditional Chinese medicine-derived exosome-like nanovesicles have shown unique potential in the treatment of chronic non-healing wounds due to their advantages such as good biocompatibility, high safety and large-scale production. However, at present, there are relatively few studies on different states and extraction processes of traditional Chinese medicine, which restricts its clinical transformation process.

Objective: This study aims to systematically compare the properties and biological activities of Portulaca oleracea L. (Purslane) derived exosome-like nanovesicles (Po-DENs) extracted from fresh and dried Purslane by using ultracentrifugation and polyethylene glycol extraction methods. The key functional metabolites and proteins were identified through multi-omics analysis, and their therapeutic potential in diabetic wound healing was verified both in vivo and in vitro.

Method: Fresh and dried Portulaca oleracea L. samples were treated by ultracentrifugation and polyethylene glycol precipitation methods, and four kinds of plant nanovesicles were separated. Their physical properties such as particle size were characterized. The composition of the vesicles was determined through metabolomics and proteomics. The proliferation, antioxidant, anti-apoptotic and anti-inflammatory effects of four types of vesicles on skin keratinocytes and fibroblasts were investigated, and the mechanism was analyzed through proteomics. And it was finally verified in the wound healing model of diabetic mice to confirm its therapeutic activity and biological safety.

Result: The results demonstrated that fresh Purslane-derived nanovesicles isolated by ultracentrifugation (F-Po-UC) exhibited superior bioactivity compared to other extraction methods and dried material preparations. Omics analyses further revealed that F-Po-UC is enriched with a wide range of metabolites and proteins, which act through signaling pathways related to tissue regeneration. Subsequent vivo studies demonstrated that dressings based on Purslane-derived vesicles significantly accelerated wound healing in a diabetic mouse model, confirming their potential as an innovative therapeutic strategy.

Conclusion: Fresh Purslane-derived nanovesicles demonstrate exceptional therapeutic potential for diabetic wound healing through their potent proliferative, antioxidant, and anti-inflammatory effects, supported by multi-omics characterization and robust in vivo validation.

摘要:中药衍生的类外泌体纳米囊泡作为一种新兴的天然纳米药物,因其生物相容性好、安全性高、可大规模生产等优点,在治疗慢性不愈合伤口方面显示出独特的潜力。但目前对中药不同状态及提取工艺的研究相对较少,制约了其临床转化过程。目的:系统比较用超离心和聚乙二醇提取法从新鲜和干燥原料中提取的马齿苋(马齿苋)衍生囊泡(Po-DENs)的性质和生物活性。通过多组学分析鉴定了关键功能代谢物和蛋白,并在体内和体外验证了它们在糖尿病伤口愈合中的治疗潜力。方法:采用超离心和聚乙二醇沉淀法对马马苋鲜、干样品进行处理,分离出4种植物纳米囊泡。对它们的物理性质如粒径进行了表征。通过代谢组学和蛋白质组学测定囊泡的组成。研究四种囊泡对皮肤角质形成细胞和成纤维细胞的增殖、抗氧化、抗凋亡和抗炎作用,并通过蛋白质组学分析其作用机制。最后通过糖尿病小鼠创面愈合模型验证其治疗活性和生物学安全性。结果:通过超离心分离得到的新鲜马齿苋纳米囊泡(F-Po-UC)具有较好的生物活性。组学分析进一步表明,F-Po-UC富含多种代谢物和蛋白质,这些代谢物和蛋白质通过与组织再生相关的信号通路起作用。随后的体内研究表明,基于马齿苋衍生囊泡的敷料显著加速了糖尿病小鼠模型的伤口愈合,证实了它们作为一种创新治疗策略的潜力。结论:新鲜马齿苋衍生的纳米囊泡具有强大的增殖、抗氧化和抗炎作用,具有特殊的治疗糖尿病伤口愈合的潜力,这得到了多组学表征和强大的体内验证的支持。
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引用次数: 0
Screening of manganese-resistant bacteria and their synergistic effect with Koelreuteria paniculata on remediation of manganese-contaminated soil. 耐锰细菌的筛选及其与黄连对锰污染土壤修复的协同效应。
IF 13 Pub Date : 2025-10-22 DOI: 10.1016/j.jare.2025.10.033
Jinsong He, Jieyu Dong, Xiaohong Wu, Fen He, Wenfei Kang, Jun Wang, Wei Wang, Wende Yan

Introduction: Plant-microbe collaborative remediation is a highly promising heavy metal remediation strategy. However, its remediation efficiency for manganese (Mn) tailings and its underlying mechanism remain inadequately explored.

Objectives: This study aimed to screen microbial strains capable of remediating Mn contamination and evaluate the potential of these strains to enhance the remediation of heavy metal-contaminated soils through plant-microbe interactions.

Methods: Bacterial strains with both Mn resistance and plant growth-promoting characteristics were isolated from the rhizosphere of plants in Mn tailings. Two selected strains were inoculated to the rhizosphere of 2-year-old Koelreuteria paniculata seedlings in non-polluted soil or in Mn tailings. The effectiveness of the strains in remediating Mn tailings was evaluated by measuring the growth, photosynthetic characteristics, antioxidant enzyme activity, Mn accumulation capacity of K. paniculata, and overall soil remediation effect.

Results: This study selected two Mn resistance and plant growth-promoting bacteria, including Bacillus cereus (EA-1) and Priestia megaterium (BN-4). Functioanl groups identified by Fourier transform infrared spectroscopy (FTIR), such as hydroxyl and phosphate groups, are essential for Mn adsorption on the bacterial surface. In Mn tailings, inoculation with the BN-4 strain significantly increased superoxide dismutase (SOD) and catalase (CAT) activities in the leaves of K. paniculata by 201.57% and 34.48%, respectively, compared to the uninoculated treatment. However, inoculation with the EA-1 strain enhanced the root, stem, and leaf biomass, net photosynthetic rate, stomatal conductance, Mn accumulation, and bioconcentration factor (BCF) of K. paniculata by 72.70%, 47.82%, 51.32%, 81.38 %, 86.05%, 113.09% and 76.19%, respectively, compared to the uninoculated treatment.

Conclusion: Considering the growth of K. paniculata and its capacity for Mn accumulation and BCF, inoculation with the EA-1 strain is a more favorable approach for remediation of Mn tailings.

植物-微生物协同修复是一种极具发展前景的重金属修复策略。然而,其对锰尾矿的修复效果及其机制尚未充分探讨。目的:筛选能够修复锰污染的微生物菌株,并评价这些菌株通过植物-微生物相互作用增强重金属污染土壤修复的潜力。方法:从锰尾矿植物根际分离得到一株具有抗锰和促生长双重特性的细菌。采用盆栽试验方法,分别在无污染土壤和锰尾矿中接种2年生的穗榆幼苗。通过菌株生长、光合特性、抗氧化酶活性、金针兰Mn积累能力和土壤整体修复效果等指标,评价菌株对锰污染土壤的修复效果。结果:鉴定出蜡样芽孢杆菌(Bacillus cereus, EA-1)和巨芽孢杆菌(Priestia megaterium, BN-4) 2株耐锰菌。傅里叶变换红外光谱(FTIR)鉴定了细菌表面的关键官能团,如羟基和磷酸基团,它们在Mn的吸附中起关键作用。在Mn尾矿中,接种BN-4菌株可显著提高金针叶超氧化物歧化酶(SOD)和过氧化氢酶(CAT)活性,分别比未接种处理提高201.57%和34.48%。接种EA-1菌株后,根、茎、叶生物量、净光合速率、气孔导度、Mn积累量和生物浓缩因子(BCF)分别比未接种处理提高了72.70%、47.82%、51.32%、81.38%、86.05%、113.09%和76.19%。结论:考虑到金针菇的生长、积累Mn的能力和BCF的能力,接种EA-1菌株是一种较为有利的锰尾矿修复方法。
{"title":"Screening of manganese-resistant bacteria and their synergistic effect with Koelreuteria paniculata on remediation of manganese-contaminated soil.","authors":"Jinsong He, Jieyu Dong, Xiaohong Wu, Fen He, Wenfei Kang, Jun Wang, Wei Wang, Wende Yan","doi":"10.1016/j.jare.2025.10.033","DOIUrl":"10.1016/j.jare.2025.10.033","url":null,"abstract":"<p><strong>Introduction: </strong>Plant-microbe collaborative remediation is a highly promising heavy metal remediation strategy. However, its remediation efficiency for manganese (Mn) tailings and its underlying mechanism remain inadequately explored.</p><p><strong>Objectives: </strong>This study aimed to screen microbial strains capable of remediating Mn contamination and evaluate the potential of these strains to enhance the remediation of heavy metal-contaminated soils through plant-microbe interactions.</p><p><strong>Methods: </strong>Bacterial strains with both Mn resistance and plant growth-promoting characteristics were isolated from the rhizosphere of plants in Mn tailings. Two selected strains were inoculated to the rhizosphere of 2-year-old Koelreuteria paniculata seedlings in non-polluted soil or in Mn tailings. The effectiveness of the strains in remediating Mn tailings was evaluated by measuring the growth, photosynthetic characteristics, antioxidant enzyme activity, Mn accumulation capacity of K. paniculata, and overall soil remediation effect.</p><p><strong>Results: </strong>This study selected two Mn resistance and plant growth-promoting bacteria, including Bacillus cereus (EA-1) and Priestia megaterium (BN-4). Functioanl groups identified by Fourier transform infrared spectroscopy (FTIR), such as hydroxyl and phosphate groups, are essential for Mn adsorption on the bacterial surface. In Mn tailings, inoculation with the BN-4 strain significantly increased superoxide dismutase (SOD) and catalase (CAT) activities in the leaves of K. paniculata by 201.57% and 34.48%, respectively, compared to the uninoculated treatment. However, inoculation with the EA-1 strain enhanced the root, stem, and leaf biomass, net photosynthetic rate, stomatal conductance, Mn accumulation, and bioconcentration factor (BCF) of K. paniculata by 72.70%, 47.82%, 51.32%, 81.38 %, 86.05%, 113.09% and 76.19%, respectively, compared to the uninoculated treatment.</p><p><strong>Conclusion: </strong>Considering the growth of K. paniculata and its capacity for Mn accumulation and BCF, inoculation with the EA-1 strain is a more favorable approach for remediation of Mn tailings.</p>","PeriodicalId":94063,"journal":{"name":"Journal of advanced research","volume":" ","pages":""},"PeriodicalIF":13.0,"publicationDate":"2025-10-22","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145369175","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Modeling homosynaptic and heterosynaptic plasticity with a single neuromemristive synapse. 用单个神经记忆突触模拟同突触和异突触的可塑性。
IF 13 Pub Date : 2025-10-22 DOI: 10.1016/j.jare.2025.10.031
Zubaer Ibna Mannan, Sami Azam, Ram Kaji Budhathoki, M D Nur Alam, Hyongsuk Kim

Introduction: Efforts are being made to design a brain-like intelligence due to its robustness, synaptic modification (i.e., learning and memory), analog synaptic multiplication, multi-state storage, ultra-low power consumption, and parallel computation. However, current bioelectronic and biomedical technologies have yet to fully replicate brain-like intelligence. In particular, devices that can emulate both homosynaptic and heterosynaptic plasticity remain extremely limited.

Objectives: This work presents a neuromemristive synapse capable of replicating key biological features, including homosynaptic and heterosynaptic plasticity. The proposed synapse uses a memristor, a promising candidate for achieving bio-realistic features of synapse due to its low power consumption, multi-state operation, analog behavior, high data storage durability, and CMOS compatibility.

Methods: The artificial synapse is designed as a composite 1-port structure consisting of a memristor (M) and a controlled capacitor (CCon). The memristor is responsible for emulating synaptic plasticity in response to distinct brainwave patterns, while the capacitor modulates the discharge rate through the memristor. During the active input phase (synaptic potentiation), the composite 1-port charges up. During the inactive phase (synaptic depression), CCon governs the discharging of the memristor, enabling full or partial discharging through memory fading or homosynaptic and heterosynaptic depression pathways.

Results: We designed the proposed synapse in SPICE and validated its bio-functionalities through various simulations. The proposed synapse demonstrates low power consumption and replicates key neurobiological processes for learning and memory such as heterosynaptic homeostasis, modular input specificity, associativity, and homosynaptic long-term and short-term potentiation and depression (LTP, LTD, STF, STD), along with memory fading effect (MFE), and strong stimulation (SST).

Conclusion: The proposed synapse bio-realistically mimics synaptic plasticity, neurotransmitter dynamics, and neuronal responses. Implemented using off-the-shelf components, it supports both volatile and non-volatile modes, making it suitable for CMOS integration. This enables advancements in spiking neural networks, brain function analysis, and scalable neuromorphic computing systems.

由于其鲁棒性、突触修改(即学习和记忆)、模拟突触乘法、多状态存储、超低功耗和并行计算,人们正在努力设计一种类脑智能。然而,目前的生物电子和生物医学技术还不能完全复制类脑智能。特别是,能够模拟同突触和异突触可塑性的设备仍然非常有限。目的:这项工作提出了一个神经记忆突触能够复制关键的生物学特征,包括同突触和异突触可塑性。所提出的突触使用忆阻器,由于其低功耗、多状态操作、模拟行为、高数据存储耐久性和CMOS兼容性,忆阻器有望实现突触的生物逼真特性。方法:将人工突触设计为由忆阻器(M)和可控电容器(CCon)组成的复合1端口结构。忆阻器负责模拟突触的可塑性,以响应不同的脑电波模式,而电容器通过忆阻器调节放电速率。在主动输入阶段(突触增强),复合1端口充电。在非活动阶段(突触抑制),CCon控制忆阻器的放电,通过记忆消退或同突触和异突触抑制通路实现完全或部分放电。结果:我们在SPICE中设计了所提出的突触,并通过各种模拟验证了其生物功能。所提出的突触具有低功耗,并复制了学习和记忆的关键神经生物学过程,如异突触稳态、模块化输入特异性、联想性、同突触长期和短期增强和抑制(LTP, LTD, STF, STD),以及记忆消退效应(MFE)和强刺激(SST)。结论:该突触生物逼真地模拟了突触可塑性、神经递质动力学和神经元反应。它使用现成的组件实现,支持易失性和非易失性模式,适合CMOS集成。这使得在脉冲神经网络,脑功能分析和可扩展的神经形态计算系统的进步。
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引用次数: 0
Heterogeneity of urinary system tumors: novel avenues for targeted therapy and precision medicine. 泌尿系统肿瘤的异质性:靶向治疗和精准医学的新途径。
IF 13 Pub Date : 2025-10-22 DOI: 10.1016/j.jare.2025.10.026
Hao Chen, Yang Weng, Donghan Zheng, Tian Li, Nan Xu, Longdan Kang, Liang Feng

Background: Urinary system tumors, including bladder, kidney, and prostate cancers, impose a substantial health burden worldwide and exhibit significant molecular and genetic heterogeneity.

Aim: of Review: This review delves into the intricate landscape of targeted therapy for urinary system tumors and its pivotal role in advancing precision medicine. Key Scientific Concepts of Review: Urinary system tumors include kidney cancer, bladder cancer, and prostate cancer. They exhibit remarkable heterogeneity at the molecular level, which challenges the effectiveness of conventional treatments. Compared with conventional therapy, precision medicine is a tailored approach that customizes treatments for individual patients on the basis of their unique genetic, molecular, and clinical profiles. In general, precision medicine discovers targets through multiomics data, and targeted therapy develops drugs on the basis of these targets. Targeted therapy focuses on the discernment of specific molecular or genetic aberrations that are distinct to cancer cells, thereby demarcating them from their healthy counterparts. Several molecular targets driving these malignancies are summarized among the current state of approved targeted therapies. Limitations include the emergence of resistance mechanisms and the potential for adverse effects. In the pursuit of precision medicine, this review scrutinizes innovative approaches, including biomarker utilization, genomics, and personalized treatments, which demonstrate potential in customizing therapies to individual patients. In conclusion, this review illuminates the pivotal role of targeted therapy in the context of heterogeneous urinary system tumors and underscores its potential to drive the precision medicine paradigm forward.

背景:泌尿系统肿瘤,包括膀胱癌、肾癌和前列腺癌,在世界范围内造成了巨大的健康负担,并表现出显著的分子和遗传异质性。综述目的:本综述深入探讨泌尿系统肿瘤靶向治疗的复杂前景及其在推进精准医学中的关键作用。综述关键科学概念:泌尿系统肿瘤包括肾癌、膀胱癌和前列腺癌。它们在分子水平上表现出显著的异质性,这对传统治疗的有效性提出了挑战。与传统疗法相比,精准医学是一种量身定制的方法,根据患者独特的基因、分子和临床特征为其量身定制治疗方法。一般来说,精准医学通过多组学数据发现靶点,靶向治疗在这些靶点的基础上开发药物。靶向治疗侧重于识别癌细胞特有的特定分子或遗传畸变,从而将它们与健康细胞区分开来。总结了目前批准的靶向治疗中驱动这些恶性肿瘤的几个分子靶点。限制包括耐药性机制的出现和潜在的不良影响。在追求精准医疗的过程中,本综述仔细审查了创新方法,包括生物标志物利用、基因组学和个性化治疗,这些方法显示了针对个体患者定制治疗的潜力。总之,本综述阐明了靶向治疗在异质性泌尿系统肿瘤中的关键作用,并强调了其推动精准医学范式向前发展的潜力。
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引用次数: 0
Active polymerization regions of G and S monolignols show different temporal and spatial change patterns in the multicellular space during lignification and its inhibition of the fruit flesh. 木质素化及其对果肉的抑制作用在多细胞空间中表现出不同的时间和空间变化规律。
IF 13 Pub Date : 2025-10-22 DOI: 10.1016/j.jare.2025.10.029
Jiayue Jin, Yibo Liu, Weinan Huang, Zihan Cai, Di Wu, Wei Zeng, Yanna Shi, Xian Li, Kunsong Chen

Introduction: Some fruits are vulnerable to chilling lignification during cold storage. However, the active polymerization cell regions of guaiacyl (G) and sinapyl (S) lignin units in fruit flesh during lignification and their dynamic change patterns are unclear. We have visualized G-unit lignin in fruit flesh cells, but there is no method for imaging the active polymerization regions of S monolignol.

Objective: This work aims to understand the cell dynamics mechanism of newly synthesized G- and S-unit lignin in fruit flesh during postharvest lignification from both accumulation and inhibition perspectives.

Methods: A bioorthogonal chemical labeling method to label S-unit lignin in fruit flesh cells was established. Then, using loquat fruit as the research object, and the newly synthesized G- and S-unit lignin in loquat fruit flesh during postharvest lignification was visualized. Moreover, for the inhibition study, we prepared methyl jasmonate (MeJA) hydrogel beads that could continuously inhibit the lignification during postharvest storage.

Results: The polymerization of G monolignol tended to be active in the middle lamella of the parenchyma cells during early storage, whereas the polymerization of S monolignol tended to be active in the cell corner during late storage. Besides, the change patterns of vascular bundles and lignified cells were different from the parenchyma cells. Furthermore, a hydrogel bead capable of continuously releasing MeJA was prepared and used to inhibit the lignification. Results demonstrated that the inhibitory effects on G- and S-unit lignin were concentrated on the parenchyma cells, and there were also spatiotemporally specific, whereas the effects on vascular bundles and lignified cells were limited.

Conclusion: The newly synthesized S-unit lignin in fruit flesh was visualized for the first time. Distinct spatiotemporal polymerization patterns of G- and S-unit lignin were found during postharvest lignification and its inhibition, and the corresponding cellular model was proposed.

一些水果在冷藏过程中容易发生木质化。然而,在木质化过程中,愈创木酰(G)和sinapyl (S)木质素单元在果肉中的活性聚合细胞区域及其动态变化规律尚不清楚。我们已经在果肉细胞中可视化了g单位木质素,但是没有方法来成像S单分子木质素的活性聚合区域。目的:从积累和抑制两方面了解果实采后木质化过程中新合成的G和s单位木质素的细胞动力学机制。方法:建立了一种生物正交化学标记方法,对果肉细胞中的s单元木质素进行标记。然后,以枇杷果实为研究对象,对采后木质素化过程中枇杷果肉中新合成的G-和s -单位木质素进行了可视化处理。此外,对于抑制研究,我们制备了MeJA水凝胶珠,可以在采后储存期间持续抑制木质素化。结果:在贮藏早期,G单脂醇的聚合倾向于在薄壁细胞的中间片层中活跃,而S单脂醇的聚合倾向于在贮藏后期的细胞角层中活跃。此外,维管束和木质化细胞的变化模式与薄壁细胞不同。制备了一种连续释放茉莉酸甲酯(MeJA)的水凝胶珠,并用于抑制木质素化。结果表明,对G和s单位木质素的抑制作用主要集中在薄壁细胞上,且具有时空特异性,而对维管束和木质素化细胞的抑制作用有限。结论:新合成的s -单位木质素首次在果肉中可见。在采后木质素化及其抑制过程中,发现G-和s -单位木质素具有不同的时空聚合模式,并提出了相应的细胞模型。
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引用次数: 0
KRAS/ACTN4/p65-NR2A axis mediates glutamine-glutamate metabolic coupling between schwann cells and pancreatic cancer promoting perineural invasion. KRAS/ACTN4/p65-NR2A轴介导雪旺细胞与胰腺癌之间谷氨酰胺-谷氨酸代谢偶联促进神经周围侵袭。
IF 13 Pub Date : 2025-10-22 DOI: 10.1016/j.jare.2025.10.030
Zhenfeng Tian, Mingxin Su, Miao Yu, Enlai Huang, Bingrong Hu, Yinting Chen

Introduction: Pancreatic ductal adenocarcinoma (PDAC) exhibits aggressive perineural invasion (PNI), a hallmark of poor prognosis observed in 70-100% of cases. Schwann cells (SCs), key components of the tumor microenvironment, drive PNI via multiple pathways, yet the underlying mechanisms remain unclear.

Objectives: This study investigates the hypothesis that PDAC cells and SCs establish a glutamine-glutamate metabolic symbiosis to fuel PNI.

Methods: Integrated approaches, including LC-MS metabolomics, isotopic tracing, co-culture systems, and in vivo models, were employed to analyze bidirectional metabolite exchange. Molecular assays and functional studies elucidated signaling pathways. The therapeutic potential of targeting glutamine transporters (SLC1A5/SLC7A5) and glutamate receptor NR2A was tested using inhibitors V9302 and PEAQX.

Results: SCs secreted glutamine, which PDAC cells internalized via SLC1A5 and converted to glutamate. Glutamate activated SCs through NR2A, inducing ROS/NRF2-expression and upregulating glutamine synthetase (GS) and GLT-1, thereby regenerating glutamine to sustain the metabolic loop. KRAS-ACTN4-p65 signaling amplified this cycle by transcriptionally activating SLC1A5/SLC7A5 and GLS, while leucine uptake via SLC7A5 activated mTORC1 to promote invasion and PNI. In vivo, dual inhibition of SLC1A5/SLC7A5 (V9302) and NR2A (PEAQX) synergistically reduced tumor growth, PNI length, and improved sciatic nerve function in mice.

Conclusion: This study identifies a reciprocal glutamine-glutamate metabolic symbiosis between PDAC cells and SCs as a driver of PNI, orchestrated by KRAS-ACTN4-NF-κB signaling and glutamate-NR2A-ROS-NRF2 pathways. Disrupting this axis with V9302 and PEAQX offers a novel therapeutic strategy to target PDAC's metabolic adaptability and neurotrophic microenvironment.

胰腺导管腺癌(PDAC)表现为侵袭性神经周围浸润(PNI),在70-100%的病例中观察到预后不良的标志。许旺细胞(SCs)是肿瘤微环境的关键组成部分,通过多种途径驱动PNI,但其潜在机制尚不清楚。目的:本研究探讨PDAC细胞和SCs建立谷氨酰胺-谷氨酸代谢共生关系以促进PNI的假说。方法:采用LC-MS代谢组学、同位素示踪、共培养系统和体内模型等综合方法分析双向代谢物交换。分子分析和功能研究阐明了信号通路。使用抑制剂V9302和PEAQX检测靶向谷氨酰胺转运体(SLC1A5/SLC7A5)和谷氨酸受体NR2A的治疗潜力。结果:sc分泌谷氨酰胺,PDAC细胞通过SLC1A5内化转化为谷氨酸。谷氨酸通过NR2A激活SCs,诱导ROS/ nrf2表达,上调谷氨酰胺合成酶(glutamine synthetase, GS)和GLT-1,从而再生谷氨酰胺维持代谢循环。KRAS-ACTN4-p65信号通过转录激活SLC1A5/SLC7A5和GLS来放大这一周期,而通过SLC7A5激活亮氨酸摄取mTORC1来促进侵袭和PNI。在体内,SLC1A5/SLC7A5 (V9302)和NR2A (PEAQX)的双重抑制可协同降低小鼠肿瘤生长、PNI长度并改善坐骨神经功能。结论:本研究发现PDAC细胞和SCs之间的谷氨酰胺-谷氨酸代谢互惠共生是PNI的驱动因素,由KRAS-ACTN4-NF-κB信号通路和谷氨酸- nr2a - ros - nrf2通路协调。用V9302和PEAQX破坏该轴提供了一种针对PDAC代谢适应性和神经营养微环境的新治疗策略。
{"title":"KRAS/ACTN4/p65-NR2A axis mediates glutamine-glutamate metabolic coupling between schwann cells and pancreatic cancer promoting perineural invasion.","authors":"Zhenfeng Tian, Mingxin Su, Miao Yu, Enlai Huang, Bingrong Hu, Yinting Chen","doi":"10.1016/j.jare.2025.10.030","DOIUrl":"10.1016/j.jare.2025.10.030","url":null,"abstract":"<p><strong>Introduction: </strong>Pancreatic ductal adenocarcinoma (PDAC) exhibits aggressive perineural invasion (PNI), a hallmark of poor prognosis observed in 70-100% of cases. Schwann cells (SCs), key components of the tumor microenvironment, drive PNI via multiple pathways, yet the underlying mechanisms remain unclear.</p><p><strong>Objectives: </strong>This study investigates the hypothesis that PDAC cells and SCs establish a glutamine-glutamate metabolic symbiosis to fuel PNI.</p><p><strong>Methods: </strong>Integrated approaches, including LC-MS metabolomics, isotopic tracing, co-culture systems, and in vivo models, were employed to analyze bidirectional metabolite exchange. Molecular assays and functional studies elucidated signaling pathways. The therapeutic potential of targeting glutamine transporters (SLC1A5/SLC7A5) and glutamate receptor NR2A was tested using inhibitors V9302 and PEAQX.</p><p><strong>Results: </strong>SCs secreted glutamine, which PDAC cells internalized via SLC1A5 and converted to glutamate. Glutamate activated SCs through NR2A, inducing ROS/NRF2-expression and upregulating glutamine synthetase (GS) and GLT-1, thereby regenerating glutamine to sustain the metabolic loop. KRAS-ACTN4-p65 signaling amplified this cycle by transcriptionally activating SLC1A5/SLC7A5 and GLS, while leucine uptake via SLC7A5 activated mTORC1 to promote invasion and PNI. In vivo, dual inhibition of SLC1A5/SLC7A5 (V9302) and NR2A (PEAQX) synergistically reduced tumor growth, PNI length, and improved sciatic nerve function in mice.</p><p><strong>Conclusion: </strong>This study identifies a reciprocal glutamine-glutamate metabolic symbiosis between PDAC cells and SCs as a driver of PNI, orchestrated by KRAS-ACTN4-NF-κB signaling and glutamate-NR2A-ROS-NRF2 pathways. Disrupting this axis with V9302 and PEAQX offers a novel therapeutic strategy to target PDAC's metabolic adaptability and neurotrophic microenvironment.</p>","PeriodicalId":94063,"journal":{"name":"Journal of advanced research","volume":" ","pages":""},"PeriodicalIF":13.0,"publicationDate":"2025-10-22","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145369132","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Programmable microbial therapeutics: advances in engineered bacteria for targeted in vivo delivery and precision medicine. 可编程微生物疗法:用于体内靶向递送和精准医疗的工程细菌的进展。
IF 13 Pub Date : 2025-10-22 DOI: 10.1016/j.jare.2025.10.028
Lu Zhao, Jiaoyu Xin, Mingyang Hu, Chenyu Xue, Na Dong

Background: Bioengineered bacteria have emerged as versatile, programmable platforms for in vivo drug delivery. By integrating gene editing, synthetic gene circuits, targeted surface modifications, and environment‑responsive triggers, these living vectors can home to specific tissues and dynamically release therapeutic molecules in response to local cues. Recent advances have demonstrated their potential across oncology, immunomodulation, infectious disease control, and inflammatory disorders, yet challenges in stability, biosafety, and regulatory approval remain.

Aim of review: This review synthesizes the latest developments in programmable microbial therapeutics, focusing on engineering strategies and delivery system designs that enhance precision, efficacy, and safety. We evaluate proof‑of‑concept applications in disease models and identify critical bottlenecks hindering clinical translation, with the goal of guiding future research toward robust, personalized microbial interventions.

Key scientific concepts of review: This review centers on four main areas. First, programmable gene circuits and biosensors enable conditional drug release only when desired. Second, targeting strategies-such as adhesion molecules and microenvironmental cues-guide bacteria to disease sites. Third, delivery system designs (e.g., encapsulation and surface coating) improve bacterial survival and payload stability. Fourth, expression-optimization methods fine-tune therapeutic output levels. We also discuss biosafety measures like kill-switches and auxotrophy, and outline future directions including intelligent feedback loops, multifunctional circuits, and streamlined regulatory pathways.

背景:生物工程细菌已经成为一种多功能的、可编程的体内给药平台。通过整合基因编辑、合成基因电路、靶向表面修饰和环境响应触发器,这些活载体可以进入特定组织,并根据局部提示动态释放治疗分子。最近的进展已经证明了它们在肿瘤学、免疫调节、传染病控制和炎症性疾病方面的潜力,但在稳定性、生物安全性和监管批准方面仍然存在挑战。综述目的:本文综述了可编程微生物治疗的最新进展,重点介绍了提高精确性、有效性和安全性的工程策略和给药系统设计。我们评估了疾病模型中概念验证的应用,并确定了阻碍临床转化的关键瓶颈,目标是指导未来研究朝着稳健、个性化的微生物干预方向发展。综述的关键科学概念:本文主要围绕四个方面进行综述。首先,可编程基因电路和生物传感器使药物只有在需要时才有条件释放。其次,靶向策略——如粘附分子和微环境线索——引导细菌到达疾病部位。第三,递送系统设计(例如,封装和表面涂层)提高细菌存活率和有效载荷稳定性。第四,表达优化方法微调治疗输出水平。我们还讨论了生物安全措施,如死亡开关和缺陷控制,并概述了未来的发展方向,包括智能反馈回路,多功能电路和精简的监管途径。
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引用次数: 0
Divergence between neural and retinal lineage specification during human brain development by signal transduction. 神经和视网膜谱系分化在人脑发育过程中的信号转导。
IF 13 Pub Date : 2025-10-22 DOI: 10.1016/j.jare.2025.10.034
Ki Hong Nam, Sang Ah Yi, Lin-Fan Xiao, Jae Sung Noh, Min Gyu Lee, Jae Kyun Jeong, Hyewon Jung, Ning-Yi Shao, Jeung-Whan Han, Jaecheol Lee

Introduction: The physiological functions of p70 S6 kinase 1 (S6K1) have been extensively studied in S6K1-deficient mice. However, there is limited evidence demonstrating the influence of S6K1 deletion on human brain development.

Objectives: In this study, we identify the role of S6K1 in human brain development utilizing genetically engineered human embryonic stem cell-derived brain organoids.

Methods: Dorsal forebrain organoids generated from S6K1-depleted human embryonic stem cells (hESCs) were analyzed through single-cell RNA sequencing at early (5 weeks) and late (14 weeks) stages. In addition, the brain organoids derived from co-cultured S6K1-deleted and wild-type hESCs were subjected to ATAC-sequencing.

Results: Genetic deletion of S6K1 significantly decreases the size of the dorsal forebrain organoids in the early stages. Single-cell RNA sequencing analysis shows an abnormal emergence of retinal cell lineages in S6K1-deleted brain organoids, which diverges from cortical neurons in the early stage, eventually leading to a decrease in the proportion of mature cortical neurons. The chromatin accessibility analysis of co-cultured brain organoids shows that retinal specification in S6K1 knockout organoids was due to non-cell-autonomous function, whereas incomplete maturation of neurons results from cell-autonomous function.

Conclusion: Depletion of S6K1 signaling in the early stage of human brain development drives the formation of retinal cells distinct from cortical neurons. Our findings demonstrate that S6K1 signaling fine-tunes neuronal and retinal lineage specification during brain development.

p70 S6激酶1 (S6K1)的生理功能在S6K1缺陷小鼠中得到了广泛的研究。然而,证明S6K1缺失对人类大脑发育影响的证据有限。目的:在本研究中,我们利用基因工程人类胚胎干细胞衍生的脑类器官确定S6K1在人脑发育中的作用。方法:通过单细胞RNA测序,对s6k1缺失的人胚胎干细胞(hESCs)在早期(5 周)和晚期(14 周)产生的背前脑类器官进行分析。此外,对共培养的s6k1缺失hESCs和野生型hESCs衍生的脑类器官进行atac测序。结果:S6K1基因缺失可显著降低早期背前脑类器官的大小。单细胞RNA测序分析显示,在s6k1缺失的脑类器官中,视网膜细胞系出现异常,在早期阶段从皮质神经元分化,最终导致成熟皮质神经元部分减少。共培养脑类器官的染色质可及性分析表明,S6K1敲除类器官的视网膜特异性是由于非细胞自主功能,而神经元的不完全成熟是由于细胞自主功能。结论:在人类大脑发育早期,S6K1信号的缺失驱动了不同于皮质神经元的视网膜细胞的形成。我们的研究结果表明,S6K1信号在大脑发育过程中微调神经元和视网膜谱系的规范。
{"title":"Divergence between neural and retinal lineage specification during human brain development by signal transduction.","authors":"Ki Hong Nam, Sang Ah Yi, Lin-Fan Xiao, Jae Sung Noh, Min Gyu Lee, Jae Kyun Jeong, Hyewon Jung, Ning-Yi Shao, Jeung-Whan Han, Jaecheol Lee","doi":"10.1016/j.jare.2025.10.034","DOIUrl":"10.1016/j.jare.2025.10.034","url":null,"abstract":"<p><strong>Introduction: </strong>The physiological functions of p70 S6 kinase 1 (S6K1) have been extensively studied in S6K1-deficient mice. However, there is limited evidence demonstrating the influence of S6K1 deletion on human brain development.</p><p><strong>Objectives: </strong>In this study, we identify the role of S6K1 in human brain development utilizing genetically engineered human embryonic stem cell-derived brain organoids.</p><p><strong>Methods: </strong>Dorsal forebrain organoids generated from S6K1-depleted human embryonic stem cells (hESCs) were analyzed through single-cell RNA sequencing at early (5 weeks) and late (14 weeks) stages. In addition, the brain organoids derived from co-cultured S6K1-deleted and wild-type hESCs were subjected to ATAC-sequencing.</p><p><strong>Results: </strong>Genetic deletion of S6K1 significantly decreases the size of the dorsal forebrain organoids in the early stages. Single-cell RNA sequencing analysis shows an abnormal emergence of retinal cell lineages in S6K1-deleted brain organoids, which diverges from cortical neurons in the early stage, eventually leading to a decrease in the proportion of mature cortical neurons. The chromatin accessibility analysis of co-cultured brain organoids shows that retinal specification in S6K1 knockout organoids was due to non-cell-autonomous function, whereas incomplete maturation of neurons results from cell-autonomous function.</p><p><strong>Conclusion: </strong>Depletion of S6K1 signaling in the early stage of human brain development drives the formation of retinal cells distinct from cortical neurons. Our findings demonstrate that S6K1 signaling fine-tunes neuronal and retinal lineage specification during brain development.</p>","PeriodicalId":94063,"journal":{"name":"Journal of advanced research","volume":" ","pages":""},"PeriodicalIF":13.0,"publicationDate":"2025-10-22","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145369154","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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