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Updated Progress on Mass Spectrometry Imaging and its Application in Cancer Treatment and Drug Discovery. 质谱成像及其在癌症治疗和药物发现中的应用的最新进展。
Pub Date : 2024-01-23 DOI: 10.2174/0115748928269691231203164021
Mingyue Li, Jingna Zhou, Tingting Zhang, Jingyang Lu, Yajie Wang, Junyu Liu, Xiaoyu Zhang, Haixia Chen

Background: Mass spectrometry imaging (MSI) is an imaging method based on mass spectrometry technology that can simultaneously visualize the spatial distribution of various biological molecules. The use of MSI in cancer detection and drug discovery has been extensively investigated in recent years.

Objective: This review aims to summarize the latest advances of MSI and its specific applications in cancer detection and drug discovery, providing a basic understanding of the development and application of MSI in the past five years and offering references for the further application of MSI in cancer detection and drug discovery.

Methods: In the database, "mass spectrometry imaging", "cancer treatment", and "drug discovery" were used as keywords for literature retrieval, and the time range was limited to "2018- 2023". After organizing and analyzing the literature and patents, a review was conducted.

Results: Based on the literature, it was found that the updated progress of MSI in the past five years mostly focused on concrete methods, operation procedures, facilities, and composite applications. The patents of MSI were mainly correlated with the mass spectrometry imaging system and its application in cancer treatment. MSI is conducive to investigating the therapeutic schedule of cancer and searching for new drugs.

Conclusion: MSI is a convenient, fast and powerful technology that has made great progress in sample preparation, instrumentation, quantitation, and multimodal imaging. MSI has emerged as a powerful technique in various biomedical applications, which has strong potential in cancer detection, treatment, formation mechanism research, discovery of biomarkers, and drug discovery process.

背景:质谱成像(MSI)是一种基于质谱技术的成像方法,可以同时观察到各种生物分子的空间分布。近年来,人们对 MSI 在癌症检测和药物发现中的应用进行了广泛研究:本综述旨在总结 MSI 的最新进展及其在癌症检测和药物发现中的具体应用,提供对 MSI 近五年来的发展和应用的基本认识,并为 MSI 在癌症检测和药物发现中的进一步应用提供参考:在数据库中,以 "质谱成像"、"癌症治疗"、"药物发现 "为关键词进行文献检索,时间范围限定为 "2018- 2023"。在对文献和专利进行整理和分析后,进行了综述:根据文献发现,近五年来 MSI 的最新进展多集中在具体方法、操作流程、设施、复合应用等方面。MSI 的专利主要与质谱成像系统及其在癌症治疗中的应用相关。MSI 有利于研究癌症的治疗方案和寻找新药:MSI 是一项方便、快捷、功能强大的技术,在样品制备、仪器、定量和多模态成像方面取得了长足的进步。MSI 在各种生物医学应用中已成为一项强大的技术,在癌症检测、治疗、形成机制研究、生物标记物发现和药物发现过程中具有强大的潜力。
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引用次数: 0
Targeting the Key Signaling Pathways in Breast Cancer: From Molecular Mechanism to Therapeutic Interventions. 针对乳腺癌的关键信号通路:从分子机制到治疗干预。
Pub Date : 2024-01-19 DOI: 10.2174/0115748928267931231120065335
Deepika Singh, Ankit Sahoo

Breast cancer is a public health issue in developing and developed countries. Nowadays, the concept of BCSC (breast cancer stem cell) is gaining popularity among oncology researchers. The breast cancer stem cell is a tiny cell fraction inside the tumor mass that shows features that look like stem cells that are implicated in the genesis, recurrence, and metastasis of breast cancer tumors. Extracellular cues, mutations, and epigenetic control all contribute to the intricacy of gene expression control in Breast cancer stem cells. Thus, signaling pathways identified in breast cancer are Hedgehog and NOTCH, signal transducer and transcription 3, wingless-type MMTV integration site family (Wnt)/-catenin, and nuclear factor-kappa B, particularly connected with a phenotype of stem cell. Furthermore, the tumor microenvironment, such as hypoxic regions, can impact these BCSCs. Various approved signaling pathway targeted molecules have been patented, which show protective effects against breast cancer and have been used in clinical uses. PARP inhibitors are found to be very useful in the treatment of breast cancer. Promoting studies on the molecular pathways underlying the development of cancer in breast cancer patients was one of the main objectives of this study topic. The objective of this review Topic was to discover new intrinsic and extrinsic molecular pathways. Research focusing on novel signaling pathways that may lead to novel treatments or identifying patients at-risk of not responding to standard therapy approaches were the areas of focus we highlighted. The paper covers the linkage between breast cancer stem cells and cellular signaling, the tumor microenvironment in BC, and the relevance of signaling pathways and their therapeutic interventions. The review also covered patent applications associated with these signaling pathways and their prospects.

乳腺癌是发展中国家和发达国家的公共卫生问题。如今,乳腺癌干细胞(BCSC)的概念越来越受到肿瘤研究人员的青睐。乳腺癌干细胞是肿瘤组织内的一种微小细胞,其特征与干细胞相似,与乳腺癌肿瘤的发生、复发和转移有关。细胞外线索、突变和表观遗传控制都是乳腺癌干细胞基因表达控制错综复杂的原因。因此,在乳腺癌中发现的信号通路有Hedgehog和NOTCH、信号转导和转录3、无翅型MMTV整合位点家族(Wnt)/-catenin和核因子-kappa B,尤其与干细胞的表型有关。此外,肿瘤微环境(如缺氧区域)也会对这些碱性细胞干细胞产生影响。各种已获批准的信号通路靶向分子已获得专利,它们对乳腺癌具有保护作用,并已用于临床。PARP 抑制剂在治疗乳腺癌方面非常有用。促进对乳腺癌患者癌症发生的分子途径的研究是本研究课题的主要目标之一。本综述专题的目标是发现新的内在和外在分子通路。我们强调的重点研究领域包括:研究新的信号通路,这些通路可能导致新的治疗方法,或识别对标准治疗方法无效的高危患者。论文涵盖了乳腺癌干细胞与细胞信号传导之间的联系、乳腺癌的肿瘤微环境、信号传导途径及其治疗干预的相关性。综述还涉及与这些信号通路相关的专利申请及其前景。
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引用次数: 0
Protective Assessment of Novel (Bncs Formulation) against Brain Tumor. 新型制剂(Bncs 配方)对脑肿瘤的保护性评估。
Pub Date : 2024-01-12 DOI: 10.2174/0115748928272753231212043701
Anuradha Mishra, Afza Ahmad, Irfan Ahmad Ansari, Rohit Kumar Tiwari

Background: Oxidative stress refers to non-homeostatic elevation within intracellular reactive oxygen species (ROS) levels and is associated with several neuro-related pathological conditions. Diclofenac is a commonly prescribed non-steroidal anti-inflammatory drug (NSAID) for treating aches and pain by reducing inflammation. Diclofenac is also associated with the induction of apoptotic cell death by altering the homeostatic balance within mitochondria. In the present report, the neuroprotective effects of BNC formulation constituted by Bacopa monnieri leaves, Nigella sativa and Curcuma longa rhizome seeds were investigated.

Methods: The synthesized formulation was characterized using FT-IR and LC-MS along with organoleptic evaluation. Thereafter neuroprotective efficacy of BNC formulation was subsequently investigated against Diclofenac-induced oxidative stress in SH-SY5Y cells. The cells were pretreated with synthesized formulation and subsequently evaluated for amelioration in Diclofenac-induced cytotoxicity, and ROS augmentation. The neuroprotective effect of synthesized formulation was further explored by evaluating the changes in nuclear morphology, and apoptosis alleviation with concomitant regulatory effects on caspase-3 and -9 activation.

Results: Diclofenac was found to be considerably cytotoxic against human neuroblastoma SHSY5Y cells. Intriguingly, Diclofenac-mediated toxicity was reduced significantly in SH-SY5Y cells pretreated with BNC formulation. Augmented ROS levels within Diclofenac-treated SHSY5Y cells were also reduced in the BNC formulation pretreated SH-SY5Y cells. Furthermore, BNC formulation pretreated SH-SY5Y cells also exhibited reduced dissipation of mitochondrial membrane potential, caspase-3 and -9, along with apoptosis after Diclofenac treatment.

Conclusion: These findings indicated that, indeed, Diclofenac induces considerable ROSmediated apoptosis in SH-SY5Y cells, which further intriguingly ameliorated Diclofenacmediated cytotoxic effects on SH-SY5Y cells. This manuscript further collected information about available National and International patents published or granted in preparation of and thereof applications against motor and non-motor brain dysfunctions.

背景:氧化应激是指细胞内活性氧(ROS)水平的非稳态升高,与多种神经相关病症有关。双氯芬酸是一种常用的非甾体抗炎药(NSAID),通过减轻炎症来治疗疼痛。双氯芬酸还可通过改变线粒体内的平衡而诱导细胞凋亡。在本报告中,研究了由百服宁叶、黑升麻和莪术根茎种子构成的 BNC 配方对神经的保护作用:方法:采用傅立叶变换红外光谱和液相色谱-质谱法对合成的制剂进行表征,同时进行感官评价。随后研究了 BNC 制剂对 SH-SY5Y 细胞中双氯芬酸诱导的氧化应激的神经保护功效。用合成制剂对细胞进行预处理,然后评估其对双氯芬酸诱导的细胞毒性和 ROS 增强的改善作用。通过评估核形态的变化、细胞凋亡的缓解以及对 caspase-3 和 -9 激活的调节作用,进一步探讨了合成制剂的神经保护作用:结果:发现双氯芬酸对人神经母细胞瘤 SHSY5Y 细胞具有显著的细胞毒性。耐人寻味的是,双氯芬酸介导的毒性在用 BNC 制剂预处理的 SH-SY5Y 细胞中明显降低。在 BNC 制剂预处理的 SH-SY5Y 细胞中,双氯芬酸处理的 SHSY5Y 细胞中增加的 ROS 水平也有所降低。此外,BNC制剂预处理的SH-SY5Y细胞在双氯芬酸处理后,线粒体膜电位、caspase-3和-9的耗散以及细胞凋亡也有所减少:结论:这些研究结果表明,双氯芬酸确实能诱导SH-SY5Y细胞发生大量ROS介导的细胞凋亡,并能进一步改善双氯芬酸对SH-SY5Y细胞的细胞毒性作用。本手稿进一步收集了有关已公布或已授权的国家和国际专利的信息,这些专利正在准备中,并已申请用于治疗大脑运动和非运动功能障碍。
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引用次数: 0
Causal Relationships of Chronic Constipation and Irritable Bowel Syndrome with Digestive Tract Cancers: A Mendelian Randomization Study. 慢性便秘和肠易激综合征与消化道癌症的因果关系:孟德尔随机研究
Pub Date : 2024-01-11 DOI: 10.2174/0115748928283326231229061358
Rencai Fan, Jiaqi Zhang, Jiaofeng Shen, Chenkai Mao, Shicheng Li, Zhixiang Zhuang

Background: Chronic constipation and irritable bowel syndrome (IBS) manifest as prevalent gastrointestinal disorders, while digestive tract cancers (DTCs) present formidable challenges to global well-being. However, extant observational studies proffer uncertain insights into potential causal relationships of constipation and IBS with susceptibility to DTCs.

Methods: We executed Mendelian randomization (MR) analysis to establish causal connections between these conditions and seven distinct categories of DTCs, including colorectal carcinoma (CRC), hepatocellular cancer (HCC), esophageal malignancy (ESCA), pancreatic adenocarcinoma (PAAD), biliary tract carcinoma (BTCs), gastric carcinoma (GC), and small intestine neoplasm (SIC). Leveraging instrumental variables (IVs) obtained from GWAS data of the FinnGen database, we employed a range of analytical methodologies, including inverse-variance weighting multiplicative random effects (IVW_MRE), inverse-variance weighting fixed effects (IVW_FE), maximum likelihood (ML), weighted median (WM), MR‒Egger regression, and the MR-PRESSO test.

Results: We observed a substantial linkage between genetically predicted constipation and increased vulnerability to PAAD (OR = 2.29, 95% CI: 1.422-3.69, P = 0.001) via the IVW method. Following the removal of outlier SNPs through MR-PRESSO, genetically predicted IBS was affiliated with an increased risk of CRC (OR = 1.17, 95% CI: 1-1.37, P = 0.05). Nonetheless, decisive causal correlations of constipation or IBS with other DTCs remain elusive.

Conclusion: In summary, genetically predicted constipation was associated with an augmented PAAD risk, and IBS was associated with an increased CRC susceptibility within European cohorts, in agreement with some observational studies. Nevertheless, the causal associations of constipation and IBS with other DTCs remain inconclusive.

背景:慢性便秘和肠易激综合征(IBS)是普遍存在的胃肠道疾病,而消化道癌症(DTC)则是全球福祉面临的严峻挑战。然而,现有的观察性研究对便秘和肠易激综合征与 DTCs 易感性的潜在因果关系提供了不确定的见解:我们进行了孟德尔随机化(MR)分析,以确定这些症状与七类不同的 DTCs 之间的因果关系,包括结直肠癌(CRC)、肝细胞癌(HCC)、食管恶性肿瘤(ESCA)、胰腺腺癌(PAAD)、胆道癌(BTCs)、胃癌(GC)和小肠肿瘤(SIC)。利用从 FinnGen 数据库的 GWAS 数据中获得的工具变量(IVs),我们采用了一系列分析方法,包括逆方差加权乘法随机效应(IVW_MRE)、逆方差加权固定效应(IVW_FE)、最大似然法(ML)、加权中位数(WM)、MR-Egger 回归和 MR-PRESSO 检验:通过 IVW 方法,我们观察到遗传预测便秘与 PAAD 易感性增加之间存在实质性联系(OR = 2.29,95% CI:1.422-3.69,P = 0.001)。通过 MR-PRESSO 去除离群 SNP 后,遗传预测的肠易激综合征与 CRC 风险增加有关(OR = 1.17,95% CI:1-1.37,P = 0.05)。尽管如此,便秘或肠易激综合征与其他 DTCs 的决定性因果关系仍然难以捉摸:总之,在欧洲队列中,遗传学预测的便秘与 PAAD 风险增加有关,而肠易激综合征与 CRC 易感性增加有关,这与一些观察性研究一致。然而,便秘和肠易激综合征与其他 DTCs 的因果关系仍未确定。
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引用次数: 0
Identification of Breast Cancer Immune-related Prognostic Characteristics in Tumor Microenvironment. 识别乳腺癌肿瘤微环境中与免疫相关的预后特征
Pub Date : 2024-01-10 DOI: 10.2174/0115748928258157231128103337
Zhenning Tang, Ling Li, Xiaoying Huang, Yinbing Zhao, Qingyuan Liu, Chaolin Zhang

Background: Accumulated evidence suggest that tumor microenvironment (TME) plays a crucial role in breast cancer (BRCA) progression and therapeutic effects.

Objective: This study aimed to characterize immune-related BRCA subtypes in TME, and identify genes with prognostic value.

Methods: RNA sequencing profiles with corresponding clinical data from The Cancer Genome Atlas (TCGA) database of BRCA patients were downloaded to evaluate immune infiltration using the single-sample gene set enrichment (ssGAEA) algorithm. Further, BRCA was clustered according to immune infiltration status by consensus clustering analysis. Using Venn analysis, differentially expressed genes (DEGs) were overlapped to obtain candidate genes. Kaplan-Meier (K-M) analysis was performed to identify prognostic genes, and the results were verified in the GEO and METABRIC datasets. RT-qPCR was conducted to detect the mRNA expression of prognostic genes.

Results: In the TCGA database, 3 immune-related BRCA subtypes were identified [cluster1 (C1), cluster2 (C2), and cluster3 (C2)]. The C2 subtype had better overall survival (OS) compared to the C1 subtype. Higher levels of immune markers and checkpoint protein were found in the C2 subtype than in others. By combining DEGs between BRCA and normal tissues, with the C1 and C2 subtypes associated with different OS, 25 BRCA candidate genes were identified. Among these, 8 genes were identified as prognostic genes for BRCA. RT-qPCR showed that the expressions of 2 genes were significantly elevated in BRCA tissues, while that of other genes were decreased.

Conclusion: Three BRCA subtypes were identified with the immune index, which may help design advanced treatment of BRCA. The data code used for the analysis in this article was available on GitHub (https://github.com/tangzhn/BRCA1.git).

背景:累积的证据表明,肿瘤微环境(TME)在乳腺癌(BRCA)的进展和治疗效果中起着至关重要的作用:本研究旨在描述肿瘤微环境中与免疫相关的 BRCA 亚型,并鉴定具有预后价值的基因:方法:从癌症基因组图谱(TCGA)数据库下载BRCA患者的RNA测序图谱和相应的临床数据,利用单样本基因组富集(ssGAEA)算法评估免疫浸润。然后,通过共识聚类分析根据免疫浸润状态对 BRCA 进行聚类。利用维恩分析法,将差异表达基因(DEGs)重叠,以获得候选基因。通过 Kaplan-Meier (K-M) 分析来确定预后基因,并在 GEO 和 METABRIC 数据集中对结果进行了验证。RT-qPCR用于检测预后基因的mRNA表达:结果:在TCGA数据库中,发现了3种与免疫相关的BRCA亚型[cluster1(C1)、cluster2(C2)和cluster3(C2)]。与C1亚型相比,C2亚型的总生存率(OS)更高。与其他亚型相比,C2亚型的免疫标记物和检查点蛋白水平更高。通过结合 BRCA 和正常组织的 DEGs,以及与不同 OS 相关的 C1 和 C2 亚型,确定了 25 个 BRCA 候选基因。其中,8 个基因被确定为 BRCA 的预后基因。RT-qPCR显示,2个基因在BRCA组织中的表达量明显升高,而其他基因的表达量则有所下降:结论:利用免疫指数确定了三种 BRCA 亚型,这可能有助于设计 BRCA 的先进治疗方法。本文分析所用的数据代码可在 GitHub (https://github.com/tangzhn/BRCA1.git) 上获取。
{"title":"Identification of Breast Cancer Immune-related Prognostic Characteristics in Tumor Microenvironment.","authors":"Zhenning Tang, Ling Li, Xiaoying Huang, Yinbing Zhao, Qingyuan Liu, Chaolin Zhang","doi":"10.2174/0115748928258157231128103337","DOIUrl":"https://doi.org/10.2174/0115748928258157231128103337","url":null,"abstract":"<p><strong>Background: </strong>Accumulated evidence suggest that tumor microenvironment (TME) plays a crucial role in breast cancer (BRCA) progression and therapeutic effects.</p><p><strong>Objective: </strong>This study aimed to characterize immune-related BRCA subtypes in TME, and identify genes with prognostic value.</p><p><strong>Methods: </strong>RNA sequencing profiles with corresponding clinical data from The Cancer Genome Atlas (TCGA) database of BRCA patients were downloaded to evaluate immune infiltration using the single-sample gene set enrichment (ssGAEA) algorithm. Further, BRCA was clustered according to immune infiltration status by consensus clustering analysis. Using Venn analysis, differentially expressed genes (DEGs) were overlapped to obtain candidate genes. Kaplan-Meier (K-M) analysis was performed to identify prognostic genes, and the results were verified in the GEO and METABRIC datasets. RT-qPCR was conducted to detect the mRNA expression of prognostic genes.</p><p><strong>Results: </strong>In the TCGA database, 3 immune-related BRCA subtypes were identified [cluster1 (C1), cluster2 (C2), and cluster3 (C2)]. The C2 subtype had better overall survival (OS) compared to the C1 subtype. Higher levels of immune markers and checkpoint protein were found in the C2 subtype than in others. By combining DEGs between BRCA and normal tissues, with the C1 and C2 subtypes associated with different OS, 25 BRCA candidate genes were identified. Among these, 8 genes were identified as prognostic genes for BRCA. RT-qPCR showed that the expressions of 2 genes were significantly elevated in BRCA tissues, while that of other genes were decreased.</p><p><strong>Conclusion: </strong>Three BRCA subtypes were identified with the immune index, which may help design advanced treatment of BRCA. The data code used for the analysis in this article was available on GitHub (https://github.com/tangzhn/BRCA1.git).</p>","PeriodicalId":94186,"journal":{"name":"Recent patents on anti-cancer drug discovery","volume":" ","pages":""},"PeriodicalIF":0.0,"publicationDate":"2024-01-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139428126","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Differentiation of Acute Leukemia Cells Including Cells with MLL-AF4 Rearrangements Induced by Jiyuan Oridonin A. 济源奥利多宁 A 诱导急性白血病细胞(包括 MLL-AF4 重排细胞)分化
Pub Date : 2024-01-09 DOI: 10.2174/0115748928263141231204112640
Xueming Li, Fenglian Zhang, Yu Ke, Hongmin Liu, Zhenbo Hu, Liuya Wei

Background: Chromosomal rearrangements involving the Mixed lineage leukemia (MLL) gene are observed in acute leukemia (AL) patients, which have poor prognosis, especially in infants. Hence, there is still a challenge to develop other effective agents to treat AL with MLL rearrangements (MLLr). MLL has been shown to rearrange with partner genes, of which the most frequently observed are AF4 and AF9. Moreover, AL is characterized by a differentiation blockage resulting in the accumulation of immature cells. An ent-kaurene diterpenoid compound, Jiyuan Oridonin A (JOA), has been shown to reduce the viability of AML cells by differentiation.

Methods: We aimed to evaluate the effect of JOA on the growth and differentiation of AL cells (SEM, JURKAT and MV4-11) including cells with MLLr-AF4 by cell proliferation assay, colony formation assay, cell cycle analysis, cell apoptosis analysis, measurement of cell surface antigens, cell morphology, mRNA-sequencing analysis, quantitative Real-time PCR and Western blotting analysis.

Results: Our findings demonstrated that the proliferation of AL cells including cells with MLLr-AF4 was significantly suppressed by JOA, which induced cell differentiation followed by G0/G1 cell cycle withdrawal. Moreover, JOA-mediated cell differentiation was likely due to activation of G-CSFR in MV4-11 cells.

Conclusion: Our results suggest that JOA may be considered a promising anti-leukemia compound to develop to surmount the differentiation block in AL patients.

背景:急性白血病(AL)患者的预后较差,尤其是婴儿。因此,开发其他有效药物来治疗伴有 MLL 基因重排的急性白血病(MLLr)仍是一项挑战。已证实 MLL 可与伙伴基因重排,其中最常见的是 AF4 和 AF9。此外,AL 的特点是分化受阻,导致未成熟细胞堆积。一种名为济源桔梗素 A(JOA)的ent-kaurene 二萜化合物已被证明能通过分化降低 AML 细胞的活力:我们旨在通过细胞增殖试验、集落形成试验、细胞周期分析、细胞凋亡分析、细胞表面抗原测量、细胞形态学、mRNA 序列分析、定量实时 PCR 和 Western 印迹分析,评估 JOA 对 AL 细胞(SEM、JURKAT 和 MV4-11)(包括 MLLr-AF4 细胞)生长和分化的影响:结果:我们的研究结果表明,JOA 能显著抑制 AL 细胞(包括 MLLr-AF4 细胞)的增殖,并诱导细胞分化和 G0/G1 细胞周期的退出。此外,JOA 介导的细胞分化可能是由于 MV4-11 细胞中的 G-CSFR 被激活所致:我们的研究结果表明,JOA可能是一种有前途的抗白血病化合物,可用于开发以克服AL患者的分化障碍。
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引用次数: 0
TENT5A Increases Glioma Malignancy and Promotes its Progression. TENT5A 增加胶质瘤的恶性程度并促进其进展
Pub Date : 2024-01-09 DOI: 10.2174/0115748928280901231206102637
Jiali Hu, Lei Zeng, Ronghuan Hu, Dan Gong, Mengmeng Liu, Jianwu Ding

Background: Recent studies reported that terminal nucleotidyltransferase 5A (TENT5A) is highly expressed in glioblastoma and associated with poor prognosis. In this work, we aim to specify the expression level of TENT5A in different grades of glioma and explore its role in glioma progression.

Methods: GEPIA online tools were used to perform the bioinformatic analysis. qRT-PCR, Western blot, and Immunohistochemistry were performed in glioma cells or tissues. Furthermore, CCK8, colony formation, transwell, flow cytometry and scratch assays were performed.

Results: TENT5A was highly expressed in glioma and its level was associated with the pathological grade of glioma. Knockdown of TENT5A suppressed cell proliferation, colony formation ability, cell invasion and migration. Overexpression of TENT5A was lethal to the glioma cells.

Conclusion: Our data showed that the expression of TENT5A is associated with the pathological grade of glioma. Knockdown of TENT5A decreased the ability of proliferation, invasion and migration of glioma cells. High levels of TENT5A in glioma cells are lethal. Therefore, TENT5A could be a new target for glioma treatment.

背景:最近有研究报道,末端核苷酸转移酶5A(TENT5A)在胶质母细胞瘤中高表达,并与不良预后相关。本研究旨在明确 TENT5A 在不同级别胶质瘤中的表达水平,并探讨其在胶质瘤进展中的作用:方法:使用 GEPIA 在线工具进行生物信息学分析,对胶质瘤细胞或组织进行 qRT-PCR、Western 印迹和免疫组化。此外,还进行了 CCK8、集落形成、transwell、流式细胞术和划痕试验:结果:TENT5A在胶质瘤中高表达,其水平与胶质瘤的病理分级有关。敲除 TENT5A 可抑制细胞增殖、集落形成能力、细胞侵袭和迁移。结论:我们的数据表明,TENT5A的表达与胶质瘤的病理分级有关。敲除 TENT5A 能降低胶质瘤细胞的增殖、侵袭和迁移能力。胶质瘤细胞中高水平的 TENT5A 具有致死性。因此,TENT5A可能是治疗胶质瘤的新靶点。
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引用次数: 0
Comprehensive Bioinformatic Analysis Reveals an Autophagy-related Gene Signature for Predicting Outcome, Immune Status, and Drug Sensitivity in Hepatocellular Carcinoma. 综合生物信息学分析揭示自噬相关基因特征,可预测肝细胞癌的预后、免疫状态和药物敏感性
Pub Date : 2024-01-09 DOI: 10.2174/0115748928275025231213103658
Peng Liu, Yan Zhou, Shun Zeng, Xiangjuan Chen

Background: Hepatocellular carcinoma (HCC) is one of the most common malignancies in the world, but molecular complexity and tumor heterogeneity make predictive models for HCC prognosis ineffective. Many recent studies have suggested that autophagy is important in tumor progression. Using autophagy-related genes (ARGs), we attempted to create a novel signature for individual prognosis prediction in patients with HCC.

Methods: Differentially expressed ARGs (DE-ARGs) in HCC and normal samples were screened using TCGA datasets. Univariate Cox and multivariate Cox regression analyses were performed to determine ARGs related to survival in HCC. An autophagy-based signature was constructed using LASSO, and its correlation with the prognosis and the immune infiltration of HCC patients was explored.

Results: In this study, we screened 32 survival-related DE-ARGs by analyzing TCGA datasets. Functional enrichment indicated that the 32 DE-ARGs may play important functional and regulatory roles in cellular autophagy, the regulation of multiple signaling pathways, as well as in the context of cancer and neurological diseases. Based on PPI Network, we identified several hub genes. LASSO Cox regression analysis selected five genes (CASP8, FOXO1, PRKCD, SPHK1, and SQSTM1) for a novel prognostic model. AUCs of 0.752, 0.686, and 0.665 in the TCGA whole set indicated that the model accurately predicted 1-, 3-, and 5-year overall survival, respectively. Cox regression analysis showed that the five-gene signature is an independent and robust predictor in patients with HCC. The high-risk group demonstrated higher levels of immune cell infiltration and exhibited a strong correlation with the immune microenvironment and tumor stem cells. In addition, we further identified PRKCD and SQSTM1 as critical regulators involved in HCC progression. The expression levels of PRKCD and SQSTM1 genes play a crucial role in chemotherapy drug sensitivity and resistance.

Conclusion: We introduce here a novel ARG-based predictive feature for HCC patients. Effective use of this signature will aid in determining a patient's prognosis and may lead to novel approaches to clinical decision-making and therapy.

背景:肝细胞癌(HCC)是世界上最常见的恶性肿瘤之一:肝细胞癌(HCC)是世界上最常见的恶性肿瘤之一,但分子的复杂性和肿瘤的异质性使得HCC预后预测模型失效。最近的许多研究表明,自噬在肿瘤进展中起着重要作用。我们试图利用自噬相关基因(ARGs)创建一种新的特征,用于预测HCC患者的个体预后:方法:我们使用 TCGA 数据集筛选了 HCC 和正常样本中差异表达的 ARGs(DE-ARGs)。进行了单变量Cox和多变量Cox回归分析,以确定与HCC患者生存相关的ARGs。利用LASSO构建了基于自噬的特征,并探讨了其与HCC患者预后和免疫浸润的相关性:本研究通过分析TCGA数据集筛选出了32个与生存相关的DE-ARGs。功能富集表明,这32个DE-ARGs可能在细胞自噬、多种信号通路调控以及癌症和神经系统疾病中发挥重要的功能和调控作用。基于 PPI 网络,我们发现了几个枢纽基因。LASSO Cox回归分析选择了五个基因(CASP8、FOXO1、PRKCD、SPHK1和SQSTM1)作为新的预后模型。TCGA全集的AUC分别为0.752、0.686和0.665,表明该模型能准确预测1年、3年和5年的总生存率。Cox 回归分析表明,五基因特征是预测 HCC 患者的一个独立且稳健的指标。高危组有更高水平的免疫细胞浸润,并与免疫微环境和肿瘤干细胞密切相关。此外,我们还进一步发现 PRKCD 和 SQSTM1 是参与 HCC 进展的关键调控因子。PRKCD和SQSTM1基因的表达水平在化疗药物敏感性和耐药性中起着至关重要的作用:我们在此介绍一种基于 ARG 的新型 HCC 患者预测特征。结论:我们在此介绍了一种基于 ARG 的新型 HCC 患者预测特征,有效利用该特征将有助于确定患者的预后,并为临床决策和治疗提供新方法。
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引用次数: 0
Increased SLC7A3 Expression inhibits Tumor Cell Proliferation and Predicts a Favorable Prognosis in Breast Cancer. 增加 SLC7A3 表达可抑制肿瘤细胞增殖并预示乳腺癌的良好预后
Pub Date : 2024-01-08 DOI: 10.2174/0115748928279007231130070056
Lifang He, Yue Xu, Jiediao Lin, Stanley Lin, Yukun Cui

Background: Arginine plays significant and contrasting roles in breast cancer growth and survival. However, the factors governing arginine balance remain poorly characterized.

Objective: We aimed to identify the molecule that governs arginine metabolism in breast cancer and to elucidate its significance.

Methods: We analyzed the correlation between the expression of solute carrier family 7 member 3 (SLC7A3), the major arginine transporter, and breast cancer survival in various databases, including GEPIA, UALCAN, Metascape, String, Oncomine, KM-plotter, CBioPortal and Prognosis. Additionally, we validated our findings through bioinformatic analyses and experimental investigations, including colony formation, wound healing, transwell, and mammosphere formation assays.

Results: Our analysis revealed a significant reduction in SLC7A3 expression in all breast cancer subtypes compared to adjacent breast tissues. Kaplan-Meier survival analyses demonstrated that high SLC7A3 expression was positively associated with decreased nodal metastasis (HR=0.70, 95% CI [0.55, 0.89]), ER positivity (HR=0.79, 95% CI [0.65, 0.95]), and HER2 negativity (HR=0.69, 95% CI [0.58, 0.82]), and increased recurrence-free survival. Moreover, low SLC7A3 expression predicted poor prognosis in breast cancer patients for overall survival. Additionally, the knockdown of SLC7A3 in MCF-7 and MDA-MB-231 cells resulted in increased cell proliferation and invasion in vitro.

Conclusion: Our findings indicate a downregulation of SLC7A3 expression in breast cancer tissues compared to adjacent breast tissues. High SLC7A3 expression could serve as a prognostic indicator for favorable outcomes in breast cancer patients due to its inhibitory effects on breast cancer cell proliferation and invasion.

背景:精氨酸在乳腺癌的生长和存活过程中扮演着重要且截然不同的角色。然而,影响精氨酸平衡的因素仍鲜为人知:我们旨在确定乳腺癌中精氨酸代谢的调控分子,并阐明其重要性:我们在各种数据库(包括 GEPIA、UALCAN、Metascape、String、Oncomine、KM-plotter、CBioPortal 和 Prognosis)中分析了主要精氨酸转运体溶质载体家族 7 成员 3(SLC7A3)的表达与乳腺癌生存之间的相关性。此外,我们还通过生物信息学分析和实验研究验证了我们的发现,包括菌落形成、伤口愈合、经孔和乳球形成试验:结果:我们的分析表明,与邻近乳腺组织相比,所有亚型乳腺癌的 SLC7A3 表达量都明显减少。Kaplan-Meier生存分析表明,SLC7A3高表达与结节转移减少(HR=0.70,95% CI [0.55,0.89])、ER阳性(HR=0.79,95% CI [0.65,0.95])和HER2阴性(HR=0.69,95% CI [0.58,0.82])以及无复发生存期延长呈正相关。此外,SLC7A3的低表达预示着乳腺癌患者总生存期的不良预后。此外,体外敲除 MCF-7 和 MDA-MB-231 细胞中的 SLC7A3 会导致细胞增殖和侵袭增加:结论:我们的研究结果表明,与邻近的乳腺组织相比,乳腺癌组织中 SLC7A3 的表达下调。结论:我们的研究结果表明,与邻近乳腺组织相比,SLC7A3 在乳腺癌组织中的表达下调,由于其对乳腺癌细胞增殖和侵袭的抑制作用,SLC7A3 的高表达可作为乳腺癌患者预后良好的指标。
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引用次数: 0
Curcumin Inhibits the Growth of Hepatocellular Carcinoma via the MARCH1-mediated Modulation of JAK2/STAT3 Signaling. 姜黄素通过 MARCH1 介导的 JAK2/STAT3 信号调节抑制肝细胞癌的生长
Pub Date : 2024-01-08 DOI: 10.2174/0115748928261490231124055059
Jiaqi Su, Xianbing Liu, Xiaoyue Zhao, Hongjie Ma, Yuzhu Jiang, Xu Wang, Peiyuan Wang, Mingdong Zhao, Xuemei Hu

Background: Curcumin has been reported to have anti-hepatocellular carcinoma (HCC) effects, but the underlying mechanism is not well known.

Objectives: To investigate whether membrane-associated RING-CH 1 (MARCH1) is involved in the curcumin-induced growth suppression in HCC and its underlying molecular mechanism. A few recent patents for curcumin for cancer are also reviewed in this article.

Methods: The effect of curcumin on growth inhibition of HCC cells was analyzed through in vitro and in vivo experiments, and the expression levels of MARCH1, Bcl-2, VEGF, cyclin B1, cyclin D1, and JAK2/STAT3 signaling molecules were measured in HCC cells and the xenograft tumors in nude mice. Cell transfection with MARCH1 siRNAs or expression plasmid was used to explore the role of MARCH1 in the curcumin-induced growth inhibition of HCC cells.

Results: Curcumin inhibited cell proliferation, promoted apoptosis, and arrested the cell cycle at the G2/M phase in HCC cells with the decrease of Bcl-2, VEGF, cyclin B1, and cyclin D1 expression as well as JAK2 and STAT3 phosphorylation, resulting in the growth suppression of HCC cells. MARCH1 is highly expressed in HCC cells, and its expression was downregulated after curcumin treatment in a dose-dependent manner. The knockdown of MARCH1 by siRNA decreased the phosphorylation levels of JAK2 and STAT3 and inhibited the growth of HCC cells. In contrast, opposite results were observed when HCC cells overexpressed MARCH1. A xenograft tumor model in nude mice also showed that curcumin downregulated MARCH1 expression and decelerated the growth of transplanted HCC with the downregulation of JAK2/STAT3 signaling and functional molecules. The ADC value of MRI analysis showed that curcumin slowed down the progression of HCC.

Conclusion: Our results demonstrated that curcumin may inhibit the activation of JAK2/STAT3 signaling pathway by downregulating MARCH1 expression, resulting in the growth suppression of HCC. MARCH1 may be a novel target of curcumin in HCC treatment.

背景:姜黄素被报道具有抗肝细胞癌(HCC)的作用,但其潜在机制尚不清楚:研究膜相关 RING-CH 1 (MARCH1) 是否参与姜黄素诱导的 HCC 生长抑制及其分子机制。本文还对姜黄素治疗癌症的几项最新专利进行了综述:方法:通过体外和体内实验分析姜黄素对 HCC 细胞生长抑制的作用,并测定 MARCH1、Bcl-2、VEGF、细胞周期蛋白 B1、细胞周期蛋白 D1 和 JAK2/STAT3 信号分子在 HCC 细胞和裸鼠异种移植瘤中的表达水平。用MARCH1 siRNAs或表达质粒转染细胞,探讨MARCH1在姜黄素诱导的HCC细胞生长抑制中的作用:结果:姜黄素抑制了HCC细胞的增殖,促进了细胞凋亡,并使细胞周期停滞在G2/M期,同时降低了Bcl-2、VEGF、细胞周期蛋白B1和细胞周期蛋白D1的表达以及JAK2和STAT3的磷酸化,从而抑制了HCC细胞的生长。MARCH1 在 HCC 细胞中高表达,姜黄素处理后其表达呈剂量依赖性下调。通过 siRNA 敲除 MARCH1 可降低 JAK2 和 STAT3 的磷酸化水平,抑制 HCC 细胞的生长。相反,当HCC细胞过表达MARCH1时,则观察到相反的结果。裸鼠异种移植肿瘤模型也表明,姜黄素能下调 MARCH1 的表达,并通过下调 JAK2/STAT3 信号转导和功能分子来减缓移植 HCC 的生长。MRI的ADC值分析表明,姜黄素减缓了HCC的进展:我们的研究结果表明,姜黄素可以通过下调MARCH1的表达来抑制JAK2/STAT3信号通路的激活,从而抑制HCC的生长。MARCH1可能是姜黄素治疗HCC的一个新靶点。
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引用次数: 0
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Recent patents on anti-cancer drug discovery
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