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Th1 cells inducing IFNγ response improves immunotherapy efficacy in gastric cancer. Th1细胞诱导IFNγ应答提高胃癌免疫治疗疗效。
Pub Date : 2023-06-30 DOI: 10.21147/j.issn.1000-9604.2023.03.08
Qi Cao, Ruidong Xue, Ning Zhang

Objective: Cancer immunotherapy has made remarkable advances in recent years, but its effectiveness in treating gastric cancer is often limited by the complexity of the tumor microenvironment and the lack of effective biomarkers. This study aimed to identify effective biomarkers for immunotherapy treatment by characterizing the tumor microenvironment.

Methods: We retrieved the RNA-seq data from gastric cancer patients treated with the programmed death 1 (PD-1) blockade pembrolizumab. Differentially expressed genes associated with clinical outcomes were identified and further analyzed using gene ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analysis. Gene signature scores were calculated by single sample Gene Set Enrichment Analysis (ssGSEA). The infiltration levels of immune cells were quantified using the xCell website. Cell type enrichment analysis was performed to compare treatment response and non-response groups, and regression analysis was used to investigate the relationship between interferon gamma (IFNγ) immune response and immune cell infiltration. Biomarkers were identified using least absolute shrinkage and selection operator (LASSO) analysis.

Results: Compared to normal tissues, cytokine activity and interleukin-6 production were highly activated in gastric tumors. Responders to pembrolizumab showed significantly up-regulated expression of IFNγ response-related genes. Cell type enrichment analysis revealed that Th1 cells were significantly enriched in the tumor microenvironment of responders. Regression analysis indicated that Th1 cells induced IFNγ response more efficiently than other cell types. Using signatures of Th1 cells, stromal cells and IFNγ response, a set of eight genes were identified that effectively predicted the efficacy of immunotherapy treatment and patient prognosis.

Conclusions: Th1 cells promote therapeutic efficacy of PD-1 blockade by promoting IFNγ immune response in gastric cancer. The identified biomarkers have the potential to improve the effectiveness of immunotherapy treatment for gastric cancer patients.

目的:肿瘤免疫治疗近年来取得了显著进展,但由于肿瘤微环境的复杂性和缺乏有效的生物标志物,其治疗胃癌的有效性往往受到限制。本研究旨在通过表征肿瘤微环境来确定免疫治疗的有效生物标志物。方法:我们检索了接受pembrolizumab治疗的程序性死亡1 (PD-1)阻滞剂胃癌患者的RNA-seq数据。通过基因本体(GO)和京都基因与基因组百科全书(KEGG)通路分析,鉴定并进一步分析与临床结果相关的差异表达基因。通过单样本基因集富集分析(ssGSEA)计算基因签名评分。利用xCell网站定量免疫细胞浸润水平。采用细胞类型富集分析比较治疗反应组和无反应组,并采用回归分析探讨干扰素γ (IFNγ)免疫反应与免疫细胞浸润的关系。使用最小绝对收缩和选择算子(LASSO)分析确定生物标志物。结果:与正常组织相比,胃肿瘤细胞因子活性和白细胞介素-6的产生高度激活。派姆单抗应答者显示IFNγ应答相关基因的表达显著上调。细胞类型富集分析显示,应答者的肿瘤微环境中Th1细胞显著富集。回归分析表明,Th1细胞诱导IFNγ反应的效率高于其他细胞类型。利用Th1细胞、基质细胞和IFNγ反应的特征,确定了一组8个基因,可以有效预测免疫治疗的疗效和患者预后。结论:Th1细胞通过促进IFNγ免疫应答,促进PD-1阻断在胃癌中的治疗效果。所鉴定的生物标志物具有提高胃癌患者免疫治疗有效性的潜力。
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引用次数: 0
Immune evasion and therapeutic opportunities based on natural killer cells. 基于自然杀伤细胞的免疫逃避和治疗机会。
Pub Date : 2023-06-30 DOI: 10.21147/j.issn.1000-9604.2023.03.07
Jinjin Zhang, Feifei Guo, Lingyu Li, Songling Zhang, Yufeng Wang

Natural killer (NK) cells can elicit an immune response against malignantly transformed cells without recognizing antigens, and they also exhibit cytotoxic effects and immune surveillance functions in tumor immunotherapy. Although several studies have shown the promising antitumor effects of NK cells in immunotherapy, their function is often limited in the tumor microenvironment because tumor cells can easily escape NK cell-induced death. Thus, for efficient tumor immunotherapy, the mechanism by which tumor cells escape NK cell-induced cytotoxicity must be fully understood. Various novel molecules and checkpoint receptors that mediate the disruption of NK cells in the tumor microenvironment have been discovered. In this review, we analyze and detail the major activating and inhibitory receptors on the surface of NK cells to delineate the mechanism by which tumor cells suppress NKG2D ligand expression and increase tumor receptor and inhibitory receptor expression [NKG2A, programmed cell death 1 (PD-1), and T-cell immunoglobulin and immunoreceptor tyrosine inhibitory motif (TIGIT)] on the NK cell surface, and thus inhibit NK cell activity. We also reviewed the current status of treatments based on these surface molecules. By comparing the therapeutic effects related to the treatment status and bypass mechanisms, we attempt to identify optimal single or combined treatments to suggest new treatment strategies for tumor immunotherapy.

自然杀伤(NK)细胞在不识别抗原的情况下,可以引起对恶性转化细胞的免疫应答,并且在肿瘤免疫治疗中也表现出细胞毒作用和免疫监视功能。虽然一些研究表明NK细胞在免疫治疗中具有很好的抗肿瘤作用,但由于肿瘤细胞很容易逃避NK细胞诱导的死亡,其功能在肿瘤微环境中往往受到限制。因此,为了有效的肿瘤免疫治疗,必须充分了解肿瘤细胞逃避NK细胞诱导的细胞毒性的机制。各种新的分子和检查点受体介导NK细胞在肿瘤微环境的破坏已经被发现。本文通过对NK细胞表面主要激活和抑制受体的分析和详细描述,揭示肿瘤细胞抑制NKG2D配体表达,增加NK细胞表面肿瘤受体和抑制受体表达[NKG2A、程序性细胞死亡1 (PD-1)、t细胞免疫球蛋白和免疫受体酪氨酸抑制基序(TIGIT)],从而抑制NK细胞活性的机制。我们还综述了基于这些表面分子的处理方法的现状。通过比较与治疗状态和旁路机制相关的治疗效果,我们试图确定最佳的单一或联合治疗方法,为肿瘤免疫治疗提供新的治疗策略。
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引用次数: 0
Effect of microbiome group on immune checkpoint inhibitors in treatment of gastrointestinal tumors. 微生物组对免疫检查点抑制剂治疗胃肠道肿瘤的影响。
Pub Date : 2023-06-30 DOI: 10.21147/j.issn.1000-9604.2023.03.05
Beibei Pei, Xiaoyan Ma, Na Wu, Chen Wang, Wenhui Yang

In recent years, immune checkpoint blockade (ICB) therapy has become an important treatment strategy for gastrointestinal tumors, however, it only benefits about 1/3 of patients. Since the microbiome has been shown to play an important role in the human body for a long time, a growing number of studies are focusing on its relationship to ICB therapy in cancer, specifically how intestinal microbes affect the efficacy of immune checkpoint inhibitors (ICIs) therapy in patients. On this basis, probiotic interventions, fecal microbiota transplantation (FMT), dietary interventions, and other methods which improve or maintain the structure of the intestinal flora have attracted widespread attention. This article discusses the four aspects of the microbiome, ICB, combined treatment of gastrointestinal tumors, and regulation of gut microbiome. Particularly, the discussion focuses on the contribution of probiotic intervention in improving the therapeutic effect of ICIs to prolong the survival time of patients and reduce the severity of immune-related adverse effects (irAEs).

近年来,免疫检查点阻断(immune checkpoint blockade, ICB)疗法已成为胃肠道肿瘤的重要治疗策略,但仅使约1/3的患者受益。长期以来,微生物组已被证明在人体中发挥重要作用,越来越多的研究将重点放在其与癌症中ICB治疗的关系上,特别是肠道微生物如何影响患者免疫检查点抑制剂(ICIs)治疗的疗效。在此基础上,益生菌干预、粪便菌群移植(FMT)、饮食干预等改善或维持肠道菌群结构的方法受到了广泛关注。本文从微生物组、ICB、胃肠道肿瘤联合治疗和肠道微生物组调控四个方面进行了探讨。重点讨论了益生菌干预在改善ICIs治疗效果、延长患者生存时间和降低免疫相关不良反应(irAEs)严重程度方面的贡献。
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引用次数: 0
Challenges and interventions of chimeric antigen receptor-T cell therapy in solid tumors. 嵌合抗原受体- t细胞治疗实体瘤的挑战和干预措施。
Pub Date : 2023-06-30 DOI: 10.21147/j.issn.1000-9604.2023.03.03
Shasha Liu, Yi Zhang

Adoptive cellular therapy is rapidly improving immunotherapy in hematologic malignancies and several solid tumors. Remarkable clinical success has been achieved in chimeric antigen receptor (CAR)-T cell therapy which represents a paradigm-shifting strategy for the treatment of hematological malignancies. However, many challenges such as resistance, antigen heterogeneity, poor immune cell infiltration, immunosuppressive microenvironment, metabolic obstructive microenvironment, and T cell exhaustion remain as barriers to broader application especially in solid tumors. Encouragingly, the development of new approaches such as multidimensional omics and biomaterials technologies was aided to overcome these barriers. Here, in this perspective, we focus on the most recent clinical advancements, challenges, and strategies of immune cellular therapy in solid tumor treatment represented by CAR-T cell therapy, to provide new ideas to further overcome the bottleneck of immune cell therapy and anticipate future clinical advances.

过继细胞疗法正在迅速改善血液恶性肿瘤和几种实体瘤的免疫治疗。嵌合抗原受体(CAR)-T细胞治疗取得了显著的临床成功,它代表了血液系统恶性肿瘤治疗的范式转变策略。然而,许多挑战,如耐药性、抗原异质性、免疫细胞浸润不良、免疫抑制微环境、代谢阻塞性微环境和T细胞耗竭等,仍然是广泛应用的障碍,特别是在实体肿瘤中。令人鼓舞的是,多维组学和生物材料技术等新方法的发展有助于克服这些障碍。本文从这一角度出发,聚焦以CAR-T细胞治疗为代表的免疫细胞治疗在实体瘤治疗中的最新临床进展、挑战和策略,为进一步突破免疫细胞治疗的瓶颈提供新的思路,并对未来的临床进展进行预测。
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引用次数: 0
Predictive value of co-expression patterns of immune checkpoint molecules for clinical outcomes of hematological malignancies. 免疫检查点分子共表达模式对血液系统恶性肿瘤临床预后的预测价值。
Pub Date : 2023-06-30 DOI: 10.21147/j.issn.1000-9604.2023.03.04
Cunte Chen, Yangqiu Li

Co-expression of immune checkpoint (IC) molecules can exacerbate T cell exhaustion in patients with hematological malignancies (HMs) and contribute to the immune escape of tumor cells, which is related to poor clinical outcome. It is worth establishing and optimizing an ideal prediction model based on the co-expression patterns of IC molecules to evaluate the immune status of HM patients and predict their clinical outcome. In this perspective, we summarize the co-expression patterns of IC molecules and their importance as biomarkers that predict the prognosis of patients with different HMs, providing new insights for designing dual IC blockades (ICBs).

免疫检查点(IC)分子的共表达可加剧血液学恶性肿瘤(HMs)患者的T细胞衰竭,促进肿瘤细胞的免疫逃逸,这与临床预后不良有关。建立并优化一种基于IC分子共表达模式的理想预测模型,以评估HM患者的免疫状态,预测其临床预后。从这个角度来看,我们总结了IC分子的共表达模式及其作为预测不同HMs患者预后的生物标志物的重要性,为设计双IC阻断剂(ICBs)提供了新的见解。
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引用次数: 3
Advancements in understanding mechanisms of hepatocellular carcinoma radiosensitivity: A comprehensive review. 肝细胞癌放射敏感性机制研究进展综述
Pub Date : 2023-06-30 DOI: 10.21147/j.issn.1000-9604.2023.03.06
Gaoyuan Yang, Huamei Yan, Yongchang Tang, Feng Yuan, Mingbo Cao, Yupeng Ren, Yuxuan Li, Zhiwei He, Xiaorui Su, Zhicheng Yao, Meihai Deng

Primary liver cancer is a significant health problem worldwide. Hepatocellular carcinoma (HCC) is the main pathological type of primary liver cancer, accounting for 75%-85% of cases. In recent years, radiotherapy has become an emerging treatment for HCC and is effective for various stages of HCC. However, radiosensitivity of liver cancer cells has a significant effect on the efficacy of radiotherapy and is regulated by various factors. How to increase radiosensitivity and improve the therapeutic effects of radiotherapy require further exploration. This review summarizes the recent research progress on the mechanisms affecting sensitivity to radiotherapy, including epigenetics, transportation and metabolism, regulated cell death pathways, the microenvironment, and redox status, as well as the effect of nanoparticles on the radiosensitivity of liver cancer. It is expected to provide more effective strategies and methods for clinical treatment of liver cancer by radiotherapy.

原发性肝癌是一个全球性的重大健康问题。肝细胞癌(HCC)是原发性肝癌的主要病理类型,占75%-85%的病例。近年来,放疗已成为HCC的一种新兴治疗方法,对肝癌的各个阶段都有效。然而,肝癌细胞的放射敏感性对放疗效果有显著影响,受多种因素调节。如何提高放射敏感性,提高放射治疗效果有待进一步探索。本文综述了近年来影响肝癌放疗敏感性的机制,包括表观遗传学、转运代谢、细胞死亡调控途径、微环境、氧化还原状态,以及纳米颗粒对肝癌放射敏感性的影响。期望为临床肝癌放疗治疗提供更有效的策略和方法。
{"title":"Advancements in understanding mechanisms of hepatocellular carcinoma radiosensitivity: A comprehensive review.","authors":"Gaoyuan Yang,&nbsp;Huamei Yan,&nbsp;Yongchang Tang,&nbsp;Feng Yuan,&nbsp;Mingbo Cao,&nbsp;Yupeng Ren,&nbsp;Yuxuan Li,&nbsp;Zhiwei He,&nbsp;Xiaorui Su,&nbsp;Zhicheng Yao,&nbsp;Meihai Deng","doi":"10.21147/j.issn.1000-9604.2023.03.06","DOIUrl":"https://doi.org/10.21147/j.issn.1000-9604.2023.03.06","url":null,"abstract":"<p><p>Primary liver cancer is a significant health problem worldwide. Hepatocellular carcinoma (HCC) is the main pathological type of primary liver cancer, accounting for 75%-85% of cases. In recent years, radiotherapy has become an emerging treatment for HCC and is effective for various stages of HCC. However, radiosensitivity of liver cancer cells has a significant effect on the efficacy of radiotherapy and is regulated by various factors. How to increase radiosensitivity and improve the therapeutic effects of radiotherapy require further exploration. This review summarizes the recent research progress on the mechanisms affecting sensitivity to radiotherapy, including epigenetics, transportation and metabolism, regulated cell death pathways, the microenvironment, and redox status, as well as the effect of nanoparticles on the radiosensitivity of liver cancer. It is expected to provide more effective strategies and methods for clinical treatment of liver cancer by radiotherapy.</p>","PeriodicalId":9830,"journal":{"name":"Chinese journal of cancer research = Chung-kuo yen cheng yen chiu","volume":"35 3","pages":"266-282"},"PeriodicalIF":0.0,"publicationDate":"2023-06-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10334493/pdf/cjcr-35-3-266.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"9807143","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
PTPRD/PTPRT mutation correlates to treatment outcomes of immunotherapy and immune landscape in pan-cancers. PTPRD/PTPRT突变与泛癌免疫治疗结果和免疫景观相关
Pub Date : 2023-06-30 DOI: 10.21147/j.issn.1000-9604.2023.03.09
Gangjian Wang, Xin Ji, Haojie Wang, Xiaohuan Tang, Xiaofang Xing, Jiafu Ji

Objective: PTPRD and PTPRT are phosphatases of the JAK-STAT pathway related to immunotherapy. However, the role and mechanism of PTPRD and PTPRT mutations in multiple cancers remains unclear.

Methods: Clinical data and PTPRD/PTPRT mutation information from 12 cohorts were collected and classified as a discovery cohort and three validation cohorts. The association between PTPRD/PTPRT mutations and immunotherapeutic efficacy was analyzed. Then, the association between PTPRD/PTPRT mutation and immune profiles was analyzed using The Cancer Genome Atlas (TCGA) cohort.

Results: A total of 2,392 patients across 20 cancer types were included in this study. Our results showed that patients harboring PTPRD/PTPRT mutation, especially co-mutations, had a significantly elevated response rate to immunotherapy in multiple cancers. Patients with PTPRD/PTPRT mutation had a higher objective response rate (ORR) (P=0.002), longer overall survival (OS) (P=0.005) and progression-free survival (PFS) (P=0.038). Importantly, the above findings were further verified in validation cohorts. In addition, we found that the PTPRD/PTPRT co-mutations (co-mut) subgroup exhibited an immune-activated phenotype, the wild-type subgroup tended to have an immune-desert phenotype, and the uni-mutation (uni-mut) subgroup might have an immune-mixed phenotype. Our further analyses suggested that combining programmed cell death ligand 1 (PD-L1) expression and PTPRD/PTPRT mutation can be used to screen patients who may benefit from immunotherapy.

Conclusions: PTPRD/PTPRT mutation could serve as a potential predictive biomarker for cancer immunotherapy.

目的:PTPRD和PTPRT是与免疫治疗相关的JAK-STAT通路的磷酸酶。然而,PTPRD和PTPRT突变在多种癌症中的作用和机制尚不清楚。方法:收集12个队列的临床资料和PTPRD/PTPRT突变信息,分为发现队列和验证队列。分析PTPRD/PTPRT突变与免疫治疗疗效的关系。然后,使用癌症基因组图谱(TCGA)队列分析PTPRD/PTPRT突变与免疫谱之间的关系。结果:共有20种癌症类型的2392名患者被纳入本研究。我们的研究结果表明,携带PTPRD/PTPRT突变的患者,特别是共突变的患者,对多种癌症的免疫治疗反应率显著提高。PTPRD/PTPRT突变患者客观缓解率(ORR)较高(P=0.002),总生存期(OS)较长(P=0.005),无进展生存期(PFS)较长(P=0.038)。重要的是,上述发现在验证队列中得到了进一步验证。此外,我们发现PTPRD/PTPRT共突变(co-mut)亚组表现出免疫激活表型,野生型亚组倾向于免疫荒漠表型,而单突变(unit -mut)亚组可能具有免疫混合表型。我们进一步的分析表明,结合程序性细胞死亡配体1 (PD-L1)表达和PTPRD/PTPRT突变可用于筛选可能受益于免疫治疗的患者。结论:PTPRD/PTPRT突变可作为癌症免疫治疗的潜在预测性生物标志物。
{"title":"PTPRD/PTPRT mutation correlates to treatment outcomes of immunotherapy and immune landscape in pan-cancers.","authors":"Gangjian Wang,&nbsp;Xin Ji,&nbsp;Haojie Wang,&nbsp;Xiaohuan Tang,&nbsp;Xiaofang Xing,&nbsp;Jiafu Ji","doi":"10.21147/j.issn.1000-9604.2023.03.09","DOIUrl":"https://doi.org/10.21147/j.issn.1000-9604.2023.03.09","url":null,"abstract":"<p><strong>Objective: </strong>PTPRD and PTPRT are phosphatases of the JAK-STAT pathway related to immunotherapy. However, the role and mechanism of PTPRD and PTPRT mutations in multiple cancers remains unclear.</p><p><strong>Methods: </strong>Clinical data and PTPRD/PTPRT mutation information from 12 cohorts were collected and classified as a discovery cohort and three validation cohorts. The association between PTPRD/PTPRT mutations and immunotherapeutic efficacy was analyzed. Then, the association between PTPRD/PTPRT mutation and immune profiles was analyzed using The Cancer Genome Atlas (TCGA) cohort.</p><p><strong>Results: </strong>A total of 2,392 patients across 20 cancer types were included in this study. Our results showed that patients harboring PTPRD/PTPRT mutation, especially co-mutations, had a significantly elevated response rate to immunotherapy in multiple cancers. Patients with PTPRD/PTPRT mutation had a higher objective response rate (ORR) (P=0.002), longer overall survival (OS) (P=0.005) and progression-free survival (PFS) (P=0.038). Importantly, the above findings were further verified in validation cohorts. In addition, we found that the PTPRD/PTPRT co-mutations (co-mut) subgroup exhibited an immune-activated phenotype, the wild-type subgroup tended to have an immune-desert phenotype, and the uni-mutation (uni-mut) subgroup might have an immune-mixed phenotype. Our further analyses suggested that combining programmed cell death ligand 1 (PD-L1) expression and PTPRD/PTPRT mutation can be used to screen patients who may benefit from immunotherapy.</p><p><strong>Conclusions: </strong>PTPRD/PTPRT mutation could serve as a potential predictive biomarker for cancer immunotherapy.</p>","PeriodicalId":9830,"journal":{"name":"Chinese journal of cancer research = Chung-kuo yen cheng yen chiu","volume":"35 3","pages":"316-330"},"PeriodicalIF":0.0,"publicationDate":"2023-06-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10334496/pdf/cjcr-35-3-316.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"9807140","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Adjuvant therapy for hormone receptor-positive breast cancer: Perspective from a survey on breast cancer physicians' acceptance of practice-changing data. 激素受体阳性乳腺癌症的辅助治疗:从癌症医生接受实际治疗数据的调查来看。
Pub Date : 2023-04-30 DOI: 10.21147/j.issn.1000-9604.2023.02.08
Asian Institute Of Clinical Oncology Aico Expert Panel

A cross-sectional online survey was conducted. A high proportion of the Chinese breast cancer (BC) physician respondents (n=77) would prescribe extended adjuvant endocrine therapy (AET) with aromatase inhibitors (AI) beyond 5 years for postmenopausal females with BC, especially those with higher risk. Respondents with ≥15 years of clinical experience were more likely to prescribe a longer duration of AET for low-risk patients. Half of the respondents considered intermittent letrozole as an acceptable option. Most respondents would prescribe adjuvant chemotherapy to genomic high-intermediate risk [Oncotype DX recurrence score (RS) 21-25] females aged ≤50 years regardless of the clinical risk classification.

进行了一项横断面在线调查。高比例的中国癌症(BC)医生受访者(n=77)会为绝经后患有乳腺癌的女性,特别是那些风险较高的女性,在5年后使用芳香化酶抑制剂(AI)进行扩展辅助内分泌治疗(AET)。具有≥15年临床经验的受试者更有可能为低风险患者开出更长时间的AET处方。一半的受访者认为间歇性来曲唑是一种可接受的选择。无论临床风险分类如何,大多数受访者都会为年龄≤50岁的基因组中高风险[肿瘤DX复发评分(RS)21-25]女性开具辅助化疗处方。
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引用次数: 0
Variant rs8400 enhances ALKBH5 expression through disrupting miR-186 binding and promotes neuroblastoma progression. 变体rs8400通过破坏miR-186的结合增强ALKBH5的表达,并促进神经母细胞瘤的进展。
Pub Date : 2023-04-30 DOI: 10.21147/j.issn.1000-9604.2023.02.05
Qian Guan, Huiran Lin, Wenfeng Hua, Lei Lin, Jiabin Liu, Linqing Deng, Jiao Zhang, Jiwen Cheng, Zhonghua Yang, Yong Li, Jun Bian, Haixia Zhou, Suhong Li, Li Li, Lei Miao, Huimin Xia, Jing He, Zhenjian Zhuo

Objective: AlkB homolog 5 (ALKBH5) has been proven to be closely related to tumors. However, the role and molecular mechanism of ALKBH5 in neuroblastomas have rarely been reported.

Methods: The potential functional single-nucleotide polymorphisms (SNPs) in ALKBH5 were identified by National Center for Biotechnology Information (NCBI) dbSNP screening and SNPinfo software. TaqMan probes were used for genotyping. A multiple logistic regression model was used to evaluate the effects of different SNP loci on the risk of neuroblastoma. The expression of ALKBH5 in neuroblastoma was evaluated by Western blotting and immunohistochemistry (IHC). Cell counting kit-8 (CCK-8), plate colony formation and 5-ethynyl-2'-deoxyuridine (EdU) incorporation assays were used to evaluate cell proliferation. Wound healing and Transwell assays were used to compare cell migration and invasion. Thermodynamic modelling was performed to predict the ability of miRNAs to bind to ALKBH5 with the rs8400 G/A polymorphism. RNA sequencing, N6-methyladenosine (m6A) sequencing, m6A methylated RNA immunoprecipitation (MeRIP) and a luciferase assay were used to identify the targeting effect of ALKBH5 on SPP1.

Results: ALKBH5 was highly expressed in neuroblastoma. Knocking down ALKBH5 inhibited the proliferation, migration and invasion of cancer cells. miR-186-3p negatively regulates the expression of ALKBH5, and this ability is affected by the rs8400 polymorphism. When the G nucleotide was mutated to A, the ability of miR-186-3p to bind to the 3'-UTR of ALKBH5 decreased, resulting in upregulation of ALKBH5. SPP1 is the downstream target gene of the ALKBH5 oncogene. Knocking down SPP1 partially restored the inhibitory effect of ALKBH5 downregulation on neuroblastoma. Downregulation of ALKBH5 can improve the therapeutic efficacy of carboplatin and etoposide in neuroblastoma.

Conclusions: We first found that the rs8400 G>A polymorphism in the m6A demethylase-encoding gene ALKBH5 increases neuroblastoma susceptibility and determines the related mechanisms. The aberrant regulation of ALKBH5 by miR-186-3p caused by this genetic variation in ALKBH5 promotes the occurrence and development of neuroblastoma through the ALKBH5-SPP1 axis.

目的:AlkB同源物5(ALKBH5)已被证实与肿瘤密切相关。然而,ALKBH5在神经母细胞瘤中的作用及其分子机制很少报道。方法:采用美国国家生物技术信息中心dbSNP筛选和SNPinfo软件对ALKBH5中潜在的功能性单核苷酸多态性(SNPs)进行鉴定。TaqMan探针用于基因分型。使用多元逻辑回归模型来评估不同SNP基因座对神经母细胞瘤风险的影响。用免疫组化和蛋白质印迹法检测ALKBH5在神经母细胞瘤中的表达。细胞计数试剂盒-8(CCK-8)、平板集落形成和5-乙炔基-2'-脱氧尿苷(EdU)掺入测定用于评估细胞增殖。伤口愈合和Transwell测定用于比较细胞迁移和侵袭。进行热力学建模以预测miRNA与rs8400G/A多态性的ALKBH5结合的能力。采用RNA测序、N6-甲基腺苷(m6A)测序、m6A甲基化RNA免疫沉淀(MeRIP)和荧光素酶测定法来鉴定ALKBH5对SPP1的靶向作用。敲除ALKBH5抑制癌症细胞的增殖、迁移和侵袭。miR-186-3p负调控ALKBH5的表达,这种能力受到rs8400多态性的影响。当G核苷酸突变为A时,miR-186-3p与ALKBH5的3'-UTR结合的能力降低,导致ALKBH5上调。SPP1是ALKBH5癌基因的下游靶基因。敲除SPP1部分恢复了ALKBH5下调对神经母细胞瘤的抑制作用。下调ALKBH5可提高卡铂和依托泊苷治疗神经母细胞瘤的疗效。结论:我们首次发现编码m6A去甲基酶基因ALKBH5的rs8400G>A多态性增加了神经母细胞瘤的易感性,并确定了相关机制。由ALKBH5的这种遗传变异引起的miR-186-3p对ALKBH5的异常调节通过ALKBH5-SP1轴促进神经母细胞瘤的发生和发展。
{"title":"Variant rs8400 enhances ALKBH5 expression through disrupting miR-186 binding and promotes neuroblastoma progression.","authors":"Qian Guan,&nbsp;Huiran Lin,&nbsp;Wenfeng Hua,&nbsp;Lei Lin,&nbsp;Jiabin Liu,&nbsp;Linqing Deng,&nbsp;Jiao Zhang,&nbsp;Jiwen Cheng,&nbsp;Zhonghua Yang,&nbsp;Yong Li,&nbsp;Jun Bian,&nbsp;Haixia Zhou,&nbsp;Suhong Li,&nbsp;Li Li,&nbsp;Lei Miao,&nbsp;Huimin Xia,&nbsp;Jing He,&nbsp;Zhenjian Zhuo","doi":"10.21147/j.issn.1000-9604.2023.02.05","DOIUrl":"10.21147/j.issn.1000-9604.2023.02.05","url":null,"abstract":"<p><strong>Objective: </strong>AlkB homolog 5 (ALKBH5) has been proven to be closely related to tumors. However, the role and molecular mechanism of ALKBH5 in neuroblastomas have rarely been reported.</p><p><strong>Methods: </strong>The potential functional single-nucleotide polymorphisms (SNPs) in <i>ALKBH5</i> were identified by National Center for Biotechnology Information (NCBI) dbSNP screening and SNPinfo software. TaqMan probes were used for genotyping. A multiple logistic regression model was used to evaluate the effects of different SNP loci on the risk of neuroblastoma. The expression of ALKBH5 in neuroblastoma was evaluated by Western blotting and immunohistochemistry (IHC). Cell counting kit-8 (CCK-8), plate colony formation and 5-ethynyl-2'-deoxyuridine (EdU) incorporation assays were used to evaluate cell proliferation. Wound healing and Transwell assays were used to compare cell migration and invasion. Thermodynamic modelling was performed to predict the ability of miRNAs to bind to <i>ALKBH5</i> with the rs8400 G/A polymorphism. RNA sequencing, N6-methyladenosine (m<sup>6</sup>A) sequencing, m<sup>6</sup>A methylated RNA immunoprecipitation (MeRIP) and a luciferase assay were used to identify the targeting effect of ALKBH5 on SPP1.</p><p><strong>Results: </strong>ALKBH5 was highly expressed in neuroblastoma. Knocking down ALKBH5 inhibited the proliferation, migration and invasion of cancer cells. miR-186-3p negatively regulates the expression of ALKBH5, and this ability is affected by the rs8400 polymorphism. When the G nucleotide was mutated to A, the ability of miR-186-3p to bind to the 3'-UTR of ALKBH5 decreased, resulting in upregulation of <i>ALKBH5</i>. <i>SPP1</i> is the downstream target gene of the <i>ALKBH5</i> oncogene. Knocking down SPP1 partially restored the inhibitory effect of ALKBH5 downregulation on neuroblastoma. Downregulation of ALKBH5 can improve the therapeutic efficacy of carboplatin and etoposide in neuroblastoma.</p><p><strong>Conclusions: </strong>We first found that the rs8400 G>A polymorphism in the m<sup>6</sup>A demethylase-encoding gene <i>ALKBH5</i> increases neuroblastoma susceptibility and determines the related mechanisms. The aberrant regulation of <i>ALKBH5</i> by miR-186-3p caused by this genetic variation in <i>ALKBH5</i> promotes the occurrence and development of neuroblastoma through the ALKBH5-SPP1 axis.</p>","PeriodicalId":9830,"journal":{"name":"Chinese journal of cancer research = Chung-kuo yen cheng yen chiu","volume":"35 2","pages":"140-162"},"PeriodicalIF":0.0,"publicationDate":"2023-04-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10167609/pdf/cjcr-35-2-140.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"9461901","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 8
Stomach cancer burden in China: Epidemiology and prevention. 中国癌症负担:流行病学与预防。
Pub Date : 2023-04-30 DOI: 10.21147/j.issn.1000-9604.2023.02.01
Xinxin Yan, Lin Lei, He Li, Maomao Cao, Fan Yang, Siyi He, Shaoli Zhang, Yi Teng, Qianru Li, Changfa Xia, Wanqing Chen

In 2020, stomach cancer was the fifth most commonly diagnosed cancer and the fourth leading cause of cancer-related death worldwide. Due to the relatively huge population base and the poor survival rate, stomach cancer is still a threat in China, and accounts for nearly half of the cases worldwide. Fortunately, in China, the incidence and mortality rates of stomach cancer presented a declining trend owing to the change of individual life styles and the persistent efforts to prevent stomach cancer from the governments at all levels. Helicobacter pylori (H. pylori) infection, poor eating habits, smoking, history of gastrointestinal disorders, and family history of stomach cancer are the main risk factors for stomach cancer in China. As a result, by taking risk factors for stomach cancer into account, specific preventive measures, such as eradicating H. pylori and implementing stomach cancer screening projects, should be taken to better prevent and decrease the burden of stomach cancer.

2020年,癌症是全球第五大最常见的癌症和第四大癌症相关死亡原因。由于相对庞大的人口基础和较差的存活率,癌症在中国仍然是一个威胁,并占全球病例的近一半。幸运的是,在中国,由于个体生活方式的改变和各级政府预防癌症的不懈努力,癌症的发病率和死亡率呈下降趋势。幽门螺杆菌(H.pylori)感染、不良饮食习惯、吸烟、胃肠道疾病史、胃癌症家族史是我国癌症的主要危险因素。因此,考虑到癌症的危险因素,应采取具体的预防措施,如根除幽门螺杆菌和实施胃癌症筛查项目,以更好地预防和减轻癌症的负担。
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引用次数: 0
期刊
Chinese journal of cancer research = Chung-kuo yen cheng yen chiu
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