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Integrative Biology: Issues, News, and Reviews最新文献

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Society News 社会新闻
Pub Date : 1999-03-25 DOI: 10.1002/(SICI)1520-6602(1998)1:6<234::AID-INBI6>3.0.CO;2-H
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引用次数: 0
Message in a bottle? Utility and limitations of recent ecological bottle experiments 瓶子里的信息?近期生态瓶实验的效用与局限性
Pub Date : 1999-03-25 DOI: 10.1002/(SICI)1520-6602(1998)1:6<209::AID-INBI2>3.0.CO;2-X
Elizabeth E. Crone, Jane Molofsky

Many classic tests of ecological theory have involved populations and communities maintained for many generations in the laboratory under tightly controlled conditions. In spite of this, such “bottle experiments” now play only a minor role within the larger field of ecology, and their relevance to natural populations and communities is regarded with suspicion by many field ecologists. Here, we compare and critique several recent bottle experiments, which were designed to test open questions in ecological theory that could never feasibly be addressed in natural communities. Judging from this set of experiments, we suspect that it will be difficult to relate the qualitative results of bottle experiments to natural populations and communities. What we learn from these experiments depends heavily on the relationship between theoretical models and experimental design. If the demography of organisms is completely under experimental control, bottle experiments can teach us about the possible range of population dynamics, but not about what regulates dynamics in natural populations. Furthermore, if experimental results are not linked to a mechanistic model, we can support or refute broad generalizations, but there is no direct way to relate bottle experiments to natural communities. Consequently, we argue that the most informative bottle experiments must incorporate both mechanistic models and unmanipulated demography; such bottle experiments can generate new ideas and future directions for both empirical and theoretical research.

生态学理论的许多经典测试都涉及在严格控制的条件下在实验室中维持了许多代的种群和群落。尽管如此,这种“瓶子实验”现在在更大的生态学领域中只起着很小的作用,而且它们与自然种群和群落的相关性受到许多野外生态学家的怀疑。在这里,我们比较和批评了最近的几个瓶子实验,这些实验旨在测试生态理论中永远无法在自然群落中解决的开放性问题。从这组实验来看,我们怀疑很难将瓶子实验的定性结果与自然种群和社区联系起来。我们从这些实验中学到的东西在很大程度上取决于理论模型和实验设计之间的关系。如果生物的人口统计完全处于实验控制之下,那么瓶子实验可以告诉我们种群动态的可能范围,但不能告诉我们是什么调节了自然种群的动态。此外,如果实验结果与机械模型无关,我们可以支持或反驳广泛的概括,但没有直接的方法将瓶子实验与自然群落联系起来。因此,我们认为,最翔实的瓶子实验必须结合机械模型和未经操纵的人口统计;这样的瓶子实验可以为实证和理论研究提供新的思路和未来的方向。
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引用次数: 7
Nature in a bottle? 瓶装自然?
Pub Date : 1999-03-25 DOI: 10.1002/(SICI)1520-6602(1998)1:6<207::AID-INBI1>3.0.CO;2-1
Peter Kareiva
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引用次数: 0
A new model for olfactory imprinting in salmon 鲑鱼嗅觉印迹的新模型
Pub Date : 1999-03-25 DOI: 10.1002/(SICI)1520-6602(1998)1:6<215::AID-INBI3>3.0.CO;2-V
Gabrielle Nevitt, Andrew Dittman

Olfactory imprinting is a specialized form of unconditioned learning in which olfactory information is acquired and then used in some specific behavioral context later in life. One of the hallmarks of olfactory imprinting is that it tends to be linked to a sensitive period of development. This prerequisite thus distinguishes olfactory imprinting from other types of odor learning in which only conditioned exposure to an odor stimulus is required for learning to occur. Most investigations designed to explore the mechanisms underlying olfactory imprinting have focused on mammalian species, concentrating on synaptic events at the level of the main and accessory olfactory bulbs.1 Recent integrative studies with salmon2,3 and rabbits,4 however, provide compelling evidence that highly specific imprinted odor memories may also be retained in the periphery, i.e., at the level of the olfactory epithelium proper. These results suggest that populations of olfactory receptor neurons may be selectively tuned to respond to odor molecules present during a hormonally linked sensitive period. A potential key to the mechanism of how these peripheral odor memories become established draws on the unique ability of olfactory receptor neurons to turn over throughout an organism's life span.5 How hormonal and environmental factors work together to influence olfactory neurogenesis is currently only sketchily understood,6 but ultimately may provide important new insights not only for basic science but for salmon conservation as well.

嗅觉印记是一种特殊形式的无条件学习,在这种学习中,嗅觉信息被获取,然后在以后的生活中用于某些特定的行为环境。嗅觉印记的一个特点是,它往往与发育的敏感时期有关。因此,这个先决条件将嗅觉印迹与其他类型的气味学习区分开来,在其他类型的气味学习中,只有条件暴露于气味刺激才能发生学习。大多数旨在探索嗅觉印迹机制的研究都集中在哺乳动物身上,主要集中在主嗅球和副嗅球水平上的突触事件然而,最近对鲑鱼2、3和兔子4的综合研究提供了令人信服的证据,表明高度特异性的印迹气味记忆也可能保留在外周,即在嗅上皮本身的水平上。这些结果表明,在激素相关的敏感期,嗅觉受体神经元群可能会选择性地对存在的气味分子做出反应。这些外围气味记忆如何建立的机制的一个潜在的关键是利用嗅觉受体神经元在生物体的整个生命周期中进行转换的独特能力荷尔蒙和环境因素是如何共同影响嗅觉神经发生的,目前还只是粗略地了解,但最终可能不仅为基础科学,也为鲑鱼保护提供重要的新见解。
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引用次数: 58
We are sponges: Phylogenetic systematics is getting a tad silly 我们是海绵:系统发育系统学变得有点傻了
Pub Date : 1999-03-25 DOI: 10.1002/(SICI)1520-6602(1998)1:6<231::AID-INBI5>3.0.CO;2-N
John S. Pearse

Phylogenetic systematics, as espoused in a recent book review by Harry W. Greene published in this journal, promotes the idea that paraphyly obscures the recognition of phylogenetic relationships and other aspects of organismic biology. I argue here that this viewpoint is not only without merit (what, in fact, do derived taxa tell us about paraphyletic taxa?), but that insistence on holophyly in itself may obscure ready appreciation of phylogenetic relationships. It has been recognized and accepted for the better part of this century that taxonomic groups at all levels may be derived from within other taxonomic groups, resulting in paraphyly. This phenomenon is becoming more and more evident as cladistic analyses of molecular and morphological data are more penetrating, and many well-defined taxa, including sponges, are now seen as probably paraphyletic. Computer-based cladistic analysis, integrating both molecular and morphological characters, is a powerful and increasingly essential approach for sorting out and establishing both sister-group and paraphyletic relationships. Paraphyletic taxa should be recognized as such for the fascinating perspective they provide in unraveling evolutionary patterns.

正如Harry W. Greene最近在本刊上发表的一篇书评所支持的那样,系统发育系统学提出了一种观点,即系统发育关系和有机体生物学的其他方面在一定程度上模糊了对系统发育关系的认识。我在这里认为,这种观点不仅毫无价值(事实上,衍生分类群能告诉我们关于副类群的什么信息?),而且坚持完整性本身可能会模糊对系统发育关系的现成认识。在本世纪的大部分时间里,人们已经认识到并接受了所有层次的分类类群都可以从其他分类类群中派生出来,从而产生类属。随着分子和形态数据的分支分析越来越深入,这种现象变得越来越明显,许多定义明确的分类群,包括海绵,现在被认为可能是副纲的。基于计算机的枝系分析,整合了分子和形态特征,是一种强大且日益重要的方法,用于分类和建立姐妹群和副类群关系。副葡萄类群应该被认为是这样的,因为它们为揭示进化模式提供了迷人的视角。
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引用次数: 3
Integrating behavior with neurobiology: Odor-mediated moth flight and olfactory discrimination by glomerular arrays 行为与神经生物学的整合:气味介导的飞蛾飞行和肾小球阵列的嗅觉辨别
Pub Date : 1999-03-25 DOI: 10.1002/(SICI)1520-6602(1998)1:6<224::AID-INBI4>3.0.CO;2-Q
Neil J. Vickers, Thomas A. Christensen, John G. Hildebrand

Animals are equipped with a variety of sensory systems that allow them to extract information from the environments they inhabit. The ability to detect the chemical environment is probably the most ancient sense. The sense of smell can provide important details about the habitat because chemical signals emitted by both beneficial and potentially harmful sources can be detected and appropriate behavior initiated without relying upon input from other sensory modalities. Even though olfactory communication can be slow compared to other sensory modalities such as vision and sound, it is sometimes very reliable and stable (e.g. trail or territory marking) and in other circumstances may be much more ephemeral (e.g. odors released only during specific periods of the day or night). Thus, olfactory cues can be manipulated over time and spatial scales that other sensory modalities cannot, and this is perhaps why we find an abundance of olfactory communication in the animal world. For adult moths, olfactory signals are a vital source of information that modulate many aspects of their behavior. In these animals, an appreciation of the features of odors coupled with behavioral experimentation has enhanced our understanding of the neurobiology of olfactory processing.

动物具有各种各样的感觉系统,使它们能够从所居住的环境中提取信息。探测化学环境的能力可能是最古老的感觉。嗅觉可以提供有关栖息地的重要细节,因为可以检测到有益和潜在有害来源发出的化学信号,并在不依赖其他感官模式输入的情况下启动适当的行为。尽管与视觉和声音等其他感官方式相比,嗅觉交流可能很慢,但它有时非常可靠和稳定(例如,标记踪迹或领土),在其他情况下,嗅觉交流可能更加短暂(例如,仅在白天或晚上的特定时间段释放气味)。因此,嗅觉线索可以在时间和空间尺度上被操纵,这是其他感觉方式无法做到的,这也许就是为什么我们在动物世界中发现了丰富的嗅觉交流。对于成年飞蛾来说,嗅觉信号是调节其行为许多方面的重要信息来源。在这些动物中,对气味特征的欣赏加上行为实验增强了我们对嗅觉处理的神经生物学的理解。
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引用次数: 5
Prion infection dynamics 朊病毒感染动力学
Pub Date : 1999-01-07 DOI: 10.1002/(SICI)1520-6602(1998)1:1<3::AID-INBI2>3.0.CO;2-9
Martin A. Nowak, David C. Krakauer, Aron Klug, Robert M. May

Propagation of a modified form of the cellular prion protein is thought to be the primary cause of the transmissible spongiform encephalopathies, which include kuru, Creutzfeldt-Jakob disease (CJD), scrapie, and bovine spongiform encephalopathy (BSE). These highly unusual neurological maladies seem to arise spontaneously at extremely low rates. In addition, these diseases can be transmitted directly, in which case the incubation period is remarkably constant. The challenge is to understand these crucial features of prion diseases, without invoking the action of any viral agent. A simple model is developed in which the onset and progression of spongiform encephalopathies are explained by the kinetics of prion aggregate formation. Interestingly, ordered aggregations of proteins such as occurs in prion diseases are also associated with other neurological disorders such as Alzheimer's disease. Thus, insights developed about prion aggregation may have wide significance. © 1998 Wiley-Liss, Inc.

细胞朊蛋白修饰形式的繁殖被认为是传染性海绵状脑病的主要原因,包括库鲁病、克雅氏病(CJD)、痒病和牛海绵状脑病(BSE)。这些极不寻常的神经系统疾病似乎以极低的发生率自发出现。此外,这些疾病可以直接传播,在这种情况下,潜伏期非常持久。我们面临的挑战是,在不动用任何病毒制剂的情况下,了解朊病毒疾病的这些关键特征。一个简单的模型,其中海绵状脑病的发病和进展是由朊病毒聚集形成的动力学解释。有趣的是,蛋白质的有序聚集,如发生在朊病毒疾病中,也与其他神经系统疾病,如阿尔茨海默病有关。因此,关于朊病毒聚集的见解可能具有广泛的意义。©1998 Wiley-Liss, Inc
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引用次数: 66
Integrative Biology will lead the way 综合生物学将引领这条道路
Pub Date : 1999-01-07 DOI: 10.1002/(SICI)1520-6602(1998)1:1<42::AID-INBI6>3.0.CO;2-%23
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引用次数: 0
The origins of multicellularity 多细胞生物的起源
Pub Date : 1999-01-07 DOI: 10.1002/(SICI)1520-6602(1998)1:1<27::AID-INBI4>3.0.CO;2-6
John Tyler Bonner

There is great interest in the invention of multicellularity because it is one of the major transitions during the course of early evolution.1 Most of the emphasis has been on why it occurred. For instance, recently Gerhart and Kirschner2 have argued that a multicellular organism has gained the advantage of a unicellular ancestor because it can more effectively shield itself from the vagaries of the environment by producing its own internal environment. In broader terms, this is Dawkins'3 argument that a competitively effective way of carrying the genes from one generation to the next is by building a complex soma that safely sees to it that the germ plasm survives. © 1998 Wiley-Liss, Inc.

人们对多细胞生物的发明非常感兴趣,因为它是早期进化过程中的主要转变之一大部分的重点都放在了它发生的原因上。例如,最近Gerhart和Kirschner2认为,多细胞生物获得了单细胞祖先的优势,因为它可以通过创造自己的内部环境,更有效地保护自己免受环境变化的影响。从更广泛的意义上说,这就是道金斯的观点:将基因从一代传递到下一代的一种竞争有效的方式是建立一个复杂的体细胞,以确保种质能够安全地存活下来。©1998 Wiley-Liss, Inc
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引用次数: 241
What is ecotoxicology? An ad-hoc grab bag or an interdisciplinary science? 什么是生态毒理学?一个特别的袋子还是一门跨学科的科学?
Pub Date : 1999-01-07 DOI: 10.1002/(SICI)1520-6602(1998)1:5<195::AID-INBI5>3.0.CO;2-3
John E. Banks, John D. Stark

Ecotoxicology is a new discipline that supposedly melds the fields of ecology and toxicology. Yet as today's scientists grapple with wide-ranging environmental degradation, the field of ecotoxicology often seems an ineffectual, naïve and confused science, far from a seamless merger of two well-established and respected disciplines. We set out to examine the current state of ecotoxicology, paying special attention to some of the major simplifications and misunderstandings that underlie its weaknesses. By exposing major areas of needed improvement, we hope to point the way towards giving ecotoxicology a more prominent voice in the analysis of pressing contemporary environmental problems.

生态毒理学是一门融合生态学和毒理学的新兴学科。然而,当今天的科学家们与大范围的环境退化作斗争时,生态毒理学领域往往看起来是一门无效的、naïve和混乱的科学,远远不是两门公认和受人尊敬的学科的无缝合并。我们开始研究生态毒理学的现状,特别注意一些主要的简化和误解,这些简化和误解是其弱点的基础。通过揭示需要改进的主要领域,我们希望指出在分析紧迫的当代环境问题时给予生态毒理学更突出的声音的方法。
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引用次数: 42
期刊
Integrative Biology: Issues, News, and Reviews
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