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TAPAS: Transient Absorption Processing and Analysis Software 瞬态吸收处理和分析软件
IF 3 4区 化学 Q3 CHEMISTRY, PHYSICAL Pub Date : 2026-01-26 DOI: 10.1002/cptc.202500236
Philipp Frech, Marcus Scheele

We present Transient Absorption Processing and Analysis Software (TAPAS), an open-source, Python-based graphical platform that covers the entire transient absorption (TA) workflow, from raw data import and preprocessing to visualization, global and target fitting, and statistical evaluation. Users operate TAPAS through an intuitive, seven-tab GUI, yet all underlying modules remain accessible for inspection and extension, merging GUI convenience with script-level flexibility. The fitting engine employs just-in-time compilation via an open-source machine learning compiler ecosystem, delivering two–20-fold speed gains over established packages. Automatic differentiation and residual-based effective-sample-size calculations yield reliable confidence intervals and correlation matrices, while an integrated sampling routine provides full Bayesian posterior exploration—diagnostics which are rarely available in other TA tools. All raw, processed, and fitted data are written to standardized Hierarchical Data Format 5 containers and automatically annotated with rich metadata, ensuring complete provenance. An extended case study on Rose Bengal shows how TAPAS first reveals hidden lifetime correlations, then employs broadband global and target analysis to merge TA traces with complementary steady-state and literature data, yielding a single, self-consistent kinetic model. By uniting advanced uncertainty quantification and transparent data management within a user-friendly interface, TAPAS closes the gap between accessibility and rigorous statistical treatment in TA spectroscopy.

我们介绍了瞬态吸收处理和分析软件(TAPAS),这是一个基于python的开源图形平台,涵盖了整个瞬态吸收(TA)工作流程,从原始数据导入和预处理到可视化,全局和目标拟合以及统计评估。用户通过直观的七选项卡GUI操作TAPAS,但所有底层模块仍然可以进行检查和扩展,将GUI的便利性与脚本级灵活性相结合。装配引擎通过开源机器学习编译器生态系统采用即时编译,比现有软件包提供2 - 20倍的速度提升。自动微分和基于残差的有效样本大小计算产生可靠的置信区间和相关矩阵,而集成的采样程序提供了其他TA工具中很少提供的完整的贝叶斯后验勘探诊断。所有原始的、处理过的和拟合的数据都被写入标准化的分层数据格式5容器中,并用丰富的元数据自动注释,确保完整的来源。对Rose Bengal的扩展案例研究表明,TAPAS如何首先揭示隐藏的寿命相关性,然后使用宽带全局和目标分析将TA痕迹与互补的稳态和文献数据合并,从而产生单一的、自一致的动力学模型。通过在用户友好的界面中统一先进的不确定度量化和透明的数据管理,TAPAS缩小了TA光谱中可访问性和严格统计处理之间的差距。
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引用次数: 0
Front Cover: Rational Modulation of Excited-State Intramolecular Proton Transfer, Aggregation-Induced Emission, and Intramolecular Motion on Polysubstituted Imidazoles (ChemPhotoChem 1/2026) 封面:多取代咪唑分子内激发态质子转移、聚集诱导发射和分子内运动的合理调制(ChemPhotoChem 1/2026)
IF 3 4区 化学 Q3 CHEMISTRY, PHYSICAL Pub Date : 2026-01-16 DOI: 10.1002/cptc.70099
Ángel D. Álvarez-Castillo, Alexis Juárez-Morales, Dazaet Galicia-Badillo, Mauricio Maldonado-Domínguez, Ernesto Enríquez-Palacios, José M. Heredia-Peñaloza, Marcos Flores-Álamo, José L. Belmonte-Vázquez

The Front Cover illustrates the concept of the “ESIPT machine,” symbolizing the synthesis of N-substituted imidazoles via the Debus–Radziszewski reaction. The assembly line represents the multi-component process leading to molecules that could exhibit a tunable solvent-dependent excited-state intramolecular proton transfer (ESIPT) process. More information can be found in the Research Article by J. L. Belmonte-Vázquez and co-workers (DOI: 10.1002/cptc.202500262). Illustration by Armando Navarro-Huerta.

封面说明了“ESIPT机器”的概念,象征着通过Debus-Radziszewski反应合成n -取代咪唑。装配线代表了多组分过程,导致分子可以表现出可调的溶剂依赖性激发态分子内质子转移(ESIPT)过程。更多信息可以在j.l. Belmonte-Vázquez和同事的研究文章中找到(DOI: 10.1002/cptc.202500262)。Armando Navarro-Huerta插图。
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引用次数: 0
Bis-Diimine Rhenium(I) Complexes for Biomedical Photoacoustic Tomography 用于生物医学光声成像的双二亚胺铼(I)配合物
IF 3 4区 化学 Q3 CHEMISTRY, PHYSICAL Pub Date : 2025-12-24 DOI: 10.1002/cptc.202500305
Svetlana G. Madieva, Kristina S. Kisel, Julia R. Shakirova, Elizaveta V. Durova, Sergey A. Silonov, Vitaly V. Porsev, Robert A. Evarestov, Pavel V. Subochev, Alexey A. Kurnikov, Anna G. Orlova, Ilya V. Turchin, Tzu-Ming Liu, Sergey P. Tunik

A series of bis-diimine rhenium(I) complexes Re(NN1-OMe)Re(NN3-OMe), containing neocuproine and methyl [2-(pyridin-2-yl)quinoline-4-carboxylate (NN1), methyl [2,2′-biquinoline]-4-carboxylate (NN2), dimethyl [2,2′-biquinoline]−4,4′-dicarboxylate (NN3) was synthesized and characterized. Utilization of the asymmetric NN1 and NN2 ligands affords two types of structural isomers, which were isolated and structurally studied by X-ray diffraction analysis in the solid state. 1H-1H COSY and NOESY NMR experiments confirmed preservation of the structural patterns in liquid media for the complexes under study. Alkaline hydrolysis of the ester groups in the NN# diimine ligands was performed to give the Re(NN1-OK)Re(NN3-OK) complexes exhibiting higher water solubility that made possible to use them in biological experiments. In MeOH and aqueous media, the complexes display NIR absorption with a long wavelength band at ca. 715 nm extended up to 850 nm in the case of both forms of Re(NN3)-OX. The Re(NN3-OK) complex demonstrated stable photoacoustic signal in oxygenated blood phantoms and showed no significant toxicity with the cell viability above 80% even at concentrations of 1 mM in cell experiments with CHO-K1 cell line.

合成了一系列含新根碱和甲基[2-(吡啶-2-基)喹啉-4-羧酸盐(NN1)、甲基[2,2′-双喹啉]-4-羧酸盐(NN2)、二甲基[2,2′-双喹啉]- 4,4′-二羧酸盐(NN3)的双二亚胺铼配合物Re(NN1- ome) - Re(NN3- ome)。利用不对称的NN1和NN2配体可以得到两种结构异构体,并通过x射线衍射分析在固态下对其进行了分离和结构研究。1H-1H COSY和NOESY NMR实验证实了所研究的配合物在液体介质中结构模式的保存。对nn#二亚胺配体中的酯基进行碱性水解,得到具有较高水溶性的Re(NN1-OK) - Re(NN3-OK)配合物,这使得它们可以用于生物实验。在MeOH和水介质中,Re(NN3)-OX均表现出较长的近红外吸收,波长范围约为715 nm,两种形式的Re(NN3)-OX均扩展到850 nm。在CHO-K1细胞系的细胞实验中,Re(NN3-OK)复合物在氧合血幻象中表现出稳定的光声信号,即使在浓度为1 mM的情况下,细胞存活率也在80%以上,没有明显的毒性。
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引用次数: 0
Research Progress of Metal–Organic Radical Materials and Applications 金属有机自由基材料及其应用研究进展
IF 3 4区 化学 Q3 CHEMISTRY, PHYSICAL Pub Date : 2025-12-14 DOI: 10.1002/cptc.202500243
Xiang Li, Tao Yi, Hongwei Wu

Metal–organic radical luminescent materials, as an emerging research direction in the field of optoelectronic functional materials, have attracted extensive attention due to their unique open-shell electronic structures and controllable photophysical properties. This review provides an in-depth discussion of metal–organic free radical materials from multiple perspectives, including the optical physical properties, construction strategies, metal action mechanisms, and practical applications in the field of photoelectric magnetism. Especially in terms of the interaction between metals and organic radicals as well as the applications, the specific influence of the charge-transfer process between metals and organic radicals was discussed in detail, along with the potential applications in fields such as photodriven sensing, photothermal conversion, and photoelectromagnetic coupling. Although the number of literature on metal–organic free radicals has significantly increased in recent years, most existing research articles and review articles are limited to specific metal systems and lack systematic comparison. The depth of discussion on the structure–activity relationship of the materials is insufficient, and the discussion on the application transformation path is also rather vague. This review aims to break through the above limitations, provide comprehensive references for researchers, and promote the further development of the field of metal–organic free radical luminescent materials.

金属有机自由基发光材料作为光电功能材料领域的一个新兴研究方向,因其独特的开壳电子结构和光物理性质可控而受到广泛关注。本文综述了金属有机自由基材料的光学物理性质、构建策略、金属作用机理以及在光电磁性领域的实际应用等方面的研究进展。特别是在金属与有机自由基的相互作用和应用方面,详细讨论了金属与有机自由基之间电荷转移过程的具体影响,以及在光驱动传感、光热转换和光电磁耦合等领域的潜在应用。虽然近年来关于金属有机自由基的文献数量显著增加,但现有的研究文章和综述文章大多局限于特定的金属体系,缺乏系统的比较。对材料构效关系的探讨深度不足,对应用转化路径的探讨也比较模糊。本文旨在突破上述局限,为研究人员提供全面参考,促进金属有机自由基发光材料领域的进一步发展。
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引用次数: 0
Cover Feature: Distonic Radical Cations in Visible-Light-Driven Cycloadditions (ChemPhotoChem 12/2025) 封面特写:可见光驱动环加成中的双离子自由基阳离子(ChemPhotoChem 12/2025)
IF 3 4区 化学 Q3 CHEMISTRY, PHYSICAL Pub Date : 2025-12-13 DOI: 10.1002/cptc.70071
Saradindu Debnath, Soumitra Maity

The Cover Feature illustrates the formation of cycloaddition products through the key “distonic radical cation” intermediates that can be generated from a variety of redox active molecules. Various reagents, depicted as water bubbles, rise through the photoredox fountain, getting converted to their respective distonic radical cation forms. Subsequent reaction with suitable partners, leads to the formation of various cycloadducts represented by the water droplets emerging out of the fountain. More information can be found in the Review by S. Debnath and S. Maity (DOI: 10.1002/cptc.202500249). Art by Arunima Mukherjee.

封面特征说明了通过关键的“双离子自由基阳离子”中间体形成环加成产物,这些中间体可以由各种氧化还原活性分子产生。各种试剂,被描绘成水泡,通过光氧化还原喷泉上升,转化为各自的双离子自由基阳离子形式。随后与合适的伙伴反应,导致形成以喷泉中出现的水滴为代表的各种环加合物。更多信息可以在S. Debnath和S. Maity的评论中找到(DOI: 10.1002/cptc.202500249)。Arunima Mukherjee艺术。
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引用次数: 0
Front Cover: Lysosome-Targeted Aggregation-Induced Emission Photosensitizer with Donor–Acceptor Structure for Imaging and Enhanced Photodynamic Therapy (ChemPhotoChem 12/2025) 封面:用于成像和增强光动力治疗的具有供受体结构的溶酶体靶向聚集诱导发射光敏剂(ChemPhotoChem 12/2025)
IF 3 4区 化学 Q3 CHEMISTRY, PHYSICAL Pub Date : 2025-12-13 DOI: 10.1002/cptc.70072
L. Palanikumar, Yujing Zuo, Alexander Schiller, Upendar Reddy Gandra, Mohamed Infas Haja Mohideen, Mazin Magzoub

The Front Cover illustrates the mode of action of Lyso-Naphth-AIE, a novel aggregation-induced emission (AIE) photosensitizer (PS) that specifically targets lysosomes. Upon light irradiation, Lyso-Naphth-AIE (white structure) generates reactive oxygen species (ROS, red spheres) through both type I and II photodynamic therapy (PDT) mechanisms, and this triggers apoptosis. Additionally, the near-infrared luminescence of the activated Lyso-Naphth-AIE enables real-time imaging. This work establishes a new approach for designing multifunctional AIE PSs for imaging-guided PDT. More information can be found in the Research Article by U. R. Gandra, M. I. Haja Mohideen, M. Magzoub and co-workers (DOI: 10.1002/cptc.202500202).

封面说明了Lyso-Naphth-AIE的作用模式,这是一种新型的聚集诱导发射(AIE)光敏剂(PS),专门针对溶酶体。在光照射下,Lyso-Naphth-AIE(白色结构)通过I型和II型光动力治疗(PDT)机制产生活性氧(ROS,红色球体),从而引发细胞凋亡。此外,活化的Lyso-Naphth-AIE的近红外发光使实时成像成为可能。本研究为成像引导PDT的多功能AIE ps设计提供了一种新的思路。更多信息可以在U. R. Gandra, M. I. Haja Mohideen, M. Magzoub及其同事的研究文章中找到(DOI: 10.1002/ cptp .202500202)。
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引用次数: 0
Photophysical Modulation of an Elongated Ir(III) Complex by a Resorcin[4]arene Monomer Host 间苯二酚[4]芳烃单体宿主对细长Ir(III)配合物的光物理调制
IF 3 4区 化学 Q3 CHEMISTRY, PHYSICAL Pub Date : 2025-12-12 DOI: 10.1002/cptc.202500343
Shota Ogura, Hiroki Uratani, Shinnosuke Horiuchi

Molecular recognition of guest molecules within confined cavities enables effective modulation of their chemical and physical properties through noncovalent interactions. Because these modulated properties reflect the structural features of the host–guest assembly, the guest molecule can serve as a molecular probe to elucidate the origin of the host-induced modulation. Herein, we report the formation of a host–guest complex composed of an emissive Ir(III) complex salt and a resorcin[4]arene host, along with the photophysical modulation of the guest via noncovalent interactions with the host. NMR spectroscopic analysis reveals a 1:1 binding stoichiometry, in contrast to the previously reported 6:1 stoichiometry, because the guest is larger than the cavity of the resorcin[4]arene hydrogen-bonded hexameric capsule. This 1:1 binding mode is unambiguously confirmed by single-crystal X-ray diffraction analysis. The photoluminescent properties of the Ir(III) complex are enhanced in the presence of the host, indicating that electronic communication between the host and the guest plays a crucial role in modulating its photophysical behavior. These findings are further supported by density functional theory calculations. Overall, this article provides new insights into the photophysical dynamics of entrapped emitters and highlights the pivotal role of host–guest interactions in tuning emission properties.

在密闭腔内对客体分子的分子识别可以通过非共价相互作用有效地调节客体分子的化学和物理性质。由于这些调制特性反映了宿主-客体组装的结构特征,客体分子可以作为分子探针来阐明宿主诱导调制的起源。在本文中,我们报道了由发光Ir(III)配合物盐和间苯二酚[4]芳烃宿主组成的主-客体配合物的形成,以及客体通过与宿主的非共价相互作用进行光物理调节。核磁共振光谱分析揭示了1:1的结合化学计量,而不是之前报道的6:1的化学计量,因为客体比间苯二酚[4]芳烃氢键六聚体胶囊的腔大。单晶x射线衍射分析明确地证实了这种1:1的结合模式。Ir(III)配合物的光致发光性能在主体存在下得到增强,表明主体与客体之间的电子通信在调节其光物理行为中起着至关重要的作用。这些发现得到了密度泛函理论计算的进一步支持。总的来说,这篇文章提供了对捕获发射体的光物理动力学的新见解,并强调了主客体相互作用在调节发射特性中的关键作用。
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引用次数: 0
Novel UiO-66-NH2/W18O49 Photocatalyst for Enhanced Nitrogen Fixation to Ammonia Under Visible Light: Improved Efficiency and New Mechanisms 新型UiO-66-NH2/W18O49光催化剂在可见光下加强氨固氮:提高效率和新机制
IF 3 4区 化学 Q3 CHEMISTRY, PHYSICAL Pub Date : 2025-12-12 DOI: 10.1002/cptc.202500261
Parva Bayat-Makou, Saeed Dehghanpour

Converting atmospheric nitrogen (N2) into ammonia (NH3) by sustainable methods presents a significant challenge in green chemistry. Photocatalytic N2 fixation under visible light offers a promising solution, provided efficient catalysts can effectively weaken the strong N≡N bond. In this study, we present a composite photocatalyst composed of the metal–organic framework (MOF) UiO-66-NH2 and substoichiometric tungsten oxide (W18O49). The oxygen vacancies in W18O49 extend its visible light absorption, while UiO-66-NH2 provides a high surface area and amine-functionalized linkers that enhance light harvesting. We synthesized UiO-66-NH2/W18O49 composites with varying UiO-66-NH2 contents (30%, 50%, and 70% by weight) and evaluated their photocatalytic performance under visible-light irradiation. The 50% UiO-66-NH2/W18O49 composite exhibited the highest NH3 production rate of 420.8 μmol g−1 h−1, which is 27.2 times higher than that of pure UiO-66-NH2 and 10.9 times higher than that of W18O49. This enhancement is attributed to the synergistic heterojunction between UiO-66-NH2 and W18O49, where the MOF provides a large surface area and efficient light absorption, while W18O49 contributes plasmon-generated hot electrons and abundant oxygen vacancies. The composite demonstrates broadened visible-light absorption, efficient charge separation, and rapid charge transfer, thus suppressing electron–hole recombination. These results highlight the potential of the UiO-66-NH2/W18O49 composite as an effective photocatalyst for solar-driven ammonia production under mild conditions.

通过可持续的方法将大气中的氮(N2)转化为氨(NH3)是绿色化学中的一个重大挑战。可见光下的光催化N2固定提供了一个很有前途的解决方案,前提是高效的催化剂可以有效地削弱强N≡N键。在这项研究中,我们提出了一种由金属有机骨架(MOF) UiO-66-NH2和亚化学计量量氧化钨(W18O49)组成的复合光催化剂。W18O49中的氧空位扩展了其可见光吸收,而UiO-66-NH2提供了高表面积和胺功能化的连接物,增强了光收集。我们合成了不同UiO-66-NH2含量(30%、50%和70%)的UiO-66-NH2/W18O49复合材料,并在可见光照射下评价了它们的光催化性能。50%的UiO-66-NH2/W18O49复合材料NH3产率最高,为420.8 μmol g−1 h−1,是纯UiO-66-NH2的27.2倍,是W18O49的10.9倍。这种增强归因于UiO-66-NH2和W18O49之间的协同异质结,其中MOF提供了大的表面积和高效的光吸收,而W18O49提供了等离子体产生的热电子和丰富的氧空位。该复合材料具有可见光吸收展宽、电荷分离效率高、电荷转移速度快等特点,从而抑制了电子-空穴复合。这些结果突出了UiO-66-NH2/W18O49复合材料作为温和条件下太阳能驱动制氨的有效光催化剂的潜力。
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引用次数: 0
Visualization of Lipid Droplets in Living Cells Using (4-Methoxyphenyl) Ethynyl-Naphthalimide 利用(4-甲氧基苯基)乙基萘酰亚胺可视化活细胞中的脂滴
IF 3 4区 化学 Q3 CHEMISTRY, PHYSICAL Pub Date : 2025-12-12 DOI: 10.1002/cptc.202500329
Quynh Nguyen Nhu Pham, Hong Minh Triet, Mongkol Sukwattanasinitt, Young-Tae Chang, Paitoon Rashatasakhon

Fluorescence sensors provide powerful platforms for real-time monitoring of viscosity due to their high sensitivity, with important implications for microscopic and cellular studies. Lipid droplets, which play central roles in cellular metabolism, represent key targets for such investigations; however, precise approaches for quantifying intracellular viscosity and polarity remain limited. To address this challenge, we developed a series of (4-methoxyphenyl) ethynyl-naphthalimide derivatives tailored for viscosity sensing and live-cell imaging. These fluorophores displayed pronounced fluorescence enhancement, with a linear emission response in glycerol solutions ranging from 60% to 100%, demonstrating high sensitivity to viscosity changes. In addition to favorable photophysical properties, they exhibited excellent biocompatibility and selective accumulation in lipid droplets, enabling real-time visualization of viscosity dynamics in live cells. Among these, probe LD-A showed superior performance: medium-viscosity environments correlated with an increased green-to-blue fluorescence intensity ratio, while high-viscosity conditions induced redshifted emissions, consistent with in vitro solvent studies. Collectively, these results establish LD-A and its analogs as promising fluorescent tools for probing viscosity variations in biological systems with high specificity and sensitivity.

荧光传感器由于其高灵敏度,为实时监测粘度提供了强大的平台,对微观和细胞研究具有重要意义。脂滴在细胞代谢中起着核心作用,是这类研究的关键目标;然而,定量细胞内粘度和极性的精确方法仍然有限。为了解决这一挑战,我们开发了一系列(4-甲氧基苯基)乙基萘酰亚胺衍生物,专门用于粘度传感和活细胞成像。这些荧光团显示出明显的荧光增强,在甘油溶液中具有60%至100%的线性发射响应,显示出对粘度变化的高灵敏度。除了良好的光物理特性外,它们还表现出优异的生物相容性和在脂滴中的选择性积累,从而实现活细胞粘度动力学的实时可视化。其中,探针LD-A表现出优越的性能:中等粘度环境与绿蓝荧光强度比增加相关,而高粘度条件诱导红移发射,与体外溶剂研究一致。总之,这些结果表明LD-A及其类似物具有高特异性和敏感性,是探测生物系统粘度变化的有前途的荧光工具。
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引用次数: 0
Modulating the Favored Emissive State of Functionalized Phenoxazines in Both Solution and the Solid State 在溶液和固态中调制功能化苯恶嗪的有利发射态
IF 3 4区 化学 Q3 CHEMISTRY, PHYSICAL Pub Date : 2025-12-12 DOI: 10.1002/cptc.202500291
Alexander Huber, Lea Höfmann, Sophia Felicitas Stadtfeld, Christoph Wölper, Oleg Prymak, Kenneth E. Maly, Fabio Rizzo, Jens Voskuhl

In this contribution, a set of five differently substituted phenoxazines (POA) derived from a central terephthalonitrile core is investigated. Depending on incorporated electron-donating groups (-NH2, -NMe2, and -OMe) or electron-withdrawing groups (-NO2 and -CN), distinctive luminescent behavior is observed, with preferred emission either in solution, in the solid-state, or in both. An in-depth assessment of the photophysical properties revealed a subtle influence of the substituents on the absorption and emission wavelengths, which correlate with the Hammett parameters, yet a strong sensitivity to the surrounding environment. Hence, solvatochromic response and aggregation studies were conducted to identify the optimal conditions for efficient emission. Absolute photoluminescence quantum yield values of up to 0.47 in tetrachloromethane and 0.33 in the solid state were determined, underscoring the impressive photophysical characteristics of the presented compounds. X-ray diffractometric analyses in combination with Hirshfeld surface evaluation were employed to elucidate the packing effects and their possible relation to the photophysical performance. Finally, density functional theory calculations provided a detailed understanding of the occurring electronic transitions and spatial localization of the natural transition orbitals.

在这一贡献,一组五个不同取代的苯恶嗪(POA)衍生的中心对苯二甲酸腈核心进行了研究。根据加入的给电子基团(-NH2, -NMe2和-OMe)或吸电子基团(-NO2和-CN),观察到不同的发光行为,在溶液中,在固态中,或在两者中都有优先发射。深入的光物理性质评估表明,取代基对吸收和发射波长的影响很小,这与Hammett参数相关,但对周围环境有很强的敏感性。因此,进行了溶剂致变色反应和聚集研究,以确定有效排放的最佳条件。在四氯甲烷和固体状态下的绝对光致发光量子产率分别高达0.47和0.33,强调了所述化合物令人印象深刻的光物理特性。采用x射线衍射分析和Hirshfeld表面评价相结合的方法阐明了填料效应及其与光物理性能的可能关系。最后,密度泛函理论计算提供了发生的电子跃迁和自然跃迁轨道的空间局域化的详细理解。
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引用次数: 0
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ChemPhotoChem
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