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Astrocyte Regulation of Cerebral Blood Flow in Health and Disease. 健康与疾病中星形胶质细胞对脑血流的调节
IF 6.9 2区 生物学 Q1 CELL BIOLOGY Pub Date : 2024-04-01 DOI: 10.1101/cshperspect.a041354
Anusha Mishra, Grant R Gordon, Brian A MacVicar, Eric A Newman

Astrocytes play an important role in controlling microvascular diameter and regulating local cerebral blood flow (CBF) in several physiological and pathological scenarios. Neurotransmitters released from active neurons evoke Ca2+ increases in astrocytes, leading to the release of vasoactive metabolites of arachidonic acid (AA) from astrocyte endfeet. Synthesis of prostaglandin E2 (PGE2) and epoxyeicosatrienoic acids (EETs) dilate blood vessels while 20-hydroxyeicosatetraenoic acid (20-HETE) constricts vessels. The release of K+ from astrocyte endfeet also contributes to vasodilation or constriction in a concentration-dependent manner. Whether astrocytes exert a vasodilation or vasoconstriction depends on the local microenvironment, including the metabolic status, the concentration of Ca2+ reached in the endfoot, and the resting vascular tone. Astrocytes also contribute to the generation of steady-state vascular tone. Tonic release of both 20-HETE and ATP from astrocytes constricts vascular smooth muscle cells, generating vessel tone, whereas tone-dependent elevations in endfoot Ca2+ produce tonic prostaglandin dilators to limit the degree of constriction. Under pathological conditions, including Alzheimer's disease, epilepsy, stroke, and diabetes, disruption of normal astrocyte physiology can compromise the regulation of blood flow, with negative consequences for neurological function.

在多种生理和病理情况下,星形胶质细胞在控制微血管直径和调节局部脑血流量(CBF)方面发挥着重要作用。活跃神经元释放的神经递质会唤起星形胶质细胞中 Ca2+ 的增加,从而导致星形胶质细胞内膜释放血管活性代谢产物花生四烯酸(AA)。前列腺素 E2 (PGE2) 和环二十碳三烯酸 (EET) 的合成会扩张血管,而 20-hydroxyeicosatetraenoic acid (20-HETE) 则会收缩血管。星形胶质细胞内膜释放的 K+ 也会以浓度依赖的方式促进血管扩张或收缩。星形胶质细胞是扩张血管还是收缩血管取决于当地的微环境,包括代谢状态、内足达到的 Ca2+ 浓度以及静息血管张力。星形胶质细胞也有助于产生稳态血管张力。星形胶质细胞会有节奏地释放 20-HETE 和 ATP,使血管平滑肌细胞收缩,从而产生血管张力,而内足 Ca2+ 的张力依赖性升高会产生有节奏的前列腺素扩张剂,从而限制血管收缩的程度。在阿尔茨海默病、癫痫、中风和糖尿病等病理情况下,正常星形胶质细胞生理功能的破坏会影响血流调节,从而对神经功能产生负面影响。
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引用次数: 0
Engineering Crassulacean Acid Metabolism in C3 and C4 Plants. C3 和 C4 植物的纤酸代谢工程。
IF 7.2 2区 生物学 Q1 CELL BIOLOGY Pub Date : 2024-04-01 DOI: 10.1101/cshperspect.a041674
Xiaohan Yang, Yang Liu, Guoliang Yuan, David J Weston, Gerald A Tuskan

Carbon dioxide (CO2) is a major greenhouse gas contributing to changing climatic conditions, which is a grand challenge affecting the security of food, energy, and environment. Photosynthesis plays the central role in plant-based CO2 reduction. Plants performing CAM (crassulacean acid metabolism) photosynthesis have a much higher water use efficiency than those performing C3 or C4 photosynthesis. Therefore, there is a great potential for engineering CAM in C3 or C4 crops to enhance food/biomass production and carbon sequestration on arid, semiarid, abandoned, or marginal lands. Recent progresses in CAM plant genomics and evolution research, along with new advances in plant biotechnology, have provided a solid foundation for bioengineering to convert C3/C4 plants into CAM plants. Here, we first discuss the potential strategies for CAM engineering based on our current understanding of CAM evolution. Then we describe the technical approaches for engineering CAM in C3 and C4 plants, with a focus on an iterative four-step pipeline: (1) designing gene modules, (2) building the gene modules and transforming them into target plants, (3) testing the engineered plants through an integration of molecular biology, biochemistry, metabolism, and physiological approaches, and (4) learning to inform the next round of CAM engineering. Finally, we discuss the challenges and future opportunities for fully realizing the potential of CAM engineering.

二氧化碳(CO2)是导致气候条件变化的主要温室气体,是影响粮食、能源和环境安全的巨大挑战。光合作用在植物减排二氧化碳的过程中发挥着核心作用。与进行 C3 或 C4 光合作用的植物相比,进行 CAM(腐殖酸代谢)光合作用的植物具有更高的水分利用效率。因此,在 C3 或 C4 作物中进行 CAM 工程,以提高干旱、半干旱、荒芜或贫瘠土地上的粮食/生物量生产和碳固存,具有很大的潜力。CAM 植物基因组学和进化研究的最新进展以及植物生物技术的新进展为生物工程将 C3/C4 植物转化为 CAM 植物奠定了坚实的基础。在此,我们首先根据目前对 CAM 进化的理解,讨论了 CAM 工程的潜在策略。然后,我们介绍了在 C3 和 C4 植物中进行 CAM 工程的技术方法,重点是四步迭代流水线:(1) 设计基因模块;(2) 构建基因模块并将其转化为目标植物;(3) 通过整合分子生物学、生物化学、新陈代谢和生理学方法对工程植物进行测试;(4) 通过学习为下一轮 CAM 工程提供信息。最后,我们将讨论充分发挥 CAM 工程潜力所面临的挑战和未来的机遇。
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引用次数: 0
Phospholipase Modulation of Synaptic Membrane Landscape: Driving Force Behind Memory Formation? 磷脂酶对突触膜景观的调节:记忆形成背后的驱动力?
IF 7.2 2区 生物学 Q1 CELL BIOLOGY Pub Date : 2024-04-01 DOI: 10.1101/cshperspect.a041405
Tristan P Wallis, Frédéric A Meunier

The synapse is the communication unit of the brain, linking billions of neurons through trillions of synaptic connections. The lipid landscape of the synaptic membrane underpins neurotransmitter release through the exocytic fusion of neurotransmitter-containing vesicles, endocytic recycling of these synaptic vesicles, and the postsynaptic response following binding of the neurotransmitter to specialized receptors. How the connected brain can learn and acquire memories through synaptic plasticity is unresolved. Phospholipases, and especially the phospholipase A1 isoform DDHD2, have recently been shown to play a critical role in memory acquisition through the generation of saturated free fatty acids such as myristic and palmitic acids. This emerging synaptic plasticity pathway suggests that phospholipases cannot only respond to synaptic activity by altering the phospholipid landscape but also contribute to the establishment of long-term memories in our brain.

突触是大脑的通信单元,通过数万亿个突触连接将数十亿个神经元联系在一起。突触膜的脂质结构通过含神经递质小泡的外细胞融合、这些突触小泡的内细胞再循环以及神经递质与特异受体结合后的突触后反应来支持神经递质的释放。连通的大脑如何通过突触可塑性学习和获得记忆,目前尚无定论。磷脂酶,尤其是磷脂酶 A1 同工型 DDHD2,最近被证明通过生成饱和游离脂肪酸(如肉豆蔻酸和棕榈酸),在记忆获取过程中发挥关键作用。这种新出现的突触可塑性途径表明,磷脂酶不仅能通过改变磷脂结构对突触活动做出反应,而且还有助于在我们的大脑中建立长期记忆。
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引用次数: 0
Genetic Coupling of Mate Recognition Systems in the Genomic Era. 基因组时代配偶识别系统的遗传耦合。
IF 7.2 2区 生物学 Q1 CELL BIOLOGY Pub Date : 2024-04-01 DOI: 10.1101/cshperspect.a041437
Michael G Ritchie, Roger K Butlin

The concept of "genetic coupling" in mate recognition systems arose in the 1960s as a potential mechanism to maintain coordination between signals and receivers during evolutionary divergence. At its most basic it proposed that the same genes might influence trait and preference, and therefore mutations could result in coordinated changes in both traits. Since then, the concept has expanded in scope and is often used to include linkage or genetic correlation between recognition system components. Here we review evidence for genetic coupling, concentrating on proposed examples of a common genetic basis for signals and preferences. Mapping studies have identified several examples of tight genetic linkage between genomic regions influencing signals and preferences, or assortative mating. Whether this extends as far as demonstrating pleiotropy remains a more open question. Some studies, notably of Drosophila, have identified genes in the sex determination pathway and in pheromonal communication where single loci can influence both signals and preferences. This may be based on isoform divergence, in which sex- and tissue-specific effects are facilitated by alternative spicing, or on regulatory divergence. Hence it is not clear that such examples provide compelling evidence of pleiotropy in the sense that "magic mutations" could maintain trait coordination. Rather, coevolution may be facilitated by regulatory divergence but require different mutations or coevolution across isoforms. Reconsidering the logic of genetic coupling, it may be that pleiotropy could actually be less effective than linkage if distinct but associated variants allow molecular coevolution to occur more readily than potentially "unbalanced" mutations in single genes. Genetic manipulation or studies of mutation order effects during divergence are challenging but perhaps the only way to disentangle the role of pleiotropy versus close linkage in coordinated trait divergence.

配偶识别系统中的 "基因耦合 "概念产生于 20 世纪 60 年代,是一种在进化分化过程中保持信号和接收器之间协调的潜在机制。最基本的概念是,相同的基因可能会影响性状和偏好,因此突变可能会导致这两种性状的协调变化。从那时起,这一概念的范围不断扩大,经常被用于识别系统各组成部分之间的联系或遗传相关性。在此,我们回顾了遗传耦合的证据,并集中讨论了信号和偏好具有共同遗传基础的实例。图谱研究发现了几个影响信号和偏好或同种交配的基因组区域之间存在紧密遗传联系的例子。至于这种联系是否会扩展到显示多效性,这仍然是一个悬而未决的问题。一些研究,特别是对果蝇的研究,发现在性别决定途径和信息素交流中,单个基因位点可以同时影响信号和偏好。这可能是基于异构体的分化,在这种分化中,性别和组织特异性效应通过替代性加糖而得到促进,也可能是基于调控分化。因此,从 "神奇的突变 "可以维持性状协调的意义上来说,这些例子并没有提供令人信服的多效性证据。相反,共同进化可能是由调控分歧促进的,但需要不同的突变或不同同工酶的共同进化。重新考虑遗传耦合的逻辑,如果不同但相关的变异比单个基因中潜在的 "不平衡 "突变更容易使分子共同进化发生,那么多效性实际上可能不如关联性有效。遗传操作或对分化过程中突变顺序效应的研究具有挑战性,但也许是区分多效性与紧密连锁在协调性状分化中的作用的唯一方法。
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引用次数: 0
How Does Selfing Affect the Pace and Process of Speciation? 自交如何影响物种演化的速度和过程?
IF 7.2 2区 生物学 Q1 CELL BIOLOGY Pub Date : 2024-03-19 DOI: 10.1101/cshperspect.a041426
Lucas Marie-Orleach, Sylvain Glémin, Marie K. Brandrud, Anne K. Brysting, Abel Gizaw, A. Lovisa S. Gustafsson, Loren H. Rieseberg, Christian Brochmann, Siri Birkeland
Surprisingly little attention has been given to the impact of selfing on speciation, even though selfing reduces gene flow between populations and affects other key population genetics parameters. Here we review recent theoretical work and compile empirical data from crossing experiments and genomic and phylogenetic studies to assess the effect of mating systems on the speciation process. In accordance with theoretical predictions, we find that accumulation of hybrid incompatibilities seems to be accelerated in selfers, but there is so far limited empirical support for a predicted bias toward underdominant loci. Phylogenetic evidence is scarce and contradictory, including studies suggesting that selfing either promotes or hampers speciation rate. Further studies are therefore required, which in addition to measures of reproductive barrier strength and selfing rate should routinely include estimates of demographic history and genetic divergence as a proxy for divergence time.
令人惊讶的是,尽管自交会减少种群间的基因流动并影响其他关键种群遗传学参数,但人们却很少关注自交对物种形成的影响。在此,我们回顾了最近的理论研究,并汇编了杂交实验、基因组和系统发育研究的经验数据,以评估交配系统对物种演化过程的影响。根据理论预测,我们发现杂交不兼容性的积累似乎会在自交系中加速,但迄今为止,对预测的偏向低优势位点的经验支持有限。系统发育的证据很少,而且相互矛盾,包括有研究表明自交促进或阻碍物种的形成。因此,还需要进一步的研究,除了生殖障碍强度和自交率的测量方法外,还应该包括对人口历史和遗传分化的估计,作为分化时间的代表。
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引用次数: 0
Regulators of Oligodendrocyte Differentiation 少突胶质细胞分化的调节因子
IF 7.2 2区 生物学 Q1 CELL BIOLOGY Pub Date : 2024-03-19 DOI: 10.1101/cshperspect.a041358
Ben Emery, Teresa L. Wood
Myelination has evolved as a mechanism to ensure fast and efficient propagation of nerve impulses along axons. Within the central nervous system (CNS), myelination is carried out by highly specialized glial cells, oligodendrocytes. The formation of myelin is a prolonged aspect of CNS development that occurs well into adulthood in humans, continuing throughout life in response to injury or as a component of neuroplasticity. The timing of myelination is tightly tied to the generation of oligodendrocytes through the differentiation of their committed progenitors, oligodendrocyte precursor cells (OPCs), which reside throughout the developing and adult CNS. In this article, we summarize our current understanding of some of the signals and pathways that regulate the differentiation of OPCs, and thus the myelination of CNS axons.
髓鞘化是一种确保神经冲动沿着轴突快速有效传播的进化机制。在中枢神经系统(CNS)中,髓鞘化是由高度特化的神经胶质细胞--少突胶质细胞完成的。髓鞘的形成是中枢神经系统发育过程中一个漫长的环节,在人类成年后仍会继续进行,以应对损伤或作为神经可塑性的一个组成部分。髓鞘形成的时间与少突胶质细胞的产生密切相关,少突胶质细胞的祖细胞--少突胶质细胞前体细胞(OPCs)的分化贯穿整个发育中和成年的中枢神经系统。在这篇文章中,我们总结了目前对调控少突胶质细胞前体细胞分化并进而调控中枢神经系统轴突髓鞘化的一些信号和途径的理解。
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引用次数: 0
Schwann Cell Development and Myelination 许旺细胞的发育和髓鞘化
IF 7.2 2区 生物学 Q1 CELL BIOLOGY Pub Date : 2024-03-19 DOI: 10.1101/cshperspect.a041360
James Salzer, M. Laura Feltri, Claire Jacob
Glial cells in the peripheral nervous system (PNS), which arise from the neural crest, include axon-associated Schwann cells (SCs) in nerves, synapse-associated SCs at the neuromuscular junction, enteric glia, perikaryon-associated satellite cells in ganglia, and boundary cap cells at the border between the central nervous system (CNS) and the PNS. Here, we focus on axon-associated SCs. These SCs progress through a series of formative stages, which culminate in the generation of myelinating SCs that wrap large-caliber axons and of nonmyelinating (Remak) SCs that enclose multiple, small-caliber axons. In this work, we describe SC development, extrinsic signals from the axon and extracellular matrix (ECM) and the intracellular signaling pathways they activate that regulate SC development, and the morphogenesis and organization of myelinating SCs and the myelin sheath. We review the impact of SCs on the biology and integrity of axons and their emerging role in regulating peripheral nerve architecture. Finally, we explain how transcription and epigenetic factors control and fine-tune SC development and myelination.
外周神经系统(PNS)中的神经胶质细胞来自神经嵴,包括神经中与轴突相关的许旺细胞(SCs)、神经肌肉接头处与突触相关的SCs、肠胶质细胞、神经节中与核周相关的卫星细胞以及中枢神经系统(CNS)和外周神经系统(PNS)交界处的边界帽细胞。在这里,我们重点讨论轴突相关卫星细胞。这些SC经过一系列形成阶段,最终生成包裹大口径轴突的髓鞘SC和包裹多条小口径轴突的非髓鞘(Remak)SC。在这项研究中,我们描述了SC的发育、来自轴突和细胞外基质(ECM)的外在信号及其激活的调控SC发育的细胞内信号通路,以及髓鞘化SC和髓鞘的形态发生和组织。我们回顾了 SC 对轴突生物学和完整性的影响,以及 SC 在调节周围神经结构中的新作用。最后,我们解释了转录和表观遗传因子如何控制和微调 SC 的发育和髓鞘化。
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引用次数: 0
How Important Is Variation in Extrinsic Reproductive Isolation to the Process of Speciation? 外在生殖隔离的变异对物种演化过程有多重要?
IF 7.2 2区 生物学 Q1 CELL BIOLOGY Pub Date : 2024-03-19 DOI: 10.1101/cshperspect.a041430
Linyi Zhang, Etsuko Nonaka, Megan Higgie, Scott Egan
The strength of reproductive isolation (RI) between two or more lineages during the process of speciation can vary by the ecological conditions. However, most speciation research has been limited to studying how ecologically dependent RI varies among a handful of broadly categorized environments. Very few studies consider the variability of RI and its effects on speciation at finer scales—that is, within each environment due to spatial or temporal environmental heterogeneity. Such variation in RI across time and/or space may inhibit speciation through leaky reproductive barriers or promote speciation by facilitating reinforcement. To investigate this overlooked aspect of speciation research, we conducted a literature review of existing studies of variation in RI in the field and then conducted individual-based simulations to examine how variation in hybrid fitness across time and space affects the degree of gene flow. Our simulations indicate that the presence of variation in hybrid fitness across space and time often leads to an increase in gene flow compared to scenarios where hybrid fitness remains static. This observation can be attributed to the convex relationship between the degree of gene flow and the strength of selection on hybrids. Our simulations also show that the effect of variation in RI on facilitating gene flow is most pronounced when RI, on average, is relatively low. This finding suggests that it could serve as an important mechanism to explain why the completion of speciation is often challenging. While direct empirical evidence documenting variation in extrinsic RI is limited, we contend that it is a prevalent yet underexplored phenomenon. We support this argument by proposing common scenarios in which RI is likely to exhibit variability and thus influence the process of speciation.
在物种演化过程中,两个或多个品系之间的生殖隔离(RI)强度会因生态条件而异。然而,大多数物种演化研究都局限于研究生态依赖性 RI 在少数几个大类环境中的变化情况。很少有研究在更细的尺度上考虑 RI 的变化及其对物种演化的影响,也就是说,在每个环境中,由于空间或时间上的环境异质性,RI 的变化及其对物种演化的影响。RI在时间和/或空间上的这种变化可能会通过繁殖障碍的泄漏抑制物种的演化,也可能会通过强化促进物种的演化。为了探究物种演化研究中这一被忽视的方面,我们对现有的野外 RI 变异研究进行了文献综述,然后进行了基于个体的模拟,以研究不同时间和空间的杂交适应性差异如何影响基因流动的程度。我们的模拟结果表明,与杂种优势保持不变的情况相比,杂种优势在不同时空的变化往往会导致基因流的增加。这一现象可归因于基因流动程度与杂交种选择强度之间的凸性关系。我们的模拟还表明,当 RI 平均值相对较低时,RI 的变化对促进基因流动的影响最为明显。这一发现表明,它可以作为一种重要机制来解释为什么完成物种分化往往具有挑战性。虽然记录外在 RI 变异的直接经验证据有限,但我们认为这是一个普遍存在但尚未得到充分探索的现象。为了支持这一论点,我们提出了一些常见的情景,在这些情景中,RI 有可能表现出变异性,从而影响物种的演化过程。
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引用次数: 0
Negative Coupling: The Coincidence of Premating Isolating Barriers Can Reduce Reproductive Isolation 负耦合:预产期隔离障碍的巧合可以减少生殖隔离
IF 7.2 2区 生物学 Q1 CELL BIOLOGY Pub Date : 2024-03-19 DOI: 10.1101/cshperspect.a041435
Thomas G. Aubier, Michael Kopp, Isaac J. Linn, Oscar Puebla, Marina Rafajlović, Maria R. Servedio
Speciation can be mediated by a variety of reproductive barriers, and the interaction among different barriers has often been shown to enhance overall reproductive isolation, a process referred to as “coupling.” Here, we analyze a population genetics model to study the establishment of linkage disequilibrium (LD) among loci involved in multiple premating barriers, an aspect that has received little theoretical attention to date. We consider a simple genetic framework underlying two distinct premating barriers, each encoded by a preference locus and its associated mating trait locus. We show that their interaction can lead to a decrease in overall reproductive isolation relative to a situation with a single barrier, a process we call “negative coupling.” More specifically, in our model, negative coupling results either from sexual selection that reduces divergence at all loci, or from reduced LD that occurs because the presence of many females with “mismatched” preferences causes the mating success of recombinant males to become high. Interestingly, the latter effect may even cause LD among preference loci to become negative when recombination rates among loci are low. We conclude that coincident reproductive barriers may not necessarily reinforce each other, and that the underlying loci may not necessarily develop a positive association.
物种分化可由多种生殖障碍促成,而不同障碍之间的相互作用往往被证明会加强整体的生殖隔离,这一过程被称为 "耦合"。在这里,我们分析了一个种群遗传学模型,以研究涉及多重交配前障碍的位点之间的连锁不平衡(LD)的建立,迄今为止,这方面的理论关注还很少。我们考虑了一个简单的遗传学框架,其中包含两个不同的交配前障碍,每个障碍由一个偏好基因座及其相关的交配性状基因座编码。我们的研究表明,相对于只有单一障碍的情况,它们之间的相互作用会导致整体生殖隔离的降低,我们将这一过程称为 "负耦合"。更具体地说,在我们的模型中,负耦合要么是由于性选择降低了所有位点上的差异,要么是由于许多具有 "不匹配 "偏好的雌性的存在导致重组雄性的交配成功率变得很高,从而降低了LD。有趣的是,当基因位点间的重组率较低时,后一种效应甚至可能导致偏好基因位点间的LD变为负值。我们的结论是,重合的生殖障碍不一定会相互加强,而且相关基因位点也不一定会形成正相关。
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引用次数: 0
Combining Molecular, Macroevolutionary, and Macroecological Perspectives on the Generation of Diversity 结合分子、宏观进化和宏观生态学视角看多样性的产生
IF 7.2 2区 生物学 Q1 CELL BIOLOGY Pub Date : 2024-03-19 DOI: 10.1101/cshperspect.a041453
Lindell Bromham
Charles Darwin presented a unified process of diversification driven by the gradual accumulation of heritable variation. The growth in DNA databases and the increase in genomic sequencing, combined with advances in molecular phylogenetic analyses, gives us an opportunity to realize Darwin's vision, connecting the generation of variation to the diversification of lineages. The rate of molecular evolution is correlated with the rate of diversification across animals and plants, but the relationship between genome change and speciation is complex: Mutation rates evolve in response to life history and niche; substitution rates are influenced by mutation, selection, and population size; rates of acquisition of reproductive isolation vary between populations; and traits, niches, and distribution can influence diversification rates. The connection between mutation rate and diversification rate is one part of the complex and varied story of speciation, which has theoretical importance for understanding the generation of biodiversity and also practical impacts on the use of DNA to understand the dynamics of speciation over macroevolutionary timescales.
查尔斯-达尔文(Charles Darwin)提出了一个由可遗传变异的逐渐积累驱动的统一的多样化过程。DNA 数据库的增长和基因组测序的增加,再加上分子系统发育分析的进步,使我们有机会实现达尔文的愿景,将变异的产生与品系的多样化联系起来。分子进化的速度与动物和植物的多样化速度相关,但基因组变化与物种分化之间的关系非常复杂:突变率随生活史和生态位的变化而变化;替代率受突变、选择和种群规模的影响;不同种群获得生殖隔离的速度不同;性状、生态位和分布也会影响多样化速度。突变率与多样化率之间的联系是复杂多变的物种演化过程的一部分,对理解生物多样性的产生具有重要的理论意义,同时也对利用 DNA 理解宏观进化时间尺度上物种演化的动态具有实际影响。
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引用次数: 0
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