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Crystallographic patterns in nature and Turkish art 自然界和土耳其艺术中的晶体图案
Pub Date : 2003-12-01 DOI: 10.1016/j.cryseng.2004.03.001
Hacali Necefoglu

In this paper, crystallographic aspects of ancient, medieval and modern Turkish ornaments are dealt with. Crystallographic patterns (CPs) are considerably different from other patterns. The following are characteristic of CPs: the edge of ornament elements draws the edge of the figure; maximal compactness of the ornament elements; lack of background or transformation of background to ornament elements; minimization of the variety of ornament elements; symmetry is not used for form creation. In the process of the construction of CPs, symmetry appears as a result of combination, not as a means of its formation that is characteristic of other ornaments. Their symmetries are analogous to symmetries of natural objects. The atoms and molecules dispose themselves in crystals just as elements arrange themselves in CPs. In other words, CPs are constructed according to the same principles of crystal formation, i.e. the principle of tight packing. The similarity (isomorphism) of crystals and ornaments enables us to describe the ornaments with structural analysis terms, and the similarity between ornaments and crystal structures can be also used in chemistry education. This will bring an aesthetical aspect to education. An invisible part of nature can be studied as ornament creation. Each newly created CP is the structural scheme of a number of possible compounds. The familiarity with such ornaments and the ability to create them are important for solving compound structures. Similarity of patterns with some crystal structures enables us to reach the following conclusions: mankind may make use of the principles from which nature was created, and he may achieve a resemblance to the creation of nature in ideal; mankind may create nothing whose prototype does not exist in nature.

在本文中,晶体学方面的古代,中世纪和现代土耳其饰品处理。晶体学模式(CPs)与其他模式有很大的不同。CPs的特点如下:装饰元素的边缘绘制图形的边缘;装饰元素的最大紧凑性;缺乏背景或将背景转化为装饰元素;尽量减少装饰元素的多样性;窗体创建不使用对称。在CPs的构造过程中,对称是一种组合的结果,而不是像其他装饰那样作为一种形成的手段。它们的对称性类似于自然物的对称性。原子和分子在晶体中排列,就像元素在cp中排列一样。换句话说,CPs是根据相同的晶体形成原理构建的,即紧密堆积原理。晶体与装饰物的相似性(同构性)使我们能够用结构分析术语来描述装饰物,装饰物与晶体结构的相似性也可以用于化学教育。这将给教育带来美学的一面。自然中不可见的部分可以作为装饰创作来研究。每个新创建的CP都是一些可能化合物的结构方案。熟悉这种装饰和创造它们的能力对于解决复合结构非常重要。图案与某些晶体结构的相似性使我们能够得出以下结论:人类可以利用创造自然的原理,他可以在理想中实现与自然创造的相似性;人类不能创造出自然界中没有原型的东西。
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引用次数: 9
Number patterns in Nature 自然界中的数字模式
Pub Date : 2003-12-01 DOI: 10.1016/j.cryseng.2003.11.004
Jan C.A. Boeyens

Fibonacci phyllotaxis is one of many examples that demonstrate the relationship of biological growth patterns with the golden mean and self-similar symmetry, also observed in scale–rotational crystal growth. An equivalent relationship of natural-number patterns with the structure and periodicity of atomic matter is demonstrated. A generalized, closed periodic law that reveals the hidden symmetry in the periodicity of atomic matter is derived and related to the variability of electronic configuration of atoms, as a function of thermodynamic conditions, to nuclear synthesis and to the DNA code. Implications on space-time structure are discussed.

斐波那契叶根性是证明生物生长模式与黄金中庸和自相似对称性之间关系的许多例子之一,在尺度旋转晶体生长中也观察到。证明了自然数模式与原子物质的结构和周期性的等价关系。一个广义的、封闭的周期定律揭示了原子物质周期性中隐藏的对称性,并与原子的电子构型的可变性有关,作为热力学条件的函数,与核合成和DNA密码有关。讨论了对时空结构的影响。
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引用次数: 8
Raman analysis of red-brown and gray shards from 16th and 17th century Portuguese shipwrecks 对16和17世纪葡萄牙沉船上的红棕色和灰色碎片进行拉曼分析
Pub Date : 2003-12-01 DOI: 10.1016/j.cryseng.2004.04.005
M.A. Legodi, D. de Waal

The artifacts under investigation (three red clay shards, two gray clay shards and a red clay teapot) are from the J A Van Tilburg museum at the University of Pretoria (UP). The large red clay shard was recovered from the 1552 Portuguese shipwreck, São João, found in the region of Port Edward, South Africa. The other shards were recovered from the 1622 Portuguese shipwreck, the São João Baptista, which sank around Kenton-on-sea off the South African coast. The results from these are compared to those obtained from the analysis of a red-brown teapot. The oldest of this type of teapot was made in China during the second half of the 18th century. Raman spectroscopy has proven to be a useful tool for qualitative determination of the composition of these clay artifacts. The red clays were characterized by the presence of hematite, kaolin, quartz, amorphous carbon and aluminosilicates. The results of the clay teapot differed from those of red clay shards in that no quartz Raman bands were observed for the clay teapot. The gray clay shards were characterized mainly by the presence of quartz, kaolin, amorphous carbon and aluminosilicates. The presence of mullite in all samples could not be ascertained unambiguously using Raman spectroscopy. The pigments found in the investigated samples are hematite (α-Fe2O3) (for red samples) and amorphous carbon (for both red and gray samples).

正在调查的文物(三个红色粘土碎片,两个灰色粘土碎片和一个红色粘土茶壶)来自比勒陀利亚大学(UP)的J a Van Tilburg博物馆。这块巨大的红色粘土碎片是从1552年在南非爱德华港地区发现的葡萄牙沉船 o jo号上找到的。其他的碎片是从1622年的葡萄牙沉船—— o jo o巴普蒂斯塔号上找到的,这艘船在南非肯顿附近沉没。将这些结果与红棕色茶壶的分析结果进行了比较。这种类型的最古老的茶壶是在18世纪下半叶在中国制造的。拉曼光谱已被证明是一个有用的工具,定性确定这些粘土文物的组成。红粘土的主要成分为赤铁矿、高岭土、石英、无定形碳和硅铝酸盐。粘土茶壶的结果与红粘土碎片的结果不同,粘土茶壶没有观察到石英拉曼带。灰色粘土碎屑的主要特征是石英、高岭土、无定形碳和铝硅酸盐。所有样品中莫来石的存在都不能用拉曼光谱明确地确定。在所研究的样品中发现的颜料是赤铁矿(α-Fe2O3)(用于红色样品)和无定形碳(用于红色和灰色样品)。
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引用次数: 13
Number patterns in crystallography 晶体学中的数字模式
Pub Date : 2003-12-01 DOI: 10.1016/j.cryseng.2004.04.003
John S. Rutherford

Although the number patterns generated by the integer solutions of equations such ash2+k2+l2=nare of fundamental importance in crystallography, little work has been done to apply number theory, perhaps the most famous and fundamental area of mathematics, to problems involving the three-dimensional lattices on which crystal structures are based. The relevance of the work of such giants as Euler, Riemann, Dirichlet and Erdos to some crystallographic questions are discussed.

虽然由ash2+k2+l2=等方程的整数解生成的数字模式在晶体学中具有重要的基础意义,但将数论(也许是数学中最著名和最基础的领域)应用于涉及晶体结构所基于的三维晶格的问题的工作却很少。讨论了欧拉、黎曼、狄利克雷和埃尔多斯等巨人的工作与某些晶体学问题的相关性。
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引用次数: 0
High-pressure-induced structural changes in molecular crystals preserving the space group symmetry: anisotropic distortion/isosymmetric polymorphism 保持空间群对称性的高压诱导分子晶体结构变化:各向异性畸变/等对称多态
Pub Date : 2003-12-01 DOI: 10.1016/j.cryseng.2003.11.005
Elena V. Boldyreva

Pressure-induced structural changes in molecular crystals that are not accompanied by a change in space group symmetry are considered. Anisotropic structural strain of the same polymorph and isosymmetric polymorphic transition are two possibilities which are illustrated in the examples of Co(III)nitropentaammine chloride, the monoclinic and ortho rhombic polymorphs of paracetamol, the α- and γ-polymorphs of glycine, benzoquinone (anisotropic structural strain) and sodium oxalate (isosymmetric polymorphic transition). The experiments described were carried out in diamond anvil cells, and the structural changes were monitored by X-ray powder and single crystal X-ray diffraction, and IR and Raman spectroscopy.

考虑了分子晶体中不伴有空间群对称变化的压力引起的结构变化。相同多晶型的各向异性结构应变和等对称多晶型转变是两种可能性,例如Co(III)硝基五胺氯化物、扑热息痛的单斜和正方正多晶型、甘氨酸、苯醌的α-和γ-多晶型(各向异性结构应变)和草酸钠的等对称多晶型转变。所述实验在金刚石砧细胞中进行,并通过x射线粉末和单晶x射线衍射,红外和拉曼光谱监测结构变化。
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引用次数: 89
Crystallographic excursion in superspace 超空间中的晶体偏移
Pub Date : 2003-12-01 DOI: 10.1016/j.cryseng.2004.04.001
Gervais Chapuis

After studying more than 100 different samples of calaverite Au1-pAgpTe2 (p < 0.15) three famous mineralogists declared in a well documented 1931 publication the invalidity of the law of rational indices. What could lead them to draw such an extreme conclusion from the observation law of Hauÿ dating from more than two centuries? Their observations remained unexplained for the next forty years. In the 1970's, the room temperature structure of γ-Na2CO3 resisted any attempt for a precise structural analysis. The appearance of satellite reflections was noted on single crystal diffractograms which led to the generalisation of the concept of crystal. This generalisation consisted in using at least four integers to fully characterise each individual diffractions peaks. The theory of periodic crystals in space of higher dimension, i.e. the superspace was then developed to deal with the new experimental observations. Later, a new class of materials called composite crystals and still later, the discovery of quasicrystals only reinforced the validity of the superspace concept to describe any material requiring more than three integers to index their diffraction pattern.

What is the essence of superspace to describe crystalline structures? Any crystal structure requesting more than three integers to index its diffraction pattern can be described as a periodic object in superspace with dimension equal to the number of required integer. The structure observed in our real word is a three dimensional cut of the superspace description. In general this cut is irrational and consequently the crystal is aperiodic. Calaverite and γ-Na2CO3 are examples of aperiodic crystals which includes incommensurately modulated crystals, composite and quasi-crystals. Rational cuts are also possible. In this case, the structure is periodic and is usually called a superstructure.

在研究了100多个不同的钙钙石样品(Au1-pAgpTe2 (p <1931年,三位著名的矿物学家在一篇文献翔实的出版物中宣称,有理指数定律是无效的。是什么让他们从两个多世纪以来的豪乌观测定律中得出如此极端的结论呢?在接下来的四十年里,他们的观察结果一直无法解释。在20世纪70年代,γ-Na2CO3的室温结构抵制了任何精确结构分析的尝试。在单晶衍射图上注意到卫星反射的出现,这导致了晶体概念的推广。这种概括包括使用至少四个整数来充分表征每个单独的衍射峰。在高维空间(即超空间)中发展了周期晶体理论来处理新的实验观测。后来,一类新的材料被称为复合晶体,再后来,准晶体的发现只是加强了超空间概念的有效性,以描述任何需要超过三个整数来索引其衍射模式的材料。描述晶体结构的超空间本质是什么?任何需要三个以上整数来索引其衍射图样的晶体结构都可以描述为维度等于所需整数数的超空间周期对象。在我们的现实世界中观察到的结构是超空间描述的三维切割。一般来说,这种切割是不合理的,因此晶体是非周期性的。钙钙石和γ-Na2CO3是非周期晶体,包括非相应调制晶体、复合晶体和准晶体。合理的削减也是可能的。在这种情况下,结构是周期性的,通常被称为上层结构。
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引用次数: 11
The Mirror of Galadriel: looking at chiral and achiral crystal structures 凯兰崔尔之镜:观察手性和非手性晶体结构
Pub Date : 2003-12-01 DOI: 10.1016/j.cryseng.2003.10.001
H.D. Flack, G. Bernardinelli

Illustrative examples are provided of infrequent situations arising in the chiral or achiral crystal structures formed of chiral or achiral molecules. For absolute-configuration determination by way of structure analysis, it is demonstrated how powerful characterization of enantiomers by way of CD spectra and enantioselective chromatography can be when working on the single crystal used in the diffraction analysis. Common misunderstandings in the description of non-centrosymmetric achiral crystal structures are clarified. Further attention is given to questions of nomenclature.

提供了由手性或非手性分子形成的手性或非手性晶体结构中出现的罕见情况的说明性示例。对于通过结构分析确定绝对构型的方法,证明了在衍射分析中使用单晶时,通过CD光谱和对映体选择色谱法可以对对映体进行强大的表征。澄清了在描述非中心对称非手性晶体结构时常见的误解。进一步注意的问题是命名法。
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引用次数: 24
Structure correlation in bispidine coordination compounds—isomerism and tuneable reactivity 比必定配位化合物的结构相关性——同分异构和可调反应性
Pub Date : 2003-12-01 DOI: 10.1016/j.cryseng.2004.04.002
Peter Comba, Marion Kerscher

The published structural data of pseudo-square-pyramidal and pseudo-octahedral transition metal complexes with tetra- and pentadentate bispidine ligands (2,4-, 2,3,4- and 2,4,7-substituted 3,7-diazabicyclo[3.3.1]nonane, pyridine or 6-methylpyridine substituents), primarily with copper(I), copper(II) and iron(II) is reviewed, together with few molecular mechanics and DFT calculations, and in the light of the specific and uncommon molecular properties of bispidine coordination compounds. One of the main features is that, while the ligands are very rigid, there is a high degree of elasticity of the coordination geometries. That is, the potential energy surfaces of the complexes are flat; in addition, there are various shallow minima, and this leads to uncommon types of isomerism. These structural features, the emerging reactivities and possibilities to tune them are discussed in detail.

本文综述了以铜(I)、铜(II)和铁(II)为主的四齿和五齿比斯匹啶配体(2,4-、2,3,4-和2,4,7取代的3,7-重氮杂环[3.3.1]壬烷、吡啶或6-甲基吡啶取代基)的伪方-金字塔和伪八面体过渡金属配合物的已发表结构数据,并结合比斯匹啶配位化合物的特殊和不常见的分子性质,进行了一些分子力学和DFT计算。其中一个主要特点是,虽然配体是非常刚性的,但配位几何具有高度的弹性。即配合物的势能面是平坦的;此外,还存在各种浅极小值,这导致了不常见的同分异构类型。详细讨论了这些结构特征、新出现的反应性和调整它们的可能性。
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引用次数: 15
Aspects of breaking of symmetry through vibrational motions 通过振动运动打破对称性的方面
Pub Date : 2003-12-01 DOI: 10.1016/j.cryseng.2004.02.002
J.F. Ogilvie

Varied aspects of breaking of symmetry in crystalline and molecular conditions are considered. Distributions of electronic density about atomic centres of Li and H in crystalline LiH and isolated diatomic molecules of that compound en route to dissociation are discussed in relation to symmetry.

考虑了晶体和分子条件下对称性破坏的各个方面。本文从对称性的角度讨论了锂离子晶体中锂和氢原子中心的电子密度分布,以及该化合物在解离过程中的孤立双原子分子。
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引用次数: 1
An ab initio study of the properties of some hydride dimers 一些氢化物二聚体性质的从头算研究
Pub Date : 2003-12-01 DOI: 10.1016/j.cryseng.2004.04.004
M.G. Govender , S.M. Rootman, T.A. Ford

The properties of the homodimers of the covalent hydrides of the elements from lithium to fluorine and from sodium to chlorine have been computed by means of ab initio molecular orbital theory. These properties show some interesting discontinuities, illustrating the significant differences between the natures of the dimers of the hydrides of the metals and metalloids of groups 1–3, and those of the electronegative non-metals of groups 5–7. The dimers of the group 1–3 hydrides are very strongly bound, featuring two bridging hydrogen atoms per dimer molecule, in structures similar to that of the well-known diborane species. Those of the hydrides of groups 6 and 7 are stabilized by conventional, almost linear, hydrogen bonds. The same is true of the ammonia dimer, but that of phosphine contains two equivalent pairs of bridging hydrogen atoms in a very weakly bound, doubly bifurcated hydrogen-bonded aggregate. The methane and silane dimers are found to be barely bound at all.

用从头算分子轨道理论计算了从锂到氟和从钠到氯的共价氢化物同二聚体的性质。这些性质显示出一些有趣的不连续性,说明了1-3基团的金属和类金属的氢化物的二聚体与5-7基团的电负性非金属的二聚体的性质之间的显著差异。基团1-3氢化物的二聚体结合非常紧密,每个二聚体分子具有两个桥接氢原子,其结构类似于众所周知的二硼烷类。第6和第7基团的氢化物是由传统的、几乎是线性的氢键稳定的。氨二聚体也是如此,但磷化氢的二聚体包含两对相等的桥接氢原子,在一个非常弱的键合,双分叉的氢键聚集体中。发现甲烷和硅烷二聚体几乎没有结合。
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引用次数: 5
期刊
Crystal Engineering
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