Pub Date : 2003-06-01DOI: 10.1016/S1463-0184(03)00070-4
Roberto Centore, Angela Tuzi
X-ray structures of four substituted azobenzene-carboxylic acids have been determined. The crystal packing of the compounds has been analyzed in terms of three main features: parallel placement of the long molecular axes, lateral contacts of (offset) face to face and face to edge types among aromatic rings and hydrogen bonding between carboxy and/or alcoholic hydroxy groups. Hydrogen bonding patterns of the dimer, catemer and expanded dimer types have been found, as well as supramolecular architectures such as chains, rows, sheets and networks.
{"title":"Hydrogen bonding patterns and crystal packing in azobenzene-carboxylic acids","authors":"Roberto Centore, Angela Tuzi","doi":"10.1016/S1463-0184(03)00070-4","DOIUrl":"https://doi.org/10.1016/S1463-0184(03)00070-4","url":null,"abstract":"<div><p>X-ray structures of four substituted azobenzene-carboxylic acids have been determined. The crystal packing of the compounds has been analyzed in terms of three main features: parallel placement of the long molecular axes, lateral contacts of (offset) face to face and face to edge types among aromatic rings<span> and hydrogen bonding between carboxy and/or alcoholic hydroxy groups. Hydrogen bonding patterns of the dimer, catemer and expanded dimer types have been found, as well as supramolecular architectures such as chains, rows, sheets and networks.</span></p></div>","PeriodicalId":10766,"journal":{"name":"Crystal Engineering","volume":"6 2","pages":"Pages 87-97"},"PeriodicalIF":0.0,"publicationDate":"2003-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1016/S1463-0184(03)00070-4","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"91737502","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2003-03-01DOI: 10.1016/S1463-0184(03)00046-7
G.L. Pakhomov, Yu.N. Drozdov
Thin vacuum sublimed films composed of planar metallophthalocyanines in various proportions have been studied by means of X-ray diffraction. Formation of stable solid solution is proposed from experimental data.
用x射线衍射研究了由不同比例的平面金属酞菁组成的真空升华薄膜。根据实验数据提出了稳定固溶体的形成。
{"title":"Mixed crystal phthalocyanine films","authors":"G.L. Pakhomov, Yu.N. Drozdov","doi":"10.1016/S1463-0184(03)00046-7","DOIUrl":"10.1016/S1463-0184(03)00046-7","url":null,"abstract":"<div><p>Thin vacuum sublimed films composed of planar metallophthalocyanines in various proportions have been studied by means of X-ray diffraction. Formation of stable solid solution is proposed from experimental data.</p></div>","PeriodicalId":10766,"journal":{"name":"Crystal Engineering","volume":"6 1","pages":"Pages 23-29"},"PeriodicalIF":0.0,"publicationDate":"2003-03-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1016/S1463-0184(03)00046-7","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"82076347","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2003-03-01DOI: 10.1016/S1463-0184(03)00045-5
A. Zakrassov, M. Kaftory
The hybrid density functional/Hartree-Fock methods (DF/HF) UB3LYP and UB1LYP with 6–31 G(d) basis set have been applied to the atomic spin densities and isotropic hyperfine coupling constants (hfcc’s) calculations of the NS, ONS, NN and NO bridged radicals. The calculated hfcc’s are in a good agreement with the experimental values. The results are explained in terms of the molecular geometries and the influence of the substituents.
{"title":"The hybrid DF/HF calculations for the NS, NO, NN and ONS bridged radicals","authors":"A. Zakrassov, M. Kaftory","doi":"10.1016/S1463-0184(03)00045-5","DOIUrl":"10.1016/S1463-0184(03)00045-5","url":null,"abstract":"<div><p><span>The hybrid density functional/Hartree-Fock methods (DF/HF) UB3LYP and UB1LYP with 6–31 G(d) basis set have been applied to the atomic spin densities and isotropic hyperfine coupling constants (hfcc’s) calculations of the NS, ONS, NN and NO bridged radicals. The calculated hfcc’s are in a good agreement with the experimental values. The results are explained in terms of the </span>molecular geometries and the influence of the substituents.</p></div>","PeriodicalId":10766,"journal":{"name":"Crystal Engineering","volume":"6 1","pages":"Pages 31-42"},"PeriodicalIF":0.0,"publicationDate":"2003-03-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1016/S1463-0184(03)00045-5","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"90831996","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2003-03-01DOI: 10.1016/S1463-0184(02)00022-9
H. Nowell , N. Shan , J.P. Attfield , W. Jones , W.D.S. Motherwell
The previously unknown crystal structure of cyclohexane-1, 3cis, 5cis-tricarboxylic acid (CTA) has been solved from laboratory X-ray powder diffraction data using a simulated annealing algorithm followed by restrained Rietveld refinement (reduced-χ2=8.531 for the refined crystal structure). The structure is triclinic Five out of six of the CO2H groups in the asymmetric unit form R22(8) hydrogen bond motifs with neighbouring CO2H groups. The motifs connect molecules to form pseudo-hexagonal, ten-molecule rings that fuse into supramolecular buckled honeycomb sheets, which stack and are linked by O–H⋯O hydrogen bonds.
{"title":"The structure of cyclohexane-1, 3cis, 5cis-tricarboxylic acid, determined from powder X-ray diffraction data","authors":"H. Nowell , N. Shan , J.P. Attfield , W. Jones , W.D.S. Motherwell","doi":"10.1016/S1463-0184(02)00022-9","DOIUrl":"10.1016/S1463-0184(02)00022-9","url":null,"abstract":"<div><p>The previously unknown crystal structure of cyclohexane-1, 3<em>cis</em>, 5<em>cis</em>-tricarboxylic acid (CTA) has been solved from laboratory X-ray powder diffraction data using a simulated annealing algorithm followed by restrained Rietveld refinement (reduced-<em>χ</em><sup>2</sup>=8.531 for the refined crystal structure). The structure is triclinic <span><math><mtext>(</mtext><mtext>P</mtext><mtext>1</mtext><mtext>̄</mtext><mtext>,</mtext><mtext> Z=4</mtext><mtext>).</mtext></math></span> Five out of six of the CO<sub>2</sub><span>H groups in the asymmetric unit form </span><em>R</em><sub>2</sub><sup>2</sup><span>(8) hydrogen bond motifs with neighbouring CO</span><sub>2</sub>H groups. The motifs connect molecules to form pseudo-hexagonal, ten-molecule rings that fuse into supramolecular buckled honeycomb sheets, which stack and are linked by O–H⋯O hydrogen bonds.</p></div>","PeriodicalId":10766,"journal":{"name":"Crystal Engineering","volume":"6 1","pages":"Pages 57-67"},"PeriodicalIF":0.0,"publicationDate":"2003-03-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1016/S1463-0184(02)00022-9","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"77380088","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2003-03-01DOI: 10.1016/S1463-0184(03)00048-0
Daniel E. Lynch , Ian McClenaghan
The solid-state packing arrays of ten 4-chloro substituted 2-aminopyrimidines have been examined and the occurrence of N—H—Cl hydrogen-bonding associations in those structures discussed. The ten compounds were 4,6-dichloropyrimidine 1, 2-amino-4-chloro-6-(4-carbamoylpiperidinyl)pyrimidine hemihydrate 2, 2-amino-4-chloro-6-(4-fluorophenylthio)pyrimidine 3, 2-amino-4-chloro-6-(1-phenylethylamino)pyrimidine 4, 2-amino-4-chloro-6-benzylaminopyrimidine hydrate 5, 2-amino-4-chloro-6-isopropylaminopyrimidine 6, 2-amino-4-chloro-6-(4-(2,3-dimethylphenyl)piperizino)pyrimidine hydrate 7, 2-amino-4,6-dichloro-5-phenylpyrimidine 8, 2-amino-4-chloro-6-dimethylamino-5-phenylpyrimidine 9 and 2-amino-4-chloro-5-phenyl-6-thiomorpholinopyrimidine 10. The single-crystal x-ray structures of 1–4 have been previously reported while the structures of 5–10 are presented in this paper. All packing motifs, except compound 2, exhibit characteristic R22(8) hydrogen-bonded 2-aminopyrimidine dimers, to varying degrees of polymerisation. Only compounds 8 and 9 include N—H—Cl interactions, which for compound 8 is a three-center association in addition to a N—H—N interaction.
{"title":"The solid-state packing of chloro substituted 2-aminopyrimidines and the occurrence of N—H—CL hydrogen-bonding associations","authors":"Daniel E. Lynch , Ian McClenaghan","doi":"10.1016/S1463-0184(03)00048-0","DOIUrl":"https://doi.org/10.1016/S1463-0184(03)00048-0","url":null,"abstract":"<div><p>The solid-state packing arrays of ten 4-chloro substituted 2-aminopyrimidines have been examined and the occurrence of N—H—Cl hydrogen-bonding associations in those structures discussed. The ten compounds were 4,6-dichloropyrimidine <strong>1</strong>, 2-amino-4-chloro-6-(4-carbamoylpiperidinyl)pyrimidine hemihydrate <strong>2</strong>, 2-amino-4-chloro-6-(4-fluorophenylthio)pyrimidine <strong>3</strong>, 2-amino-4-chloro-6-(1-phenylethylamino)pyrimidine <strong>4</strong>, 2-amino-4-chloro-6-benzylaminopyrimidine <span><math><mtext>1</mtext><mtext>6</mtext></math></span> hydrate <strong>5</strong>, 2-amino-4-chloro-6-isopropylaminopyrimidine <strong>6</strong>, 2-amino-4-chloro-6-(4-(2,3-dimethylphenyl)piperizino)pyrimidine hydrate <strong>7</strong>, 2-amino-4,6-dichloro-5-phenylpyrimidine <strong>8</strong>, 2-amino-4-chloro-6-dimethylamino-5-phenylpyrimidine <strong>9</strong> and 2-amino-4-chloro-5-phenyl-6-thiomorpholinopyrimidine <strong>10</strong>. The single-crystal x-ray structures of <strong>1–4</strong> have been previously reported while the structures of <strong>5–10</strong> are presented in this paper. All packing motifs, except compound <strong>2</strong>, exhibit characteristic <em>R</em><sub>2</sub><sup>2</sup>(8) hydrogen-bonded 2-aminopyrimidine dimers, to varying degrees of polymerisation. Only compounds <strong>8</strong> and <strong>9</strong> include N—H—Cl interactions, which for compound <strong>8</strong> is a three-center association in addition to a N—H—N interaction.</p></div>","PeriodicalId":10766,"journal":{"name":"Crystal Engineering","volume":"6 1","pages":"Pages 1-14"},"PeriodicalIF":0.0,"publicationDate":"2003-03-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1016/S1463-0184(03)00048-0","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"137372132","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2003-03-01DOI: 10.1016/S1463-0184(03)00047-9
Beth Rather , Brian Moulton , Michael J. Zaworotko , Florent Perret , Nicole Morel-Desrosiers , Eric Da Silva , Anthony W. Coleman
The crystal structure of the 2:1 1,6-diamino-hexane: para-H-calix-4-arene-25,27-di-phosphonate complex shows a designed encapsulation of a calix-arene dimer within a three-dimensional matrix formed by the diamine molecules, the slight mismatch in the length of the diamine molecules compared to the size of the calix-arene molecule is compensated by chain folding in the diamine
{"title":"Crystal engineering of a calix-arene dimer embedded in a hydrophobic cavity formed by a diammonium host matrix","authors":"Beth Rather , Brian Moulton , Michael J. Zaworotko , Florent Perret , Nicole Morel-Desrosiers , Eric Da Silva , Anthony W. Coleman","doi":"10.1016/S1463-0184(03)00047-9","DOIUrl":"10.1016/S1463-0184(03)00047-9","url":null,"abstract":"<div><p>The crystal structure of the 2:1 1,6-diamino-hexane: <em>para</em>-H-calix-4-arene-25,27-di-phosphonate complex shows a designed encapsulation of a calix-arene dimer within a three-dimensional matrix formed by the diamine molecules, the slight mismatch in the length of the diamine molecules compared to the size of the calix-arene molecule is compensated by chain folding in the diamine</p></div>","PeriodicalId":10766,"journal":{"name":"Crystal Engineering","volume":"6 1","pages":"Pages 15-21"},"PeriodicalIF":0.0,"publicationDate":"2003-03-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1016/S1463-0184(03)00047-9","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"86757691","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2003-03-01DOI: 10.1016/S1463-0184(03)00002-9
A.R Choudhury , K Nagarajan , T.N Guru Row
Comparison of conformational features on halogen substitution in 1, 2-diaryl-6-methoxy-1, 2, 3, 4-tetrahydroisoquinolines based on crystal structures indicate that the derivatives with fluorine differ significantly from those of chlorine and bromine. The packing of the molecules in the lattice are nearly identical for derivatives of chlorine and bromine while the fluorine derivatives display C-F...F, C-H...F and C-F...π interactions.
{"title":"Crystal structure and molecular conformation of chloro and bromo phenyl derivatives of 1, 2-diaryl-6-methoxy-1, 2, 3, 4-tetrahydroisquinoline: A comparative study with fluoro analogues","authors":"A.R Choudhury , K Nagarajan , T.N Guru Row","doi":"10.1016/S1463-0184(03)00002-9","DOIUrl":"10.1016/S1463-0184(03)00002-9","url":null,"abstract":"<div><p>Comparison of conformational features on halogen substitution in 1, 2-diaryl-6-methoxy-1, 2, 3, 4-tetrahydroisoquinolines based on crystal structures indicate that the derivatives with fluorine differ significantly from those of chlorine and bromine. The packing of the molecules in the lattice are nearly identical for derivatives of chlorine and bromine while the fluorine derivatives display C-F...F, C-H...F and C-F...π interactions.</p></div>","PeriodicalId":10766,"journal":{"name":"Crystal Engineering","volume":"6 1","pages":"Pages 43-55"},"PeriodicalIF":0.0,"publicationDate":"2003-03-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1016/S1463-0184(03)00002-9","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"73136860","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2002-09-01DOI: 10.1016/S1463-0184(02)00037-0
A. Koblischka-Veneva , M.R. Koblischka , K. Ogasawara , M. Murakami
In this contribution, we apply orientation imaging microscopy (OIM) to melt-textured, bulk YBa2Cu3Oy (YBCO) samples, which require to perform an automated two-phase analysis. Both YBCO and the green phase Y2BaCuO5 (Y-211) are of orthorhombic crystal structures, but with clearly distinct unit cell parameters. We obtain the orientations of the individual crystallites and the misorientation distributions for both YBCO and Y-211. From the obtained data, we calculate the orientation distribution functions.
{"title":"Orientation imaging microscopy analysis of bulk, melt-textured YBCO superconductors","authors":"A. Koblischka-Veneva , M.R. Koblischka , K. Ogasawara , M. Murakami","doi":"10.1016/S1463-0184(02)00037-0","DOIUrl":"10.1016/S1463-0184(02)00037-0","url":null,"abstract":"<div><p>In this contribution, we apply orientation imaging microscopy (OIM) to melt-textured, bulk YBa<sub>2</sub>Cu<sub>3</sub>O<sub>y</sub> (YBCO) samples, which require to perform an automated two-phase analysis. Both YBCO and the green phase Y<sub>2</sub>BaCuO<sub>5</sub><span> (Y-211) are of orthorhombic crystal structures<span>, but with clearly distinct unit cell parameters<span>. We obtain the orientations of the individual crystallites and the misorientation distributions for both YBCO and Y-211. From the obtained data, we calculate the orientation distribution functions.</span></span></span></p></div>","PeriodicalId":10766,"journal":{"name":"Crystal Engineering","volume":"5 3","pages":"Pages 265-272"},"PeriodicalIF":0.0,"publicationDate":"2002-09-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1016/S1463-0184(02)00037-0","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"85567554","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Epitaxial thin films of RMnO3 (R=Sm, Eu, Gd, Dy) were prepared using liquid injection MOCVD and studied by XRD. The formation of high-temperature hexagonal polymorphic structure of DyMnO3 and non-existing-as-bulk hexagonal EuMnO3, GdMnO3 and SmMnO3 (traces) was observed on ZrO2(Y2O3) (111) substrates at 900 °C due to epitaxial stabilization. For the thickness exceeding the critical one the oriented stable perovskite form grew on the hexagonal phase. Parallel deposition on perovskite or non-coherent substrates gave only the stable perovskite phase, epitaxially grown in the former case or oriented in the latter.
{"title":"Hexagonal rare earth (R=Eu-Dy) manganites: XRD study of epitaxially stabilized films","authors":"A.A. Bosak , C. Dubourdieu , J.-P. Sénateur , O.Yu. Gorbenko , A.R. Kaul","doi":"10.1016/S1463-0184(02)00047-3","DOIUrl":"10.1016/S1463-0184(02)00047-3","url":null,"abstract":"<div><p><span>Epitaxial thin films of RMnO</span><sub>3</sub> (R=Sm, Eu, Gd, Dy) were prepared using liquid injection MOCVD and studied by XRD. The formation of high-temperature hexagonal polymorphic structure of DyMnO<sub>3</sub> and non-existing-as-bulk hexagonal EuMnO<sub>3</sub>, GdMnO<sub>3</sub> and SmMnO<sub>3</sub> (traces) was observed on ZrO<sub>2</sub>(Y<sub>2</sub>O<sub>3</sub><span>) (111) substrates at 900 °C due to epitaxial stabilization. For the thickness exceeding the critical one the oriented stable perovskite form grew on the hexagonal phase. Parallel deposition on perovskite or non-coherent substrates gave only the stable perovskite phase, epitaxially grown in the former case or oriented in the latter.</span></p></div>","PeriodicalId":10766,"journal":{"name":"Crystal Engineering","volume":"5 3","pages":"Pages 355-364"},"PeriodicalIF":0.0,"publicationDate":"2002-09-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1016/S1463-0184(02)00047-3","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"81079301","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}