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Identification of a Novel Activated NK-Associated Gene Score Associated with Diagnosis and Biological Therapy Response in Ulcerative Colitis. 鉴定与溃疡性结肠炎诊断和生物疗法反应相关的新型活化 NK 相关基因评分
IF 3 3区 医学 Q2 GASTROENTEROLOGY & HEPATOLOGY Pub Date : 2025-01-01 Epub Date: 2024-08-23 DOI: 10.1159/000540939
Siyuan Dong, Yu Zhang, Lingna Ye, Qian Cao
<p><strong>Introduction: </strong>Natural killer (NK) cells are associated with the pathogenesis of ulcerative colitis (UC); however, their precise contributions remain unclear. The present study aimed to investigate the diagnostic value of the activated NK-associated gene (ANAG) score in UC and evaluate its predictive value in response to biological therapy.</p><p><strong>Methods: </strong>Bulk RNA-seq and scRNA-seq datasets were obtained from the Gene Expression Omnibus (GEO) and Single Cell Portal (SCP) databases. In the bulk RNA-seq, differentially expressed genes (DEGs) were screened by the "Batch correction" and "Robust rank aggregation" (RRA) methods. The immune infiltration landscape was estimated using single-sample gene set enrichment analysis (ssGSEA) and CIBERSORT. DEGs that correlated with activated NK cells were identified as activated NK-associated genes (ANAGs). Protein-protein interaction (PPI) analysis and least absolute shrinkage and selection operator (LASSO) regression were used to screen key ANAGs and establish an ANAG score. The expression levels of the four key ANAGs were validated in human samples by real-time quantitative polymerase chain reaction (RT-qPCR) and immunofluorescence. The potential therapeutic drugs for UC were identified using the DSigDB database. Through scRNA-seq data analysis, the cell scores based on the ANAGs were calculated by "AddModuleScore" and "AUCell."</p><p><strong>Results: </strong>Immune infiltration analysis revealed a higher abundance of activated NK cells in noninflamed UC tissues (ssGSEA, p < 0.001; CIBERSORT, p < 0.01). Fifty-four DEGs correlated with activated NK cells were identified as ANAGs. The ANAG score was established using four key ANAGs (SELP, TIMP1, MMP7, and ABCG2). The ANAG scores were significantly higher in inflamed tissues (p < 0.001) and in biological therapy nonresponders (NR) tissues before treatment (golimumab, p < 0.05; ustekinumab, p < 0.001). The ANAG score demonstrated an excellent diagnostic value (AUC = 0.979). Patients with higher ANAG scores before treatment were more likely to experience a lack of response to golimumab or ustekinumab (golimumab, p < 0.05; ustekinumab, p < 0.001).</p><p><strong>Conclusion: </strong>This study established a novel ANAG score with the ability to precisely diagnose UC and distinguish the efficacy of biological treatment.</p><p><strong>Introduction: </strong>Natural killer (NK) cells are associated with the pathogenesis of ulcerative colitis (UC); however, their precise contributions remain unclear. The present study aimed to investigate the diagnostic value of the activated NK-associated gene (ANAG) score in UC and evaluate its predictive value in response to biological therapy.</p><p><strong>Methods: </strong>Bulk RNA-seq and scRNA-seq datasets were obtained from the Gene Expression Omnibus (GEO) and Single Cell Portal (SCP) databases. In the bulk RNA-seq, differentially expressed genes (DEGs) were screened by the "Batch correctio
导言:自然杀伤(NK)细胞与溃疡性结肠炎(UC)的发病机制有关,但其确切作用仍不清楚。本研究旨在探讨活化的 NK 相关基因(ANAG)评分在 UC 中的诊断价值,并评估其对生物疗法反应的预测价值:从基因表达总库(Gene Expression Omnibus,GEO)和单细胞门户(Single Cell Portal,SCP)数据库中获得了大量RNA-seq和scRNA-seq数据集。在批量RNA-seq中,通过 "批量校正 "和 "稳健秩聚集"(RRA)方法筛选差异表达基因(DEGs)。利用单样本基因组富集分析(ssGSEA)和 CIBERSORT 估算了免疫浸润情况。与活化 NK 细胞相关的 DEGs 被鉴定为活化 NK 相关基因(ANAGs)。蛋白质-蛋白质相互作用(PPI)分析和最小绝对收缩与选择算子(LASSO)回归用于筛选关键的 ANAGs 并确定 ANAG 分数。通过实时定量聚合酶链反应(RT-qPCR)和免疫荧光验证了四个关键ANAGs在人体样本中的表达水平。利用 DSigDB 数据库确定了潜在的 UC 治疗药物。通过scRNA-seq数据分析,用 "AddModuleScore "和 "AUCell "计算了基于ANAGs的细胞得分:结果:免疫浸润分析显示,非炎症 UC 组织中活化 NK 细胞的丰度更高(ssGSEA,P<0.001;CIBERSORT,P<0.01)。54个与活化NK细胞相关的DEGs被鉴定为ANAGs。利用四个关键的 ANAGs(SELP、TIMP1、MMP7 和 ABCG2)确定了 ANAG 分数。在炎症组织(P<0.001)和治疗前生物疗法无应答者(NR)组织(戈利木单抗,P<0.05;乌斯特库单抗,P<0.001)中,ANAG评分明显较高。ANAG 评分具有极高的诊断价值(AUC = 0.979)。治疗前ANAG评分较高的患者更有可能对戈利木单抗或乌斯特库单抗缺乏反应(戈利木单抗,P<0.05;乌斯特库单抗,P<0.001):本研究建立了一种新的 ANAG 评分标准,该评分标准能够精确诊断 UC 并区分生物治疗的疗效。
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引用次数: 0
Colorectal Cancer: Epidemiology, Risk Factors, and Public Health Strategies. 结直肠癌:流行病学、危险因素和公共卫生策略。
IF 3 3区 医学 Q2 GASTROENTEROLOGY & HEPATOLOGY Pub Date : 2025-01-01 Epub Date: 2025-02-12 DOI: 10.1159/000543921
Takahisa Matsuda, Ai Fujimoto, Yoshinori Igarashi

Background: Colorectal cancer (CRC) is a significant global health issue, ranking as the third most commonly diagnosed cancer and the second leading cause of cancer-related deaths. Countries with a high Human Development Index (HDI) report the highest incidence rates, driven by dietary and lifestyle factors. In contrast, low-to-middle HDI countries are experiencing rising CRC rates due to urbanization and westernization. Japan exemplifies this shift, with increasing CRC incidence linked to the adoption of westernized diets. Despite advances in screening and treatment, CRC-related mortality remains substantial, with 53,088 deaths reported in Japan.

Summary: This review examines global and regional CRC trends, focusing on incidence, mortality, and risk factors such as genetic predispositions, diet, and lifestyle influences. The review highlights the growing burden of CRC in Japan and other regions where dietary changes and urbanization are prevalent. Key findings include the significant impact of processed foods, sugary beverages, obesity, alcohol, and smoking on CRC risk, as well as the protective effects of vitamin D, calcium, and fermented foods. The role of inflammatory bowel disease and diabetes in CRC risk is also discussed. Furthermore, the review emphasizes the importance of public health initiatives, including organized screening programs, in mitigating the CRC burden.

Key messages: Understanding the interplay between genetic, lifestyle, and environmental factors is crucial for developing effective prevention strategies. Enhancing CRC screening, early detection, and public health interventions can significantly reduce CRC-related mortality. Continued research and collaboration are essential for advancing CRC prevention and improving global health outcomes.

背景:结直肠癌(CRC)是一个重要的全球健康问题,是第三大最常诊断的癌症,也是癌症相关死亡的第二大原因。受饮食和生活方式因素的影响,人类发展指数高的国家报告的发病率最高。相比之下,由于城市化和西方化,中低人类发展指数国家的结直肠癌发病率正在上升。日本是这种转变的典范,其CRC发病率的增加与采用西化饮食有关。尽管在筛查和治疗方面取得了进展,但crc相关死亡率仍然很高,日本报告的死亡人数为53,088人。摘要:本文综述了全球和地区的CRC趋势,重点关注发病率、死亡率和风险因素,如遗传易感性、饮食和生活方式的影响。该综述强调,在日本和其他饮食变化和城市化普遍存在的地区,结直肠癌的负担日益加重。主要发现包括加工食品、含糖饮料、肥胖、酒精和吸烟对结直肠癌风险的重大影响,以及维生素D、钙和发酵食品的保护作用。炎症性肠病(IBD)和糖尿病在结直肠癌风险中的作用也进行了讨论。此外,该综述强调了公共卫生倡议的重要性,包括有组织的筛查项目,以减轻结直肠癌的负担。关键信息:了解遗传、生活方式和环境因素之间的相互作用对于制定有效的预防策略至关重要。加强结直肠癌筛查、早期发现和公共卫生干预可以显著降低结直肠癌相关死亡率。持续的研究和合作对于推进结直肠癌预防和改善全球健康结果至关重要。
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引用次数: 0
Urgent Contrast-Enhanced Computed Tomography before Early Colonoscopy in the Management of Colonic Diverticular Bleeding: A Multicenter Randomized Controlled Trial. 早期结肠镜检查前紧急造影剂增强计算机断层扫描在结肠憩室出血治疗中的应用:多中心随机对照试验。
IF 3 3区 医学 Q2 GASTROENTEROLOGY & HEPATOLOGY Pub Date : 2025-01-01 Epub Date: 2024-10-15 DOI: 10.1159/000541942
Yuichiro Hirai, Toshio Uraoka, Michiko Wada, Hideki Mori, Ai Fujimoto, Yuko Sakakibara, Tatsuya Toyokawa, Takashi Kagaya, Yoshihiro Sasaki, Tomohiko Mannami, Toshio Kuwai, Noriko Watanabe, Hiroshige Hamada, Naoki Esaka, Toshihisa Kimura, Hiroyuki Fujii, Yasuo Hosoda, Masaaki Shimada, Hideharu Miyabayashi, Shinichi Somada, Katsuhiro Mabe, Shuji Inoue, Hiroki Saito, Kensuke Furuya, Norio Kawamura, Tomohiro Kudo, Keisuke Hori, Naoto Sakamoto, Mototsugu Kato, Nobuya Higuchi, Naohiko Harada

Introduction: Contrast-enhanced computed tomography (CE-CT) has been gaining attention as an initial investigation in the management of colonic diverticular bleeding (CDB), yet the role of CE-CT other than its diagnostic yield has not been adequately clarified. We aimed to determine whether the use of urgent CE-CT improves identification of stigmata of recent hemorrhage (SRH) in subsequently performed early colonoscopy (≤24 h of arrival) or other clinical outcomes of CDB.

Methods: We conducted a randomized, open-label, controlled trial at 23 institutions in Japan. Outpatients with suspected CDB were randomly assigned to undergo either urgent CE-CT followed by early colonoscopy (urgent-CE-CT + early-colonoscopy group) or early colonoscopy alone (early-colonoscopy group). The primary outcome was SRH identification. Secondary outcomes included successful endoscopic hemostasis, early (<30 days) and late (<1 year) rebleeding, length of hospital stay, and transfusion requirements.

Results: In total, 240 patients, mostly in a hemodynamically stable condition, were randomized. A contrast extravasation on CE-CT was observed in 20 of 115 patients (17.4%) in the urgent-CE-CT + early-colonoscopy group. SRH was identified in 23 of 115 patients (20.0%) in the urgent-CE-CT + early-colonoscopy group and 21 of 118 patients (17.8%) in the early-colonoscopy group (difference, 2.2; 95% confidence interval [CI], -7.9 to 12.3; p = 0.739). Successful endoscopic hemostasis was achieved in 21 patients in each group (18.3% and 17.8%, respectively) (difference, 0.5; 95% CI, -9.4 to 10.4; p = 1.000). There were also no significant differences between groups in early and late rebleeding, length of hospital stay, and transfusion requirements.

Conclusion: The use of urgent CE-CT before early colonoscopy did not improve SRH identification or other clinical outcomes in patients with suspected CDB in a hemodynamically stable condition. The routine use of urgent CE-CT as an initial investigation is not recommended in this population, also considering the low rate of extravasation-positive cases (UMIN registry number, UMIN000026865).

导言:对比增强计算机断层扫描(CE-CT)作为结肠憩室出血(CDB)治疗的初始检查手段已越来越受到关注,然而,CE-CT除诊断效果外的作用尚未得到充分阐明。我们的目的是确定使用紧急 CE-CT 是否能在随后进行的早期结肠镜检查(到达时间≤24 小时)中提高对近期出血迹象(SRH)的识别率,或改善 CDB 的其他临床结果:我们在日本的 23 家机构开展了一项随机、开放标签对照试验。疑似 CDB 的门诊患者被随机分配接受紧急 CE-CT 和早期结肠镜检查(紧急 CE-CT + 早期结肠镜检查组)或单独接受早期结肠镜检查(早期结肠镜检查组)。主要结果是SRH鉴定。次要结果包括内镜止血成功率、早期(30 天)和晚期(1 年)再出血、住院时间和输血需求:共有 240 名患者接受了随机治疗,其中大部分患者的血流动力学状况稳定。在紧急CE-CT+早期结肠镜检查组的115例患者中,有20例(17.4%)在CE-CT上观察到造影剂外渗。急诊-CE-CT + 早期结肠镜检查组 115 例患者中有 23 例(20.0%)发现了 SRH,早期结肠镜检查组 118 例患者中有 21 例(17.8%)发现了 SRH(差异为 2.2;95% 置信区间 [CI],-7.9 至 12.3;P=0.739)。两组各有21名患者(分别为18.3%和17.8%)成功实现了内镜止血(差异为0.5;95% 置信区间[CI]为-9.4至10.4;P=1.000)。各组在早期和晚期再出血、住院时间和输血需求方面也无明显差异:结论:对于血流动力学稳定的疑似 CDB 患者,在早期结肠镜检查前使用紧急 CE-CT 并不能改善 SRH 识别或其他临床结果。考虑到外渗阳性病例的比例较低(UMIN 登记号,UMIN000026865),不建议将紧急 CE-CT 作为此类人群的常规初始检查方法。
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引用次数: 0
Cost-Effectiveness Analysis of Endoscopic Treatment versus Medication Strategy for Proton Pump Inhibitor-Refractory Gastroesophageal Reflux Disease. 质子泵抑制剂难治性胃食管反流病的内镜治疗与药物治疗的成本-效果分析
IF 3.6 3区 医学 Q2 GASTROENTEROLOGY & HEPATOLOGY Pub Date : 2025-01-01 Epub Date: 2024-12-30 DOI: 10.1159/000543365
Fumiaki Ishibashi, Sho Suzuki, Kentaro Mochida, Takao Tonishi, Yuichi Ishibashi

Introduction: Potassium-competitive acid blockers are effective against proton pump inhibitor-refractory gastroesophageal reflux disease; however, their long-term use is associated with economic disadvantages. Endoscopic procedures may reduce potassium-competitive acid blocker use. This study aimed to determine the optimal treatment strategy for patients with proton pump inhibitor-refractory gastroesophageal reflux disease from a cost-effectiveness perspective.

Methods: Using a Markov state transition model to simulate symptom changes in patients with proton pump inhibitor-refractory gastroesophageal reflux disease, the cost-effectiveness of two strategies was compared: endoscopic treatment (anti-reflux mucosectomy or endoscopic submucosal dissection for gastroesophageal reflux disease) followed by potassium-competitive acid blocker versus medication with high-dose potassium-competitive acid blocker. In both strategies, potassium-competitive acid blocker maintained symptoms at the lowest controllable dose. The time horizon varied from 10 to 50 years. The quality-adjusted life year and incremental cost-effectiveness ratio were calculated. Willingness to pay was set at 5,000,000 Japanese yen.

Results: The quality-adjusted life years gained were 0.90 and 0.95 for the endoscopic treatment and medication strategies, respectively. The incremental cost-effectiveness ratio varied with the follow-up period after the initial treatment, with the endoscopic treatment strategy being more cost-effective than the medication strategy at ≥50 years of follow-up. A dose reduction success rate of <84.1% for high-dose potassium-competitive acid blocker and an endoscopic treatment success rate of >66.8% were required to determine the superiority of the endoscopic treatment strategy at the 50-year follow-up after treatment.

Conclusions: The endoscopic treatment strategy is not cost-effective unless the patient is followed up for >50 years after the initial treatment.

导读:钾竞争酸阻滞剂对质子泵抑制剂难治性胃食管反流病有效;然而,长期使用它们会带来经济上的缺点。内镜手术可减少钾竞争性酸阻滞剂的使用。本研究旨在从成本-效果的角度确定质子泵抑制剂难治性胃食管反流病患者的最佳治疗策略。方法:采用马尔可夫状态转换模型模拟质子泵抑制剂难治性胃食管反流病患者的症状变化,比较两种策略的成本-效果:内镜治疗(抗反流粘膜切除术或内镜下粘膜剥离治疗胃食管反流病)后服用钾竞争酸阻滞剂与大剂量钾竞争酸阻滞剂。在这两种策略中,钾竞争性酸阻滞剂在最低可控剂量下维持症状。时间范围从10年到50年不等。计算质量调整寿命年和增量成本-效果比。支付意愿设定为500万日元。结果:内镜治疗和用药策略获得的质量调整生命年分别为0.90和0.95。初始治疗后的增量成本-效果比随随访时间而变化,在≥50年的随访中,内镜治疗策略比药物治疗策略更具成本效益。在治疗后50年的随访中,需要66.8%的减剂量成功率来确定内镜治疗策略的优越性。讨论/结论:内镜治疗策略不具有成本效益,除非患者在初始治疗后随访50年。
{"title":"Cost-Effectiveness Analysis of Endoscopic Treatment versus Medication Strategy for Proton Pump Inhibitor-Refractory Gastroesophageal Reflux Disease.","authors":"Fumiaki Ishibashi, Sho Suzuki, Kentaro Mochida, Takao Tonishi, Yuichi Ishibashi","doi":"10.1159/000543365","DOIUrl":"10.1159/000543365","url":null,"abstract":"<p><strong>Introduction: </strong>Potassium-competitive acid blockers are effective against proton pump inhibitor-refractory gastroesophageal reflux disease; however, their long-term use is associated with economic disadvantages. Endoscopic procedures may reduce potassium-competitive acid blocker use. This study aimed to determine the optimal treatment strategy for patients with proton pump inhibitor-refractory gastroesophageal reflux disease from a cost-effectiveness perspective.</p><p><strong>Methods: </strong>Using a Markov state transition model to simulate symptom changes in patients with proton pump inhibitor-refractory gastroesophageal reflux disease, the cost-effectiveness of two strategies was compared: endoscopic treatment (anti-reflux mucosectomy or endoscopic submucosal dissection for gastroesophageal reflux disease) followed by potassium-competitive acid blocker versus medication with high-dose potassium-competitive acid blocker. In both strategies, potassium-competitive acid blocker maintained symptoms at the lowest controllable dose. The time horizon varied from 10 to 50 years. The quality-adjusted life year and incremental cost-effectiveness ratio were calculated. Willingness to pay was set at 5,000,000 Japanese yen.</p><p><strong>Results: </strong>The quality-adjusted life years gained were 0.90 and 0.95 for the endoscopic treatment and medication strategies, respectively. The incremental cost-effectiveness ratio varied with the follow-up period after the initial treatment, with the endoscopic treatment strategy being more cost-effective than the medication strategy at ≥50 years of follow-up. A dose reduction success rate of <84.1% for high-dose potassium-competitive acid blocker and an endoscopic treatment success rate of >66.8% were required to determine the superiority of the endoscopic treatment strategy at the 50-year follow-up after treatment.</p><p><strong>Conclusions: </strong>The endoscopic treatment strategy is not cost-effective unless the patient is followed up for >50 years after the initial treatment.</p>","PeriodicalId":11315,"journal":{"name":"Digestion","volume":" ","pages":"277-286"},"PeriodicalIF":3.6,"publicationDate":"2025-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142920751","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Metagenomics Study Suggests the Role of Vitamins and Gut Microbiome in Autism Spectrum Disorder. 宏基因组学研究表明维生素和肠道微生物组在自闭症谱系障碍中的作用。
IF 3.6 3区 医学 Q2 GASTROENTEROLOGY & HEPATOLOGY Pub Date : 2025-01-01 Epub Date: 2025-04-29 DOI: 10.1159/000545483
Majid Komijani, Ez Sadoon Mahdi, Majid Komijani, Anita Alaghmand

Introduction: Autism is a neurological disability that often appears after the age of three in children, also known as an autism spectrum disorder (ASD). Several studies have examined the influence of some environmental factors, and many parameters related to the behavior of autistic patients have been measured in order to find ways to reduce ASD. This study investigates the relationship between ASD and serum levels of vitamin D3, B12, folic acid, and the gut microbiome.

Methods: The serum levels of vitamin D3, B12, and folic acid in ASD patients were measured by the ELISA method and compared to healthy groups. DNA was extracted from stool samples of ASD patients and the control group, and then the gut microbiome was investigated via a metagenomics approach. Metagenomics sequencing was performed to analyze the 16S rRNA gene sequencing for phylum and sub phylum level microbiome.

Result: The result showed no significant change in the VitD3 and folate levels of ASD patients compared to the control group (p = 0.157 and p = 0.0505, respectively). There was a significant difference in the VitB12 level between control healthy individuals and ASD patients, in which the serum VitB12 concentration was significantly lower than the control group (p = 0.0001). Our results regarding gut metagenomics showed that the abundance of the Actinobacteria by the phylum level was significantly higher in the ASD patients compared to the control group (p = 0.0013). The abundance of the Firmicutes by the phylum level was significantly lower in the ASD patients compared to the control group (p = 0.0016). The abundance of Bifidobacteriaceae, and Ruminococcaceae by the family level was significantly higher in the ASD patients compared to the control group (p = 0.0004 and p = 0.0489, respectively). Our results indicated less species richness in the ASD patients compared to the control group.

Conclusion: Patients with ASD have lower serum levels of vitamin B12 and different gut microbiome compared to healthy controls. Low vitamin B12 levels and altered gut microbiome are significantly associated with ASD in this study. However, further research is needed to determine whether these factors could serve as predictors of severe outcomes in ASD.

简介:自闭症是一种神经障碍,通常出现在三岁以后的儿童中,也被称为自闭症谱系障碍(ASD)。一些研究检查了一些环境因素的影响,并测量了许多与自闭症患者行为相关的参数,以找到减少ASD的方法。本研究探讨了ASD与血清维生素D3、B12、叶酸水平和肠道微生物群之间的关系。方法:采用ELISA法测定ASD患者血清维生素D3、B12、叶酸水平,并与健康组进行比较。从ASD患者和对照组的粪便样本中提取DNA,然后通过宏基因组学方法研究肠道微生物组。采用宏基因组测序方法分析门和亚门水平微生物组的16S rRNA基因序列。结果:与对照组相比,ASD患者的维生素d3和叶酸水平无显著变化(p=0.157和p=0.0505)。对照组健康个体与ASD患者血清VitB12水平差异有统计学意义,其中ASD患者血清VitB12浓度显著低于对照组(p=0.0001)。我们的肠道宏基因组学结果显示,ASD患者的放线菌丰度(按门水平计算)显著高于对照组(p=0.0013)。在门水平上,ASD患者厚壁菌门的丰度明显低于对照组(p=0.0016)。双歧杆菌科(Bifidobacteriaceae)和瘤胃球菌科(Ruminococcaceae)的家族丰度在ASD患者中显著高于对照组(p=0.0004)。p=0.0489)。我们的研究结果表明,与对照组相比,ASD患者的物种丰富度较低。结论:与健康对照组相比,ASD患者血清中维生素B12水平较低,肠道微生物群也有所不同。在这项研究中,低维生素B12水平和改变的肠道微生物组与ASD显著相关。然而,需要进一步的研究来确定这些因素是否可以作为ASD严重结局的预测因素。
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引用次数: 0
Questionnaire Survey on the Diagnosis and Treatments of Eosinophilic Gastrointestinal Diseases in Asia. 亚洲地区嗜酸性胃肠道疾病(EGID)诊断与治疗的问卷调查。
IF 3 3区 医学 Q2 GASTROENTEROLOGY & HEPATOLOGY Pub Date : 2025-01-01 Epub Date: 2025-02-13 DOI: 10.1159/000544725
Yoshikazu Tsuzuki, Akiko Shiotani, Kazuya Miyaguchi, Shouko Ono, Yutaka Saito, Mitsushige Sugimoto, Yuji Naito, Sachiyo Nomura, Osamu Handa, Tadakazu Hisamatsu, Mitsuhiro Fujishiro, Takahisa Matsuda, Yoshinori Morita, Naohisa Yahagi, Francis K L Chan, Tiing Leong Ang, Murdani Abdullah, Maria Carla Tablante, Varayu Prachayakul, Baiwen Li, Hwoon-Yong Jung, Hisashi Matsumoto, Rie Shiomi, Hiroyuki Imaeda

Introduction: Eosinophilic gastrointestinal disease (EGID) is divided into eosinophilic esophagitis (EoE) and non-eosinophilic esophagitis eosinophilic gastrointestinal disease (non-EoE-EGID), based on the involved gastrointestinal organs. The present survey was performed to provide an overview of the current status of the epidemiology, diagnosis, and treatment of EGID in Asia.

Methods: Responses to the questionnaire were obtained from 228 doctors at various institutions in eight Asian countries. The questionnaire consisted of 52 questions on EoE and non-EoE EGID.

Results: Responses to questionnaire were obtained from 228 doctors from eight countries. The most common participation facilities were university hospitals, followed by public hospitals, private hospitals, and private clinics. 1-10 were the most frequent patients per year in each institution for both EoE and non-EoE-EGID. The 30s and 40s are common age groups for both EoE and non-EoE-EGID. Although endoscopic findings vary among countries, 15 or more eosinophil infiltrations in high-power fields as a diagnostic criterion are used in all countries for EoE. As treatments, the prescription rates of Proton pump inhibitor, diet, topical and systemic steroids, and biologics were similar among the eight countries in EoE. Non-EoE-EGID showed a similar trend to EoE in epidemiology, symptoms, diagnosis, and treatment.

Conclusion: The questionnaire survey partially revealed the current status of the epidemiology, symptoms, diagnosis, and treatment of EGID in Asian countries.

导言:嗜酸性粒细胞胃肠病(EGID)根据受累的胃肠道器官分为嗜酸性粒细胞食管炎(EoE)和非嗜酸性粒细胞食管炎嗜酸性粒细胞胃肠病(non-EoE-EGID)。本调查旨在概述亚洲嗜酸性粒细胞食管炎的流行病学、诊断和治疗现状:方法:调查问卷由八个亚洲国家不同机构的 228 名医生填写。调查问卷包括 52 个关于肠易激综合征和非肠易激综合征的问题:来自 8 个国家的 228 名医生对调查问卷进行了回复。最常见的参与机构是大学医院,其次是公立医院、私立医院和私人诊所。在每个机构中,每年最常见的患者人数为1-10人,包括肠易激综合征和非肠易激综合征患者。30和40岁是咽鼓管畸形和非咽鼓管畸形的常见年龄段。尽管各国的内窥镜检查结果不同,但所有国家都将高倍视野中 15 个或 15 个以上嗜酸性粒细胞浸润作为咽鼓管畸形的诊断标准。在治疗方法方面,八个国家的咽喉炎患者处方质子泵抑制剂(PPI)、饮食、局部和全身类固醇以及生物制剂的比例相似。非EoE-EGID在流行病学、症状、诊断和治疗方面的趋势与EoE相似:此次问卷调查部分揭示了亚洲国家在肠道外营养不良的流行病学、症状、诊断和治疗方面的现状。
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引用次数: 0
Inhibitory Effects of Probiotic and Gastro-Intestinal Bacteria on Helicobacter pylori in vitro. 益生菌和胃肠道细菌对幽门螺杆菌的体外抑制作用。
IF 3.6 3区 医学 Q2 GASTROENTEROLOGY & HEPATOLOGY Pub Date : 2025-01-01 Epub Date: 2025-02-13 DOI: 10.1159/000543447
Johannes Raphael Westphal, Nadine Koch, Lukas Macke, Riccardo Vasapolli, Didem Saka, Ramiro Vilchez-Vargas, Tianjun Song, Peter Malfertheiner, Christian Schulz

Introduction: Helicobacter pylori is a highly prevalent pathogen affecting approximately 50% of the world population, causing chronic gastritis and subsequently adenocarcinoma. Antibiotic resistance rates in H. pylori are increasing, thus demanding alternative treatment options. Some beneficial bacteria, including probiotics and gastrointestinal commensals, were shown to inhibit H. pylori growth, viability, and initial attachment to the gastric epithelium.

Methods: In this review, we systematically summarized the currently available literature for in vitro inhibition of H. pylori through beneficial bacteria from the Lactobacillales order. We performed research on PubMed and Google Scholar in accordance with the PRISMA guidelines.

Results: A multitude of species were shown to possess anti-H. pylori activity, although the majority of investigated bacteria belonged to only one bacterial genus: Lactobacillus. Anti-H. pylori activity was mediated through transcriptional modulation of virulence factors, competition for binding sites, the induction of a dormancy state of H. pylori, and the secretion of anti-H. pylori compounds.

Conclusion: Many bacterial compounds that show probiotic properties are capable of inhibiting H. pylori in in vitro experiments. However, a huge variety of test methods to detect anti-H. pylori effects demands standardization.

简介:幽门螺杆菌是一种高度流行的病原体,影响世界上大约50%的人口,引起慢性胃炎和随后的腺癌。幽门螺杆菌的抗生素耐药率正在增加,因此需要替代治疗方案。一些有益细菌,包括益生菌和胃肠道共生菌,被证明可以抑制幽门螺杆菌的生长、活力和胃上皮的初始附着。方法:本文系统地综述了目前有关乳酸杆菌目有益菌体外抑制幽门螺杆菌的文献。我们按照PRISMA指南在PubMed和谷歌scholar上进行了研究。结果:大量的物种被证明具有抗h。尽管大多数被调查的细菌只属于一种细菌属:乳酸杆菌。Anti-H。幽门螺杆菌的活性是通过毒力因子的转录调节、结合位点的竞争、幽门螺杆菌休眠状态的诱导和抗幽门螺杆菌的分泌来介导的。螺杆菌的化合物。结论:体外实验表明,许多具有益生菌特性的细菌化合物具有抑制幽门螺杆菌的作用。然而,检测抗h抗体的检测方法种类繁多。幽门螺杆菌效应需要标准化。
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引用次数: 0
Associations between Serum Insulin-Like Growth Factor-Related Molecules and Colorectal Cancer Risk by Tumor Location: A Nested Case-Control Study. 血清胰岛素样生长因子相关分子与结直肠癌风险与肿瘤位置的关系:一项巢式病例对照研究
IF 3.6 3区 医学 Q2 GASTROENTEROLOGY & HEPATOLOGY Pub Date : 2025-01-01 Epub Date: 2025-03-25 DOI: 10.1159/000545457
Yasushi Adachi, Yasushi Adachi, Masanori Nojima, Yingsong Lin, Yasushi Sasaki, Hiro-O Yamano, Hiroshi Nakase, Kenji Wakai, Mitsuru Mori, Akiko Tamakoshi

Introduction: The activity of the mitogen insulin-like growth factor (IGF) is controlled by IGF-binding protein (IGFBP). Colorectal cancers (CRCs) are heterogeneous, with left- and right-sided CRCs, showing different clinical and molecular characteristics. This case-control study, nested in the Japan Collaborative Cohort study, assessed associations between serum levels of IGF-related molecules and incidences of CRC by location.

Methods: A baseline survey obtained serum samples from 39,242 participants. Subjects diagnosed with CRC during follow-up were regarded as cases. Conditional logistic regression modeling was used to calculate odds ratios (ORs) for cancer incidence associated with IGF-related molecules.

Results: This analysis included 176 cases and 524 controls. No IGF-related molecules appeared associated with risks of overall or left-sided CRC. Both total IGFBP3 and free IGFBP3 (estimated as IGFBP3 - [IGF1 + IGF2]) were associated with incidence of right-sided CRC (p for trends = 0.027 and 0.003, respectively), with the third tertile of total and free IGFBP3 showing the highest risk (OR = 6.25 and 7.96, respectively). Free IGF, estimated as (IGF1 + IGF2)/IGFBP3, was inversely associated with incidence of right-sided CRC (p for trends = 0.014), with the third tertile showing the lowest risk (OR = 0.18). Among subjects followed for over 3 years, the association of IGF-related molecules with overall CRC was similar. Free IGFBP3 was associated with the incidence of right-sided CRC (p for trends = 0.004). Free IGF was inversely associated with the incidence of right-sided CRC (p for trends = 0.002). However, free IGFs were associated with a risk of left-sided CRC (p for trends = 0.041), with the third tertile showing the highest risk (OR = 3.10).

Conclusions: Serum IGF-related molecules are associated with the risk of CRC. These associations might differ by tumor location.

导言:有丝分裂原胰岛素样生长因子(IGF)的活性受 IGF 结合蛋白(IGFBP)控制。结直肠癌(CRC)具有异质性,左侧和右侧结直肠癌显示出不同的临床和分子特征。这项病例对照研究嵌套在日本协作队列研究中,按部位评估了血清中 IGF 相关分子水平与 CRC 发病率之间的关系。方法:基线调查获得了 39,242 名参与者的血清样本。随访期间确诊为 CRC 的受试者被视为病例。采用条件逻辑回归模型计算与 IGF 相关分子有关的癌症发病率的几率比 (OR)。结果:该分析包括 176 例病例和 524 例对照。没有发现任何 IGF 相关分子与总体或左侧 CRC 风险相关。总 IGFBP3 和游离 IGFBP3(估算为 IGFBP3-(IGF1+IGF2))均与右侧 CRC 的发病率相关(趋势比分别为 0.027 和 0.003),其中总 IGFBP3 和游离 IGFBP3 的第三三分位数风险最高(OR 分别为 6.25 和 7.96)。游离 IGF 的估计值为(IGF1+IGF2)/IGFBP3,它与右侧 CRC 的发病率成反比(P-for-trends=0.014),其中第三分位数的风险最低(OR=0.18)。在随访3年以上的受试者中,IGF相关分子与总体CRC的关系相似。游离 IGFBP3 与右侧 CRC 的发病率相关(P-趋势=0.004)。游离 IGF 与右侧 CRC 的发病率成反比(趋势比=0.002)。然而,游离 IGF 与左侧 CRC 的发病风险相关(趋势比=0.041),其中第三三分位数的风险最高(OR=3.10)。结论:血清 IGF 相关分子与 CRC 风险相关。这些关联可能因肿瘤位置而异。
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引用次数: 0
Identification and Verification of B4GALNT2 as an Epigenetic Marker in Ulcerative Colitis. B4GALNT2作为溃疡性结肠炎表观遗传标志物的鉴定和验证。
IF 3.6 3区 医学 Q2 GASTROENTEROLOGY & HEPATOLOGY Pub Date : 2025-01-01 Epub Date: 2025-04-23 DOI: 10.1159/000545944
Yi Zhu, Yi Zhu, Yuan Zhou, Honggang Jiang, Zhiheng Chen, Bohao Lu, Jiaming Wu

Introduction: Ulcerative colitis (UC) represents an inflammatory bowel disease characterized with a multifaceted pathogenesis, which may be attributed to influence by genetic factors. This study aimed to identify and validate novel markers associated with UC, with a specific focus on their regulation through DNA methylation.

Methods: Gene expression and DNA methylation profiling of intestinal mucosal tissues from UC and healthy controls was retrieved from the GEO repository. Differentially expressed and methylated genes were examined in UC. Subsequently, overlapped analyses were performed to identify highly expressed and hypomethylated genes, as well as lowly expressed and hypermethylated genes. Functional annotation, transcription factor-mRNA network analysis, and protein-protein interaction (PPI) network analysis were conducted for above genes. Dextran sodium sulfate (DSS)-induced LOVO and Caco-2 cells were established to stimulate UC injury. The expression and methylation of B4GALNT2 was verified by real-time quantitative polymerase chain reaction and methylation-specific PCR. Cell Counting Kit-8, flow cytometry, Western blot, and enzyme-linked immunosorbent assay were used to measure cell survival, apoptosis, and cytokine levels after B4GALNT2 overexpression.

Results: Our study screened 1 downregulated and hypermethylated gene (B4GALNT2) and 114 upregulated and hypomethylated genes in UC. They were markedly associated with immune response. Totally, 10 potential transcription factors were predicted. The PPI network revealed their complex interactions. B4GALNT2 was confirmed to be downregulated and hypermethylated in DSS-induced intestinal epithelial cells and in DSS-induced UC mouse model. B4GALNT2 overexpression enhanced cell viability and weakened apoptosis and cytokine production and release of DSS-induced intestinal epithelial cells.

Conclusion: Collectively, this study integrally analyzed DNA methylation and gene expression in UC as well as identified and verified B4GALNT2 as a key epigenetic marker.

背景:溃疡性结肠炎是一种多发病机制的炎症性肠病,可能受遗传因素的影响。本研究旨在鉴定和验证与溃疡性结肠炎相关的新标志物,并特别关注它们通过DNA甲基化的调节。方法:从GEO数据库中检索溃疡性结肠炎患者和健康对照者肠粘膜组织的基因表达和DNA甲基化谱。在溃疡性结肠炎中检测差异表达和甲基化基因。随后,进行重叠分析以鉴定高表达和低甲基化基因,以及低表达和高甲基化基因。对上述基因进行功能注释、转录因子- mrna网络分析和蛋白-蛋白相互作用(PPI)网络分析。建立dss诱导的LOVO和Caco-2细胞刺激溃疡性结肠炎损伤。RT-qPCR和MSP验证了B4GALNT2的表达和甲基化。CCK-8、流式细胞术、western blot和ELISA检测B4GALNT2过表达后的细胞存活、凋亡和细胞因子水平。结果:本研究在溃疡性结肠炎中筛选出1个下调和高甲基化基因(B4GALNT2)和114个上调和低甲基化基因。它们与免疫反应明显相关。共预测10个潜在转录因子。PPI网络揭示了它们之间复杂的相互作用。B4GALNT2在dss诱导的肠上皮细胞中被证实下调和高甲基化。B4GALNT2过表达增强了细胞活力,减弱了dss诱导的肠上皮细胞的凋亡和细胞因子的产生和释放。结论:本研究整体分析了溃疡性结肠炎DNA甲基化和基因表达,确定并验证了B4GALNT2是一个关键的表观遗传标记。
{"title":"Identification and Verification of B4GALNT2 as an Epigenetic Marker in Ulcerative Colitis.","authors":"Yi Zhu, Yi Zhu, Yuan Zhou, Honggang Jiang, Zhiheng Chen, Bohao Lu, Jiaming Wu","doi":"10.1159/000545944","DOIUrl":"10.1159/000545944","url":null,"abstract":"<p><strong>Introduction: </strong>Ulcerative colitis (UC) represents an inflammatory bowel disease characterized with a multifaceted pathogenesis, which may be attributed to influence by genetic factors. This study aimed to identify and validate novel markers associated with UC, with a specific focus on their regulation through DNA methylation.</p><p><strong>Methods: </strong>Gene expression and DNA methylation profiling of intestinal mucosal tissues from UC and healthy controls was retrieved from the GEO repository. Differentially expressed and methylated genes were examined in UC. Subsequently, overlapped analyses were performed to identify highly expressed and hypomethylated genes, as well as lowly expressed and hypermethylated genes. Functional annotation, transcription factor-mRNA network analysis, and protein-protein interaction (PPI) network analysis were conducted for above genes. Dextran sodium sulfate (DSS)-induced LOVO and Caco-2 cells were established to stimulate UC injury. The expression and methylation of B4GALNT2 was verified by real-time quantitative polymerase chain reaction and methylation-specific PCR. Cell Counting Kit-8, flow cytometry, Western blot, and enzyme-linked immunosorbent assay were used to measure cell survival, apoptosis, and cytokine levels after B4GALNT2 overexpression.</p><p><strong>Results: </strong>Our study screened 1 downregulated and hypermethylated gene (B4GALNT2) and 114 upregulated and hypomethylated genes in UC. They were markedly associated with immune response. Totally, 10 potential transcription factors were predicted. The PPI network revealed their complex interactions. B4GALNT2 was confirmed to be downregulated and hypermethylated in DSS-induced intestinal epithelial cells and in DSS-induced UC mouse model. B4GALNT2 overexpression enhanced cell viability and weakened apoptosis and cytokine production and release of DSS-induced intestinal epithelial cells.</p><p><strong>Conclusion: </strong>Collectively, this study integrally analyzed DNA methylation and gene expression in UC as well as identified and verified B4GALNT2 as a key epigenetic marker.</p>","PeriodicalId":11315,"journal":{"name":"Digestion","volume":" ","pages":"530-548"},"PeriodicalIF":3.6,"publicationDate":"2025-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143985173","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Retraction Statement. 撤销声明。
IF 3.6 3区 医学 Q2 GASTROENTEROLOGY & HEPATOLOGY Pub Date : 2025-01-01 Epub Date: 2025-09-19 DOI: 10.1159/000548053
{"title":"Retraction Statement.","authors":"","doi":"10.1159/000548053","DOIUrl":"10.1159/000548053","url":null,"abstract":"","PeriodicalId":11315,"journal":{"name":"Digestion","volume":" ","pages":"625"},"PeriodicalIF":3.6,"publicationDate":"2025-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145091393","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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