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Using Next-generation Sequencing to Identify Novel Exosomal miRNAs as Biomarkers for Significant Hepatic Fibrosis. 使用新一代测序鉴定新的外泌体mirna作为显著肝纤维化的生物标志物。
IF 1.4 4区 医学 Q3 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2021-05-01
Qianqian Wang, Qiankun Hu, Yue Ying, Chuan Lu, Weixia Li, Chenlu Huang, Wei Xu, Qiang Li, Xun Qi, Xueyun Zhang, Xiaoqin Liu, Zunguo Du, Yanling Feng, Yi Zhang, Xinyan Li, Yuanyuan Ji, Jiming Zhang, Jin Wang, Liang Chen, Yuxian Huang

Objective: The aim of this study is to determine the role of serum exosomal miRNAs as potential non-invasive biomarkers for distinguishing no-or-mild fibrosis from significant fibrosis in patients with chronic hepatitis B (CHB).

Methods: Next-generation sequencing was used to identify fibrosis-related serum exosomal miRNAs in 9 CHB patients. The candidate exosomal miRNAs were further validated by qRT-PCR in 282 CHB patients. Receiver operating characteristic curves were generated to assess the diagnostic performance of exosomal miRNAs and other non-invasive models.

Results: Seventy-two miRNAs were differentially expressed in serum exosomes between patients with no-or-mild fibrosis and significant fibrosis. The expression of serum exosomal miR-92a-3p and miR-146a-5p progressively increased with the aggravation of liver fibrosis in the validation cohort. Multivariate analysis identified miR-92a-3p (P<0.001), miR-146a-5p (P<0.001), and liver stiffness measurement (LSM) (P=0.012) as independent predictors for significant fibrosis. The area under the receiver operating characteristic curve (AUROC) of exosomal miR-92a-3p (AUROC=0.88) was significantly higher than that of APRI (aspartate aminotransferase-to-platelet ratio index) (AUROC=0.72, P<0.001), FIB-4 (AUROC=0.71, P<0.001), and LSM (AUROC=0.80, P=0.022) for identifying significant fibrosis. Similarly, the AUROC of exosomal miR-146a-5p (AUROC=0.82) was also significantly better than that of APRI (AUROC=0.72, P=0.009), FIB-4 (AUROC=0.71, P=0.002), and comparable to LSM (AUROC=0.80, P=0.551) for discriminating significant fibrosis.

Conclusion: Serum exosomal miR-92a-3p and miR-146a-5p are superior to APRI, FIB-4, and LSM for diagnosing significant fibrosis in CHB patients and offer a promising non-invasive alternative to liver biopsy.

目的:本研究的目的是确定血清外泌体mirna作为区分慢性乙型肝炎(CHB)患者非或轻度纤维化与显著纤维化的潜在非侵入性生物标志物的作用。方法:采用新一代测序技术鉴定9例慢性乙型肝炎患者的纤维化相关血清外泌体mirna。在282例慢性乙型肝炎患者中,通过qRT-PCR进一步验证了候选外泌体mirna。生成接受者工作特征曲线,以评估外泌体mirna和其他非侵入性模型的诊断性能。结果:72种mirna在无或轻度纤维化和显著纤维化患者的血清外泌体中差异表达。在验证队列中,血清外泌体miR-92a-3p和miR-146a-5p的表达随着肝纤维化的加重而逐渐增加。结论:血清外泌体miR-92a-3p和miR-146a-5p在诊断CHB患者显著纤维化方面优于APRI、FIB-4和LSM,为肝活检提供了一种有希望的无创替代方法。
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引用次数: 0
Risk Factors of Fatal Outcome of Hospitalized Patients with COVID-19. COVID-19住院患者死亡结局的危险因素
IF 1.4 4区 医学 Q3 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2021-05-01
Weihua Wu, Xulei Zhang, Yuxin Chen, Baofeng Wang, Jing Wu, Yali Xiong, Bei Jia, Jian Wang, Juan Xia, Yangjuan Pu, Wensan Zhou, Zhong Chen, Zhaoping Zhang, Xiaomin Yan, Rui Huang, Chao Wu

Background: Few studies reported the risk factors of fatal outcome of hospitalized patients with coronavirus disease 2019 (COVID-19). We aimed to identify the independent risk factors associated with fatal outcome of hospitalized COVID-19 patients.

Methods: The clinical data of 109 consecutive COVID-19 patients including 40 (36.7%) common cases and 69 (63.3%) severe cases were included and analyzed.

Results: Multivariate regression analysis indicated that platelets (PLT, OR, 0.988; 95% CI, 0.978-0.998; P=0.017) and C-reactive protein (CRP) (OR, 1.047; 95% CI, 1.026-1.068; P<0.001) levels were the independent risk factors of fatal outcome in COVID-19 patients. The optimal cut-off value of PLT counts for predicting fatal outcome was 161x109/L with the area under receiver operating characteristic curve (AUROC) of 0.824 (95% CI, 0.739-0.890). The optimal cut-off value of CRP for the prediction of fatal outcome was 46.2 mg/L with the AUROC of 0.954 (95% CI, 0.896-0.985). The CRP levels had higher predictive values for fatal outcome than PLT (P=0.016). The cumulative survival rate was significantly higher in patients with PLT>161x109/L compared with patients with PLT≤161x109/L (89.4% vs. 12.5%, log-rank test X2=72.17; P<0.001). Survival rate of COVID-19 patients was prominently higher in CRP≤46.2 mg/L patients compared with patients with CRP>46.2 mg/L (95.9% vs. 22.9%, log-rank test X2=77.85; P<0.001).

Conclusions: PLT counts and CRP levels could predict fatal outcome of hospitalized COVID-19 patients with relatively high accuracy.

背景:影响2019冠状病毒病(COVID-19)住院患者死亡结局的危险因素报道较少。我们的目的是确定与住院COVID-19患者致命结局相关的独立危险因素。方法:对109例新冠肺炎患者的临床资料进行分析,其中普通病例40例(36.7%),重症病例69例(63.3%)。结果:多因素回归分析显示血小板(PLT, OR, 0.988;95% ci, 0.978-0.998;P=0.017)和c反应蛋白(CRP) (OR, 1.047;95% ci, 1.026-1.068;P161x109/L与PLT≤161x109/L患者比较(89.4% vs. 12.5%, log-rank检验X2=72.17;P46.2 mg/L (95.9% vs. 22.9%, log-rank检验X2=77.85;结论:PLT计数和CRP水平可预测COVID-19住院患者的致命结局,准确率较高。
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引用次数: 0
Metabolic Reprogramming of Myeloid-derived Suppressor Cells in the Tumor Microenvironment. 肿瘤微环境中髓源性抑制细胞的代谢重编程。
IF 1.4 4区 医学 Q3 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2021-05-01
Liang Liu, Shuping Huo, Jianghui Liu, Qiaomin Li, Jing Wang

A large number of studies on the metabolism of immune cells in anti-tumor response have been carried out in recent years. It is proved that metabolic reprogramming can determine the differentiation and functions of immune cells. Myeloid-derived suppressor cells (MDSCs) are a heterogeneous population of immunosuppressive cells in the tumor microenvironment (TME). They can significantly inhibit the anti-tumor response of T cells and play an important role in promoting tumor growth, metastasis, and invasion. This review summarizes the energy metabolic pathways of MDSCs in the TME, such as fatty acid oxidation (FAO), glycolysis, and amino acids (AAs) metabolism, and highlights the importance of metabolic reprogramming of MDSCs for its immunosuppressive functions.

近年来,人们对免疫细胞在抗肿瘤反应中的代谢进行了大量的研究。事实证明,代谢重编程可以决定免疫细胞的分化和功能。骨髓源性抑制细胞(MDSCs)是肿瘤微环境(TME)中异质的免疫抑制细胞群。它们能显著抑制T细胞的抗肿瘤反应,在促进肿瘤生长、转移和侵袭中发挥重要作用。本文综述了MDSCs在TME中的能量代谢途径,如脂肪酸氧化(FAO)、糖酵解和氨基酸(AAs)代谢,并强调了MDSCs的代谢重编程对其免疫抑制功能的重要性。
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引用次数: 0
Gene Signatures and Prognostic Value of m6A RNA Methylation Regulators in Uterine Corpus Endometrial Carcinoma. m6A RNA甲基化调控因子在子宫内膜癌中的基因特征及预后价值。
IF 1.4 4区 医学 Q3 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2021-05-01
Yuanling Feng, Chunfang Yao, Jiayu Shen, Jianwei Zhou

Background: Uterine corpus endometrial carcinoma (UCEC) is the second most common malignancy of female reproductive system. Though most UCEC are diagnosed at an early age, the mortality has increased. It is important to develop new targets for prognosis evaluation and treatment.

Methods: Expression profiles of 19 m6A regulators and UCEC samples' epidemiologic information were obtained from GTEx and TCGA datasets. Nonnegative matrix factorization (NMF) was used to cluster UCEC samples into three groups and overall survival (OS) was compared among them. Multivariate cox proportional hazard model was used to select targets for the construction of m6A-related prognosis prediction signature. A nomogram consisting of m6A-related signature, stage, and histology was provided for clinical application.

Results: Eighteen m6A regulators were found to be differentially expressed between normal sample and UCEC samples. There was a significant difference in the OS probability among three clusters with different expression levels of m6A. VIRMA, YTHDF3, and IGF2BP1 were picked as UCEC prognosis prediction signatures and the prognostic value was confirmed. Risk score estimated by this signature was demonstrated to be the independent prognostic factor for UCEC.

Conclusion: Aberrant expression of m6A RNA methylation regulators was significantly associated with the development and prognosis of UCEC. A three-gene signature consisting of VIRMA, YTHDF3, and IGF2BP1 may effectively predict the prognosis of UCEC patients.

背景:子宫体子宫内膜癌是女性生殖系统第二常见的恶性肿瘤。尽管大多数UCEC在早期就被诊断出来,但死亡率却有所上升。寻找新的预后评价和治疗靶点具有重要意义。方法:从GTEx和TCGA数据库获取19个m6A调控因子的表达谱和UCEC样本的流行病学信息。采用非负矩阵分解法(NMF)将UCEC样本分为三组,并比较各组的总生存期(OS)。采用多变量cox比例风险模型选择构建m6a相关预后预测信号的靶点。由m6a相关特征、分期和组织学组成的nomogram图供临床应用。结果:发现18个m6A调节因子在正常样品和UCEC样品中存在差异表达。在m6A表达水平不同的3个集群中,OS概率有显著差异。选择VIRMA、YTHDF3、IGF2BP1作为UCEC的预后预测特征,确认其预后价值。通过该特征估计的风险评分被证明是UCEC的独立预后因素。结论:m6A RNA甲基化调控因子的异常表达与UCEC的发展和预后有显著关系。由VIRMA、YTHDF3和IGF2BP1组成的三基因标记可以有效预测UCEC患者的预后。
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引用次数: 0
mTOR in the Mechanisms of Atherosclerosis and Cardiovascular Disease. mTOR在动脉粥样硬化和心血管疾病中的作用机制
IF 1.4 4区 医学 Q3 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2021-05-01
Zhe Liu, Yuxin Fan, Zhongliang Zhang, Yudong Fang, Xin Cheng, Qintong Yang, Jingwen Liu, Jun Xie

mTOR (the mammalian target of rapamycin) is a serine/threonine kinase that can regulate a variety of signaling pathways, including cell growth, proliferation, and apoptosis. mTOR can regulate the proliferation and migration of endothelial cells and smooth muscle cells during the occurrence and progression of atherosclerosis. By inhibiting or activating mTOR at different time points, atherosclerotic vulnerable plaques can be stabilized and the occurrence and progression of atherosclerosis can be impeded. The mTOR signaling pathway plays a multifaceted role in the progression of atherosclerosis. mTOR and its interactions with molecular targets in the mechanisms of atherosclerosis and cardiovascular diseases are reviewed in this article, taking into consideration their potential of opening up novel therapeutic avenues.

mTOR(哺乳动物雷帕霉素靶蛋白)是一种丝氨酸/苏氨酸激酶,可以调节多种信号通路,包括细胞生长、增殖和凋亡。在动脉粥样硬化的发生和发展过程中,mTOR可以调节内皮细胞和平滑肌细胞的增殖和迁移。通过在不同时间点抑制或激活mTOR,可以稳定动脉粥样硬化易损斑块,阻碍动脉粥样硬化的发生和发展。mTOR信号通路在动脉粥样硬化的发展中起着多方面的作用。本文综述了mTOR及其在动脉粥样硬化和心血管疾病机制中与分子靶点的相互作用,并考虑了它们开辟新的治疗途径的潜力。
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引用次数: 0
Efficacy of Remdesivir for COVID-19. 瑞德西韦治疗COVID-19的疗效。
IF 1.4 4区 医学 Q3 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2021-03-01
Hongming Zhang, Jibei Chen, Xiyong Wang, Baoan Chen

Remdesivir is a broad-spectrum antiviral agent. With the rapid spread of Coronavirus disease 2019 (COVID-19) globally, remdesivir is taking the spotlight for COVID-19 treatment. Despite the promising signs of anti-CoV activity in several preclinical and clinical studies, more data of remdesivir in the treatment of COVID-19 is still needed for evaluating its efficacy.

瑞德西韦是一种广谱抗病毒药物。随着2019冠状病毒病(COVID-19)在全球的迅速传播,瑞德西韦成为治疗COVID-19的焦点。尽管在一些临床前和临床研究中显示出抗冠状病毒活性的良好迹象,但仍需要更多的瑞德西韦治疗COVID-19的数据来评估其疗效。
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引用次数: 0
Advanced Techniques in Predicting Breast Tumor Response to Neoadjuvant Chemotherapy. 预测乳腺肿瘤对新辅助化疗反应的先进技术。
IF 1.4 4区 医学 Q3 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2021-03-01
Mohamed Abbas

Neoadjuvant therapy is used to treat breast cancer through preventive agents. This new type of chemotherapy is prescribed according to the size of the tumor, so as to reduce the tumor mass and give more surgical options. Neoadjuvant hormone treatment is also helping to shrink breast cancer in lymph nodes or elsewhere in the breast before surgery. A significant aspect of the treatment is to predict breast tumor response to neoadjuvant chemotherapy. Here, the latest advanced breast tumor response techniques have been presented for this type of therapy. These techniques are classified into three categories: deep and machine learning, quantitative ultrasound spectroscopy, and magnetic resonance imaging. These methods were important for the prediction of a tumor's chemical response to the neoadjuvant chemotherapy. Tumor response assessment leads to effective chemical treatment, which decreases the size of the breast tumor and allows surgery to remove the tumor effectively.

新辅助疗法是通过预防药物治疗乳腺癌。这种新型的化疗是根据肿瘤的大小来制定的,这样可以减少肿瘤的体积,给患者更多的手术选择。新辅助激素治疗也有助于在手术前缩小淋巴结或乳房其他部位的乳腺癌。治疗的一个重要方面是预测乳房肿瘤对新辅助化疗的反应。在这里,最新的先进的乳房肿瘤反应技术已经提出了这种类型的治疗。这些技术分为三类:深度和机器学习、定量超声光谱学和磁共振成像。这些方法对于预测肿瘤对新辅助化疗的化学反应非常重要。肿瘤反应评估导致有效的化学治疗,从而减少乳房肿瘤的大小,并允许手术有效地切除肿瘤。
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引用次数: 0
Acinar Cells Derived Exosomes Alleviate the Severity of Acute Pancreatitis. 腺泡细胞衍生外泌体减轻急性胰腺炎的严重程度。
IF 1.4 4区 医学 Q3 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2021-03-01
Yulin Guo, Feng Cao, Yixuan Ding, Jiongdi Lu, Shuang Liu, Fei Li

Background: Acute pancreatitis (AP) is a serious and can be lethal disease, with an incidence of 13 to 45 per 100,000 individuals per year. The underlying mechanism of AP is not fully understood. Exosomes have recently been identified as intercellular messengers that can participate in the pathogenesis of various diseases. Exosomes secreted by noninflammatory acinar cells may affect the activated and injured acinar cells during AP.

Aim: To investigate the effect of exosomes derived from acinar cells on the pathogenesis of AP.

Methods: Nanoparticle tracking analysis was applied to evaluating the exosomes derived from AR42J acinar cells. The viability and apoptosis of AP in vitro model cells were evaluated. Wistar rats were used to establish the in vivo AP rat model and the levels of serum pro-inflammatory cytokines and morphological changes in the pancreatic tissues were assessed. RNA sequencing and Kyoto Encyclopedia of Genes and Genomes databases (KEGG) based RNA enrichment analyses were applied to exploring the mechanisms underlying the effect of exosomes on the pathogenesis of AP.

Results: Acinar cell exosomes reduced the level of intracellular ROS production and improved the viability of AP model acinar cells by inhibiting apoptosis during AP. The exosomes decreased the circulating levels of IL-6 and TNF-alpha, and reduced the pathological scores and wet/dry weight ratios of pancreatic tissue in AP in vivo model rats. Among the upregulated and downregulated RNAs analyzed, the MAPK and NF-kappaB signaling pathways might be involved in the mechanisms underlying the protective effects of acinar cell-derived exosomes in AP.

Conclusion: Acinar cell-derived exosomes could reduce the apoptosis and ROS production in acinar cells during AP, and may alleviate the severity of AP via the MAPK and NF-kappaB signaling pathways.

背景:急性胰腺炎(AP)是一种严重且可能致命的疾病,每年每10万人中有13至45人的发病率。AP的潜在机制尚不完全清楚。外泌体最近被确定为参与多种疾病发病机制的细胞间信使。非炎症性腺泡细胞分泌的外泌体可能影响ap过程中激活和损伤的腺泡细胞。目的:探讨腺泡细胞外泌体在ap发病中的作用。方法:采用纳米颗粒跟踪分析方法对AR42J腺泡细胞外泌体进行评价。观察AP体外模型细胞的活力和凋亡情况。采用Wistar大鼠建立AP大鼠体内模型,观察血清促炎细胞因子水平及胰腺组织形态学变化。利用RNA测序和基于京都基因与基因组百科全书数据库(KEGG)的RNA富集分析来探索外泌体在ap发病机制中的作用机制。腺泡细胞外泌体通过抑制AP过程中的凋亡,降低细胞内ROS的产生水平,提高AP模型腺泡细胞的活力。外泌体降低循环IL-6和tnf - α水平,降低AP模型大鼠体内胰腺组织的病理评分和湿/干重比。在分析的上调和下调的rna中,MAPK和NF-kappaB信号通路可能参与了腺泡细胞源性外泌体在AP中保护作用的机制。结论:腺泡细胞源性外泌体可以减少AP中腺泡细胞的凋亡和ROS的产生,并可能通过MAPK和NF-kappaB信号通路减轻AP的严重程度。
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引用次数: 0
Alzheimer's Disease and Parkinson's Disease May Result from Reactivation of Embryologic Pathways Silenced at Birth. 阿尔茨海默病和帕金森病可能是出生时被沉默的胚胎学通路重新激活的结果。
IF 1.4 4区 医学 Q3 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2021-03-01
Steven Lehrer, Peter H Rheinstein

Alzheimer's disease (AD), Lewy Body Dementia (LBD), and Parkinson's disease (PD) form a continuum that may explain multiple aspects of age-related neurodegeneration. Inflammaging, the long-term result of the chronic physiological stimulation of the innate immune system, is integral to this process. The gut microbiome plays an important role in inflammaging, as it can release inflammatory products and communicate with other organs and systems. Although AD and PD are molecularly and clinically distinct disorders, their causes appear to underlie LBD. All three conditions lie on a continuum related to AD, PD, or LBD in vulnerable persons. Inflammation in AD is linked to cytokines and growth factors. Moreover, cytokines and neurotrophins profoundly affect PD and LBD. Growth factors, neurotrophins and cytokines are also involved in embryo neural development. Cytokines influence gene expression, metabolism, cell stress, and apoptosis in the preimplantation embryo. The responsible genes are silenced around birth. But if activated by inflammaging and viruses in the brain decades later, they could destroy the same neural structures they created in utero. For this reason, the pathology and progression of AD, LBD, and PD would be unique. Embryonic reactivation could explain two well documented features of AD. 1) NSAIDs reduce AD risk but fail as a treatment. 2) NSAIDs reduce AD risk because they suppress inflammaging. But they are not a treatment because they cannot silence the embryonic genes that have become active and damage the brain.

阿尔茨海默病(AD)、路易体痴呆症(LBD)和帕金森病(PD)形成了一个连续统一体,可以解释与年龄有关的神经变性的多个方面。炎症是先天性免疫系统长期受到生理刺激的结果,是这一过程不可或缺的组成部分。肠道微生物组在炎症过程中扮演着重要角色,因为它可以释放炎症产物并与其他器官和系统进行交流。虽然注意力缺失症和注意力缺陷症在分子和临床上都是不同的疾病,但它们的病因似乎都是枸杞多糖症的基础。所有这三种病症都与注意力缺失症、帕金森病或易感人群的枸杞多糖症有关。注意力缺失症的炎症与细胞因子和生长因子有关。此外,细胞因子和神经营养素对帕金森病和枸杞多糖症也有深远影响。生长因子、神经营养素和细胞因子也参与胚胎神经发育。细胞因子会影响胚胎植入前的基因表达、新陈代谢、细胞应激和细胞凋亡。相关基因在胚胎出生前后会被沉默。但是,如果几十年后大脑中的炎症和病毒激活了这些基因,它们就会破坏在子宫内形成的神经结构。因此,注意力缺失症、枸杞多糖症和帕金森病的病理和进展都是独一无二的。胚胎再激活可以解释有据可查的注意力缺失症的两个特征。1)非甾体抗炎药可降低注意力缺失症的风险,但不能作为治疗手段。2)非甾体抗炎药能降低注意力缺失症的风险,因为它们能抑制炎症反应。但非甾体抗炎药并不能治疗AD,因为它们不能抑制胚胎基因变得活跃并损害大脑。
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引用次数: 0
Laboratory Biomarkers for the Diagnosis and Management of Patients with COVID-19: an Updated Review. COVID-19患者诊断和管理的实验室生物标志物:最新综述
IF 1.4 4区 医学 Q3 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2021-03-01
Bin-Bin Li, Sheng-Jie Huang, Yi-Long Fu, Zhong-Lin Li, Juan Wang, Jin-Long Wang

Severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2) has become a global crisis due to strong infectivity and fast transmission speed. Some patients with Coronavirus Disease 2019 (COVID-19) progress rapidly and may develop fatal complications, which brings serious challenges in disease assessment and treatment. Recent progress in the understanding of the molecular biology of SARS-CoV-2 has led to the identification of a variety of laboratory biomarkers that could be potentially applied to clinical practice for the diagnosis, treatment, and prognosis of patients with COVID-19. In this review we summarize the updated status on the identification of COVID-19 related laboratory markers, and propose further direction on the application of these markers to clinical diagnosis and management of patients with COVID-19.

严重急性呼吸综合征冠状病毒-2 (SARS-CoV-2)因其传染性强、传播速度快,已成为全球性危机。部分2019冠状病毒病(COVID-19)患者进展迅速,并可能出现致命性并发症,这给疾病评估和治疗带来了严峻挑战。最近对SARS-CoV-2分子生物学的理解取得了进展,导致鉴定出多种实验室生物标志物,这些生物标志物可能潜在地应用于临床实践,用于COVID-19患者的诊断、治疗和预后。本文综述了新冠肺炎相关实验室标志物鉴定的最新进展,并提出了新冠肺炎相关标志物在临床诊断和治疗中的应用方向。
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引用次数: 0
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Discovery medicine
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