首页 > 最新文献

eLife最新文献

英文 中文
The Drosophila EGF domain protein uninflatable sets the switch between wrapping glia growth and axon wrapping instructed by Notch. 果蝇EGF结构域蛋白的非充气式设置了由Notch指示的包裹胶质细胞生长和轴突包裹之间的开关。
IF 6.4 1区 生物学 Q1 BIOLOGY Pub Date : 2026-02-03 DOI: 10.7554/eLife.105759
Marie Baldenius, Steffen Kautzmann, Rita Kottmeier, Jaqueline Zipfel, Christian Klämbt

In the peripheral nervous system, sensory and motor axons are generally covered by wrapping glial cell processes. This neuron-glia interaction requires an intricate coordination of glial growth and differentiation. How this is controlled molecularly remains largely unknown. At the example of Drosophila larval nerves, we show that glial growth, which occurs without any cell division, is initially triggered by the FGF-receptor tyrosine kinase Heartless (Htl). In a screen for genes acting downstream of activated FGF-receptor, we identified the large membrane protein Uninflatable (Uif), which supports the growth of excessive plasma membrane domains but does not support glial axon wrapping. Uif is also known to inhibit Notch. Surprisingly, we find that Notch signaling is required in postmitotic wrapping glia. While compromised Notch signaling results in a reduced wrapping efficiency, gain of Notch activity in wrapping glia leads to a hyperwrapping phenotype. Thus, Notch signaling is both necessary and sufficient for glial wrapping in Drosophila larvae. In addition, Notch suppresses both uif and htl function and thus stabilizes the switch between glial growth and glial axon wrapping. Given the general conservation of signaling mechanisms controlling glia development in mice and flies, similar mechanisms may act in the mammalian nervous system to control final glial differentiation.

在周围神经系统中,感觉轴突和运动轴突通常被包裹的胶质细胞突起覆盖。这种神经元与神经胶质的相互作用需要神经胶质生长和分化的复杂协调。这在分子上是如何控制的仍不得而知。在果蝇幼虫神经的例子中,我们发现胶质生长在没有任何细胞分裂的情况下发生,最初是由fgf受体酪氨酸激酶无情(Htl)触发的。在筛选活化的fgf受体下游的基因时,我们发现了大膜蛋白不可膨胀(Uif),它支持过多的质膜结构域的生长,但不支持胶质轴突包裹。已知Uif也能抑制Notch。令人惊讶的是,我们发现Notch信号在有丝分裂后的包裹性胶质细胞中是必需的。当Notch信号受损导致包裹效率降低时,Notch活性在包裹胶质细胞中的增加导致过度包裹表型。因此,Notch信号对于果蝇幼虫的神经胶质包裹是必要的和充分的。此外,Notch抑制uif和htl功能,从而稳定胶质生长和胶质轴突包裹之间的转换。鉴于控制小鼠和果蝇神经胶质发育的信号机制普遍保守,类似的机制可能在哺乳动物神经系统中起作用,以控制最终的神经胶质分化。
{"title":"The <i>Drosophila</i> EGF domain protein uninflatable sets the switch between wrapping glia growth and axon wrapping instructed by Notch.","authors":"Marie Baldenius, Steffen Kautzmann, Rita Kottmeier, Jaqueline Zipfel, Christian Klämbt","doi":"10.7554/eLife.105759","DOIUrl":"10.7554/eLife.105759","url":null,"abstract":"<p><p>In the peripheral nervous system, sensory and motor axons are generally covered by wrapping glial cell processes. This neuron-glia interaction requires an intricate coordination of glial growth and differentiation. How this is controlled molecularly remains largely unknown. At the example of <i>Drosophila</i> larval nerves, we show that glial growth, which occurs without any cell division, is initially triggered by the FGF-receptor tyrosine kinase Heartless (Htl). In a screen for genes acting downstream of activated FGF-receptor, we identified the large membrane protein Uninflatable (Uif), which supports the growth of excessive plasma membrane domains but does not support glial axon wrapping. Uif is also known to inhibit Notch. Surprisingly, we find that Notch signaling is required in postmitotic wrapping glia. While compromised <i>Notch</i> signaling results in a reduced wrapping efficiency, gain of <i>Notch</i> activity in wrapping glia leads to a hyperwrapping phenotype. Thus, Notch signaling is both necessary and sufficient for glial wrapping in <i>Drosophila</i> larvae. In addition, <i>Notch</i> suppresses both <i>uif</i> and <i>htl</i> function and thus stabilizes the switch between glial growth and glial axon wrapping. Given the general conservation of signaling mechanisms controlling glia development in mice and flies, similar mechanisms may act in the mammalian nervous system to control final glial differentiation.</p>","PeriodicalId":11640,"journal":{"name":"eLife","volume":"14 ","pages":""},"PeriodicalIF":6.4,"publicationDate":"2026-02-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12867482/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146112621","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Automatic learning mechanisms for flexible human locomotion. 灵活人体运动的自动学习机制。
IF 6.4 1区 生物学 Q1 BIOLOGY Pub Date : 2026-02-03 DOI: 10.7554/eLife.101671
Cris Rossi, Kristan Leech, Ryan Roemmich, Amy J Bastian

Movement flexibility and automaticity are necessary to successfully navigate different environments. When encountering difficult terrains such as a muddy trail, we can change how we step almost immediately so that we can continue walking. This flexibility comes at a cost since we initially must pay deliberate attention to how we are moving. Gradually, after a few minutes on the trail, stepping becomes automatic so that we do not need to think about our movements. Canonical theory indicates that different adaptive motor learning mechanisms confer these essential properties to movement: explicit control confers rapid flexibility, while forward model recalibration confers automaticity. Here, we uncover a distinct mechanism of treadmill walking adaptation - an automatic stimulus-response mapping - that confers both properties to movement. The mechanism is flexible as it learns stepping patterns that can be rapidly changed to suit a range of treadmill configurations. It is also automatic as it can operate without deliberate control or explicit awareness by the participants. Our findings reveal a tandem architecture of forward model recalibration and automatic stimulus-response mapping mechanisms for walking, reconciling different findings of motor adaptation and perceptual realignment.

运动灵活性和自动化是成功驾驭不同环境的必要条件。当遇到困难的地形,如泥泞的小路时,我们可以立即改变我们的步伐,以便我们可以继续行走。这种灵活性是有代价的,因为我们最初必须有意识地注意我们的移动方式。慢慢地,在路上走了几分钟后,迈步就变得自动了,这样我们就不需要考虑我们的动作了。规范理论表明,不同的自适应运动学习机制赋予运动这些基本属性:显式控制赋予快速灵活性,而正向模型重新校准赋予自动性。在这里,我们发现了一种独特的跑步机行走适应机制——一种自动的刺激-反应映射——赋予运动这两种特性。该机制是灵活的,因为它可以学习步进模式,可以迅速改变,以适应一系列的跑步机配置。它也是自动的,因为它可以在没有刻意控制或参与者明确意识的情况下运作。我们的研究结果揭示了行走的前向模型重新校准和自动刺激-反应映射机制的串联结构,调和了运动适应和知觉重新调整的不同发现。
{"title":"Automatic learning mechanisms for flexible human locomotion.","authors":"Cris Rossi, Kristan Leech, Ryan Roemmich, Amy J Bastian","doi":"10.7554/eLife.101671","DOIUrl":"10.7554/eLife.101671","url":null,"abstract":"<p><p>Movement flexibility and automaticity are necessary to successfully navigate different environments. When encountering difficult terrains such as a muddy trail, we can change how we step almost immediately so that we can continue walking. This flexibility comes at a cost since we initially must pay deliberate attention to how we are moving. Gradually, after a few minutes on the trail, stepping becomes automatic so that we do not need to think about our movements. Canonical theory indicates that different adaptive motor learning mechanisms confer these essential properties to movement: explicit control confers rapid flexibility, while forward model recalibration confers automaticity. Here, we uncover a distinct mechanism of treadmill walking adaptation - an automatic stimulus-response mapping - that confers both properties to movement. The mechanism is flexible as it learns stepping patterns that can be rapidly changed to suit a range of treadmill configurations. It is also automatic as it can operate without deliberate control or explicit awareness by the participants. Our findings reveal a tandem architecture of forward model recalibration and automatic stimulus-response mapping mechanisms for walking, reconciling different findings of motor adaptation and perceptual realignment.</p>","PeriodicalId":11640,"journal":{"name":"eLife","volume":"13 ","pages":""},"PeriodicalIF":6.4,"publicationDate":"2026-02-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12867481/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146112565","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
The chromatin remodeller CHD4 regulates transcription factor binding to both prevent activation of silent enhancers and maintain active regulatory elements. 染色质重塑体CHD4调节转录因子结合,既防止沉默增强子的激活,又维持活性调节元件。
IF 6.4 1区 生物学 Q1 BIOLOGY Pub Date : 2026-02-03 DOI: 10.7554/eLife.109280
Andria Koulle, Oluwaseun Ogundele, Devina Shah, India Baker, Maya Lopez, David Lando, Nicola Reynolds, Ramy Ragheb, Ernest D Laue, Brian Hendrich

Chromatin organisation and transcriptional regulation are tightly coordinated processes that are essential for maintaining cellular identity and function. ATP-dependent chromatin remodelling proteins play critical roles in control of genome structure and in regulating transcription across eukaryotes. Their essential nature, however, has made it difficult to define exactly how these functions are mediated. The chromatin remodeller CHD4 has been shown to be capable of sliding nucleosomes in vitro, and to regulate chromatin accessibility and gene expression in vivo. Using an inducible depletion system, here we identify a second mechanism of action for CHD4 in actively restricting the residence time of transcription factors (TFs) on chromatin. Together, these activities result in distinct, context-dependent outcomes: at highly accessible regulatory elements, CHD4 limits TF binding to maintain regulatory function, while at low-accessibility euchromatic regions, it prevents TF engagement and sustains chromatin compaction, thereby silencing cryptic enhancers. Collectively, these mechanisms enable CHD4 to reduce transcriptional noise while preserving the responsiveness of active regulatory networks.

染色质组织和转录调控是密切协调的过程,对维持细胞身份和功能至关重要。atp依赖的染色质重塑蛋白在控制基因组结构和调节真核生物的转录中发挥关键作用。然而,它们的本质使得很难确切地定义这些功能是如何介导的。染色质重塑体CHD4已被证明能够在体外滑动核小体,并在体内调节染色质可及性和基因表达。利用诱导耗尽系统,我们确定了CHD4在主动限制转录因子(tf)在染色质上停留时间方面的第二种作用机制。总之,这些活动导致不同的上下文依赖的结果:在高度可及的调控元件,CHD4限制TF结合以维持调控功能,而在低可及的同色区域,CHD4阻止TF结合并维持染色质压缩,从而沉默隐式增强子。总的来说,这些机制使CHD4能够减少转录噪声,同时保持主动调节网络的响应性。
{"title":"The chromatin remodeller CHD4 regulates transcription factor binding to both prevent activation of silent enhancers and maintain active regulatory elements.","authors":"Andria Koulle, Oluwaseun Ogundele, Devina Shah, India Baker, Maya Lopez, David Lando, Nicola Reynolds, Ramy Ragheb, Ernest D Laue, Brian Hendrich","doi":"10.7554/eLife.109280","DOIUrl":"10.7554/eLife.109280","url":null,"abstract":"<p><p>Chromatin organisation and transcriptional regulation are tightly coordinated processes that are essential for maintaining cellular identity and function. ATP-dependent chromatin remodelling proteins play critical roles in control of genome structure and in regulating transcription across eukaryotes. Their essential nature, however, has made it difficult to define exactly how these functions are mediated. The chromatin remodeller CHD4 has been shown to be capable of sliding nucleosomes in vitro, and to regulate chromatin accessibility and gene expression in vivo. Using an inducible depletion system, here we identify a second mechanism of action for CHD4 in actively restricting the residence time of transcription factors (TFs) on chromatin. Together, these activities result in distinct, context-dependent outcomes: at highly accessible regulatory elements, CHD4 limits TF binding to maintain regulatory function, while at low-accessibility euchromatic regions, it prevents TF engagement and sustains chromatin compaction, thereby silencing cryptic enhancers. Collectively, these mechanisms enable CHD4 to reduce transcriptional noise while preserving the responsiveness of active regulatory networks.</p>","PeriodicalId":11640,"journal":{"name":"eLife","volume":"14 ","pages":""},"PeriodicalIF":6.4,"publicationDate":"2026-02-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12867480/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146112603","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Repression of PRMT activities sensitize human homologous recombination-proficient ovarian and breast cancer cells to PARP inhibitor treatment. 抑制PRMT活性使人同源重组精通卵巢癌和乳腺癌细胞对PARP抑制剂治疗敏感。
IF 6.4 1区 生物学 Q1 BIOLOGY Pub Date : 2026-02-03 DOI: 10.7554/eLife.99225
Youyou Zhang, Mu Xu, Jiao Yuan, Zhongyi Hu, Junjie Jiang, Yanrong Sun, Jie Huang, Yuxin Wang, Bingwei Wang, Jianfeng Shen, Meixiao Long, Yi Fan, Kathleen T Montone, Janos Tanyi, Sarah H Kim, Omid Tavana, Robert H Vonderheide, Ho Man Chan, Susan Domchek, Lin Zhang, Xiaowen Hu

Therapeutic epigenetic modulation is currently being evaluated in the clinic to sensitize homologous recombination (HR)-proficient tumors to PARP inhibitors. To broaden its clinical applicability and identify more effective combination strategies, we conducted a drug screen combining PARP inhibitors with 74 well-characterized epigenetic modulators targeting five major classes of epigenetic enzymes. Notably, both type I PRMT inhibitors and PRMT5 inhibitors scored highly in combination efficacy and clinical prioritization. PRMT inhibition significantly enhanced PARP inhibitor-induced DNA damage in human HR-proficient ovarian and breast cancer cells. Mechanistically, PRMT suppression downregulates DNA damage repair genes and BRCAness-associated pathways, while also modulating intrinsic innate immune responses within cancer cells. Integrative analysis of large-scale genomic and functional datasets from TCGA and DepMap further supports PRMT1, PRMT4, and PRMT5 as promising therapeutic targets in oncology. Importantly, dual inhibition of PRMT1 and PRMT5 synergistically sensitizes tumors to PARP inhibitors. Collectively, our findings provide strong rationale for the clinical development of PRMT and PARP inhibitor combinations in HR-proficient ovarian and breast cancers.

治疗性表观遗传调节目前正在临床评估,以使同源重组(HR)精通的肿瘤对PARP抑制剂敏感。为了扩大其临床适用性并确定更有效的联合策略,我们进行了一项药物筛选,将PARP抑制剂与74种已知的表观遗传调节剂联合使用,靶向5类主要的表观遗传酶。值得注意的是,I型PRMT抑制剂和PRMT5抑制剂在联合疗效和临床优先级方面得分很高。PRMT抑制显著增强PARP抑制剂诱导的人类hr精通卵巢癌和乳腺癌细胞的DNA损伤。在机制上,PRMT抑制下调了DNA损伤修复基因和brcaness相关途径,同时也调节了癌细胞内固有的先天免疫反应。来自TCGA和DepMap的大规模基因组和功能数据集的综合分析进一步支持PRMT1、PRMT4和PRMT5作为肿瘤学中有希望的治疗靶点。重要的是,PRMT1和PRMT5的双重抑制协同作用使肿瘤对PARP抑制剂敏感。总的来说,我们的研究结果为PRMT和PARP抑制剂联合治疗hr熟练的卵巢癌和乳腺癌的临床发展提供了强有力的理论依据。
{"title":"Repression of PRMT activities sensitize human homologous recombination-proficient ovarian and breast cancer cells to PARP inhibitor treatment.","authors":"Youyou Zhang, Mu Xu, Jiao Yuan, Zhongyi Hu, Junjie Jiang, Yanrong Sun, Jie Huang, Yuxin Wang, Bingwei Wang, Jianfeng Shen, Meixiao Long, Yi Fan, Kathleen T Montone, Janos Tanyi, Sarah H Kim, Omid Tavana, Robert H Vonderheide, Ho Man Chan, Susan Domchek, Lin Zhang, Xiaowen Hu","doi":"10.7554/eLife.99225","DOIUrl":"10.7554/eLife.99225","url":null,"abstract":"<p><p>Therapeutic epigenetic modulation is currently being evaluated in the clinic to sensitize homologous recombination (HR)-proficient tumors to PARP inhibitors. To broaden its clinical applicability and identify more effective combination strategies, we conducted a drug screen combining PARP inhibitors with 74 well-characterized epigenetic modulators targeting five major classes of epigenetic enzymes. Notably, both type I PRMT inhibitors and PRMT5 inhibitors scored highly in combination efficacy and clinical prioritization. PRMT inhibition significantly enhanced PARP inhibitor-induced DNA damage in human HR-proficient ovarian and breast cancer cells. Mechanistically, PRMT suppression downregulates DNA damage repair genes and BRCAness-associated pathways, while also modulating intrinsic innate immune responses within cancer cells. Integrative analysis of large-scale genomic and functional datasets from TCGA and DepMap further supports PRMT1, PRMT4, and PRMT5 as promising therapeutic targets in oncology. Importantly, dual inhibition of PRMT1 and PRMT5 synergistically sensitizes tumors to PARP inhibitors. Collectively, our findings provide strong rationale for the clinical development of PRMT and PARP inhibitor combinations in HR-proficient ovarian and breast cancers.</p>","PeriodicalId":11640,"journal":{"name":"eLife","volume":"13 ","pages":""},"PeriodicalIF":6.4,"publicationDate":"2026-02-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12867483/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146112546","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Information, certainty, and learning. 信息、确定性和学习。
IF 6.4 1区 生物学 Q1 BIOLOGY Pub Date : 2026-02-02 DOI: 10.7554/eLife.102155
Justin A Harris, Charles Randy Gallistel

More than four decades ago, Gibbon and Balsam (1981) showed that the acquisition of Pavlovian conditioning in pigeons is directly related to the informativeness of the conditioning stimulus (CS) about the unconditioned stimulus (US), where informativeness is defined as the ratio of the US-US interval (C) to the CS-US interval (T). However, the evidence for this relationship in other species has been equivocal. Here, we describe an experiment that measured the acquisition of appetitive Pavlovian conditioning in 14 groups of rats trained with different C/T ratios (ranging from 1.5 to 300) to establish how learning is related to informativeness. We show that the number of trials required for rats to start responding to the CS is determined by the C/T ratio, and the specific scalar relationship between the rate of learning and informativeness is similar to that previously obtained with pigeons. We also found that the response rate after extended conditioning is strongly related to T, with the terminal CS response rate being a scalar function of the CS reinforcement rate (1 /T). Moreover, this same scalar relationship extended to the rats' response rates during the inter-trial interval, which was directly proportional to the overall rate of reinforcement in the context (1 /C). The findings establish that animals encode rates of reinforcement, and that conditioning is directly related to how much information the CS provides about the US. The consistency of these observations across species, captured by a simple regression function, suggests a universal model of conditioning.

四十多年前,Gibbon和Balsam(1981)表明,鸽子的巴甫洛夫条件反射习得与条件反射刺激(CS)对非条件刺激(US)的信息性直接相关,其中信息性被定义为US-US间隔(C)与CS-US间隔(T)的比值。然而,在其他物种中这种关系的证据一直是模棱两可的。在这里,我们描述了一项实验,该实验测量了14组接受不同C/T比率(从1.5到300)训练的大鼠的食欲巴甫洛夫条件反射的习得,以确定学习如何与信息性相关。我们发现,大鼠开始对CS做出反应所需的试验次数是由C/T比率决定的,学习速率和信息量之间的特定标量关系与之前在鸽子身上得到的结果相似。我们还发现,扩展条件反射后的反应率与T有很强的相关性,终端CS反应率是CS强化率(1 /T)的标量函数。此外,同样的标量关系扩展到大鼠在试验间隔期间的反应率,反应率与情境中的整体强化率成正比(1 /C)。研究结果表明,动物的强化率是编码的,而条件反射与CS提供的关于美国的信息的多少直接相关。通过一个简单的回归函数,这些观察结果在物种间的一致性表明了一个普遍的条件作用模型。
{"title":"Information, certainty, and learning.","authors":"Justin A Harris, Charles Randy Gallistel","doi":"10.7554/eLife.102155","DOIUrl":"10.7554/eLife.102155","url":null,"abstract":"<p><p>More than four decades ago, Gibbon and Balsam (1981) showed that the acquisition of Pavlovian conditioning in pigeons is directly related to the informativeness of the conditioning stimulus (CS) about the unconditioned stimulus (US), where informativeness is defined as the ratio of the US-US interval (<i>C</i>) to the CS-US interval (<i>T</i>). However, the evidence for this relationship in other species has been equivocal. Here, we describe an experiment that measured the acquisition of appetitive Pavlovian conditioning in 14 groups of rats trained with different <i>C</i>/<i>T</i> ratios (ranging from 1.5 to 300) to establish how learning is related to informativeness. We show that the number of trials required for rats to start responding to the CS is determined by the <i>C</i>/<i>T</i> ratio, and the specific scalar relationship between the rate of learning and informativeness is similar to that previously obtained with pigeons. We also found that the response rate after extended conditioning is strongly related to <i>T</i>, with the terminal CS response rate being a scalar function of the CS reinforcement rate (1 <i>/T</i>). Moreover, this same scalar relationship extended to the rats' response rates during the inter-trial interval, which was directly proportional to the overall rate of reinforcement in the context (1 <i>/C</i>). The findings establish that animals encode rates of reinforcement, and that conditioning is directly related to how much information the CS provides about the US. The consistency of these observations across species, captured by a simple regression function, suggests a universal model of conditioning.</p>","PeriodicalId":11640,"journal":{"name":"eLife","volume":"13 ","pages":""},"PeriodicalIF":6.4,"publicationDate":"2026-02-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12863717/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146104414","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
MRI sets its sights on collagen. 核磁共振把目光投向了胶原蛋白。
IF 6.4 1区 生物学 Q1 BIOLOGY Pub Date : 2026-02-02 DOI: 10.7554/eLife.110375
Fritz Schick

Reducing the echo time of a whole-body MRI scanner makes it possible to image collagen, an important structural protein found in bones and tendons.

减少全身核磁共振扫描仪的回波时间使胶原蛋白成像成为可能,胶原蛋白是骨骼和肌腱中发现的一种重要的结构蛋白。
{"title":"MRI sets its sights on collagen.","authors":"Fritz Schick","doi":"10.7554/eLife.110375","DOIUrl":"10.7554/eLife.110375","url":null,"abstract":"<p><p>Reducing the echo time of a whole-body MRI scanner makes it possible to image collagen, an important structural protein found in bones and tendons.</p>","PeriodicalId":11640,"journal":{"name":"eLife","volume":"15 ","pages":""},"PeriodicalIF":6.4,"publicationDate":"2026-02-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12863716/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146099988","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Single-nucleus transcriptional and chromatin accessibility analyses of maturing mouse Achilles tendon uncover the molecular landscape of tendon stem/progenitor cells. 成熟小鼠跟腱的单核转录和染色质可及性分析揭示了跟腱干/祖细胞的分子景观。
IF 6.4 1区 生物学 Q1 BIOLOGY Pub Date : 2026-02-02 DOI: 10.7554/eLife.104768
Hiroki Tsutsumi, Tomoki Chiba, Yuta Fujii, Takahide Matsushima, Tsuyoshi Kimura, Akinori Kanai, Akio Kishida, Yutaka Suzuki, Hiroshi Asahara

Tendons and ligaments are crucial connective tissues linking bones and muscles, yet achieving full functional recovery after injury remains challenging. We investigated the characteristics of tendon stem/progenitor cells (TSPCs) by focusing on the declining tendon repair capacity with growth. Using single-cell RNA sequencing on Achilles tendon cells from 2- and 6-week-old mice, we identified Cd55 and Cd248 as novel surface antigen markers for TSPCs. Combining single-cell RNA sequencing with single-nucleus RNA and ATAC sequencing analyses revealed that Cd55- and Cd248-positive fractions in tendon tissue represent TSPCs, as confirmed by their expression of established TSPC markers, with this population decreasing at 6 weeks. We also identified candidate upstream transcription factors regulating these fractions. Functional analyses of isolated CD55/CD248-positive cells demonstrated high clonogenic potential and tendon differentiation capacity, forming functional tendon-like tissue in vitro. This study establishes CD55 and CD248 as novel TSPC surface antigens, potentially advancing tendon regenerative medicine and contributing to the development of new treatment strategies for tendon and ligament injuries.

肌腱和韧带是连接骨骼和肌肉的重要结缔组织,但在受伤后实现完全功能恢复仍然具有挑战性。我们研究了肌腱干/祖细胞(TSPCs)的特征,重点研究了随着生长而下降的肌腱修复能力。通过对2周龄和6周龄小鼠跟腱细胞进行单细胞RNA测序,我们发现Cd55和Cd248是TSPCs的新型表面抗原标记物。结合单细胞RNA测序、单核RNA测序和ATAC测序分析显示,肌腱组织中Cd55和cd248阳性部分代表TSPC,正如它们表达已建立的TSPC标记所证实的那样,这一群体在6周时减少。我们还确定了调节这些部分的候选上游转录因子。分离的CD55/ cd248阳性细胞的功能分析显示出高克隆潜能和肌腱分化能力,在体外形成功能性肌腱样组织。本研究确定了CD55和CD248作为新的TSPC表面抗原,可能会促进肌腱再生医学的发展,并有助于开发肌腱和韧带损伤的新治疗策略。
{"title":"Single-nucleus transcriptional and chromatin accessibility analyses of maturing mouse Achilles tendon uncover the molecular landscape of tendon stem/progenitor cells.","authors":"Hiroki Tsutsumi, Tomoki Chiba, Yuta Fujii, Takahide Matsushima, Tsuyoshi Kimura, Akinori Kanai, Akio Kishida, Yutaka Suzuki, Hiroshi Asahara","doi":"10.7554/eLife.104768","DOIUrl":"10.7554/eLife.104768","url":null,"abstract":"<p><p>Tendons and ligaments are crucial connective tissues linking bones and muscles, yet achieving full functional recovery after injury remains challenging. We investigated the characteristics of tendon stem/progenitor cells (TSPCs) by focusing on the declining tendon repair capacity with growth. Using single-cell RNA sequencing on Achilles tendon cells from 2- and 6-week-old mice, we identified <i>Cd55</i> and <i>Cd248</i> as novel surface antigen markers for TSPCs. Combining single-cell RNA sequencing with single-nucleus RNA and ATAC sequencing analyses revealed that <i>Cd55-</i> and <i>Cd248</i>-positive fractions in tendon tissue represent TSPCs, as confirmed by their expression of established TSPC markers, with this population decreasing at 6 weeks. We also identified candidate upstream transcription factors regulating these fractions. Functional analyses of isolated CD55/CD248-positive cells demonstrated high clonogenic potential and tendon differentiation capacity, forming functional tendon-like tissue in vitro. This study establishes CD55 and CD248 as novel TSPC surface antigens, potentially advancing tendon regenerative medicine and contributing to the development of new treatment strategies for tendon and ligament injuries.</p>","PeriodicalId":11640,"journal":{"name":"eLife","volume":"14 ","pages":""},"PeriodicalIF":6.4,"publicationDate":"2026-02-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12863719/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146104353","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Mixture discrimination training induces durable and generalizable olfactory learning independent of odorant structure and concentration. 混合辨别训练诱导持久和可概括的嗅觉学习独立于气味结构和浓度。
IF 6.4 1区 生物学 Q1 BIOLOGY Pub Date : 2026-02-02 DOI: 10.7554/eLife.102999
Xiaoyue Chang, Huibang Tan, Jiehui Niu, Kaiqi Yuan, Rui Chen, Wen Zhou

Previously, we showed that adult human olfaction retains plasticity in the unilateral processing of molecular chirality (Feng and Zhou, 2019). Using a similar unilateral discrimination protocol across three experiments with human adults (n = 96; 1295 sessions), we now reveal distinct patterns of specificity, generalization, and persistence in olfactory learning, independent of adaptation or task difficulty. Training with binary odor mixtures at varying ratios consistently produced durable gains that transferred across nostrils and generalized to novel mixtures differing in both structure and perceptual quality. Conversely, training with odor enantiomers or concentration differences yielded neither transfer nor generalization, and concentration discrimination learning was short-lived. These results indicate that mixture configural quality is a distinct olfactory attribute from chirality or relative concentration, and that discrimination learning engages plasticity at different stages of olfactory processing depending on the task-relevant attribute. Moreover, they identify mixture discrimination training as a promising strategy for rehabilitating smell loss and cultivating olfactory expertise.

之前,我们发现成人嗅觉在分子手性的单侧加工中保持可塑性(Feng and Zhou, 2019)。在三个成人实验中(n = 96; 1,295次),我们采用了类似的单边辨别协议,揭示了嗅觉学习的特异性、泛化和持久性的独特模式,独立于适应或任务难度。以不同比例的二元气味混合物进行训练,始终产生持久的收益,这种收益通过鼻孔传递,并推广到结构和感知质量不同的新混合物。相反,用气味对映体或浓度差异进行训练既不能产生迁移也不能产生泛化,而且浓度辨别学习是短暂的。这些结果表明,混合构型质量是不同于手性或相对浓度的嗅觉属性,辨别学习在嗅觉加工的不同阶段根据任务相关属性发挥可塑性。此外,他们认为混合辨别训练是恢复嗅觉丧失和培养嗅觉专业知识的一种有前途的策略。
{"title":"Mixture discrimination training induces durable and generalizable olfactory learning independent of odorant structure and concentration.","authors":"Xiaoyue Chang, Huibang Tan, Jiehui Niu, Kaiqi Yuan, Rui Chen, Wen Zhou","doi":"10.7554/eLife.102999","DOIUrl":"10.7554/eLife.102999","url":null,"abstract":"<p><p>Previously, we showed that adult human olfaction retains plasticity in the unilateral processing of molecular chirality (Feng and Zhou, 2019). Using a similar unilateral discrimination protocol across three experiments with human adults (n = 96; 1295 sessions), we now reveal distinct patterns of specificity, generalization, and persistence in olfactory learning, independent of adaptation or task difficulty. Training with binary odor mixtures at varying ratios consistently produced durable gains that transferred across nostrils and generalized to novel mixtures differing in both structure and perceptual quality. Conversely, training with odor enantiomers or concentration differences yielded neither transfer nor generalization, and concentration discrimination learning was short-lived. These results indicate that mixture configural quality is a distinct olfactory attribute from chirality or relative concentration, and that discrimination learning engages plasticity at different stages of olfactory processing depending on the task-relevant attribute. Moreover, they identify mixture discrimination training as a promising strategy for rehabilitating smell loss and cultivating olfactory expertise.</p>","PeriodicalId":11640,"journal":{"name":"eLife","volume":"15 ","pages":""},"PeriodicalIF":6.4,"publicationDate":"2026-02-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146104361","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
The representation of facial emotion expands from sensory to prefrontal cortex with development. 随着发育,面部情绪的表征从感觉皮层扩展到前额皮质。
IF 6.4 1区 生物学 Q1 BIOLOGY Pub Date : 2026-01-30 DOI: 10.7554/eLife.107636
Xiaoxu Fan, Abhishek Tripathi, Kelly Bijanki

Facial expression recognition develops rapidly during infancy and improves from childhood to adulthood. As a critical component of social communication, this skill enables individuals to interpret others' emotions and intentions. However, the brain mechanisms driving the development of this skill remain largely unclear due to the difficulty of obtaining data with both high spatial and temporal resolution from young children. By analyzing intracranial EEG data collected from childhood (5-10 years old) and post-childhood groups (13-55 years old), we find differential involvement of high-level brain area in processing facial expression information. For the post-childhood group, both the posterior superior temporal cortex (pSTC) and the dorsolateral prefrontal cortex (DLPFC) encode facial emotion features from a high-dimensional space. However, in children, the facial expression information is only significantly represented in the pSTC, not in the DLPFC. Furthermore, the encoding of complex emotions in pSTC is shown to increase with age. Taken together, young children rely more on low-level sensory areas than on the prefrontal cortex for facial emotion processing, suggesting that the prefrontal cortex matures with development to enable a full understanding of facial emotions, especially complex emotions that require social and life experience to comprehend.

面部表情识别在婴儿期发展迅速,从儿童期到成年期得到改善。作为社会沟通的重要组成部分,这种技能使个人能够理解他人的情绪和意图。然而,由于很难从幼儿身上获得高空间和时间分辨率的数据,推动这一技能发展的大脑机制在很大程度上仍不清楚。通过对儿童期(5 ~ 10岁)和儿童期后(13 ~ 55岁)儿童脑电数据的分析,我们发现高水平脑区参与面部表情信息处理的差异。对于儿童期后组,后颞上皮层(pSTC)和背外侧前额叶皮层(DLPFC)都从高维空间编码面部情绪特征。然而,在儿童中,面部表情信息仅在pSTC中有显著表征,而在DLPFC中没有显著表征。此外,pSTC中复杂情绪的编码随着年龄的增长而增加。综上所示,幼儿在处理面部情绪时更多地依赖于低级感觉区,而不是前额叶皮层,这表明前额叶皮层随着发育成熟,能够充分理解面部情绪,特别是需要社会和生活经验才能理解的复杂情绪。
{"title":"The representation of facial emotion expands from sensory to prefrontal cortex with development.","authors":"Xiaoxu Fan, Abhishek Tripathi, Kelly Bijanki","doi":"10.7554/eLife.107636","DOIUrl":"10.7554/eLife.107636","url":null,"abstract":"<p><p>Facial expression recognition develops rapidly during infancy and improves from childhood to adulthood. As a critical component of social communication, this skill enables individuals to interpret others' emotions and intentions. However, the brain mechanisms driving the development of this skill remain largely unclear due to the difficulty of obtaining data with both high spatial and temporal resolution from young children. By analyzing intracranial EEG data collected from childhood (5-10 years old) and post-childhood groups (13-55 years old), we find differential involvement of high-level brain area in processing facial expression information. For the post-childhood group, both the posterior superior temporal cortex (pSTC) and the dorsolateral prefrontal cortex (DLPFC) encode facial emotion features from a high-dimensional space. However, in children, the facial expression information is only significantly represented in the pSTC, not in the DLPFC. Furthermore, the encoding of complex emotions in pSTC is shown to increase with age. Taken together, young children rely more on low-level sensory areas than on the prefrontal cortex for facial emotion processing, suggesting that the prefrontal cortex matures with development to enable a full understanding of facial emotions, especially complex emotions that require social and life experience to comprehend.</p>","PeriodicalId":11640,"journal":{"name":"eLife","volume":"14 ","pages":""},"PeriodicalIF":6.4,"publicationDate":"2026-01-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12858165/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146084917","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Causal evidence for a domain-specific role of left superior frontal sulcus in human perceptual decision-making. 左额上沟在人类知觉决策中特定领域作用的因果证据。
IF 6.4 1区 生物学 Q1 BIOLOGY Pub Date : 2026-01-30 DOI: 10.7554/eLife.94576
Miguel Barretto-Garcia, Marcus Grueschow, Marius Moisa, Rafael Polania, Christian C Ruff

Humans and animals can flexibly choose their actions based on different information, ranging from objective states of the environment (e.g., apples are bigger than cherries) to subjective preferences (e.g., cherries are tastier than apples). Whether the brain instantiates these different choices by recruiting either specialised or shared neural circuitry remains debated. Specifically, domain-general accounts of prefrontal cortex (PFC) function propose that prefrontal areas flexibly process either perceptual or value-based evidence depending on what is required for the present choice, whereas domain-specific theories posit that PFC sub-areas, such as the left superior frontal sulcus (SFS), selectively integrate evidence relevant for perceptual decisions. Here, we comprehensively test the functional role of the left SFS for choices based on perceptual- and value-based evidence, by combining functional magnetic resonance imaging with a behavioural paradigm, computational modelling, and transcranial magnetic stimulation (TMS). Confirming predictions by a sequential sampling model, we show that TMS-induced excitability reduction of the left SFS selectively changes the processing of decision-relevant perceptual information and associated neural processes. In contrast, value-based decision-making and associated neural processes remain unaffected. This specificity of SFS function is evident at all levels of analysis (behavioural, computational, and neural, including functional connectivity), demonstrating that the left SFS causally contributes to evidence integration for perceptual but not value-based decisions.

人类和动物可以根据不同的信息灵活地选择他们的行为,从客观的环境状态(例如,苹果比樱桃大)到主观的偏好(例如,樱桃比苹果更美味)。大脑是否通过招募专门的或共享的神经回路来实例化这些不同的选择仍然存在争议。具体来说,关于前额叶皮层(PFC)功能的领域通用理论认为,前额叶区域根据当前选择的需要灵活地处理感知或基于价值的证据,而领域特定理论则认为,前额叶皮层的子区域,如左额上沟(SFS),有选择地整合与感知决策相关的证据。在这里,我们通过将功能磁共振成像与行为范式、计算模型和经颅磁刺激(TMS)相结合,综合测试了基于感知和价值证据的左侧SFS在选择中的功能作用。结果表明,经颅磁刺激诱导的左SFS兴奋性降低选择性地改变了与决策相关的感知信息和相关神经过程的处理。相比之下,基于价值的决策和相关的神经过程不受影响。SFS功能的这种特异性在所有层次的分析(行为、计算和神经,包括功能连接)中都很明显,这表明左侧SFS对知觉决策的证据整合有因果关系,而不是基于价值的决策。
{"title":"Causal evidence for a domain-specific role of left superior frontal sulcus in human perceptual decision-making.","authors":"Miguel Barretto-Garcia, Marcus Grueschow, Marius Moisa, Rafael Polania, Christian C Ruff","doi":"10.7554/eLife.94576","DOIUrl":"10.7554/eLife.94576","url":null,"abstract":"<p><p>Humans and animals can flexibly choose their actions based on different information, ranging from objective states of the environment (e.g., apples are bigger than cherries) to subjective preferences (e.g., cherries are tastier than apples). Whether the brain instantiates these different choices by recruiting either specialised or shared neural circuitry remains debated. Specifically, domain-general accounts of prefrontal cortex (PFC) function propose that prefrontal areas flexibly process either perceptual or value-based evidence depending on what is required for the present choice, whereas domain-specific theories posit that PFC sub-areas, such as the left superior frontal sulcus (SFS), selectively integrate evidence relevant for perceptual decisions. Here, we comprehensively test the functional role of the left SFS for choices based on perceptual- and value-based evidence, by combining functional magnetic resonance imaging with a behavioural paradigm, computational modelling, and transcranial magnetic stimulation (TMS). Confirming predictions by a sequential sampling model, we show that TMS-induced excitability reduction of the left SFS selectively changes the processing of decision-relevant perceptual information and associated neural processes. In contrast, value-based decision-making and associated neural processes remain unaffected. This specificity of SFS function is evident at all levels of analysis (behavioural, computational, and neural, including functional connectivity), demonstrating that the left SFS causally contributes to evidence integration for perceptual but not value-based decisions.</p>","PeriodicalId":11640,"journal":{"name":"eLife","volume":"13 ","pages":""},"PeriodicalIF":6.4,"publicationDate":"2026-01-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12858167/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146084979","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
期刊
eLife
全部 Acc. Chem. Res. ACS Applied Bio Materials ACS Appl. Electron. Mater. ACS Appl. Energy Mater. ACS Appl. Mater. Interfaces ACS Appl. Nano Mater. ACS Appl. Polym. Mater. ACS BIOMATER-SCI ENG ACS Catal. ACS Cent. Sci. ACS Chem. Biol. ACS Chemical Health & Safety ACS Chem. Neurosci. ACS Comb. Sci. ACS Earth Space Chem. ACS Energy Lett. ACS Infect. Dis. ACS Macro Lett. ACS Mater. Lett. ACS Med. Chem. Lett. ACS Nano ACS Omega ACS Photonics ACS Sens. ACS Sustainable Chem. Eng. ACS Synth. Biol. Anal. Chem. BIOCHEMISTRY-US Bioconjugate Chem. BIOMACROMOLECULES Chem. Res. Toxicol. Chem. Rev. Chem. Mater. CRYST GROWTH DES ENERG FUEL Environ. Sci. Technol. Environ. Sci. Technol. Lett. Eur. J. Inorg. Chem. IND ENG CHEM RES Inorg. Chem. J. Agric. Food. Chem. J. Chem. Eng. Data J. Chem. Educ. J. Chem. Inf. Model. J. Chem. Theory Comput. J. Med. Chem. J. Nat. Prod. J PROTEOME RES J. Am. Chem. Soc. LANGMUIR MACROMOLECULES Mol. Pharmaceutics Nano Lett. Org. Lett. ORG PROCESS RES DEV ORGANOMETALLICS J. Org. Chem. J. Phys. Chem. J. Phys. Chem. A J. Phys. Chem. B J. Phys. Chem. C J. Phys. Chem. Lett. Analyst Anal. Methods Biomater. Sci. Catal. Sci. Technol. Chem. Commun. Chem. Soc. Rev. CHEM EDUC RES PRACT CRYSTENGCOMM Dalton Trans. Energy Environ. Sci. ENVIRON SCI-NANO ENVIRON SCI-PROC IMP ENVIRON SCI-WAT RES Faraday Discuss. Food Funct. Green Chem. Inorg. Chem. Front. Integr. Biol. J. Anal. At. Spectrom. J. Mater. Chem. A J. Mater. Chem. B J. Mater. Chem. C Lab Chip Mater. Chem. Front. Mater. Horiz. MEDCHEMCOMM Metallomics Mol. Biosyst. Mol. Syst. Des. Eng. Nanoscale Nanoscale Horiz. Nat. Prod. Rep. New J. Chem. Org. Biomol. Chem. Org. Chem. Front. PHOTOCH PHOTOBIO SCI PCCP Polym. Chem.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:604180095
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1