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Atlas-based global and local RF segmentation of head and neck organs on multimodal MRI images 基于atlas的多模态MRI图像头颈部器官全局和局部射频分割
S. Urbán, A. Tanács
Organ segmentation in the head and neck region is very challenging due to the large variability of the shape and size of organs among patients. Accurate and consistent segmentation of the organ-at-risk (OAR) regions is important in radiation treatment planning. This paper presents a fully automated atlas- and learning-based method for segmenting three OARs (trachea, spinal cord, parotid glands) in multimodal head-and-neck MRI images. The proposed method consists of three main parts. First, a probabilistic atlas is generated. Then, a Random Forest classifier that incorporates the atlas as well as various image features of the multimodal images is applied globally and locally in order to handle local variations. The method was trained and tested on 30 multimodal MRI examinations including T2w, T1w and T1w fat saturated images. Manually defined contours were used as reference. The presented results show good correlation with the reference using DICE similarity measurements. Based on these preliminary results the proposed method can be adapted to other organs of the head-and-neck region.
由于患者器官形状和大小的巨大差异,头颈部器官分割是非常具有挑战性的。准确和一致的器官危险(OAR)区域分割是重要的放射治疗计划。本文提出了一种全自动的基于图谱和学习的方法,用于分割多模态头颈部MRI图像中的三个桨(气管,脊髓,腮腺)。该方法主要由三个部分组成。首先,生成概率图谱。然后,结合地图集和多模态图像的各种图像特征的随机森林分类器在全局和局部应用,以处理局部变化。该方法在30个多模态MRI检查中进行了训练和测试,包括T2w, T1w和T1w脂肪饱和图像。使用手动定义的轮廓作为参考。使用DICE相似度测量,所得结果与参考文献具有良好的相关性。基于这些初步结果,提出的方法可以适用于头颈部的其他器官。
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引用次数: 7
Towards hardware-friendly retinex algorithms 对硬件友好的视网膜算法
Nikola Banić, S. Lončarić
Retinex theory was among the first to introduce a model for simultaneous brightness adjustment and removal of illumination influence on image colors by supposedly emulating some aspects of the human visual system's behaviour. The main idea of most Retinex methods is to readjust color channel values of individual pixels with respect to their local white references. Recently the Smart Light Random Memory Sprays Retinex (SLRMSR) method with a O(1) per-pixel complexity was proposed. Although theoretically fast, like with many other Retinex methods, the problem is that its local pixel sampling scheme and some of its local maximum calculation structures common to other Retinex methods as well are not particularly hardware-friendly. In this paper a reduced sampling scheme and an approximated local maxima calculation are proposed and included into a modified SLRMSR. While the resulting images are visually very similar to the ones obtained by the original SLRMSR, the modified SLRMSR is structurally simpler and more hardware friendly. The results are presented and discussed.
视网膜理论是第一个引入同时调节亮度和消除光照对图像颜色影响的模型,通过模拟人类视觉系统行为的某些方面。大多数Retinex方法的主要思想是重新调整单个像素相对于其局部白色参考的颜色通道值。近年来,提出了一种复杂度为0(1)的智能光随机记忆喷雾(SLRMSR)方法。虽然理论上快速,像许多其他Retinex方法一样,问题是它的局部像素采样方案和一些局部最大值计算结构与其他Retinex方法一样,不是特别硬件友好。本文提出了一种简化的采样方案和一种近似的局部极大值计算方法,并将其纳入改进的SLRMSR中。虽然生成的图像在视觉上与原始SLRMSR获得的图像非常相似,但修改后的SLRMSR在结构上更简单,并且对硬件更友好。给出了实验结果并进行了讨论。
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引用次数: 4
Analytic spectrum as a tool for time-frequency signal analysis 分析频谱作为时频信号分析的工具
V. Antsiperov
The report substantiates the concept of the analytic spectrum and the synthesis of time-frequency representations of signals based on it. A number of properties of the analytic spectrum are considered and their comparison with the corresponding properties of the analytic signal is carried out. On the basis of this comparison, key features of similarity and dissimilarity between these dual concepts are formulated. The report discusses the relation between the analytic spectra of the local past and local future of the signal with the Page and Levin instantaneous spectra concepts. The report also presents the relation of analytic spectra of the signal's local past and future with the popular quadratic cone-shaped (Zhao-Atlas-Marks) time-frequency representations.
该报告证实了分析频谱的概念和在此基础上合成信号的时频表示。考虑了解析谱的一些性质,并将它们与解析信号的相应性质进行了比较。在此比较的基础上,提出了这两个二元概念的相似性和差异性的关键特征。本文用Page和Levin的瞬时谱概念讨论了信号局部过去和局部未来的解析谱之间的关系。本文还介绍了信号局部过去和未来的解析谱与流行的二次锥形(Zhao-Atlas-Marks)时频表示的关系。
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引用次数: 1
Door detection in images of 3D scenes in an electronic travel aid for the blind 盲人电子旅行辅助设备三维场景图像中的门检测
P. Skulimowski, Mateusz Owczarek, P. Strumiłło
In this paper we propose a fast method for detecting doors in images of 3D scenes. First, the equation estimating the orientation and location of the ground surface is computed. This information is used in further processing steps of the algorithm. Then, the edge image is calculated (using the Canny edge detector) and line segments justifying predefined conditions are searched for by applying the Probabilistic Hough Transform method. Pairs of parallel line segments perpendicular to the ground surface located at a distance range 80–110 cm are identified. The detection performance has been also enhanced by detecting door handles. The proposed method was successfully verified on the recorded indoor RGB-D video sequences acquired by a vision based Electronic Travel Aid (ETA) for the blind. The achieved door detection performance for the tested sequences is at a level of 63% for sensitivity and 84% for positive predictivity values.
本文提出了一种快速检测三维场景图像中的门的方法。首先,计算了地表方位和位置的估计方程。该信息用于算法的进一步处理步骤。然后,计算边缘图像(使用Canny边缘检测器),并通过应用概率霍夫变换方法搜索证明预定义条件的线段。在80-110 cm的距离范围内确定了垂直于地面的平行线段对。检测门把手也提高了检测性能。利用基于视觉的盲人电子旅行辅助系统(ETA)采集的室内RGB-D视频序列,成功验证了该方法的有效性。测试序列的门检测性能达到63%的灵敏度和84%的阳性预测值。
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引用次数: 5
Efficient texture regularity estimation for second order statistical descriptors 二阶统计描述符纹理规则性的有效估计
Attila Tiba, B. Harangi, A. Hajdu
Co-occurrence matrices as sources of second order statistical descriptors are commonly used in texture classification tasks. To generate such a matrix, we need a position vector to check possible intensity frequencies in its endpoints. In this paper, we propose an efficient algorithm to locate such position vectors according which the pattern of the texture repeats and thus, the descriptors (Haralick features) derived from the co-occurrence matrix are capable to characterize the regularity of the pattern. The essence of our approach is to look for vectors that span well-approximating grids defined by reference points obtained by quantizing the input image. To extract such grids we use the LLL algorithm, which has a polynomial running time. Thus, we have a much more efficient solution than e.g. a brute force based search. Our results show that the proposed approach is capable to suggest position vectors for an efficient co-occurrence matrix based texture analysis.
共现矩阵作为二阶统计描述符的来源,在纹理分类中得到了广泛的应用。为了生成这样的矩阵,我们需要一个位置向量来检查其端点可能的强度频率。在本文中,我们提出了一种有效的算法来定位这些位置向量,根据这些位置向量,纹理的模式重复,从而,从共现矩阵中导出的描述子(Haralick特征)能够表征模式的规律性。我们的方法的本质是寻找跨越由量化输入图像获得的参考点定义的近似网格的向量。为了提取这样的网格,我们使用LLL算法,它的运行时间是多项式。因此,我们有一个比暴力搜索更有效的解决方案。结果表明,该方法能够为有效的基于共现矩阵的纹理分析提供位置向量。
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引用次数: 1
Decision support system for the diagnosis of neurological disorders based on gaze tracking 基于注视跟踪的神经系统疾病诊断决策支持系统
David Kupas, B. Harangi, Gyorgy Czifra, G. Andrassy
Current diagnosis of neurological disorders is an expensive and time-consuming task. Our goal is to make this procedure easier and more accurate using a digital eye scanner. Our system can help in making diagnoses, assists in the practice and shortens the time needed to find the appropriate treatment. First and foremost we collect all important visual effects in the field of neurological examination and create a video to make possible the testing of the eye movement of the patient during the video. Their gaze data is collected by an appropriate eye tracker, then we analyze the gaze information in order to evaluate the mental state of the patient using machine learning based algorithms. According to the experimental results, our proposed technique can separate the healthy and ill patients from each other using their gaze data.
目前对神经系统疾病的诊断是一项昂贵且耗时的任务。我们的目标是使用数字眼扫描仪使这个过程更容易,更准确。我们的系统可以帮助诊断,协助实践,缩短所需的时间找到适当的治疗。首先,我们收集了神经学检查领域所有重要的视觉效果,并制作了一个视频,以便在视频中测试患者的眼球运动。通过适当的眼动仪收集他们的凝视数据,然后使用基于机器学习的算法分析凝视信息以评估患者的精神状态。实验结果表明,我们提出的方法可以利用患者的注视数据对健康患者和患病患者进行区分。
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引用次数: 3
Gaussian mixture background for salient object detection 高斯混合背景显著目标检测
Z. Su, Hong Zheng, Guorui Song
Salient object detection has become a valuable tool in image processing. In this paper, we propose a novel approach to get full-resolution saliency maps. The input image is segmented into superpixels, each of them presents an irregular but homogenous area of the image thus can be treated as an image unit. Intuitively, superpixels touching the image borders will have the potential to capture the background information. Therefore, pixels belong to those superpixels are collected as background samples to train a Gaussian mixture model. The saliency of each superpixel is then defined by computing the weighted probability density of the Gaussian mixture model followed by an enhancement and smoothness step. At the end, a dense conditional random field based refinement tool or cellular automata is selected by an adaptive threshold to remove the false salient regions or find other potential saliency regions to get a more accurate result in pixel-level. We compare our method to five saliency detection algorithms which are classic or similar to ours but published in recent years on a commonly used challenging dataset ECSSD. Experiments show that our approach outperforms others well.
显著目标检测已成为图像处理的重要工具。本文提出了一种获得全分辨率显著性图的新方法。输入图像被分割成多个超像素,每个超像素代表图像的一个不规则但均匀的区域,因此可以作为一个图像单元。直观地说,接触图像边界的超像素将有可能捕获背景信息。因此,收集属于这些超像素的像素作为背景样本来训练高斯混合模型。然后通过计算高斯混合模型的加权概率密度来定义每个超像素的显著性,然后进行增强和平滑步骤。最后,通过自适应阈值选择基于密集条件随机场的细化工具或元胞自动机,去除虚假显著区域或寻找其他潜在显著区域,在像素级上得到更准确的结果。我们将我们的方法与五种显著性检测算法进行比较,这些算法是经典的或与我们的算法相似的,但近年来发表在一个常用的具有挑战性的数据集ECSSD上。实验表明,我们的方法优于其他方法。
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引用次数: 2
Dental age estimation from panoramic X-ray images using statistical models 利用统计模型从全景x射线图像估计牙齿年龄
Luka Cular, Mia Tomaic, M. Subašić, T. Saric, Viktorija Sajkovic, M. Vodanović
This paper presents an application of computer vision methods to dental age estimation based on the lower third right molar in panoramic X-ray images. For this purpose, two statistical computer vision models are adjusted and applied: Active Shape Model and Active Appearance Model. Both models use shape and appearance of the object to find the outer contour, with the only difference being in the way appearance is used. Statistical models are used to extract features describing the selected tooth, and neural network is used to provide dental age estimation using the features as input. Our own dataset was created, consisting of panoramic X-ray images with known age. A manual segmentation of the selected tooth has been performed for each image in the training set, and the obtained outer contours were used to train both models. Promising preliminary results are presented.
本文介绍了计算机视觉方法在全景x射线图像中基于右下三磨牙的牙龄估计中的应用。为此,调整和应用了两种统计计算机视觉模型:主动形状模型和主动外观模型。两种模型都使用物体的形状和外观来寻找外部轮廓,唯一的区别是外观的使用方式。使用统计模型提取描述所选牙齿的特征,并使用神经网络将特征作为输入提供牙齿年龄估计。我们创建了自己的数据集,由已知年龄的全景x射线图像组成。对训练集中的每个图像进行人工分割,得到的外轮廓用于训练两个模型。提出了有希望的初步结果。
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引用次数: 10
Generation and evaluation of an MRI statistical organ atlas in the head-neck region 头颈部MRI统计器官图谱的生成与评价
A. Tanács
Segmenting organs in MRI images is a common task in medical practice where image registration techniques can be used in the preprocessing steps to reduce the required interactivity. This is especially true in the head and neck region where large variability of shape and size of organs is present among patients. When an image database of MRI images and segmented organ contours are available, these can be used to build probability atlases in a selected reference frame. The atlas data can then be transformed to the coordinate systems of studies to be segmented applying the transformations in the inverse direction. In this paper two registration approaches for atlas building are evaluated and compared. Separate atlases for 6 organs (spinal cord, trachea, carotis, jugularis, parotis, sternocleidomastoid muscle — SCM) are built from 15 MRI T2 weighted Fast Relaxation Fast Spin Echo (FRFSE) studies using expert segmented organ contours and evaluated using further 15 such studies. The evaluation takes into account the overlap of the expert segmented organ regions and the transformed probability atlases, the discrimination capabilities of the atlases in the carotis-jugularis region, and the errors induced by the inverse registration approach. The results show the superiority of the multiresolution B-Spline transformation implemented by the elastix package against a less flexible, composite transformation formed using scaled rigid + single resolution B-Spline approach. The presented framework can be used for e.g., determining regions of interests (ROIs) as a preprocessing step of learning based fully automatic segmentation approaches.
在医学实践中,分割MRI图像中的器官是一项常见的任务,其中图像配准技术可以用于预处理步骤,以减少所需的交互性。这在头颈部尤其如此,因为患者的器官形状和大小存在很大的差异。当MRI图像和分割器官轮廓的图像数据库可用时,这些可用于在选定的参考框架中构建概率地图集。然后,应用反向转换将地图集数据转换为待分割研究的坐标系统。本文对地图集建立的两种配准方法进行了评价和比较。使用专家分割的器官轮廓,通过15个MRI T2加权快速松弛快速自旋回波(FRFSE)研究建立了6个器官(脊髓、气管、颈动脉、颈动脉、腮腺炎、胸锁乳突肌- SCM)的独立地图集,并使用进一步的15个此类研究进行了评估。该方法考虑了专家分割的器官区域与变换后的概率图谱的重叠程度、概率图谱在颈动脉区域的识别能力以及逆配准方法引起的误差。结果表明,采用弹性包实现的多分辨率b样条变换优于采用尺度刚性+单分辨率b样条方法形成的较不灵活的复合变换。所提出的框架可用于例如,确定兴趣区域(roi)作为基于学习的全自动分割方法的预处理步骤。
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引用次数: 1
Masking in chrominance channels of natural images — Data, analysis, and prediction 自然图像的色度通道中的掩蔽。数据、分析和预测
V. Kitanovski, Marius Pedersen
This paper addresses the visual masking that occurs in the chrominance channels of natural images. We present results from a psychophysical experiment designed to obtain local thresholds of just noticeable log-Gabor distortion in the Cr and Cb channels of natural images. We analyzed the data and investigated the correlation between several low-level image features and the collected thresholds. As expected, features like variance, entropy, or edge density were correlated relatively high with the thresholds. We evaluated the performance of linear and non-linear regression (using neural networks and support vector machines) for thresholds prediction from multiple global image features; we also fitted a modified Watson-Solomon's computational model (based on log-Gabor features) for thresholds prediction. The evaluation showed that neural networks and support vector machines are most suitable for thresholds prediction. The computational model performed reasonably well, with further prospects of its improvement.
本文讨论了在自然图像的色度通道中发生的视觉掩蔽。我们展示了一项心理物理实验的结果,该实验旨在获得自然图像的Cr和Cb通道中仅显着的log-Gabor失真的局部阈值。我们分析了数据,并研究了几个低水平图像特征与收集的阈值之间的相关性。正如预期的那样,方差、熵或边缘密度等特征与阈值的相关性相对较高。我们评估了线性和非线性回归(使用神经网络和支持向量机)对多个全局图像特征的阈值预测的性能;我们还拟合了一个改进的Watson-Solomon计算模型(基于log-Gabor特征)用于阈值预测。结果表明,神经网络和支持向量机最适合用于阈值预测。该计算模型表现相当好,并有进一步改进的前景。
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引用次数: 3
期刊
Proceedings of the 10th International Symposium on Image and Signal Processing and Analysis
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