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Daphnids can safeguard the use of alternative bioassays to the acute fish toxicity test: A focus on neurotoxicity. 水蚤可以保障使用替代生物测定法的急性鱼类毒性试验:重点在神经毒性。
IF 3.6 4区 环境科学与生态学 Q2 ENVIRONMENTAL SCIENCES Pub Date : 2025-01-21 DOI: 10.1093/etojnl/vgaf014
Christoph Schür, Martin Paparella, Christopher Faßbender, Gilly Stoddart, Marco Baity Jesi, Kristin Schirmer

Assessment of potential impacts of chemicals on the environment traditionally involves regulatory standard data requirements for acute aquatic toxicity testing using algae, daphnids and fish (e.g., OECD test guidelines (TG) 201, 202, and 203, respectively), representing different trophic levels. In line with the societal goal to replace or reduce vertebrate animal testing, alternative bioassays were developed to replace testing with fish: the fish cell line RTgill-W1 acute toxicity assay (OECD TG249) and the zebrafish embryo acute toxicity test (zFET, OECD TG236). However, previous studies revealed the lower sensitivity of the RTgill-W1 cell line assay and zFET for some neurotoxic chemicals and allyl alcohol, which is presumably biotransformed in fish to the more toxic acrolein (which is predicted well through the cell line assay). To provide an additional alternative to acute fish toxicity, in this study, we analyzed historic ecotoxicity data for fish and daphnids from the EnviroTox Database. We found a considerable variability in acute fish LC50 and acute daphnids EC50 values, particularly for neurotoxic chemicals. Comparing sensitivity of these taxonomic groups according to different neurotoxicity classification schemes indicates that fish rarely represent the most sensitive trophic level of the two. Exceptions here most prominently include a few cyclodiene compounds, which are no longer marketed, and a chemical group that could be identified through structural alerts. Moreover, daphnids are more sensitive than fish to acrolein. This analysis highlights the potential of the Daphnia acute toxicity test, which is usually a standard regulatory data requirement, in safeguarding the environmental protection level provided by the RTgill-W1 cell line assay and the zFET. This research, rooted in decades of efforts to replace the fish acute toxicity test, shifts the focus from predicting fish toxicity 1-to-1 to emphasizing the protectiveness of alternative methods, paving the way for further eliminating vertebrate tests in environmental toxicology.

传统上,评估化学品对环境的潜在影响涉及使用代表不同营养水平的藻类、水蚤和鱼类进行急性水生毒性测试的监管标准数据要求(例如,经合组织测试指南(TG) 201、202和203)。为了符合取代或减少脊椎动物试验的社会目标,开发了替代生物测定法来取代鱼类试验:鱼细胞系rtggill - w1急性毒性试验(OECD TG249)和斑马鱼胚胎急性毒性试验(zFET, OECD TG236)。然而,先前的研究表明,RTgill-W1细胞系试验和zFET对一些神经毒性化学物质和烯丙醇的敏感性较低,烯丙醇可能在鱼体内被生物转化为毒性更强的丙烯醛(通过细胞系试验可以很好地预测到这一点)。为了提供鱼类急性毒性的另一种选择,在本研究中,我们分析了EnviroTox数据库中鱼类和水蚤的历史生态毒性数据。我们发现急性鱼类LC50和急性水蚤EC50值有相当大的差异,特别是对神经毒性化学物质。根据不同的神经毒性分类方案比较这些分类群的敏感性表明,鱼类很少代表两者中最敏感的营养水平。这里最突出的例外包括一些不再销售的环二烯化合物,以及一种可以通过结构警报识别的化学基团。此外,水蚤对丙烯醛的敏感性高于鱼类。这一分析突出了水蚤急性毒性试验的潜力,这通常是一个标准的监管数据要求,在保护RTgill-W1细胞系试验和zFET提供的环境保护水平方面。这项研究立足于几十年来替代鱼类急性毒性试验的努力,将重点从1:1预测鱼类毒性转移到强调替代方法的保护作用,为进一步消除环境毒理学中的脊椎动物试验铺平了道路。
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引用次数: 0
ACCUMULATION OF TRACE ELEMENTS IN SOIL AND FAUNA WITHIN A SITE HISTORICALLY CONTAMINATED WITH COAL COMBUSTION RESIDUES. 在历史上被煤燃烧残留物污染的地点,土壤和动物中微量元素的积累。
IF 3.6 4区 环境科学与生态学 Q2 ENVIRONMENTAL SCIENCES Pub Date : 2025-01-20 DOI: 10.1093/etojnl/vgaf020
Kelly E Holland, Tracey D Tuberville, James C Beasley

Legacy contaminants tied to energy production are a worldwide concern. Coal combustion residues (CCRs) contain high concentrations of potentially toxic trace elements such as arsenic (As), mercury (Hg), and selenium (Se), which can persist for decades after initial contamination. CCR disposal methods, including aquatic settling basins and landfills, can facilitate environmental exposure through intentional and accidental releases. Wildlife exposed to CCRs can experience numerous deleterious effects, such as on development, reproduction, and survival. In the current study, we quantified and compared concentrations of As, Hg, Se, and strontium (Sr) within soils and target fauna (three vertebrate and three invertebrate taxa) from a CCR-contaminated site and a reference site within the U.S. Department of Energy's Savannah River Site, South Carolina, USA. Our objectives were to 1) compare current concentrations of tested elements in soil and resident fauna to levels from our reference site, 2) assess natural attenuation of elements in soils by comparing current concentrations to historic levels, and 3) evaluate the biomagnification potential of the elements measured via body burden and trophic position correlations among fauna. Element concentrations were higher in contaminated soils than reference soils; however, concentrations in 2022 were unchanged from concentrations measured in 2003, suggesting no natural attenuation of tested elements. Additionally, target fauna had elevated As, Se, and Sr levels in comparison to reference samples. A positive correlation was observed in southern toads between Sr concentrations and trophic position, as assessed by nitrogen stable isotope ratios, suggesting potential for biomagnification of Sr within our study system. Collectively, our results demonstrate that legacy contaminants are still present and bioaccumulate in a diversity of taxa in a CCR-contaminated site that has not received effluents in over 50 years, suggesting monitoring programs in CCR-contaminated sites should be maintained long term in the absence of remediation.

与能源生产有关的遗留污染物是全世界关注的问题。煤燃烧残留物(CCRs)含有高浓度的潜在有毒微量元素,如砷(as)、汞(Hg)和硒(Se),这些元素在最初污染后可持续存在数十年。CCR的处理方法,包括水生沉降池和垃圾填埋场,可以通过故意和意外的排放促进环境暴露。接触ccr的野生动物会受到许多有害影响,如发育、繁殖和生存。在当前的研究中,我们量化并比较了来自美国南卡罗来纳州萨凡纳河遗址的ccr污染地点和参考地点的土壤和目标动物(三种脊椎动物和三种无脊椎动物分类群)中As、Hg、Se和锶(Sr)的浓度。我们的目标是:1)将土壤和动物中测试元素的当前浓度与参考地点的水平进行比较;2)通过比较当前浓度与历史水平来评估土壤中元素的自然衰减;3)通过动物的身体负担和营养位置相关性来评估元素的生物放大潜力。污染土壤中元素含量高于对照土壤;然而,2022年的浓度与2003年测量的浓度没有变化,这表明被测元素没有自然衰减。此外,与参考样品相比,目标动物群的砷、硒和锶含量较高。根据氮稳定同位素比值,南方蟾蜍体内的锶浓度与营养位置呈正相关,这表明在我们的研究系统中,锶有可能被生物放大。总的来说,我们的研究结果表明,遗留污染物仍然存在,并在超过50年没有接收废水的ccr污染场地的多样性分类群中积累,这表明在没有修复的情况下,ccr污染场地的监测计划应该长期维持。
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引用次数: 0
Runoff and accumulation of microplastics derived from polymer-coated fertilizer in japanese paddy fields. 日本稻田聚合物包膜肥料产生的微塑料径流和积累。
IF 3.6 4区 环境科学与生态学 Q2 ENVIRONMENTAL SCIENCES Pub Date : 2025-01-20 DOI: 10.1093/etojnl/vgaf021
Naoya Katsumi, Takasei Kusube

Polymer-coated fertilizers, widely used in rice cultivation in Japan, contribute to reactive nitrogen management and agricultural productivity but are a source of microplastics in the environment. Here, we investigated microplastics derived from polymer-coated fertilizer (microcapsule) runoff in Japanese paddy fields at 38 sites to quantitatively assess the behavior of microcapsules in paddy fields, and to estimate the total amount of runoff and accumulation in Japan. We also examined the factors causing variations in the amount of runoff among paddy fields. Between 61 and 100% of microcapsule runoff during the irrigation period occurred between puddling and rice transplanting, with concentrations ranging from 2 to 482 mg/m2 in paddy fields. Water management practices and wind direction and speed explained the difference in runoff between plots. The total amount of microcapsules discharged from Japanese paddy fields during the irrigation season was estimated to be between 17 and 6,291 t (median 1,157 t) from the loads obtained in this study. According to fertilizer statistics and our results, total microcapsule accumulation on agricultural land in Japan was estimated to be 75,623 t. These results suggest that paddy fields in Japan will remain a long-term source of marine microplastics.

日本水稻种植中广泛使用的聚合物包膜肥料有助于活性氮管理和农业生产力,但也是环境中微塑料的来源之一。在此,我们研究了日本稻田中38个地点的聚合物包膜肥料(微胶囊)径流产生的微塑料,以定量评估微胶囊在稻田中的行为,并估计日本的径流和累积总量。我们还研究了稻田间径流量变化的因素。灌溉期微胶囊径流61% ~ 100%发生在灌浆和插秧之间,稻田微胶囊径流浓度在2 ~ 482 mg/m2之间。水管理实践和风向和风速解释了不同地块间径流的差异。根据本研究获得的负荷,日本稻田在灌溉季节排放的微胶囊总量估计在17至6291 t(中位数为1157 t)之间。根据肥料统计和我们的研究结果,日本农业用地上的微胶囊累积总量估计为75,623 t。这些结果表明,日本稻田仍将是海洋微塑料的长期来源。
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引用次数: 0
Transcriptomic response of an algal species (raphidocelis subcapitata) exposed to 22 per- and polyfluoroalkyl substances. 一种藻类(raphidocelis subcapitata)暴露于22种单氟烷基和多氟烷基物质的转录组反应。
IF 3.6 4区 环境科学与生态学 Q2 ENVIRONMENTAL SCIENCES Pub Date : 2025-01-20 DOI: 10.1093/etojnl/vgaf022
Kevin M Flynn, Kendra Bush, Jenna Cavallin, Monique Hazemi, Alex Kasparek, Peter Schumann, Daniel L Villeneuve

Per- and polyfluoroalkyl substances (PFAS) are a large class of chemicals of concern for both human and environmental health because of their ubiquitous presence in the environment, persistence, and potential toxicological effects. Despite this, ecological hazard data are limited to a small number of PFAS even though there are over 4000 identified PFAS. Traditional toxicity testing will likely be inadequate to generate necessary hazard information for risk assessment. Therefore, the present study investigated the utility of using transcriptomic points of departure (tPODs) for informing PFAS algal toxicity. Raphidocelis subcapitata, a freshwater green algal species, were exposed for 24 hours in 96 well microplates to multiple concentrations of 22 different PFAS. Following exposure, RNA was extracted, and the transcriptome was evaluated by RNA sequencing followed by concentration response modeling to determine a tPOD for each PFAS. PFAS tPODs, based upon measured concentrations, ranged from 0.9 µg/L for perfluorotridecanoic acid to 1 mg/L for perfluorononanoic acid. These values derived from R. subcapitata exposures were compared to published hazard benchmarks from other taxa (larval fathead minnow and Daphnia magna) and in vitro data. While R. subcapitata was generally more sensitive to the tested PFAS than previously tested taxa and in vitro assays, the algal tPODs were, on average, three orders magnitude greater than the maximum concentrations of PFAS detected in Great Lakes tributaries. This high throughput transcriptomics assay with algae is a promising new approach method for an ecologically relevant, tiered hazard evaluation strategy.

全氟烷基和多氟烷基物质(PFAS)是一类对人类和环境健康都令人关注的化学品,因为它们在环境中无处不在、具有持久性和潜在的毒理学影响。尽管如此,尽管已确定的PFAS超过4000种,但生态危害数据仅限于少数PFAS。传统的毒性试验可能不足以为风险评估提供必要的危害信息。因此,本研究调查了使用转录组出发点(tpod)来通知PFAS藻类毒性的效用。将淡水绿藻Raphidocelis subcapitata置于96孔微孔板中,暴露于22种不同浓度的PFAS中24小时。暴露后,提取RNA,通过RNA测序和浓度响应建模来评估转录组,以确定每种PFAS的tPOD。根据测量的浓度,PFAS tPODs的范围从全氟三烷酸的0.9微克/升到全氟壬烷酸的1毫克/升。这些暴露值与其他分类群(黑头鲦鱼幼虫和大水蚤)和体外数据公布的危害基准进行了比较。与之前测试的分类群和体外试验相比,亚capitata对所测PFAS更为敏感,但其tpod平均比五大湖支流中检测到的PFAS最大浓度高3个数量级。这种高通量的藻类转录组学分析是一种有前途的新方法,用于生态相关的分层危害评估策略。
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引用次数: 0
Significant research needs for defensible hazard assessment of UV Filters in aquatic ecosystems Part 1: Effects data. 水生生态系统中紫外线过滤器可防御危害评估的重要研究需求。第1部分:影响数据。
IF 3.6 4区 环境科学与生态学 Q2 ENVIRONMENTAL SCIENCES Pub Date : 2025-01-17 DOI: 10.1093/etojnl/vgaf018
Sandy Raimondo, Cheryl Hankins, W Matthew Henderson
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引用次数: 0
Evaluation of the effects of carbamazepine-loaded chitosan-coated PLGA-Zein nanoparticles on pilocarpine-induced seizure model in zebrafish larvae: Developmental toxicity and behavioral assays. 卡马西平负载壳聚糖包被PLGA-Zein纳米颗粒对匹罗卡平诱导的斑马鱼癫痫模型的影响:发育毒性和行为分析。
IF 3.6 4区 环境科学与生态学 Q2 ENVIRONMENTAL SCIENCES Pub Date : 2025-01-17 DOI: 10.1093/etojnl/vgae086
Gonca Alak, Serkan Yıldırım, Afife Busra Ugur Kaplan, Mine Köktürk, Dilek Nazlı, Berrah Gözegir, Gunes Ozhan, Meltem Cetin

Epilepsy, the most common neurological disorder worldwide, is characterized by sudden paroxysmal brain activity, which can be generalized or focal. Extensive research has explored various treatment strategies for this condition. Our study employed a pilocarpine (PL)-induced seizure model in zebrafish (Danio rerio) embryos and larvae to assess the effects of carbamazepine (CBZ)-loaded chitosan-coated PLGA-Zein nanoparticles (NPs) over 96 hours. We evaluated the developmental toxicity (mortality, malformation, and larval hatching), behavioral changes (sensorimotor reflexes), and histopathological and immunohistochemical alterations in brain tissue, focusing on 5-hydroxytryptamine receptor 4 (5HT4), and brain and muscle ARNT-Like 1 (BMAL1) expressions. Our findings revealed high mortality and malformation rates in groups treated with pure CBZ (PL+CBZ 50 and PL+CBZ 100). These groups also exhibited delayed hatching and impaired sensorimotor reflexes. In contrast, the CBZ-NP-treated groups (PL+CBZ NP 50 and PL+CBZ NP 100) showed hatching rates comparable to the control group, with significantly lower mortality and malformation rates compared to pure CBZ-treated groups. Moreover, intense cytoplasmic expression of 5HT4 and BMAL1 was observed in neuropils of the PL+CBZ 100 group. This study highlights the potential of CBZ-loaded NPs in reducing developmental toxicity and adverse neurological effects associated with pure CBZ treatment in seizure models.

癫痫是世界上最常见的神经系统疾病,其特征是突然发作性脑活动,可全身性或局灶性。广泛的研究已经探索了这种情况的各种治疗策略。本研究采用匹罗卡平(PL)诱导斑马鱼(Danio rerio)胚胎和幼虫的癫痫模型,评估卡马西平(CBZ)负载壳聚糖包被的plga -玉米蛋白纳米颗粒(NPs)在96小时内的作用。我们评估了发育毒性(死亡率、畸形和幼虫孵化)、行为改变(感觉运动反射)以及脑组织的组织病理学和免疫组织化学改变,重点是5-羟色胺受体4 (5HT4)和大脑和肌肉的ARNT-Like 1 (BMAL1)表达。我们的研究结果显示,纯CBZ (PL+CBZ 50和PL+CBZ 100)治疗组的死亡率和畸形率很高。这些群体还表现出孵化延迟和感觉运动反射受损。相比之下,CBZ-NP处理组(PL+CBZ NP 50和PL+CBZ NP 100)的孵化率与对照组相当,死亡率和畸形率明显低于纯CBZ处理组。此外,在PL+ cbz100组的神经丸中,5HT4和BMAL1的细胞质表达强烈。这项研究强调了CBZ负载NPs在减少癫痫发作模型中与纯CBZ治疗相关的发育毒性和不良神经系统效应方面的潜力。
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引用次数: 0
Significant research needs for defensible hazard assessment of UV Filters in aquatic ecosystems Part 2: Analytical methods of organic UV filters. 水生生态系统中紫外线过滤器可防御危害评估的重要研究需求。第2部分:有机紫外线过滤器的分析方法。
IF 3.6 4区 环境科学与生态学 Q2 ENVIRONMENTAL SCIENCES Pub Date : 2025-01-17 DOI: 10.1093/etojnl/vgaf019
W Matthew Henderson, Cheryl Hankins, Sandy Raimondo
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引用次数: 0
Multiple physiological response analyses of Chlorella vulgaris exposed to silver nanoparticles, ciprofloxacin, and their combination. 银纳米粒子、环丙沙星及其组合对普通小球藻的多重生理反应分析。
IF 3.6 4区 环境科学与生态学 Q2 ENVIRONMENTAL SCIENCES Pub Date : 2025-01-16 DOI: 10.1093/etojnl/vgaf013
N Romero, S V Kergaravat, L Regaldo, S R Hernández, A B Seabra, F F Ferreira, I M Lourenço, G R Castro, A M Gagneten

The combination of silver nanoparticles (AgNPs) and ciprofloxacin (CIP) can be considered an alternative to combat multidrug-resistant microbial infections. However, knowledge about their combined toxicity is scarce after being released in an aquatic environment. The present study evaluated the individual toxicity of AgNPs and CIP and their combined toxicity on the unicellular green microalga Chlorella vulgaris, evaluating cellular responses and conducting metabolomic analysis. The median effective concentrations at 96 h (EC50-96h) for AgNPs, CIP, and the mixture were 132 µg L-1, 7000 µg L-1, and 452 µg L-1, respectively. CIP exhibited a synergistic effect with AgNPs. The toxic ranking for C. vulgaris was AgNPs > AgNPs + CIP > CIP. The growth rate was the most evident parameter of toxicity. Cell diameter significantly increased (p < 0.001) at 96 hours for the highest concentrations tested of AgNPs, CIP, and the mixture, with increases of 24%, 41%, and 19%, respectively, compared to the control. Photosynthetic pigment analyses revealed that C. vulgaris upregulated chlorophyll, carotenoids, and pheophytin. Cell exposure to CIP caused an SOS response involving increased protein and carbohydrate concentrations to tolerate antibiotic stress. Exposure to AgNPs and CIP increased catalase and glutathione S-transferase activity, but the mixture decreased the activity. AgNPs increased malondialdehyde content in exposed cells due to fatty acid peroxidation. These pollutants revealed their potential risks in interfering with survival and metabolism. Our findings highlight the possible hazards of co-pollutants at environmentally relevant quantities, providing insights into the individual and combined ecotoxicity of AgNPs and CIP.

银纳米颗粒(AgNPs)和环丙沙星(CIP)的组合可以被认为是对抗多药耐药微生物感染的一种替代方法。然而,关于它们在水生环境中释放后的综合毒性的知识很少。本研究评估了AgNPs和CIP对单细胞绿色微藻小球藻(Chlorella vulgaris)的单独毒性和联合毒性,评估了细胞反应并进行了代谢组学分析。AgNPs、CIP和混合物在96h (EC50-96h)的中位有效浓度分别为132µg L-1、7000µg L-1和452µg L-1。CIP与AgNPs表现出协同效应。毒力排序为AgNPs > AgNPs + CIP > CIP。生长速率是毒性最明显的参数。细胞直径显著增加(p
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引用次数: 0
Assessing chronic effects of chemical pollution on biodiversity using mean species abundance relationships. 利用平均物种丰度关系评价化学污染对生物多样性的慢性影响。
IF 3.6 4区 环境科学与生态学 Q2 ENVIRONMENTAL SCIENCES Pub Date : 2025-01-16 DOI: 10.1093/etojnl/vgaf015
Venja S A M Schoenke, Jiaqi Wang, Paul J Van den Brink, A Jan Hendriks

Since chemical pollution poses a persistent threat to freshwater ecosystems and biodiversity, innovative methodologies are required to address the ecological risks associated with such pollutants. This study predicts the long-term impacts of chemicals based on an equation that describes the time-dependency of the median lethal and effect concentration (L(E)C50) with the Critical Body Residue concept. This way, the methodology can predict Species Sensitivity Distributions (SSDs) for any given time point. The methodology was extended to predict the Mean Species Abundance Relationships (MSAR) as an indicator of biodiversity. To test and validate the methodology, data from a case study with six freshwater arthropods exposed short- and long-term to imidacloprid was used. The potentially affected fraction of species (PAF) and its opposite (1-PAF) was used to validate the MSAR framework itself. The accuracy of the predicted chronic median lethal concentration (LC50) values was species-dependent. However, except for one species, all predicted chronic LC50 values were within the 95% Confidence Intervals (CIs) of the fits based on only acute data. The mean differences between the predicted and calculated MSARs were between 2% and 6%. The predicted MSARs generally underestimated the impact of imidacloprid. However, all predicted MSARs were either similar or lower than the calculated 1-PAF, and their CIs covered the calculated MSARs. Thus, the study found that the presented methodology is useful for predicting the long-term effects of chemical pollutants.

由于化学污染对淡水生态系统和生物多样性构成持续威胁,因此需要创新的方法来处理与此类污染物有关的生态风险。本研究基于一个方程来预测化学品的长期影响,该方程描述了致命中值和效应浓度(L(E)C50)与临界身体残留概念的时间依赖性。这样,该方法可以预测任何给定时间点的物种敏感性分布(ssd)。将该方法扩展到预测平均物种丰度关系(MSAR)作为生物多样性的指标。为了测试和验证该方法,研究人员使用了六种淡水节肢动物短期和长期暴露于吡虫啉的案例研究数据。潜在受影响的物种(PAF)及其对立面(1-PAF)被用来验证澳门特别行政区框架本身。预测慢性中位致死浓度(LC50)值的准确性具有物种依赖性。然而,除了一个物种外,所有预测的慢性LC50值都在仅基于急性数据的拟合的95%置信区间(CIs)内。预测和计算的MSARs之间的平均差异在2%到6%之间。预测的MSARs通常低估了吡虫啉的影响。然而,所有预测的MSARs要么与计算的1-PAF相似,要么低于计算的1-PAF,而且它们的ci覆盖了计算的MSARs。因此,研究发现所提出的方法对于预测化学污染物的长期影响是有用的。
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引用次数: 0
Comparison of in vitro transcriptomic points of departure with fish acute and chronic toxicity values: A case study of rainbow trout cells exposed to pesticides. 体外转录组学起点与鱼类急性和慢性毒性值的比较:暴露于农药的虹鳟鱼细胞的案例研究。
IF 3.6 4区 环境科学与生态学 Q2 ENVIRONMENTAL SCIENCES Pub Date : 2025-01-16 DOI: 10.1093/etojnl/vgaf017
Sophie Emberley-Korkmaz, Krittika Mittal, Ke Xu, Jessica Head, Niladri Basu

There is growing interest in transcriptomic points of departure (tPOD) values from in vitro experiments as an alternative to animal test method. The study objective was to calculate tPODs in rainbow trout gill cells (RTgill-W1 following OECD 249) exposed to pesticides, and to evaluate how these values compare to fish acute and chronic toxicity data. Cells were exposed to one fungicide (chlorothalonil), ten herbicides (atrazine, glyphosate, imazethapyr, metolachlor, diquat, s-metolachlor, AMPA, dicamba, dimethenamid-P, metribuzin), eight insecticides (chlorpyrifos, diazinon, permethrin, carbaryl, clothianidin, imidacloprid, thiamethoxam, chlorantraniliprole), and OECD 249 positive control 3,4-dichloroaniline. Pesticide concentrations in wells were modeled with IV-MBM EQP v2.1. Sequencing libraries were prepared with UPXome, and tPODs calculated with ExpressAnalyst. The method identified 14,449 unique genes, with 1,115 genes having >5 counts in the 576 samples sequenced. For all chemicals, tPODs were derived and tPOD mode values ranged from 0.0004 to 125µM with an average of 36µM. There were significant correlations between tPOD mode values (x-value) and EC50s from RTgill-W1 cells (y = 0.92x+1.2, R2=0.9, p < 0.00001; n = 11), rainbow trout acute toxicity LC50s (y = 0.81x+0.8, R2=0.63, p < 0.0001; n = 20), fish chronic sub-lethal effect concentrations (y = 0.53x-0.2, R2=0.4, p = 0.009; n = 16) and fish chronic lethal effect concentrations (y = 0.64x-0.023, R2=0.59, p = 0.0013; n = 14). Bland-Altman plot analyses of these comparisons also showed good agreement. Pathway-level benchmark doses were calculated when statistical requirements were met, and only possible for four pesticides. These findings support the notion that tPODs from short-term in vitro studies may be comparable to effect concentration data from in vivo studies of fish exposed for chronic durations.

有越来越多的兴趣转录组的出发点(tPOD)值从体外实验作为替代动物试验方法。研究目的是计算暴露于农药的虹鳟鱼鳃细胞(RTgill-W1, OECD 249)的tpod,并评估这些值与鱼类急性和慢性毒性数据的比较。细胞暴露于1种杀菌剂(百菌清)、10种除草剂(阿特拉津、草甘膦、吡嗪、异丙甲草胺、AMPA、麦草畏、二甲氰胺- p、甲霉嗪)、8种杀虫剂(毒死蜱、二嗪农、氯菊酯、西威因、噻虫胺、吡虫啉、噻虫嗪、氯虫腈)和OECD 249阳性对照3,4-二氯苯胺。采用IV-MBM EQP v2.1对井中农药浓度进行建模。用UPXome制备测序文库,用ExpressAnalyst计算tpod。该方法鉴定出14,449个独特基因,在测序的576个样本中,有1,115个基因计数为bb50。对于所有化学物质,tPOD模式值范围为0.0004至125µM,平均值为36µM。tPOD模式值(x值)与RTgill-W1细胞的ec50呈显著相关(y = 0.92x+1.2, R2=0.9, p
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Environmental Toxicology and Chemistry
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