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FtsZ phosphorylation brings about growth arrest upon DNA damage in Deinococcus radiodurans FtsZ磷酸化导致耐辐射球菌DNA损伤后的生长停滞
IF 2.7 Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2022-10-19 DOI: 10.1096/fba.2022-00082
Reema Chaudhary, Shruti Mishra, Ganesh K. Maurya, Yogendra S. Rajpurohit, Hari S. Misra

The polymerization/depolymerization dynamics of FtsZ play a pivotal role in cell division in the majority of the bacteria. Deinococcus radiodurans, a radiation-resistant bacterium, shows an arrest of growth in response to DNA damage with no change in the level of FtsZ. This bacterium does not deploy LexA/RecA type of DNA damage response and cell cycle regulation, and its genome does not encode SulA homologues of Escherichia coli, which attenuate FtsZ functions in response to DNA damage in other bacteria. A radiation-responsive Ser/Thr quinoprotein kinase (RqkA), characterized for its role in radiation resistance in this bacterium, could phosphorylate several cognate proteins, including FtsZ (drFtsZ) at Serine 235 (S235) and Serine 335 (S335) residues. Here, we reported the detailed characterization of S235 and S335 phosphorylation effects in the regulation of drFtsZ functions and demonstrated that the phospho-mimetic replacements of these residues in drFtsZ had grossly affected its functions that could result in cell cycle arrest in response to DNA damage in D. radiodurans. Interestingly, the phospho-ablative replacements were found to be nearly similar to drFtsZ, whereas the phospho-mimetic mutant lost the wild-type protein's signature characteristics, including its dynamics under normal conditions. The kinetics of post-bleaching recovery for drFtsZ and phospho-mimetic mutant were nearly similar at 2 h post-irradiation recovery but were found to be different under normal conditions. These results highlighted the role of S/T phosphorylation in the regulation of drFtsZ functions and cell cycle arrest in response to DNA damage, which is demonstrated for the first time, in any bacteria.

FtsZ的聚合/解聚动力学在大多数细菌的细胞分裂中起着关键作用。耐辐射球菌是一种抗辐射细菌,其生长因DNA损伤而停止,FtsZ水平没有变化。这种细菌不部署LexA/RecA类型的DNA损伤反应和细胞周期调节,其基因组也不编码大肠杆菌的SulA同源物,这会削弱FtsZ对其他细菌DNA损伤的反应功能。辐射响应性Ser/Thr醌蛋白激酶(RqkA)因其在该细菌中的辐射抗性中的作用而被表征,它可以磷酸化几种同源蛋白,包括丝氨酸235(S235)和丝氨酸335(S335)残基处的FtsZ(drFtsZ)。在这里,我们报道了S235和S335磷酸化作用在drFtsZ功能调节中的详细表征,并证明drFtsZ中这些残基的磷酸模拟置换严重影响了其功能,可能导致耐辐射D.radiodurans细胞周期停滞以响应DNA损伤。有趣的是,发现磷酸消融替代物与drFtsZ几乎相似,而磷酸模拟突变体失去了野生型蛋白的特征性特征,包括其在正常条件下的动力学。drFtsZ和拟磷酸突变体的漂白后恢复动力学在辐照后恢复2小时时几乎相似,但在正常条件下发现不同。这些结果强调了S/T磷酸化在调节drFtsZ功能和细胞周期停滞以应对DNA损伤中的作用,这在任何细菌中都是首次证明的。
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引用次数: 3
Early developmental phenotypes in the cystic fibrosis sheep model 囊性纤维化羊模型的早期发育表型
IF 2.7 Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2022-10-17 DOI: 10.1096/fba.2022-00085
Arnaud J. Van Wettere, Shih-Hsing Leir, Calvin U. Cotton, Misha Regouski, Iuri Viotti Perisse, Jenny L. Kerschner, Alekh Paranjapye, Zhiqiang Fan, Ying Liu, Makayla Schacht, Kenneth L. White, Irina A. Polejaeva, Ann Harris

Highly effective modulator therapies for cystic fibrosis (CF) make it a treatable condition for many people. However, although CF respiratory illness occurs after birth, other organ systems particularly in the digestive tract are damaged before birth. We use an ovine model of CF to investigate the in utero origins of CF disease since the sheep closely mirrors critical aspects of human development. Wildtype (WT) and CFTR -/- sheep tissues were collected at 50, 65, 80, 100, and 120 days of gestation and term (147 days) and used for histological, electrophysiological, and molecular analysis. Histological abnormalities are evident in CFTR-/- -/-  animals by 80 days of gestation, equivalent to 21 weeks in humans. Acinar and ductal dilation, mucus obstruction, and fibrosis are observed in the pancreas; biliary fibrosis, cholestasis, and gallbladder hypoplasia in the liver; and intestinal meconium obstruction, as seen at birth in all large animal models of CF. Concurrently, cystic fibrosis transmembrane conductance regulator (CFTR)-dependent short circuit current is present in WT tracheal epithelium by 80 days gestation and is absent from CFTR -/- tissues. Transcriptomic profiles of tracheal tissues confirm the early expression of CFTR and suggest that its loss does not globally impair tracheal differentiation.

囊性纤维化(CF)的高效调节疗法使其成为许多人可治疗的疾病。然而,虽然CF呼吸道疾病发生在出生后,但其他器官系统,特别是消化道,在出生前就已经受损。我们使用绵羊CF模型来研究CF疾病的子宫起源,因为绵羊密切反映了人类发育的关键方面。野生型(WT)和CFTR -/-羊在妊娠50、65、80、100和120天和足月(147天)收集组织,用于组织学、电生理和分子分析。CFTR-/- -/-动物在妊娠80天(相当于人类的21周)时出现明显的组织学异常。胰腺可见腺泡和导管扩张、粘液阻塞和纤维化;肝脏胆道纤维化、胆汁淤积、胆囊发育不全;同时,囊性纤维化跨膜传导调节剂(CFTR)依赖的短路电流在妊娠80天的WT气管上皮中存在,而在CFTR -/-组织中不存在。气管组织的转录组谱证实了CFTR的早期表达,并表明CFTR的缺失不会全面损害气管分化。
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引用次数: 1
“Student-led workshop strengthens perceived discussion skills and community in an interdisciplinary graduate program” “学生主导的研讨会在跨学科研究生课程中加强了感知的讨论技巧和社区”
IF 2.7 Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2022-10-17 DOI: 10.1096/fba.2021-00165
Catharine Shipps, Kyra L. Thrush, Clorice R. Reinhardt, Sara A. Siwiecki, Jennifer L. Claydon, Dorottya B. Noble, Corey S. O'Hern

The Integrated Graduate Program in Physical and Engineering Biology (IGPPEB) at Yale University brings together Ph.D. students from the physical, engineering, and biological sciences. The main goals of this program are for students to become comfortable working in an interdisciplinary and collaborative research environment and adept at communicating with scientists and nonscientists. To fill a student-identified learning gap in engaging in inclusive discussions, IGPPEB students developed a communication workshop to improve skills in visual engagement, citing specific content, constructive conversation entrances, and encouragement of peers. Based on short- and long-term assessment of the workshop, 100% of students reported that it should be offered to future cohorts and 63% of students perceived it to be personally helpful. Additionally, 92% of participants reported using one or more of the core skills beyond the course, with skills in “Encouraging peers” and “Constructive conversation entrances” rated the highest in perceived improvement. Based on the highest average rating of 76 ± 24 (on a scale of 0–100), students agreed that the workshop made them feel more welcome in the IGPPEB community. With a rating of 68 ± 13, they also agreed that the workshop had a positive impact on their graduate school experience. Participants provided suggestions for future improvements, such as increasing student involvement in leading discussions of course material. This study demonstrates that a student-led workshop can improve perceived discussion skills and build community across an interdisciplinary program in the sciences.

耶鲁大学物理与工程生物学综合研究生课程(IGPPEB)汇集了来自物理、工程和生物科学领域的博士生。该计划的主要目标是让学生在跨学科和合作研究环境中变得舒适,并善于与科学家和非科学家沟通。为了填补学生在参与包容性讨论方面的学习差距,IGPPEB学生开发了一个交流研讨会,以提高视觉参与的技能,引用特定的内容,建设性的对话入口,并鼓励同龄人。根据对研讨会的短期和长期评估,100%的学生报告说它应该提供给未来的同龄人,63%的学生认为它对个人有帮助。此外,92%的参与者报告说,在课程之外使用了一项或多项核心技能,其中“鼓励同伴”和“建设性对话入门”的技能在感知改善方面排名最高。根据最高平均评分(76±24分,满分为0-100分),学生们一致认为,研讨会让他们觉得自己在IGPPEB社区中更受欢迎。在68±13的评分中,他们也同意工作坊对他们的研究生院经历有积极的影响。与会者对未来的改进提出了建议,例如增加学生对课程材料的主导讨论的参与。本研究表明,学生主导的研讨会可以提高感知的讨论技巧,并在跨学科的科学项目中建立社区。
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引用次数: 0
When women win, we all win—Call for a gendered global NCD agenda 当妇女赢了,我们都赢了——呼吁制定一个性别化的全球非传染性疾病议程
IF 2.7 Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2022-10-06 DOI: 10.1096/fba.2021-00140
Christine Ngaruiya

Gender is a social determinant of health, interacting with other factors such as income, education, and housing and affects health care access and health care outcomes. This paper reviews key literature and policies on health disparities and gender disparities within health. It examines noncommunicable disease (NCD) health outcomes through a gender lens and challenges existing prevailing measures of success for NCD outcomes that focus primarily on mortality. Chronic respiratory disease, one of the four leading contributors to NCD mortality, is highlighted as a case study to demonstrate the gender gap. Women have different risk factors and higher morbidity for chronic respiratory disease compared to men but morbidity is shadowed by a penultimate research focus on mortality, which results in less attention to the gap in women's NCD outcomes. This, in turn, affects how resources, programs, and interventions are implemented. It will likely slow progress in reducing overall NCD burden if we do not address risk factors in an equitable fashion. The article closes with recommendations to address these gender gaps in NCD outcomes. At the policy level, increasing representation and inclusion in global public health leadership, prioritizing NCDs among marginalized populations by global health societies and political organizations, aligning the gendered global NCD agenda with other well-established movements will each catalyze change for gender-based disparities in global NCDs specifically. Lastly, incorporating gender-based indicators and targets in major NCD-related goals and advancing gender-based NCD research will strengthen the evidence base for women's unique NCD risks and health outcomes.

性别是健康的一个社会决定因素,与收入、教育和住房等其他因素相互作用,并影响卫生保健的获得和结果。本文综述了健康差异和健康中的性别差异的主要文献和政策。它从性别角度审视非传染性疾病的健康结果,并对主要关注死亡率的非传染性疾病结果的现有主流成功衡量标准提出挑战。慢性呼吸道疾病是造成非传染性疾病死亡的四大主要原因之一,它作为一个案例研究加以强调,以说明性别差距。与男性相比,女性患慢性呼吸系统疾病的风险因素不同,发病率也更高,但发病率却被关注死亡率的倒数第二项研究所掩盖,这导致对女性非传染性疾病结果差距的关注较少。这反过来又影响资源、规划和干预措施的实施。如果我们不以公平的方式处理风险因素,可能会减缓减少总体非传染性疾病负担的进展。文章最后提出了解决非传染性疾病结果中的这些性别差距的建议。在政策层面,增加全球公共卫生领导层的代表性和包容性,全球卫生协会和政治组织优先考虑边缘化人群的非传染性疾病,使性别化的全球非传染性疾病议程与其他行之有效的运动保持一致,这些都将促进全球非传染性疾病中基于性别的差异的变化。最后,将基于性别的指标和目标纳入与非传染性疾病有关的主要目标,并推进基于性别的非传染性疾病研究,将加强关于妇女独特的非传染性疾病风险和健康结果的证据基础。
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引用次数: 0
Ralph A. Bradshaw: Scholar, leader, entrepreneur 拉尔夫·a·布拉德肖:学者、领袖、企业家
IF 2.7 Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2022-09-30 DOI: 10.1096/fba.2022-00088
Philip D. Stahl

Ralph Bradshaw, sage colleague, entrepreneur, gifted editor, and prescient scientist, recently stepped down as the Editor in Chief of FASEB BioAdvances. This presents the opportunity to pause and reflect on the career of an extraordinary individual, whose continuing commitment to science, science publishing, and the scholarly societies that represent and advocate for us all, illustrates the exceptional. Ralph's career reflects an unyielding dedication to those goals that we all strive to achieve—scholarship with high standards, leadership, service, and entrepreneurship.

Ralph grew up in the Boston area and attended Colby College, where he majored in chemistry; he completed his doctorate with Robert Hill in the Biochemistry Department at Duke, where his thesis work focused on protein chemistry. His postdoctoral work at Indiana University in the laboratory of Frank Gurd and the University of Washington in the laboratory of Hans Neurath allowed him to refine his repertoire of protein sequencing and analytic methodologies. P. Roy Vagelos (former CEO of Merck and former department head at Washington University) recruited Ralph to the Department of Biological Chemistry at Washington University as Roy began a highly successful renovation and rebuilding of the department after the long reign of Carl Cori. This is where I first met Ralph, as we were newly appointed assistant professors in biochemistry and physiology, respectively, and shared our interest in graduate education.

In 1973, Vagelos and colleagues at Washington University advanced a novel approach to graduate education in the biological and biomedical sciences, the Division of Biology and Biomedical Sciences (DBBS)—recently named the Roy and Diana Vagelos Division of Biology and Biomedical Sciences. The idea was based on the ongoing diversification of medical and biological research, where the traditional departmental boundaries that separated disparate “fields of research” were increasingly seen as hardened silos that suppressed innovation and reduced opportunities for graduate research. By creating programs built on common faculty interests rather than departmental affiliation, cross disciplinary opportunities for graduate research flourished—this approach in one form or another is now common among nearly all research institutions. Ralph Bradshaw played a key role in getting the DBBS off the ground—perhaps a precursor to his now well appreciated organizational skills. He was appointed the first chair of the newly formed graduate admissions committee, an enthusiastic recruiter of talented students to the programs and the principal investigator on one of the first NIH training grants under this new umbrella. Roy Vagelos commented, “Bradshaw was an enthusiastic and very effective recruiter of graduate students to Washington University. When the DBBS faculty decided that the University should have greater diversity among its graduate students, Ralph led a small group of facu

拉尔夫·布拉德肖,一位睿智的同事、企业家、天才编辑和有先见之明的科学家,最近辞去了FASEB BioAdvances的主编职务。这为我们提供了一个机会,让我们停下来反思一位杰出人士的职业生涯,他对科学、科学出版以及代表和倡导我们所有人的学术团体的持续承诺,说明了他的卓越。拉尔夫的职业生涯反映了对我们所有人努力实现的目标的不屈不挠的奉献-高标准的奖学金,领导能力,服务和创业精神。拉尔夫在波士顿地区长大,就读于科尔比学院,主修化学;他在杜克大学生物化学系和罗伯特·希尔一起完成了博士学位,他的论文主要研究蛋白质化学。他在印第安纳大学Frank Gurd实验室和华盛顿大学Hans Neurath实验室的博士后工作使他能够完善他的蛋白质测序和分析方法。P. Roy Vagelos(默克公司前首席执行官和华盛顿大学前系主任)将Ralph招募到华盛顿大学生物化学系,在Carl Cori的长期统治之后,Roy开始对该系进行非常成功的改造和重建。这是我第一次见到拉尔夫的地方,当时我们分别被任命为生物化学和生理学的助理教授,我们对研究生教育有着共同的兴趣。1973年,瓦格洛斯和他在华盛顿大学的同事们提出了一种新的生物和生物医学科学研究生教育方法,即生物和生物医学科学部(DBBS)——最近被命名为罗伊和戴安娜瓦格洛斯生物和生物医学科学部。这个想法是基于医学和生物研究的不断多样化,在这些研究中,分隔不同“研究领域”的传统部门界限越来越被视为压制创新和减少研究生研究机会的顽固筒仓。通过建立基于教师共同兴趣而不是部门隶属关系的项目,研究生研究的跨学科机会蓬勃发展——这种或那种形式的方法现在几乎在所有研究机构中都很常见。拉尔夫·布拉德肖(Ralph Bradshaw)在DBBS的起步过程中发挥了关键作用——也许这是他现在备受赞赏的组织能力的先驱。他被任命为新成立的研究生招生委员会的首任主席,热情地为这些项目招募有才华的学生,并在这个新保护伞下担任NIH首批培训补助金之一的首席研究员。罗伊·瓦格洛斯评论说:“布拉德肖是一位热情而高效的华盛顿大学研究生招聘人员。当DBBS的教职员工决定大学应该在研究生中有更大的多样性时,拉尔夫带领一小群教职员工访问了历史上的黑人学院,招募优秀的学生加入华盛顿大学的研究生项目。”拉尔夫过去和现在都是一个根深蒂固的数据保存者,以及数据是如何组织的,是一个Excel表格的主人。从澳大利亚休假回来后不久,拉尔夫在家里的书房里组装了一幅拼贴画,我们在那里接待了有抱负的申请者。这幅拼贴画包括了他旅行中整齐排列的几十件大事记。我刚从英国旅行回来,口袋里有一张火车票存根,我开玩笑地把它塞到了拉尔夫的一件拼贴画后面。你不知道吗,第二天早上第一件事就是我接到一个电话:“斯塔尔,你为什么要乱动我的(哔哔声)板子?”显然,这个人对秩序的关注贯穿了他的一生,他收集的各种书籍和纪念品,贯穿了他的研究和编辑工作。拉尔夫一直是一个“包容者”,努力提高历史上被排斥群体的代表性,将科学家聚集在一起,以加强合作,担任多个科学协会和组织的官员。以下是Amy Bradshaw(南卡罗来纳医科大学细胞生物学教授)的一句话:“在成长过程中,我们家有很多来自世界各地的访客,这让我看到并欣赏不同视角的奇迹——这是我父母强化和实践的理想。我有一个美好的童年记忆,那就是我们每年的感恩节大餐。在拉尔夫和佩妮家,我们经常举行大型聚会。由于这个部门的许多人都是国际人士,经常有客人从未听说过感恩节,或者对这个美国传统只有一个模糊的概念。我妈妈会做一只巨大的火鸡,每个人都会从世界各地带菜来完成这顿饭。 Ken Thomas (Trefoil Therapeutics的联合创始人和顾问,San Diego, CA, USA)写道:“除了Ralph的众多学术成就和贡献外,他还积极参与应用他在蛋白质生物化学方面的广泛科学专业知识和观点,担任工业顾问和企业科学顾问委员会成员,其中许多他担任主席。值得注意的是,他最近还与他以前的三名学生共同创立了几家公司,其中包括临床阶段的生物技术公司Trefoil Therapeutics,该公司是在他的实验室发现蛋白质生长因子FGF-1的早期工作中诞生的。拉尔夫一直密切参与三叶草的发展,担任首席科学官,目前担任科学顾问委员会主席。他以正直、知识渊博的洞察力和热情对待这些创业活动,使与他一起工作成为一种持续的有益和愉快的经历,不仅是作为共同创始人,也是作为独立的科学合作者,最初是博士后。”拉尔夫·布拉德肖,科学家、教师、编辑和企业家,是一群在20世纪60年代接受教育,在20世纪70年代进入学术界的个人、科学家和医生科学家中的一员,他们帮助改变和推进了美国生命科学,使其达到即使是最乐观的观察者也无法预料的水平。这群人为研究生教育和医学教育做出了贡献和支持;它们是扩展我们对细胞和生物体中分子过程的基本理解的关键驱动力;它们对将科学家及其社区与公众联系起来的传播质量和方式作出了广泛贡献;他们催化了基础科学向应用领域的转移,从实验室到病床。这些归因反映在这群资深科学家的职业生涯中。随着年龄的增长,这批人中的一些人在一个或多个领域表现出色。少数人在上述所有方面都取得了成就。这一类代表了拉尔夫·布拉德肖的贡献,我们对此深表感激和钦佩。
{"title":"Ralph A. Bradshaw: Scholar, leader, entrepreneur","authors":"Philip D. Stahl","doi":"10.1096/fba.2022-00088","DOIUrl":"10.1096/fba.2022-00088","url":null,"abstract":"<p>Ralph Bradshaw, sage colleague, entrepreneur, gifted editor, and prescient scientist, recently stepped down as the Editor in Chief of <i>FASEB BioAdvances</i>. This presents the opportunity to pause and reflect on the career of an extraordinary individual, whose continuing commitment to science, science publishing, and the scholarly societies that represent and advocate for us all, illustrates the exceptional. Ralph's career reflects an unyielding dedication to those goals that we all strive to achieve—scholarship with high standards, leadership, service, and entrepreneurship.</p><p>Ralph grew up in the Boston area and attended Colby College, where he majored in chemistry; he completed his doctorate with Robert Hill in the Biochemistry Department at Duke, where his thesis work focused on protein chemistry. His postdoctoral work at Indiana University in the laboratory of Frank Gurd and the University of Washington in the laboratory of Hans Neurath allowed him to refine his repertoire of protein sequencing and analytic methodologies. P. Roy Vagelos (former CEO of Merck and former department head at Washington University) recruited Ralph to the Department of Biological Chemistry at Washington University as Roy began a highly successful renovation and rebuilding of the department after the long reign of Carl Cori. This is where I first met Ralph, as we were newly appointed assistant professors in biochemistry and physiology, respectively, and shared our interest in graduate education.</p><p>In 1973, Vagelos and colleagues at Washington University advanced a novel approach to graduate education in the biological and biomedical sciences, the Division of Biology and Biomedical Sciences (DBBS)—recently named the Roy and Diana Vagelos Division of Biology and Biomedical Sciences. The idea was based on the ongoing diversification of medical and biological research, where the traditional departmental boundaries that separated disparate “fields of research” were increasingly seen as hardened silos that suppressed innovation and reduced opportunities for graduate research. By creating programs built on common faculty interests rather than departmental affiliation, cross disciplinary opportunities for graduate research flourished—this approach in one form or another is now common among nearly all research institutions. Ralph Bradshaw played a key role in getting the DBBS off the ground—perhaps a precursor to his now well appreciated organizational skills. He was appointed the first chair of the newly formed graduate admissions committee, an enthusiastic recruiter of talented students to the programs and the principal investigator on one of the first NIH training grants under this new umbrella. Roy Vagelos commented, “Bradshaw was an enthusiastic and very effective recruiter of graduate students to Washington University. When the DBBS faculty decided that the University should have greater diversity among its graduate students, Ralph led a small group of facu","PeriodicalId":12093,"journal":{"name":"FASEB bioAdvances","volume":null,"pages":null},"PeriodicalIF":2.7,"publicationDate":"2022-09-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9635006/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"40673514","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Bone marrow-derived extracellular vesicles modulate the abundance of infiltrating immune cells in the brain and exert an antiviral effect against the Japanese encephalitis virus 骨髓来源的细胞外囊泡调节大脑中浸润免疫细胞的丰度,并对日本脑炎病毒发挥抗病毒作用
IF 2.7 Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2022-09-26 DOI: 10.1096/fba.2022-00071
Naina Soni, Aarti Tripathi, Sriparna Mukherjee, Suchi Gupta, Sujata Mohanty, Anirban Basu, Arup Banerjee

Mesenchymal stem cells (MSCs) have regenerative capacity and have reported a beneficial effect on the Japanese encephalitis virus (JEV) in an encephalitis model. However, the MSCs do not cross the blood–brain barrier and have other disadvantages limiting their therapeutic utility scope. Recently, there has been a shift in concept from a cell-based to a cell-free approach using MSCs-derived extracellular vesicles (MSC-EVs). The MSC-EVs retain regenerative and immunomodulatory capacity as their parental cells. However, the role of MSC-EVs in limiting JEV pathology remains elusive. In this study, we have used Bone marrow (BM)-derived EV (BM-EVs) and assessed their effect on JEV replication and pathogenesis in primary neuronal stem cells and a murine model. The in vitro and in vivo studies suggested that BM-derived EVs delay JEV-induced symptoms and death in mice, improve the length of survival, accelerate neurogenesis in primary neuronal stem cells, reduce JEV-induced neuronal death, and attenuate viral replication. BM-EVs treatment upregulated interferon-stimulated genes. Flow cytometry analysis revealed a reduction in the frequency of macrophages. At the same time, CD4+ T cells and neutrophils were significantly augmented, accompanied by the alteration of cytokine expression with the administration of BM-EVs, reinforcing the immunomodulatory role of EVs during JEV-induced encephalitis. In conclusion, our study describes the beneficial role of BM-EVs in limiting JEV pathology by attenuating virus replication, enhancing antiviral response, and neurogenesis in primary neuronal stem cells. However, BM-EVs do not seem to protect BBB integrity and alter immune cell infiltration into the treated brain.

间充质干细胞(MSCs)具有再生能力,并在脑炎模型中报道了对日本脑炎病毒(JEV)的有益作用。然而,间充质干细胞不能穿过血脑屏障,并且有其他缺点限制了它们的治疗应用范围。最近,利用msc衍生的细胞外囊泡(msc - ev)的概念从基于细胞的方法转变为无细胞的方法。msc - ev与亲本细胞一样具有再生和免疫调节能力。然而,msc - ev在限制乙脑病毒病理中的作用仍然难以捉摸。在这项研究中,我们使用骨髓(BM)衍生的EV (BM-EV),并在原代神经干细胞和小鼠模型中评估了它们对乙脑病毒复制和发病的影响。体外和体内研究表明,脑脊髓炎衍生的EVs延缓了jev诱导的小鼠症状和死亡,延长了存活时间,加速了原代神经干细胞的神经发生,减少了jev诱导的神经元死亡,并减弱了病毒复制。bm - ev处理上调干扰素刺激基因。流式细胞术分析显示巨噬细胞频率降低。与此同时,脑内ev显著增加CD4+ T细胞和中性粒细胞,并伴有细胞因子表达的改变,增强了ev在乙脑诱导的脑炎中的免疫调节作用。总之,我们的研究描述了脑转移病毒通过减少病毒复制、增强抗病毒反应和原代神经干细胞的神经发生来限制乙脑病毒病理的有益作用。然而,bm - ev似乎不能保护血脑屏障的完整性,也不能改变免疫细胞对治疗脑的浸润。
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引用次数: 0
Dynamic regulation of the transcriptome and proteome of the equine embryo during maternal recognition of pregnancy 马胚胎在母体妊娠识别过程中转录组和蛋白质组的动态调控
IF 2.7 Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2022-09-17 DOI: 10.1096/fba.2022-00063
Alba Rudolf Vegas, Giorgia Podico, Igor F. Canisso, Heinrich Bollwein, Thomas Fröhlich, Stefan Bauersachs, Carmen Almiñana

During initial maternal recognition of pregnancy (MRP), the equine embryo displays a series of unique events characterized by rapid blastocyst expansion, secretion of a diverse array of molecules, and transuterine migration to interact with the uterine surface. Up to date, the intricate transcriptome and proteome changes of the embryo underlying these events have not been critically studied in horses. Thus, the objective of this study was to perform an integrative transcriptomic (including mRNA, miRNAs, and other small non-coding RNAs) and proteomic analysis of embryos collected from days 10 to 13 of gestation. The results revealed dynamic transcriptome profiles with a total of 1311 differentially expressed genes, including 18 microRNAs (miRNAs). Two main profiles for mRNAs and miRNAs were identified, one with higher expression in embryos ≤5 mm and the second with higher expression in embryos ≥7 mm. At the protein level, similar results were obtained, with 259 differentially abundant proteins between small and large embryos. Overall, the findings demonstrated fine-tuned transcriptomic and proteomic regulations in the developing embryo associated with embryo growth. The identification of specific regulation of mRNAs, proteins, and miRNAs on days 12 and 13 of gestation suggested these molecules as pivotal for embryo development and as involved in MRP, and in establishment of pregnancy in general. In addition, the results revealed new insights into prostaglandin synthesis by the equine embryo, miRNAs and genes potentially involved in modulation of the maternal immune response, regulation of endometrial receptivity and of late implantation in the mare.

在母体对妊娠的初始识别(MRP)过程中,马胚胎表现出一系列独特的事件,其特征是囊胚快速膨胀、多种分子的分泌以及经子宫迁移与子宫表面相互作用。迄今为止,这些事件背后复杂的胚胎转录组和蛋白质组变化尚未在马身上进行批判性研究。因此,本研究的目的是对妊娠第10至13天收集的胚胎进行综合转录组学(包括mRNA, mirna和其他小的非编码rna)和蛋白质组学分析。结果揭示了1311个差异表达基因的动态转录组图谱,其中包括18个microRNAs (miRNAs)。mrna和mirna主要有两种表达谱,一种在≤5 mm的胚胎中高表达,另一种在≥7 mm的胚胎中高表达。在蛋白质水平上,获得了类似的结果,在小胚胎和大胚胎之间存在259种差异丰富的蛋白质。总的来说,这些发现证明了胚胎发育中与胚胎生长相关的转录组学和蛋白质组学调控的微调。在妊娠第12天和第13天对mrna、蛋白质和mirna的特异性调控的鉴定表明,这些分子对胚胎发育、MRP和妊娠的建立起着关键作用。此外,研究结果还揭示了马胚胎中前列腺素的合成、mirna和可能参与母体免疫反应调节、子宫内膜容受性调节和母马晚期着床的基因的新见解。
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引用次数: 0
Fusion of the β2-adrenergic receptor with either Gαs or βarrestin-2 produces constitutive signaling by each pathway and induces gain-of-function in BEAS-2B cells 在BEAS-2B细胞中,β2-肾上腺素能受体与g - αs或β阻滞素-2的融合可通过每种途径产生组成性信号传导并诱导功能获得
IF 2.7 Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2022-09-16 DOI: 10.1096/fba.2022-00038
Emilio Y. Lucero-Garcia Rojas, Arfaxad Reyes-Alcaraz, Kehe Ruan, Bradley K. McConnell, Richard A. Bond

The β2AR is a prototypical G protein-coupled receptor (GPCR) known to orchestrate different cellular responses by the stimulation of specific signaling pathways. The best-established signaling pathways for the β2AR are the canonical Gs pathway and the alternative β arrestin 2 (βarr2) pathway. Exploring each pathway separately remains a challenging task due to the dynamic nature of the receptor. Here, we fused the β2AR with its cognate transducers, Gαs and βarr2, using short linkers as a novel approach for restricting the conformation of the receptor and preferentially activating one of its two signaling pathways. We characterized the behavior of our fusion proteins β2AR-Gαs and β2AR-βarr2 in HEK293 cells by measuring their constitutive activity, transducer recruitment, and pharmacological modulation. Our fusion proteins show (a) steric hindrance from the reciprocal endogenous transducers, (b) constitutive activity of the β2AR for the signaling pathway activated by the tethered transducer, and (c) pharmacologic modulation by β2AR ligands. Based on these characteristics, we further explored the possibility of a gain-of-function mechanism in the human lung non-tumorigenic epithelial cell line, BEAS-2B cells. This immortalized human bronchial epithelial cell line has immunomodulatory properties through cytokine release mediated by β2AR stimulation. Our findings suggest that each signaling pathway of the β2AR is biased toward either the Th1 or Th2 inflammatory response suggesting a role in regulating the immune phenotype of respiratory diseases. Our data imply that our fusion proteins can be used as tools to isolate the function elicited by a single signaling pathway in physiologically relevant cell types.

β2AR是一种典型的G蛋白偶联受体(GPCR),已知通过刺激特定的信号通路来协调不同的细胞反应。目前已建立的β 2ar信号通路是典型的Gs信号通路和βarr2信号通路。由于受体的动态性,分别探索每个途径仍然是一项具有挑战性的任务。在这里,我们将β2AR与其同源换能器Gαs和βarr2融合,使用短连接体作为限制受体构象和优先激活其两条信号通路之一的新方法。我们通过测量融合蛋白β2AR- g - αs和β2AR-βarr2在HEK293细胞中的构成活性、换能器募集和药理调节来表征它们的行为。我们的融合蛋白表现出(a)来自相互内源性换能器的空间位阻,(b) β2AR对拴系换能器激活的信号通路的组成活性,以及(c) β2AR配体的药理调节。基于这些特征,我们进一步探索了在人肺非致瘤性上皮细胞系BEAS-2B细胞中功能获得机制的可能性。这种永生化的人支气管上皮细胞系通过β2AR刺激介导的细胞因子释放具有免疫调节特性。我们的研究结果表明,β2AR的每个信号通路都偏向于Th1或Th2炎症反应,这表明它在调节呼吸系统疾病的免疫表型中起作用。我们的数据表明,我们的融合蛋白可以用作分离生理相关细胞类型中单个信号通路所引发的功能的工具。
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引用次数: 0
Inhibition of insulin-like growth factor 2 mRNA-binding protein 1 sensitizes colorectal cancer cells to chemotherapeutics 抑制胰岛素样生长因子2 mrna结合蛋白1使结直肠癌细胞对化疗药物敏感
IF 2.7 Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2022-09-09 DOI: 10.1096/fba.2021-00069
Nicole Betson, Mohammed Hajahmed, Tsige Gebretsadek, Kenneth Ndebele, H. Anwar Ahmad, Paul B. Tchounwou, Vladimir S. Spiegelman, Felicite K. Noubissi

Although colorectal cancer (CRC) treatment has seen a remarkable improvement in the recent years, many patients will develop metastasis due to the resistance of cancer cells to chemotherapeutics. Targeting mechanisms driving the resistance of CRC cells to treatment would significantly reduce cases of metastasis and death. Induction of insulin-like growth factor 2 mRNA-binding protein 1 (IGF2BP1), a direct target of the Wnt/β-catenin signaling pathway, might promote resistance of CRC cells to treatment via activation of anti-apoptotic pathways and induction of the multidrug resistance (MDR1) membrane transporter that pumps drugs out of the cells. We hypothesized that inhibition of IGF2BP1 will sensitize CRC cells to chemotherapeutics. We used CRC cell lines with different status of activation of Wnt signaling to show that inhibition of IGF2BP1 potentiates the anti-growth and anti-proliferative effects of chemotherapeutics on CRC cells with activated Wnt/β-catenin signaling pathway. We observed that the inhibition of IGF2BP1 significantly increases apoptosis in the same cells. A remarkable reduction in the migratory capability of those cells was noted as well. We found that inhibition of IGF2BP1 is sufficient to decrease the resistance of chemotherapy-resistant cancer cells with activated Wnt/β-catenin signaling pathway. These findings portray IGF2BP1 as a good candidate for CRC therapy.

虽然近年来结直肠癌(CRC)的治疗有了显著的改善,但由于癌细胞对化疗药物的耐药性,许多患者会发生转移。驱动结直肠癌细胞耐药的靶向机制将显著减少转移和死亡病例。胰岛素样生长因子2 mrna结合蛋白1 (IGF2BP1)是Wnt/β-catenin信号通路的直接靶点,其诱导可能通过激活抗凋亡通路和诱导多药耐药(MDR1)膜转运蛋白将药物泵出细胞,从而促进结直肠癌细胞对治疗的抵抗。我们假设抑制IGF2BP1会使结直肠癌细胞对化疗药物敏感。我们使用不同Wnt信号激活状态的CRC细胞系,表明抑制IGF2BP1增强了化疗药物对激活Wnt/β-catenin信号通路的CRC细胞的抗生长和抗增殖作用。我们观察到IGF2BP1的抑制显著增加了相同细胞的凋亡。还注意到这些细胞的迁移能力显著降低。我们发现抑制IGF2BP1足以降低Wnt/β-catenin信号通路激活的化疗耐药癌细胞的耐药性。这些发现表明IGF2BP1是CRC治疗的良好候选者。
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引用次数: 1
Transgenic overexpression of α7 integrin in smooth muscle attenuates allergen-induced airway inflammation in a murine model of asthma 在平滑肌中转基因过表达α7整合素可减轻哮喘小鼠模型中过敏原诱导的气道炎症
IF 2.7 Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2022-09-02 DOI: 10.1096/fba.2022-00050
Mariam A. Ba, Annemarie Aiyuk, Karla Hernández, Jon M. Evasovic, Ryan D. Wuebbles, Dean J. Burkin, Cherie A. Singer

Asthma is a chronic inflammatory disorder of the lower airways characterized by modulation of airway smooth muscle (ASM) function. Infiltration of smooth muscle by inflammatory mediators is partially regulated by transmembrane integrins and the major smooth muscle laminin receptor α7β1 integrin plays a critical role in the maintenance of ASM phenotype. The goal of the current study was to investigate the role of α7 integrin in asthma using smooth muscle-specific α7 integrin transgenic mice (TgSM-Itgα7) using both acute and chronic OVA sensitization and challenge protocols that mimic mild to severe asthmatic phenotypes. Transgenic over-expression of the α7 integrin in smooth muscle resulted in a significant decrease in airway resistance relative to controls, reduced the total number of inflammatory cells and substantially inhibited the production of crucial Th2 and Th17 cytokines in airways. This was accompanied by decreased secretion of various inflammatory chemokines such as eotaxin/CCL11, KC/CXCL3, MCP-1/CCL2, and MIP-1β/CCL4. Additionally, α7 integrin overexpression significantly decreased ERK1/2 phosphorylation in the lungs of TgSM-Itgα7 mice and affected proliferative, contractile, and inflammatory downstream effectors of ERK1/2 that drive smooth muscle phenotype in the lung. Taken together, these results support the hypothesis that enhanced expression of α7 integrin in vivo inhibits allergic inflammation and airway resistance. Moreover, we identify ERK1/2 as a potential target by which α7 integrin signals to regulate airway inflammation. We conclude that identification of therapeutics targeting an increase in smooth muscle α7 integrin expression could serve as a potential novel treatment for asthma.

哮喘是一种以气道平滑肌(ASM)功能调节为特征的下气道慢性炎症性疾病。炎症介质对平滑肌的浸润受跨膜整合素的部分调控,主要的平滑肌层粘连蛋白受体α7β1整合素在ASM表型的维持中起关键作用。本研究的目的是利用平滑肌特异性α7整合素转基因小鼠(TgSM-Itgα7),采用急性和慢性OVA致敏和激发方案,模拟轻度至重度哮喘表型,研究α7整合素在哮喘中的作用。在平滑肌中转基因过表达α7整合素导致气道阻力相对于对照组显著降低,炎症细胞总数减少,气道中关键Th2和Th17细胞因子的产生显著抑制。这伴随着各种炎症趋化因子的分泌减少,如eotaxin/CCL11、KC/CXCL3、MCP-1/CCL2和MIP-1β/CCL4。此外,α7整合素过表达显著降低了TgSM-Itgα7小鼠肺中ERK1/2的磷酸化,并影响了ERK1/2驱动肺平滑肌表型的增殖、收缩和炎症下游效应。综上所述,这些结果支持α7整合素在体内表达增强可抑制变应性炎症和气道抵抗的假设。此外,我们发现ERK1/2是α7整合素信号调节气道炎症的潜在靶点。我们的结论是,靶向平滑肌α7整合素表达增加的治疗方法可能成为哮喘的潜在新治疗方法。
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引用次数: 0
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