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Mouse developmental defects, but not paraganglioma tumorigenesis, upon conditional Complex II loss in early Sox10+ cells 早期 Sox10+ 细胞中条件性复合体 II 缺失会导致小鼠发育缺陷,但不会导致副神经节瘤肿瘤发生
IF 2.5 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-07-24 DOI: 10.1096/fba.2024-00056
Elizabeth P. Lewis, Fatimah Al Khazal, Brandon Wilbanks, Naomi M. Gades, Patricia Ortega-Sáenz, José López-Barneo, Igor Adameyko, L. James Maher III

In humans, loss of heterozygosity for defective alleles of any of the four subunits of mitochondrial tricarboxylic acid cycle enzyme succinate dehydrogenase (SDH, also Complex II of the electron transport chain) can lead to paraganglioma tumors in neuroendocrine cells. With the goal of developing mouse models of this rare disorder, we have developed various SDH conditional loss strategies. Based on recent lineage tracing studies, we hypothesized that conditional SDHC loss in early embryogenesis during migration of primordial neural crest cells that form the susceptible chromaffin cells of the adrenal medulla might induce paraganglioma. We triggered low levels of detectable SDHC loss in Sox10+ cells at E11.5 of mouse development. We report that, rather than developing adrenal medulla paraganglioma (pheochromocytoma), offspring survived with evidence of neural crest cell dysfunction. Phenotypes included mild lower extremity gait anomalies suggestive of neural tube closure defects and patches of unpigmented fur consistent with neural crest-derived melanocyte dysfunction. These defects were not observed in mice lacking Sdhc knockout. Our results add to existing data suggesting that, unlike humans, even early embryonic (Sox10-driven) SDHx loss is inadequate to trigger paraganglioma in mice of the genetic backgrounds that have been investigated. Instead, low levels of tricarboxylic acid cycle-deficient neural crest cells cause mild developmental defects in hind limb and melanocyte function. This new model may be of interest for studies of metabolism during early neural crest cell development.

在人类中,线粒体三羧酸循环酶琥珀酸脱氢酶(SDH,也是电子传递链的复合体 II)四个亚基中任何一个亚基的缺陷等位基因的杂合性缺失都会导致神经内分泌细胞中的副神经节瘤肿瘤。为了开发这种罕见疾病的小鼠模型,我们开发了多种 SDH 条件性缺失策略。根据最近的品系追踪研究,我们推测在胚胎早期形成肾上腺髓质嗜铬细胞的原始神经嵴细胞迁移过程中,条件性 SDHC 缺失可能会诱发副神经管瘤。我们在小鼠发育的 E11.5 阶段,在 Sox10+ 细胞中检测到了低水平的 SDHC 缺失。我们发现,小鼠的后代并没有发展成肾上腺髓质副神经节瘤(嗜铬细胞瘤),而是在神经嵴细胞功能障碍的证据下存活了下来。表型包括轻度下肢步态异常,提示神经管闭合缺陷,以及与神经嵴衍生黑色素细胞功能障碍一致的无色素皮毛斑块。在缺乏 Sdhc 基因敲除的小鼠中没有观察到这些缺陷。我们的研究结果补充了现有的数据,这些数据表明,与人类不同,即使是早期胚胎期(Sox10 驱动的)SDHx 缺失也不足以诱发已研究过的遗传背景小鼠的副神经节瘤。相反,低水平的三羧酸循环缺陷神经嵴细胞会导致后肢和黑色素细胞功能的轻度发育缺陷。这种新模型可能有助于研究神经嵴细胞早期发育过程中的新陈代谢。
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引用次数: 0
Reduction of pathological retinal neovascularization, vessel obliteration, and artery tortuosity by PEDF protein in an oxygen-induced ischemic retinopathy rat model 在氧气诱导的缺血性视网膜病变大鼠模型中,PEDF 蛋白可减少病理性视网膜新生血管、血管阻塞和动脉迂曲
IF 2.5 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-07-19 DOI: 10.1096/fba.2024-00059
Shiying Zhao, Alexander V. Tschulakow, Subha S. Karthikeyan, Kun Wang, Stefan Kochanek, Ulrich Schraermeyer, Sylvie Julien-Schraermeyer

Retinopathy of prematurity (ROP) is a severe retinal disease in premature infants characterized by pathological neovascularization, obliteration of retinal vessels and increased vessel tortuosity. Currently, there are no completely satisfactory treatments for ROP. Pigment epithelium-derived factor (PEDF), a potent inhibitor of angiogenesis, appears late in gestation and its deficiency may be linked to development of ROP. This study investigates the preclinical efficacy of PEDF protein alone or in combination with VEGF antagonists for treating ROP. The safety of PEDF protein in the rat eye was assessed using functional in vivo measurements and histology. The efficacy of intravitreal injections (IVI) of various treatments was evaluated in a rat oxygen-induced retinopathy (OIR) model using in vivo imaging and flatmount analyses. No functional or histological side-effects were found in rat eyes after intravitreal PEDF protein injection. PEDF protein alone or combined with anti-VEGF drugs significantly reduced pathological neovascularization and vessel obliteration, comparable to the effects of anti-VEGF drugs alone. Regarding arterial tortuosity, treatment with a combination of PEDF, and VEGF antagonist was more effective than treatment with anti-VEGF alone. IVI of PEDF protein is safe. PEDF protein alone or combined with VEGF antagonists shows similar efficacy in reducing pathological neovascularization and vessel obliteration as anti-VEGF agents. Furthermore, only treatments involving PEDF protein, alone or with VEGF antagonists, significantly improved the quality of retinal vasculature. Thus, PEDF protein alone or combined with anti-VEGF agents presents a promising alternative to current anti-VEGF treatments for ROP.

早产儿视网膜病变(ROP)是早产儿的一种严重视网膜疾病,以病理性新生血管形成、视网膜血管阻塞和血管迂曲增加为特征。目前,还没有完全令人满意的治疗早产儿视网膜病变的方法。色素上皮衍生因子(PEDF)是一种有效的血管生成抑制剂,在妊娠晚期出现,其缺乏可能与早产儿视网膜病变的发生有关。本研究调查了 PEDF 蛋白单独或与血管内皮生长因子拮抗剂联合治疗 ROP 的临床前疗效。使用体内功能测量和组织学方法评估了 PEDF 蛋白在大鼠眼中的安全性。在大鼠氧诱导视网膜病变(OIR)模型中,利用体内成像和平片分析评估了各种治疗方法的玻璃体内注射(IVI)疗效。在大鼠眼中静脉注射 PEDF 蛋白后,未发现任何功能性或组织学副作用。PEDF 蛋白单独使用或与抗血管内皮生长因子药物联合使用可显著减少病理性新生血管和血管阻塞,其效果与单独使用抗血管内皮生长因子药物相当。在动脉迂曲方面,联合使用 PEDF 和血管内皮生长因子拮抗剂比单独使用抗血管内皮生长因子更有效。PEDF 蛋白的静脉注射是安全的。PEDF 蛋白单独使用或与血管内皮生长因子拮抗剂联合使用,在减少病理性新生血管和血管阻塞方面的疗效与抗血管内皮生长因子药物相似。此外,只有 PEDF 蛋白单独或与血管内皮生长因子拮抗剂联合使用才能显著改善视网膜血管的质量。因此,PEDF 蛋白单独使用或与抗血管内皮生长因子药物联合使用,是目前抗血管内皮生长因子治疗视网膜病变的一种有前途的替代疗法。
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引用次数: 0
Oxidative stress mediates nucleocytoplasmic shuttling of KPNA2 via AKT1-CDK1 axis-regulated S62 phosphorylation 氧化应激通过AKT1-CDK1轴调控的S62磷酸化介导KPNA2的核细胞质穿梭运动
IF 2.5 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-07-05 DOI: 10.1096/fba.2024-00078
Jie-Xin Huang, Chun-I Wang, Chia-Yu Kuo, Ting-Wei Chang, Yu-Chin Liu, Ting-Feng Hsiao, Chih-Liang Wang, Chia-Jung Yu

Karyopherin α 2 (KPNA2, importin α1), a transport factor shuttling between the nuclear and cytoplasmic compartments, is involved in the nuclear import of proteins and participates in cellular processes such as cell cycle regulation, apoptosis, and transcriptional regulation. However, it is still unclear which signaling regulates the nucleocytoplasmic distribution of KPNA2 in response to cellular stress. In this study, we report that oxidative stress increases nuclear retention of KPNA2 through alpha serine/threonine-protein kinase (AKT1)-mediated reduction of serine 62 (S62) phosphorylation. We first found that AKT1 activation was required for H2O2-induced nuclear accumulation of KPNA2. Immunoprecipitation and quantitative proteomic analysis revealed that the phosphorylation of KPNA2 at S62 was decreased under H2O2-induced oxidative stress. We showed that cyclin-dependent kinase 1 (CDK1), a kinase responsible for KPNA2 S62 phosphorylation, contributes to the localization of KPNA2 in the cytoplasm. AKT1 knockdown increased KPNA2 S62 phosphorylation and inhibited CDK1 activation. Furthermore, H2O2-induced AKT1 activation promoted nuclear KPNA2 interaction with nucleophosmin 1 (NPM1), resulting in attenuation of NPM1-mediated cyclin D1 gene transcription. Thus, we infer that the AKT1-CDK1 axis regulates the nucleocytoplasmic shuttling and function of KPNA2 through spatiotemporal regulation of KPNA2 S62 phosphorylation under oxidative stress conditions.

Karyopherin α 2(KPNA2,导入素α1)是一种在细胞核和细胞质间穿梭的转运因子,它参与蛋白质的核导入,并参与细胞周期调控、细胞凋亡和转录调控等细胞过程。然而,目前还不清楚是哪种信号调节 KPNA2 在细胞应激反应中的核胞质分布。在本研究中,我们报告了氧化应激通过α丝氨酸/苏氨酸蛋白激酶(AKT1)介导的丝氨酸62(S62)磷酸化减少增加了KPNA2的核潴留。我们首先发现,H2O2 诱导的 KPNA2 核聚集需要 AKT1 激活。免疫沉淀和定量蛋白质组分析表明,在 H2O2 诱导的氧化应激下,KPNA2 在 S62 处的磷酸化减少。我们发现,细胞周期蛋白依赖性激酶1(CDK1)是一种负责KPNA2 S62磷酸化的激酶,它有助于KPNA2在细胞质中的定位。AKT1 基因敲除增加了 KPNA2 S62 磷酸化并抑制了 CDK1 的活化。此外,H2O2 诱导的 AKT1 激活促进了核 KPNA2 与 nucleophosmin 1(NPM1)的相互作用,导致 NPM1 介导的细胞周期蛋白 D1 基因转录减弱。因此,我们推断在氧化应激条件下,AKT1-CDK1 轴通过对 KPNA2 S62 磷酸化的时空调控来调节 KPNA2 在核细胞质中的穿梭和功能。
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引用次数: 0
Social defeat stress impairs systemic iron metabolism by activating the hepcidin–ferroportin axis 社会失败压力通过激活血红素-铁蛋白轴损害全身铁代谢
IF 2.5 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-07-02 DOI: 10.1096/fba.2024-00071
Emiko Kasahara, Ayumi Nakamura, Kenki Morimoto, Shiho Ito, Mika Hori, Atsuo Sekiyama

Chronic psychological stress has been reported to decrease circulating iron concentrations and impair hematopoiesis. However, the underlying mechanisms remain unclear. This study aimed to investigate the effects of psychological stress on biological iron metabolism by using the social defeat stress (SDS) model, a widely used model of depression. Compared with control mice, mice subjected to SDS (SDS mice) had lower social interaction (SI) behavior. The SDS mice also showed impaired hematopoiesis, as evidenced by reduced circulating red blood cell counts, elevated reticulocyte counts, and decreased plasma iron levels. In the SDS mice, the iron contents in the bone marrow decreased, whereas those in the spleen increased, suggesting dysregulation in systemic iron metabolism. The concentrations of plasma hepcidin, an important regulator of systemic iron homeostasis, increased in the SDS mice. Meanwhile, the concentrations of ferroportin, an iron transport protein negatively regulated by hepcidin, were lower in the spleen and duodenum of the SDS mice than in those of the control mice. Treatment with dalteparin, a hepcidin inhibitor, prevented the decrease in plasma iron levels in the SDS mice. The gene expression and enzyme activity of furin, which converts the precursor hepcidin to active hepcidin, were high and positively correlated with plasma hepcidin concentration. Thus, furin activation might be responsible for the increased plasma hepcidin concentration. This study is the first to show that psychological stress disrupts systemic iron homeostasis by activating the hepcidin–ferroportin axis. Consideration of psychological stressors might be beneficial in the treatment of diseases with iron-refractory anemia.

据报道,慢性心理压力会降低循环中铁的浓度并损害造血功能。然而,其潜在机制仍不清楚。本研究旨在利用广泛应用的抑郁症模型--社会挫败应激(SDS)模型,研究心理应激对生物铁代谢的影响。与对照组小鼠相比,SDS 小鼠的社会互动(SI)行为较低。SDS 小鼠还表现出造血功能受损,表现为循环红细胞计数减少、网状细胞计数升高和血浆铁水平降低。在 SDS 小鼠中,骨髓中的铁含量降低,而脾脏中的铁含量升高,这表明全身铁代谢失调。SDS 小鼠血浆中的血红素浓度升高,而血红素是全身铁平衡的重要调节因子。同时,SDS 小鼠脾脏和十二指肠中铁转运蛋白的浓度低于对照组小鼠,而铁转运蛋白是一种受肝磷脂负调控的铁转运蛋白。用肝磷脂抑制剂达肝素治疗可防止 SDS 小鼠血浆铁含量的下降。呋喃蛋白能将前体血磷素转化为活性血磷素,其基因表达和酶活性较高,并与血浆血磷素浓度呈正相关。因此,呋喃活化可能是血浆降血脂素浓度升高的原因。这项研究首次表明,心理压力会通过激活降血钙素-铁皮质素轴来破坏全身铁平衡。考虑心理应激因素可能有利于治疗难治性铁性贫血疾病。
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引用次数: 0
Tristetraprolin mediates immune evasion of mycobacterial infection in macrophages Tristetraprolin介导巨噬细胞对分枝杆菌感染的免疫逃避。
IF 2.5 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-06-29 DOI: 10.1096/fba.2024-00022
Jiawei Wei, Huan Ning, Octavio Ramos-Espinosa, Christopher S. Eickhoff, Rong Hou, Qinghong Wang, Mingui Fu, Ethan Y. Liu, Daping Fan, Daniel F. Hoft, Jianguo Liu

Immune evasion of Mycobacterium tuberculosis (Mtb) facilitates intracellular bacterial growth. The mechanisms of immune evasion, however, are still not fully understood. In this study, we reveal that tristetraprolin (TTP), one of the best characterized RNA-binding proteins controlling the stability of targeted mRNAs, mediates innate immune evasion of mycobacteria. We found that TTP knockout mice displayed reduced bacterial burden in the early stage after Mtb aerosol challenge. Macrophages deficient in TTP also showed an inhibition in intracellular mycobacterial growth. Live mycobacteria induced TTP protein expression in macrophages, which was blocked by the mTOR inhibitor rapamycin. Rapamycin and AZD8055 specifically blocked 4EBP1 phosphorylation in infected macrophages and suppressed intracellular BCG growth. Rapamycin promoted TTP protein degradation through the ubiquitination pathway, whereas the proteasome inhibitor MG-132 blocked rapamycin function and thus stabilized TTP protein. TTP induction suppressed the expression of iNOS/TNF-α/IL-12/IL-23, and weakened protective immune responses in macrophages, whereas rapamycin enhanced the bactericidal effects through TTP inhibition. Moreover, blocking TTP binding increased the expression of TNF-α and iNOS and suppressed intracellular mycobacterial growth. Overall, our study reveals a novel role for RNA-binding protein TTP in Mtb immune evasion mechanisms and provides a potential target for host-directed therapy against tuberculosis (TB).

结核分枝杆菌(Mtb)的免疫逃避有利于细菌在细胞内生长。然而,人们对免疫逃避的机制仍不完全了解。在这项研究中,我们揭示了控制靶标 mRNA 稳定性的 RNA 结合蛋白之一--Tristetraprolin(TTP)介导了分枝杆菌的先天免疫逃避。我们发现,在Mtb气溶胶挑战后的早期阶段,TTP基因敲除小鼠的细菌负担会减少。缺乏 TTP 的巨噬细胞也显示出细胞内分枝杆菌生长的抑制作用。活分枝杆菌可诱导巨噬细胞中 TTP 蛋白的表达,而 mTOR 抑制剂雷帕霉素可阻断 TTP 蛋白的表达。雷帕霉素和 AZD8055 能特异性阻断受感染巨噬细胞中的 4EBP1 磷酸化,抑制细胞内卡介苗的生长。雷帕霉素通过泛素化途径促进TTP蛋白降解,而蛋白酶体抑制剂MG-132阻断了雷帕霉素的功能,从而稳定了TTP蛋白。TTP 诱导抑制了 iNOS/TNF-α/IL-12/IL-23 的表达,削弱了巨噬细胞的保护性免疫反应,而雷帕霉素通过抑制 TTP 增强了杀菌作用。此外,阻断 TTP 结合可增加 TNF-α 和 iNOS 的表达,抑制细胞内分枝杆菌的生长。总之,我们的研究揭示了 RNA 结合蛋白 TTP 在 Mtb 免疫逃避机制中的新作用,并为宿主定向治疗结核病(TB)提供了一个潜在靶点。
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引用次数: 0
Bactericidal human monoclonal antibody 1B1 shows specificity for meningococcal factor H binding protein variant 2 and displaces human factor H 杀菌人类单克隆抗体 1B1 对脑膜炎球菌因子 H 结合蛋白变体 2 具有特异性,并能取代人类因子 H。
IF 2.5 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-06-27 DOI: 10.1096/fba.2023-00077
Daniele Veggi, Chelsy C. Chesterman, Laura Santini, Ying Huang, Nicola Pacchiani, Jeannette Sierra, Lynn Chen, Jason Laliberte, Federica Bianchi, Roberta Cozzi, Elisabetta Frigimelica, Domenico Maione, Oretta Finco, Matthew J. Bottomley

Thousands of disease cases and hundreds of deaths occur globally each year due to invasive meningococcal disease. Neisseria meningitidis serogroup B (MenB) is the leading cause of such disease in developed countries. Two vaccines, 4CMenB and MenB-fHbp, that protect against MenB are available and include one or two forms respectively of factor H binding protein (fHbp), a key protective antigen. Studies of circulating meningococci have identified over 1380 different fHbp amino acid sequences, which form three immunologically distinct clusters, termed variants 1, 2, and 3. Neither of the current vaccines contains a variant 2 antigen, which is less well characterized than fHbp variants 1 and 3. We characterized the interaction of fHbp variant 2 with humAb 1B1 using biochemical methods and live meningococcal assays. Further, we determined the crystal structure of the complex at 2.4 Å resolution, clearly revealing the epitope and providing the first detailed report of an antibody with distinct specificity for fHbp variant 2. Extensive mutagenesis and binding studies elucidated key hotspots in the interface. This combination of structural and functional studies provides a molecular explanation for the bactericidal potency and specificity of humAb 1B1 for fHbp variant 2. Our studies, focused on fHbp variant 2, expand the understanding of this previously under characterized group of the vast family of variants of fHbp, a virulence factor present on all meningococci. Moreover, the definition of a protective conformational epitope on fHbp variant 2 may support the design and development of novel variant 2-containing MenB vaccines affording greater breadth of protection.

全球每年因侵袭性脑膜炎球菌疾病导致数千病例和数百人死亡。在发达国家,脑膜炎奈瑟菌 B 血清群(MenB)是导致此类疾病的主要原因。目前有两种可预防 MenB 的疫苗,即 4CMenB 和 MenB-fHbp,其中分别含有一种或两种形式的 H 结合蛋白(fHbp),这是一种关键的保护性抗原。对循环脑膜炎球菌的研究发现了 1380 多种不同的 fHbp 氨基酸序列,它们形成了三个免疫学上不同的群组,分别称为变体 1、2 和 3。目前的疫苗都不含变体 2 抗原,其特征不如 fHbp 变体 1 和 3。我们利用生化方法和活脑膜炎球菌试验确定了 fHbp 变体 2 与 humAb 1B1 相互作用的特征。此外,我们还测定了该复合物 2.4 Å 分辨率的晶体结构,清楚地揭示了其表位,并首次详细报告了 fHbp 变体 2 具有独特特异性的抗体。广泛的诱变和结合研究阐明了界面中的关键热点。结构和功能研究的结合为 humAb 1B1 对 fHbp 变体 2 的杀菌效力和特异性提供了分子解释。我们的研究以 fHbp 变体 2 为重点,扩大了人们对 fHbp 变异体大家族中这一以前特征不清的变体群的了解,fHbp 变异体是存在于所有脑膜炎球菌中的致病因子。此外,fHbp 变体 2 上保护性构象表位的定义可能有助于设计和开发新型含变体 2 的 MenB 疫苗,从而提供更广泛的保护。
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引用次数: 0
Consequences of gene editing of PRLR on thermotolerance, growth, and male reproduction in cattle PRLR基因编辑对牛耐热性、生长和雄性繁殖的影响
IF 2.5 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-06-18 DOI: 10.1096/fba.2024-00029
Camila J. Cuellar, Thiago F. Amaral, Paula Rodriguez-Villamil, F. Ongaratto, D. Onan Martinez, Rémi Labrecque, João D. de Agostini Losano, Eliab Estrada-Cortés, Jonathan R. Bostrom, Kyra Martins, D. Owen Rae, Jeremy Block, Quinn A. Hoorn, Bradford W. Daigneault, Jonathan Merriam, Michael Lohuis, Serdal Dikmen, João H. J. Bittar, Tatiane S. Maia, Daniel F. Carlson, Sabreena Larson, Tad S. Sonstegard, Peter J. Hansen

Global warming is a major challenge to the sustainable and humane production of food because of the increased risk of livestock to heat stress. Here, the example of the prolactin receptor (PRLR) gene is used to demonstrate how gene editing can increase the resistance of cattle to heat stress by the introduction of mutations conferring thermotolerance. Several cattle populations in South and Central America possess natural mutations in PRLR that result in affected animals having short hair and being thermotolerant. CRISPR/Cas9 technology was used to introduce variants of PRLR in two thermosensitive breeds of cattle – Angus and Jersey. Gene-edited animals exhibited superior ability to regulate vaginal temperature (heifers) and rectal temperature (bulls) compared to animals that were not gene-edited. Moreover, gene-edited animals exhibited superior growth characteristics and had larger scrotal circumference. There was no evidence for deleterious effects of the mutation on carcass characteristics or male reproductive function. These results indicate the potential for reducing heat stress in relevant environments to enhance cattle productivity.

全球变暖是对可持续和人道粮食生产的一大挑战,因为牲畜遭受热应激的风险增加了。本文以催乳素受体(PRLR)基因为例,说明基因编辑如何通过引入具有耐热性的突变来提高牛对热应激的抵抗力。南美洲和中美洲的一些牛群中存在 PRLR 基因的自然突变,导致受影响的动物具有短毛和耐热性。研究人员利用 CRISPR/Cas9 技术,在安格斯牛和泽西牛这两个对温度敏感的牛种中引入了 PRLR 的变体。与未进行基因编辑的动物相比,经过基因编辑的动物在调节阴道温度(小母牛)和直肠温度(公牛)方面表现出更强的能力。此外,基因编辑过的动物表现出更优越的生长特性,阴囊周长更大。没有证据表明基因突变对胴体特征或雄性繁殖功能产生有害影响。这些结果表明,在相关环境中减少热应激有可能提高牛的生产力。
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引用次数: 0
Accelerating the continuous community sharing of digital neuromorphology data 加速数字神经形态学数据的持续社区共享。
IF 2.5 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-06-17 DOI: 10.1096/fba.2024-00048
Carolina Tecuatl, Bengt Ljungquist, Giorgio A. Ascoli

The tree-like morphology of neurons and glia is a key cellular determinant of circuit connectivity and metabolic function in the nervous system of essentially all animals. To elucidate the contribution of specific cell types to both physiological and pathological brain states, it is important to access detailed neuroanatomy data for quantitative analysis and computational modeling. NeuroMorpho.Org is the largest online collection of freely available digital neural reconstructions and related metadata and is continuously updated with new uploads. Earlier in the project, we released multiple datasets together yearly, but this process caused an average delay of several months in making the data public. Moreover, in the past 5 years, >80% of invited authors agreed to share their data with the community via NeuroMorpho.Org, up from <20% in the first 5 years of the project. In the same period, the average number of reconstructions per publication increased 600%, creating the need for automatic processing to release more reconstructions in less time. The progressive automation of our pipeline enabled the transition to agile releases of individual datasets as soon as they are ready. The overall time from data identification to public sharing decreased by 63.7%; 78% of the datasets are now released in less than 3 months with an average workflow duration below 40 days. Furthermore, the mean processing time per reconstruction dropped from 3 h to 2 min. With these continuous improvements, NeuroMorpho.Org strives to forge a positive culture of open data. Most importantly, the new, original research enabled through reuse of datasets across the world has a multiplicative effect on science discovery, benefiting both authors and users.

神经元和胶质细胞的树状形态是决定所有动物神经系统回路连接和代谢功能的关键细胞因素。要阐明特定细胞类型对大脑生理和病理状态的贡献,就必须获取详细的神经解剖学数据,以便进行定量分析和计算建模。NeuroMorpho.Org是免费提供的数字神经重建和相关元数据的最大在线集合,并不断更新上传。在项目早期,我们每年都会同时发布多个数据集,但这一过程导致数据公开平均延迟了几个月。此外,在过去的 5 年中,超过 80% 的受邀作者同意通过 NeuroMorpho.Org 与社区分享他们的数据,而之前的数字是
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引用次数: 0
Bile acids differentially regulate longitudinal smooth muscle contractility in everted mouse ileum 胆汁酸对小鼠回肠纵向平滑肌收缩力的不同调节作用
IF 2.5 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-06-17 DOI: 10.1096/fba.2024-00044
Peace N. Dike, Krishnakant G. Soni, Diana S. Chang, Geoffrey A. Preidis

Bile acids regulate gastrointestinal motility by mechanisms that are poorly understood. Standard isolated tissue bath assays might not recapitulate in vivo physiology if contractile responses to certain bile acids require direct application to the intestinal mucosa. We sought to determine the feasibility of quantifying longitudinal smooth muscle contractile responses to bile acids from intact segments of everted mouse ileum. Ileum from adult female C57BL/6J mice was isolated, gently everted over a notched metal rod, and mounted in tissue baths. Individual bile acids and agonists of bile acid receptors were added to the baths, and longitudinal smooth muscle contractile responses were quantified by isometric force transduction. Ursodeoxycholic acid robustly increased contractile responses in a dose-dependent manner. Deoxycholic acid stimulated contractility at low doses but inhibited contractility at high doses. Chenodeoxycholic acid, glycocholic acid, and lithocholic acid did not alter contractility. The dose-dependent increase in contractility resulting from the application of ursodeoxycholic acid was recapitulated by INT-777, an agonist of the Takeda G protein-coupled receptor 5 (TGR5), and by cevimeline, a muscarinic acetylcholine receptor agonist. Agonists to the nuclear receptors farnesoid X receptor, glucocorticoid receptor, pregnane X receptor, vitamin D receptor, and to the plasma membrane epidermal growth factor receptor did not modify baseline contractile patterns. These results demonstrate that gentle eversion of intact mouse ileum facilitates the quantification of longitudinal smooth muscle contractile responses to individual bile acids. Prokinetic effects of ursodeoxycholic acid and low-dose deoxycholic acid are replicated by agonists to TGR5 and muscarinic acetylcholine receptors.

胆汁酸调节胃肠道运动的机制尚不清楚。如果对某些胆汁酸的收缩反应需要直接作用于肠粘膜,那么标准的离体组织浴试验可能无法再现体内生理学。我们试图确定从完整的小鼠回肠片段量化平滑肌对胆汁酸的纵向收缩反应的可行性。我们分离了成年雌性 C57BL/6J 小鼠的回肠,将其轻轻绞断在有缺口的金属棒上,然后装入组织槽中。在浴槽中加入单个胆汁酸和胆汁酸受体激动剂,并通过等长力传导对纵向平滑肌收缩反应进行量化。熊去氧胆酸能以剂量依赖的方式强力增强收缩反应。脱氧胆酸在低剂量时能刺激收缩力,但在高剂量时会抑制收缩力。去氧胆酸、甘油胆酸和石胆酸不改变收缩力。武田 G 蛋白偶联受体 5(TGR5)激动剂 INT-777 和毒蕈碱乙酰胆碱受体激动剂塞维美林可再现熊去氧胆酸导致的收缩力增加的剂量依赖性。核受体法尼类固醇 X 受体、糖皮质激素受体、孕烷 X 受体、维生素 D 受体以及质膜表皮生长因子受体的激动剂不会改变基线收缩模式。这些结果表明,轻轻倒转完整的小鼠回肠有助于量化纵向平滑肌对单个胆汁酸的收缩反应。TGR5和毒蕈碱乙酰胆碱受体激动剂可复制熊去氧胆酸和小剂量去氧胆酸的促动力效应。
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引用次数: 0
Ovomemolins: Egg-derived peptides that improved cognitive decline after oral administration in mice 卵母细胞肽:从鸡蛋中提取的肽能改善小鼠口服后的认知功能衰退
IF 2.5 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-06-10 DOI: 10.1096/fba.2023-00149
Takanobu Nakajima, Maiko Shobako, Kentaro Kaneko, Atsushi Kurabayashi, Masaru Sato, Kousaku Ohinata

Eggs not only contain all the molecules necessary to nurture new life but are also rich in nutrients such as high-quality protein. For example, epidemiologic studies have shown that egg intake is positively correlated with cognitive function. Thus, we specifically examined the effect of ovalbumin, a major protein present in egg whites, on cognitive function. First, we found that an orally administered enzymatic digest of ovalbumin improves cognitive function in mice fed a high-fat diet. Then, we narrowed down candidate peptides based on the prediction of peptide production according to enzyme-substrate specificity and comprehensive peptide analysis of the digest. We found that three peptides, namely ILPEY, LYRGGLEP, and ILELP, improve cognitive function after oral administration. We also showed that ILPEY, LYRGGLEP, and ILELP were present in the digest and named them ovomemolins A (OMA), B, and C, respectively. Notably, ovomemolins are the first peptides derived from egg whites that have been shown to improve cognitive function. The cognitive improvement induced by OMA, the most abundant of the peptides in the digest, was inhibited by methyllycaconitine, an antagonist of α7nAChR, which is known to be related to memory. These results suggest that OMA improves cognitive function through the acetylcholine system. After OMA administration, brain-derived neurotrophic factor (BDNF) mRNA expression and the number of 5-bromo-2′-deoxyuridine-positive cells suggested that OMA increases hippocampal BDNF expression and neurogenesis.

鸡蛋不仅含有孕育新生命所需的所有分子,还富含优质蛋白质等营养物质。例如,流行病学研究表明,鸡蛋摄入量与认知功能呈正相关。因此,我们专门研究了蛋清中的主要蛋白质卵清蛋白对认知功能的影响。首先,我们发现口服卵清蛋白酶解物可改善高脂饮食小鼠的认知功能。然后,我们根据酶-底物特异性预测肽的产生,并对消化物进行了全面的肽分析,从而缩小了候选肽的范围。我们发现 ILPEY、LYRGGLEP 和 ILELP 这三种肽口服后能改善认知功能。我们还发现消化液中含有ILPEY、LYRGGLEP和ILELP,并将它们分别命名为卵模蛋白A(OMA)、B和C。值得注意的是,卵清蛋白是第一种从蛋清中提取并被证明能改善认知功能的肽。OMA是消化液中含量最高的一种肽,它对认知功能的改善作用受到甲基乌头原碱的抑制,而甲基乌头原碱是α7nAChR的拮抗剂,众所周知,α7nAChR与记忆有关。这些结果表明,OMA 可通过乙酰胆碱系统改善认知功能。服用 OMA 后,脑源性神经营养因子(BDNF)mRNA 的表达和 5-溴-2′-脱氧尿苷阳性细胞的数量表明,OMA 可增加海马 BDNF 的表达和神经发生。
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