Pub Date : 2026-01-19DOI: 10.1007/s10695-025-01629-1
Irtifa Fayaz, Syed Shariq Nazir Qadiri, Feroz Ahmad Shah, Shabir Ahmad Dar, Adnan Amin, Kafeela Mukhtar, Shahid Manzoor Mandu, Asifa Wali
Anaesthesia is a cornerstone of modern aquaculture practice playing a crucial role in routine fish husbandry procedures and research activities. The present review discusses about anaesthetic use in fish, including commonly used synthetic agents such as MS-222, benzocaine, metomidate, quinaldine, 2-phenoxyethanol, and propofol, together with emerging plant-derived anaesthetics, especially clove oil and other essential oils that have reduced environmental impact. Attention is drawn to the physiological basis of anaesthesia in relation to fish welfare, inclusive of both sedation and general anaesthesia, emphasizing their role in mitigating stress. The review outlines the classical stages of anaesthesia in fish and summarizes important physiological and biochemical responses associated with the use of various anaesthetics. Pharmacokinetic processes, including absorption, primarily across the gills, tissue distribution, metabolism, and excretion are also discussed. Regulatory regimes governing approved anaesthetics are summarized to highlight compliance requirements in aquaculture settings. Particular attention is paid to the use of anaesthetics during transport, where light sedation is shown to effectively decrease metabolic rate thereby significantly improving fish welfare. Finally, the review points towards emerging future directions including the development of eco-friendly plant-based anaesthetics and nanotechnology-enhanced formulations aimed at improving solubility, stability, and efficacy of anaesthetic agents.
{"title":"Anaesthetics in aquaculture: comprehensive insights into agents, mechanisms, and applications.","authors":"Irtifa Fayaz, Syed Shariq Nazir Qadiri, Feroz Ahmad Shah, Shabir Ahmad Dar, Adnan Amin, Kafeela Mukhtar, Shahid Manzoor Mandu, Asifa Wali","doi":"10.1007/s10695-025-01629-1","DOIUrl":"https://doi.org/10.1007/s10695-025-01629-1","url":null,"abstract":"<p><p>Anaesthesia is a cornerstone of modern aquaculture practice playing a crucial role in routine fish husbandry procedures and research activities. The present review discusses about anaesthetic use in fish, including commonly used synthetic agents such as MS-222, benzocaine, metomidate, quinaldine, 2-phenoxyethanol, and propofol, together with emerging plant-derived anaesthetics, especially clove oil and other essential oils that have reduced environmental impact. Attention is drawn to the physiological basis of anaesthesia in relation to fish welfare, inclusive of both sedation and general anaesthesia, emphasizing their role in mitigating stress. The review outlines the classical stages of anaesthesia in fish and summarizes important physiological and biochemical responses associated with the use of various anaesthetics. Pharmacokinetic processes, including absorption, primarily across the gills, tissue distribution, metabolism, and excretion are also discussed. Regulatory regimes governing approved anaesthetics are summarized to highlight compliance requirements in aquaculture settings. Particular attention is paid to the use of anaesthetics during transport, where light sedation is shown to effectively decrease metabolic rate thereby significantly improving fish welfare. Finally, the review points towards emerging future directions including the development of eco-friendly plant-based anaesthetics and nanotechnology-enhanced formulations aimed at improving solubility, stability, and efficacy of anaesthetic agents.</p>","PeriodicalId":12274,"journal":{"name":"Fish Physiology and Biochemistry","volume":"52 1","pages":"16"},"PeriodicalIF":2.5,"publicationDate":"2026-01-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145997761","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2026-01-16DOI: 10.1007/s10695-025-01630-8
Kang Chen, Pei-Yu Xie, Hong Liu, Ze-Xia Gao, Huan-Ling Wang
Global warming and aquaculture expansion are raising water temperatures and decreasing dissolved oxygen (DO) in freshwater environments, threatening fish survival. Revealing the molecular mechanisms of fish response to heat and/or hypoxia is vital for the development of sustainable aquaculture and genetic breeding strategies. This study examined the molecular adaptations of Megalobrama amblycephala, an important economic fish in China, to environmental stresses. Liver samples from fish subjected to hypoxia (LO), heat (HT), and their combination (HL) were analyzed using transcriptome and whole-genome methylation sequencing. Results indicated that environmental stresses significantly altered gene expression and DNA methylation levels in M. amblycephala, suggesting a molecular basis for enhanced environmental adaptability through metabolic regulation. Comparative analysis showed distinct differences in differentially expressed genes (DEGs) across the three stress groups, with the highest number occurring in the NC vs HL group, indicating a stronger transcriptional response. PPI analysis revealed significant alterations in metabolic pathway gene expression. Examination of the PPI network constructed from DEGs common to all stress groups pinpointed core metabolic regulators, such as the upregulated hk1 and aldoaa and the downregulated gck and fasn, highlighting a coordinated cellular metabolic adaptation to environmental stresses. DNA methylation analysis revealed CG-type methylation as the predominant pattern. The HL group exhibited elevated CHH and CHG methylation compared to other groups. Integration of DMR-promoter genes and DEGs yielded 12, 8, and 29 overlapping genes in the NC vs LO, NC vs HT, and NC vs HL groups, respectively. KEGG analysis of negatively regulated overlapping genes showed significantly enriched pathways: TGF-beta signaling pathway and endocytosis in the NC vs LO group; galactose metabolism and amino sugar and nucleotide sugar metabolism in the NC vs HT group; and other glycan degradation and various types of N-glycan biosynthesis in the NC vs HL group. These findings indicated that the adaptation of M. amblycephala to environmental changes is driven by coordinated changes in specific gene methylation and transcription levels, thereby fine-tuning physiological processes including intracellular signaling, glucose and glycoconjugate metabolism. These findings provide theoretical support for optimizing cultivation strategies of M. amblycephala.
全球变暖和水产养殖扩张导致淡水环境水温升高,溶解氧(DO)减少,威胁鱼类生存。揭示鱼类对高温和/或缺氧反应的分子机制对可持续水产养殖和遗传育种策略的发展至关重要。本文研究了中国重要的经济鱼类——大头鱼(Megalobrama amblycephala)对环境胁迫的分子适应性。采用转录组和全基因组甲基化测序技术对缺氧(LO)、高温(HT)及其联合作用下的鱼类肝脏样本进行分析。结果表明,环境胁迫显著改变了双头棘球蚴的基因表达和DNA甲基化水平,提示双头棘球蚴通过代谢调控增强环境适应性的分子基础。比较分析显示,在三个应激组中差异表达基因(DEGs)存在明显差异,NC组和HL组中差异表达基因(DEGs)的数量最多,表明转录反应更强。PPI分析显示代谢途径基因表达显著改变。通过检查由所有应激组共有的DEGs构建的PPI网络,确定了核心代谢调节因子,如上调的hk1和aldoaa以及下调的gck和fasn,强调了细胞对环境应激的协调代谢适应。DNA甲基化分析显示cg型甲基化为主要模式。与其他组相比,HL组CHH和CHG甲基化升高。dmr启动子基因与deg的整合在NC vs LO、NC vs HT和NC vs HL组中分别产生了12、8和29个重叠基因。负调控重叠基因的KEGG分析显示,NC组和LO组的tgf - β信号通路和内吞作用显著丰富;NC组与HT组的半乳糖代谢、氨基糖和核苷酸糖代谢;和其他聚糖的降解和各种类型的n -聚糖的生物合成。这些发现表明,双头棘球藻对环境变化的适应是由特定基因甲基化和转录水平的协调变化驱动的,从而微调了细胞内信号传导、葡萄糖和糖缀合物代谢等生理过程。这些发现为优化双头棘球蚴的培养策略提供了理论支持。
{"title":"Transcriptome and DNA methylation responses in the liver of Megalobrama amblycephala under hypoxia and heat stress.","authors":"Kang Chen, Pei-Yu Xie, Hong Liu, Ze-Xia Gao, Huan-Ling Wang","doi":"10.1007/s10695-025-01630-8","DOIUrl":"https://doi.org/10.1007/s10695-025-01630-8","url":null,"abstract":"<p><p>Global warming and aquaculture expansion are raising water temperatures and decreasing dissolved oxygen (DO) in freshwater environments, threatening fish survival. Revealing the molecular mechanisms of fish response to heat and/or hypoxia is vital for the development of sustainable aquaculture and genetic breeding strategies. This study examined the molecular adaptations of Megalobrama amblycephala, an important economic fish in China, to environmental stresses. Liver samples from fish subjected to hypoxia (LO), heat (HT), and their combination (HL) were analyzed using transcriptome and whole-genome methylation sequencing. Results indicated that environmental stresses significantly altered gene expression and DNA methylation levels in M. amblycephala, suggesting a molecular basis for enhanced environmental adaptability through metabolic regulation. Comparative analysis showed distinct differences in differentially expressed genes (DEGs) across the three stress groups, with the highest number occurring in the NC vs HL group, indicating a stronger transcriptional response. PPI analysis revealed significant alterations in metabolic pathway gene expression. Examination of the PPI network constructed from DEGs common to all stress groups pinpointed core metabolic regulators, such as the upregulated hk1 and aldoaa and the downregulated gck and fasn, highlighting a coordinated cellular metabolic adaptation to environmental stresses. DNA methylation analysis revealed CG-type methylation as the predominant pattern. The HL group exhibited elevated CHH and CHG methylation compared to other groups. Integration of DMR-promoter genes and DEGs yielded 12, 8, and 29 overlapping genes in the NC vs LO, NC vs HT, and NC vs HL groups, respectively. KEGG analysis of negatively regulated overlapping genes showed significantly enriched pathways: TGF-beta signaling pathway and endocytosis in the NC vs LO group; galactose metabolism and amino sugar and nucleotide sugar metabolism in the NC vs HT group; and other glycan degradation and various types of N-glycan biosynthesis in the NC vs HL group. These findings indicated that the adaptation of M. amblycephala to environmental changes is driven by coordinated changes in specific gene methylation and transcription levels, thereby fine-tuning physiological processes including intracellular signaling, glucose and glycoconjugate metabolism. These findings provide theoretical support for optimizing cultivation strategies of M. amblycephala.</p>","PeriodicalId":12274,"journal":{"name":"Fish Physiology and Biochemistry","volume":"52 1","pages":"14"},"PeriodicalIF":2.5,"publicationDate":"2026-01-16","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145988929","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2026-01-16DOI: 10.1007/s10695-026-01633-z
Raul Hernandez-Marchena, Álvaro De la Llave-Propín, Joaquín Solana-Gutiérrez, María Dolores Bejarano
In recent years, there has been growing interest in investigating hydropeaking's impact on rivers. In the case of fish, literature documents stranding, loss of spawning beds, and behavioural changes, while the physiological stress response is less understood. In this study, a natural flow scenario and five hydropeaking scenarios were simulated in a fluvial mesocosm named Greenchannel. Scenarios were characterised through hydraulic/hydrological (water velocity and level, water level fall rate, and frequency and number of inundations) and water quality (temperature, dissolved oxygen levels, turbidity) variables. Different test groups of 15 rainbow trout (Oncorhynchus mykiss) (n = 90) were subjected to these scenarios for 24 h each. Cortisol, creatine phosphokinase (CPK), lactate dehydrogenase (LDH), triglycerides (TGC), lactate, non-esterified fatty acids (NEFA), and histological pigmentation were measured at the end of the tests. The variation in physiological variables in response to the environmental variables characterising each scenario was assessed. The levels of cortisol, lactate, TGC, a pigmentation parameter (i.e. lightness), and water turbidity varied significantly with increasing intensities of hydropeaking, mainly velocity and rate of change of water levels. The mobilisation of metabolites suggests a prolonged stress response extending beyond the acute phase as a result of hydropeaking. Developed environment-physiology models pointed to specific environmental thresholds for rainbow trout (for instance, 0.1 m·s-1 (velocity) and 0.13 m·h-1 (rate of change (fall))) above which physiological impacts would lead to irreversible welfare problems. This study provides information on how and to what extent hydropeaking impacts fish communities, guiding the sustainable management of large hydropower plants and the restoration of affected rivers.
{"title":"Physiological stress response to hydropeaking in rainbow trout (Oncorhynchus mykiss).","authors":"Raul Hernandez-Marchena, Álvaro De la Llave-Propín, Joaquín Solana-Gutiérrez, María Dolores Bejarano","doi":"10.1007/s10695-026-01633-z","DOIUrl":"10.1007/s10695-026-01633-z","url":null,"abstract":"<p><p>In recent years, there has been growing interest in investigating hydropeaking's impact on rivers. In the case of fish, literature documents stranding, loss of spawning beds, and behavioural changes, while the physiological stress response is less understood. In this study, a natural flow scenario and five hydropeaking scenarios were simulated in a fluvial mesocosm named Greenchannel. Scenarios were characterised through hydraulic/hydrological (water velocity and level, water level fall rate, and frequency and number of inundations) and water quality (temperature, dissolved oxygen levels, turbidity) variables. Different test groups of 15 rainbow trout (Oncorhynchus mykiss) (n = 90) were subjected to these scenarios for 24 h each. Cortisol, creatine phosphokinase (CPK), lactate dehydrogenase (LDH), triglycerides (TGC), lactate, non-esterified fatty acids (NEFA), and histological pigmentation were measured at the end of the tests. The variation in physiological variables in response to the environmental variables characterising each scenario was assessed. The levels of cortisol, lactate, TGC, a pigmentation parameter (i.e. lightness), and water turbidity varied significantly with increasing intensities of hydropeaking, mainly velocity and rate of change of water levels. The mobilisation of metabolites suggests a prolonged stress response extending beyond the acute phase as a result of hydropeaking. Developed environment-physiology models pointed to specific environmental thresholds for rainbow trout (for instance, 0.1 m·s<sup>-1</sup> (velocity) and 0.13 m·h<sup>-1</sup> (rate of change (fall))) above which physiological impacts would lead to irreversible welfare problems. This study provides information on how and to what extent hydropeaking impacts fish communities, guiding the sustainable management of large hydropower plants and the restoration of affected rivers.</p>","PeriodicalId":12274,"journal":{"name":"Fish Physiology and Biochemistry","volume":"52 1","pages":"15"},"PeriodicalIF":2.5,"publicationDate":"2026-01-16","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12811275/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145988957","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2026-01-15DOI: 10.1007/s10695-026-01637-9
Katare M B, Mogalekar H S, Swami A M, Nayak S K, Singh M K, Kumar S, Sanjarambam Nirupama Chanu, Senpon Ngomle, Yengkhom Disco Singh
The production of monosex male populations is a cornerstone for the efficient aquaculture of Nile tilapia, Oreochromis niloticus (Linnaeus, 1758). The industry standard, methyltestosterone (MT), raises environmental concerns, necessitating alternative, targeted strategies. Aromatase inhibitors (AIs) offer a physiological approach by blocking estrogen synthesis, which is crucial for ovarian development. This study evaluated the efficacy of dietary administration of the potent non-steroidal AI, anastrozole, for inducing masculinization in Nile tilapia, assessing its effects on sex ratio, survival, gonadal histology, and key sex hormones. The post-yolk sac absorption fry were fed diets supplemented with anastrozole at 0 (control), 25, 50, 75, or 100 mg/kg for 30 days, followed by a 120-day grow-out phase. Phenotypic sex was determined, and gonadal histology was conducted for confirmation. Plasma levels of cortisol, testosterone, and estradiol (E2) were quantified using an ELISA kit. A dose-dependent increase in the proportion of males was observed, culminating in 100% phenotypic and histological males at the 100 mg/kg dose. Survival rates were significantly reduced at the 75 and 100 mg/kg doses. Hormonal analysis confirmed the mechanism of action: a dramatic, dose-dependent suppression of plasma E2 and a significant accumulation of testosterone in both sexes. Treatment also induced a significant stress response, as indicated by elevated cortisol levels. Dietary anastrozole is a highly effective alternative for producing 100% male Nile tilapia populations through targeted aromatase inhibition. The 75 mg/kg dose, yielding 91.43% males, is proposed as an optimal compromise for commercial application, balancing high masculinization efficiency with acceptable survival rates. The induced stress response warrants further investigation to optimize welfare protocols.
{"title":"Induction of masculinization in Nile Tilapia (Oreochromis niloticus) through Dietary Administration of Anastrozole: Histological and Hormonal Insights.","authors":"Katare M B, Mogalekar H S, Swami A M, Nayak S K, Singh M K, Kumar S, Sanjarambam Nirupama Chanu, Senpon Ngomle, Yengkhom Disco Singh","doi":"10.1007/s10695-026-01637-9","DOIUrl":"https://doi.org/10.1007/s10695-026-01637-9","url":null,"abstract":"<p><p>The production of monosex male populations is a cornerstone for the efficient aquaculture of Nile tilapia, Oreochromis niloticus (Linnaeus, 1758). The industry standard, methyltestosterone (MT), raises environmental concerns, necessitating alternative, targeted strategies. Aromatase inhibitors (AIs) offer a physiological approach by blocking estrogen synthesis, which is crucial for ovarian development. This study evaluated the efficacy of dietary administration of the potent non-steroidal AI, anastrozole, for inducing masculinization in Nile tilapia, assessing its effects on sex ratio, survival, gonadal histology, and key sex hormones. The post-yolk sac absorption fry were fed diets supplemented with anastrozole at 0 (control), 25, 50, 75, or 100 mg/kg for 30 days, followed by a 120-day grow-out phase. Phenotypic sex was determined, and gonadal histology was conducted for confirmation. Plasma levels of cortisol, testosterone, and estradiol (E2) were quantified using an ELISA kit. A dose-dependent increase in the proportion of males was observed, culminating in 100% phenotypic and histological males at the 100 mg/kg dose. Survival rates were significantly reduced at the 75 and 100 mg/kg doses. Hormonal analysis confirmed the mechanism of action: a dramatic, dose-dependent suppression of plasma E2 and a significant accumulation of testosterone in both sexes. Treatment also induced a significant stress response, as indicated by elevated cortisol levels. Dietary anastrozole is a highly effective alternative for producing 100% male Nile tilapia populations through targeted aromatase inhibition. The 75 mg/kg dose, yielding 91.43% males, is proposed as an optimal compromise for commercial application, balancing high masculinization efficiency with acceptable survival rates. The induced stress response warrants further investigation to optimize welfare protocols.</p>","PeriodicalId":12274,"journal":{"name":"Fish Physiology and Biochemistry","volume":"52 1","pages":"13"},"PeriodicalIF":2.5,"publicationDate":"2026-01-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145984660","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Taurine is considered a conditionally essential nutrient in several teleost fish; however, its metabolic role remains poorly understood in native South American species. In the present study, taurine metabolism was investigated in four aquaculture-relevant freshwater species: Pseudoplatystoma corruscans (spotted catfish), Piaractus mesopotamicus (pacu), Colossoma macropomum (tambaqui), and Arapaima gigas (pirarucu). Individuals were sampled from natural environments during spring and autumn, as well as from commercial aquaculture systems. The condition factor (K), gonadosomatic index (GSI), and hepatosomatic index (HSI) were calculated. Taurine concentrations were quantified in red muscle (RMtau), gonads (Gtau), and stomach contents (Dtau). Additionally, hepatic activities of cystathionine β-synthase (CBS) and cysteine sulphinic acid decarboxylase (CSD) were assessed. Path analysis revealed significant associations between dietary taurine intake, enzyme activity, and tissue taurine deposition. Principal component analysis showed that A. gigas exhibited distinct physiological and metabolic profiles compared to the other species. Taurine concentrations varied according to species, tissue, and origin (wild vs. farmed). Notably, higher taurine levels were detected in wild individuals of P. mesopotamicus and P. corruscans, while farmed C. macropomum and A. gigas exhibited elevated concentrations in specific tissues, such as stomach contents. These findings underscore the species-specific and environmentally modulated nature of taurine metabolism in Neotropical fishes and suggest potential conditional essentiality in A. gigas.
{"title":"Species-specific differences in taurine metabolism highlight conditional essentiality in native South American aquaculture species.","authors":"Cristielle Nunes Souto, Ludmila Lopes Castro Menezes, Denise Silva Oliveira, Adriano Carvalho Costa, Igo Gomes Guimarães","doi":"10.1007/s10695-025-01622-8","DOIUrl":"https://doi.org/10.1007/s10695-025-01622-8","url":null,"abstract":"<p><p>Taurine is considered a conditionally essential nutrient in several teleost fish; however, its metabolic role remains poorly understood in native South American species. In the present study, taurine metabolism was investigated in four aquaculture-relevant freshwater species: Pseudoplatystoma corruscans (spotted catfish), Piaractus mesopotamicus (pacu), Colossoma macropomum (tambaqui), and Arapaima gigas (pirarucu). Individuals were sampled from natural environments during spring and autumn, as well as from commercial aquaculture systems. The condition factor (K), gonadosomatic index (GSI), and hepatosomatic index (HSI) were calculated. Taurine concentrations were quantified in red muscle (RMtau), gonads (Gtau), and stomach contents (Dtau). Additionally, hepatic activities of cystathionine β-synthase (CBS) and cysteine sulphinic acid decarboxylase (CSD) were assessed. Path analysis revealed significant associations between dietary taurine intake, enzyme activity, and tissue taurine deposition. Principal component analysis showed that A. gigas exhibited distinct physiological and metabolic profiles compared to the other species. Taurine concentrations varied according to species, tissue, and origin (wild vs. farmed). Notably, higher taurine levels were detected in wild individuals of P. mesopotamicus and P. corruscans, while farmed C. macropomum and A. gigas exhibited elevated concentrations in specific tissues, such as stomach contents. These findings underscore the species-specific and environmentally modulated nature of taurine metabolism in Neotropical fishes and suggest potential conditional essentiality in A. gigas.</p>","PeriodicalId":12274,"journal":{"name":"Fish Physiology and Biochemistry","volume":"52 1","pages":"12"},"PeriodicalIF":2.5,"publicationDate":"2026-01-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145965606","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2026-01-07DOI: 10.1007/s10695-025-01632-6
Jinzhi Yu, Naixuan Wang, Lijun Liu, Hong Zhou, Anying Zhang, Xinyan Wang
S100A10 protein, a member of S100 protein family, has been extensively studied in mammalian models. In fish species, evolution of S100 proteins including S100A10 has been clarified, revealing that two paralogous genes, S100A10a and S100A10b, arose in teleosts through the fish-specific whole-genome duplication event. However, the functional roles of fish S100A10 genes remain largely uncharacterized. In the present study, we identified two S100A10 homologs in grass carp, designated gcS100A10a and gcS100A10b, and demonstrated that their mRNA is highly expressed in grass carp skin and strongly upregulated after skin trauma by real-time quantitative PCR. Using the fish epithelial cell line, Epithelioma papulosum cyprini (EPC) cells, as a model, we showed that overexpression of gcS100A10a or gcS100A10b enhances cell viability, increases expression of proliferating cell nuclear antigen (PCNA), and promotes DNA synthesis, thereby demonstrating their capacity to stimulate cell proliferation. Flow cytometric analysis further uncovered that both proteins accelerate EPC cell cycle progression by promoting transition into the S and G2/M phases. Additionally, gcS100A10a and gcS100A10b significantly elevate EPC cell migration and this elevation is attenuated by a broad-spectrum matrix metalloproteinase (MMP) inhibitor, GM6001, suggesting involvement of MMP activity in this process. This suggestion is strongly supported by findings that overexpression of gcS100A10a or gcS100A10b increases extracellular MMP activity and decreases intracellular MMP accumulation although MMP-2/MMP-9 mRNA levels remain unchanged. Collectively, these results demonstrate the positive regulation of gcS100A10a and gcS100A10b on fish epithelial cell proliferation and migration, together with their high and injury-inducible expression in grass carp skin, indicating their possible involvement in fish skin wound healing.
{"title":"Grass carp S100A10a/10b, two skin wound-induced genes, augment epithelial cell proliferation and migration in vitro.","authors":"Jinzhi Yu, Naixuan Wang, Lijun Liu, Hong Zhou, Anying Zhang, Xinyan Wang","doi":"10.1007/s10695-025-01632-6","DOIUrl":"https://doi.org/10.1007/s10695-025-01632-6","url":null,"abstract":"<p><p>S100A10 protein, a member of S100 protein family, has been extensively studied in mammalian models. In fish species, evolution of S100 proteins including S100A10 has been clarified, revealing that two paralogous genes, S100A10a and S100A10b, arose in teleosts through the fish-specific whole-genome duplication event. However, the functional roles of fish S100A10 genes remain largely uncharacterized. In the present study, we identified two S100A10 homologs in grass carp, designated gcS100A10a and gcS100A10b, and demonstrated that their mRNA is highly expressed in grass carp skin and strongly upregulated after skin trauma by real-time quantitative PCR. Using the fish epithelial cell line, Epithelioma papulosum cyprini (EPC) cells, as a model, we showed that overexpression of gcS100A10a or gcS100A10b enhances cell viability, increases expression of proliferating cell nuclear antigen (PCNA), and promotes DNA synthesis, thereby demonstrating their capacity to stimulate cell proliferation. Flow cytometric analysis further uncovered that both proteins accelerate EPC cell cycle progression by promoting transition into the S and G2/M phases. Additionally, gcS100A10a and gcS100A10b significantly elevate EPC cell migration and this elevation is attenuated by a broad-spectrum matrix metalloproteinase (MMP) inhibitor, GM6001, suggesting involvement of MMP activity in this process. This suggestion is strongly supported by findings that overexpression of gcS100A10a or gcS100A10b increases extracellular MMP activity and decreases intracellular MMP accumulation although MMP-2/MMP-9 mRNA levels remain unchanged. Collectively, these results demonstrate the positive regulation of gcS100A10a and gcS100A10b on fish epithelial cell proliferation and migration, together with their high and injury-inducible expression in grass carp skin, indicating their possible involvement in fish skin wound healing.</p>","PeriodicalId":12274,"journal":{"name":"Fish Physiology and Biochemistry","volume":"52 1","pages":"11"},"PeriodicalIF":2.5,"publicationDate":"2026-01-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145910641","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2026-01-05DOI: 10.1007/s10695-025-01626-4
Samra Farooq, Samra Shafqat, Jabbir Ali Khan, Ahmad Waheed, Ali Umar, Muhammad Saleem Khan
Myo-inositol oxygenase (MIOX) plays an essential role in metabolic pathways and cell processes, controls oxidative stress response mechanisms, and balances osmotic stress in aquatic organisms. Molecular docking and structural analysis of the MIOX gene have been accomplished in this work. The MIOX gene has a length of 3608 bp, which encodes 286 amino acids (AA). The secondary structure revealed α-helical and random coils containing 40.56% alpha helices, 38.81% random coils, 14.69% extended strands, and 5.94% beta turns. The subcellular localization results showed that 56% of the MIOX gene is found in cytoplasm and then 10% in lysosome. The Ramachandran plot analysis showed that 90.2% of residues fall in the most favored region and 9.8% in the additional allowed region. Virtual screening of ligands and molecular docking of inositol (CID-892) and D-glucuronic acid (CID-94715) showed the highest docking score values of - 4.015 and - 3.563, respectively. The Potential Energy OPLS3e was - 1632.608 and - 1545.687. Inositol and D-glucuronic acid interacted with different residues of MIOX protein. However, a greater binding affinity of MIOX was observed with inositol than with D-glucuronic acid. This signifies the biochemical role of inositol that helps in determining the enzymatic efficiency. So, this study offers insights into protein modeling, molecular docking, and virtual screening of ligands against the MIOX receptor, revealing aspects of drug design and preventive approaches for fish salinity tolerance.
{"title":"In silico characterization and molecular docking of the MIOX gene in Nile tilapia (Oreochromis niloticus).","authors":"Samra Farooq, Samra Shafqat, Jabbir Ali Khan, Ahmad Waheed, Ali Umar, Muhammad Saleem Khan","doi":"10.1007/s10695-025-01626-4","DOIUrl":"https://doi.org/10.1007/s10695-025-01626-4","url":null,"abstract":"<p><p>Myo-inositol oxygenase (MIOX) plays an essential role in metabolic pathways and cell processes, controls oxidative stress response mechanisms, and balances osmotic stress in aquatic organisms. Molecular docking and structural analysis of the MIOX gene have been accomplished in this work. The MIOX gene has a length of 3608 bp, which encodes 286 amino acids (AA). The secondary structure revealed α-helical and random coils containing 40.56% alpha helices, 38.81% random coils, 14.69% extended strands, and 5.94% beta turns. The subcellular localization results showed that 56% of the MIOX gene is found in cytoplasm and then 10% in lysosome. The Ramachandran plot analysis showed that 90.2% of residues fall in the most favored region and 9.8% in the additional allowed region. Virtual screening of ligands and molecular docking of inositol (CID-892) and D-glucuronic acid (CID-94715) showed the highest docking score values of - 4.015 and - 3.563, respectively. The Potential Energy OPLS3e was - 1632.608 and - 1545.687. Inositol and D-glucuronic acid interacted with different residues of MIOX protein. However, a greater binding affinity of MIOX was observed with inositol than with D-glucuronic acid. This signifies the biochemical role of inositol that helps in determining the enzymatic efficiency. So, this study offers insights into protein modeling, molecular docking, and virtual screening of ligands against the MIOX receptor, revealing aspects of drug design and preventive approaches for fish salinity tolerance.</p>","PeriodicalId":12274,"journal":{"name":"Fish Physiology and Biochemistry","volume":"52 1","pages":"10"},"PeriodicalIF":2.5,"publicationDate":"2026-01-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145899682","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2026-01-04DOI: 10.1007/s10695-025-01628-2
Laura Rojas, Andreas Ruser, Johannes Baltzer, Clément Crouzet, Michael Schlachter, Joseph Schnitzler, Ursula Siebert, Maria Morell
Expanding our understanding of auditory sensitivity in fishes is essential not only for advancing sensory biology, but also for assessing the impact of underwater noise on marine life. However, knowledge remains limited for many ecologically and commercially relevant marine species, particularly auditory generalists like the European sea bass (Dicentrarchus labrax). In this study, we used auditory evoked potentials (AEPs) to measure hearing thresholds in 114 juvenile European sea bass across six frequencies (100-600 Hz), representing the largest dataset of its kind for this species. Our results revealed a U-shaped audiogram with highest sensitivity at 300 Hz (mean threshold: 116.8 ± 3.3 dB re 1 µPa), and thresholds up to 22 dB lower than previously reported. These findings suggest that D. labrax has higher auditory sensitivity than previously assumed. We also documented significant interindividual variability in hearing thresholds, particularly at lower frequencies, highlighting the importance of large sample sizes to capture natural variation. These baseline data provide a valuable reference for future studies on acoustic ecology, effects of noise exposure, and welfare optimization in aquaculture settings, and emphasize the need for further auditory research in marine fish species.
扩大我们对鱼类听觉敏感性的理解不仅对推进感官生物学,而且对评估水下噪音对海洋生物的影响至关重要。然而,对许多与生态和商业相关的海洋物种的了解仍然有限,特别是听觉通才,如欧洲海鲈鱼(Dicentrarchus labrax)。在这项研究中,我们使用听觉诱发电位(AEPs)测量了114只幼年欧洲海鲈鱼在6个频率(100-600 Hz)上的听力阈值,这是该物种同类数据中最大的数据集。我们的研究结果显示,u形听力图在300 Hz时灵敏度最高(平均阈值:116.8±3.3 dB re 1µPa),阈值比先前报道的低22 dB。这些发现表明,d.l abrax的听觉敏感度比之前假设的要高。我们还记录了听力阈值的显著个体差异,特别是在较低的频率,强调了大样本量对捕获自然变化的重要性。这些基线数据为未来水产养殖环境中声生态学、噪声暴露效应和福利优化的研究提供了有价值的参考,并强调了进一步研究海洋鱼类听觉的必要性。
{"title":"Hearing thresholds in European sea bass (Dicentrarchus labrax): new insights into auditory sensitivity.","authors":"Laura Rojas, Andreas Ruser, Johannes Baltzer, Clément Crouzet, Michael Schlachter, Joseph Schnitzler, Ursula Siebert, Maria Morell","doi":"10.1007/s10695-025-01628-2","DOIUrl":"10.1007/s10695-025-01628-2","url":null,"abstract":"<p><p>Expanding our understanding of auditory sensitivity in fishes is essential not only for advancing sensory biology, but also for assessing the impact of underwater noise on marine life. However, knowledge remains limited for many ecologically and commercially relevant marine species, particularly auditory generalists like the European sea bass (Dicentrarchus labrax). In this study, we used auditory evoked potentials (AEPs) to measure hearing thresholds in 114 juvenile European sea bass across six frequencies (100-600 Hz), representing the largest dataset of its kind for this species. Our results revealed a U-shaped audiogram with highest sensitivity at 300 Hz (mean threshold: 116.8 ± 3.3 dB re 1 µPa), and thresholds up to 22 dB lower than previously reported. These findings suggest that D. labrax has higher auditory sensitivity than previously assumed. We also documented significant interindividual variability in hearing thresholds, particularly at lower frequencies, highlighting the importance of large sample sizes to capture natural variation. These baseline data provide a valuable reference for future studies on acoustic ecology, effects of noise exposure, and welfare optimization in aquaculture settings, and emphasize the need for further auditory research in marine fish species.</p>","PeriodicalId":12274,"journal":{"name":"Fish Physiology and Biochemistry","volume":"52 1","pages":"9"},"PeriodicalIF":2.5,"publicationDate":"2026-01-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12764546/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145896355","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Understanding how fishes physiologically cope with contrasting environmental conditions is fundamental to linking trophic ecology with ecosystem function. This study compared erythropoietic and osmoregulatory strategies across fishes representing distinct feeding niches inhabiting two ecologically divergent tropical ecoregions-the freshwater hill streams of the Sub-Himalayan Terai-Dooars and the estuarine rivers of the Indian Sundarbans. Flow cytometric analyses revealed significantly higher Na⁺/K⁺-ATPase protein expression and chloride-cell abundance among carnivorous species of the Sundarbans, followed by omnivores and herbivores (Welch's ANOVA; t-tests). Conversely, hill-stream carnivores exhibited elevated erythropoietic activity and reactive oxygen species (ROS) generation, reflecting enhanced oxygen demand under hypoxic and fast-flowing conditions. Integrative modelling using Random Forest classification and quantile regression demonstrated that trophic guild identity, ecoregional attributes, and their interaction significantly influenced cellular-level variation, delineating distinct physiological traits across ecosystems. Collectively, the findings reveal ecoregion-specific physiological trait syndromes that align with trophic strategies, reflecting adaptive responses to local salinity, oxygen, and flow regimes. These results highlight how organismal physiology mechanistically links trophic ecology with environmental constraints across contrasting tropical ecosystems, offering predictive insight into species resilience and adaptive potential under changing climatic regimes.
{"title":"Ecophysiological variance within fish populations occupying different trophic niches of contrasting ecoregions.","authors":"Anupam Podder, Soumyadip Panja, Atreyee Chaudhuri, Krishna Gangopadhyay, Sumit Homechaudhuri","doi":"10.1007/s10695-025-01611-x","DOIUrl":"https://doi.org/10.1007/s10695-025-01611-x","url":null,"abstract":"<p><p>Understanding how fishes physiologically cope with contrasting environmental conditions is fundamental to linking trophic ecology with ecosystem function. This study compared erythropoietic and osmoregulatory strategies across fishes representing distinct feeding niches inhabiting two ecologically divergent tropical ecoregions-the freshwater hill streams of the Sub-Himalayan Terai-Dooars and the estuarine rivers of the Indian Sundarbans. Flow cytometric analyses revealed significantly higher Na⁺/K⁺-ATPase protein expression and chloride-cell abundance among carnivorous species of the Sundarbans, followed by omnivores and herbivores (Welch's ANOVA; t-tests). Conversely, hill-stream carnivores exhibited elevated erythropoietic activity and reactive oxygen species (ROS) generation, reflecting enhanced oxygen demand under hypoxic and fast-flowing conditions. Integrative modelling using Random Forest classification and quantile regression demonstrated that trophic guild identity, ecoregional attributes, and their interaction significantly influenced cellular-level variation, delineating distinct physiological traits across ecosystems. Collectively, the findings reveal ecoregion-specific physiological trait syndromes that align with trophic strategies, reflecting adaptive responses to local salinity, oxygen, and flow regimes. These results highlight how organismal physiology mechanistically links trophic ecology with environmental constraints across contrasting tropical ecosystems, offering predictive insight into species resilience and adaptive potential under changing climatic regimes.</p>","PeriodicalId":12274,"journal":{"name":"Fish Physiology and Biochemistry","volume":"52 1","pages":"7"},"PeriodicalIF":2.5,"publicationDate":"2025-12-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145846459","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-12-27DOI: 10.1007/s10695-025-01624-6
Ayşe Nur Erdemir, Ahmet Regaib Oğuz
Van fish live in Lake Van, which has different physicochemical properties from freshwater and seawater ecosystems. Every year, Van fish migrate from Lake Van, which has extreme physicochemical properties, to the freshwater flowing into the lake to reproduce. During this migration, they are exposed to stress due to the different properties of the aquatic habitats. In this study, changes in the kidney tissue of Van fish during the spawning migration downstream and in freshwater were examined morphometrically, histologically, biochemically, and immunohistochemically. It was observed that proximal tubule area and diameter, collecting duct area and diameter, glomerulus area, Bowman's capsule area, and glomerulus numbers changed in the kidneys of fish sampled from downstream and freshwater. Na + /K + ATPase transmembrane proteins (NKA) and apoptotic cells were immunohistochemically labeled in both aquatic areas in the kidney tissue. While relative cells containing NKA were determined to be dense in stream samples, apoptotic cells were determined to be more numerous in the kidney tissue sampled from the downstream environment. Plasma urea, uric acid, and sodium were high in downstream, while creatinine, chloride, magnesium, and potassium were also high in freshwater. As a result, it was determined that changes in the morphological structure and histology of the kidney tissue of Van fish were necessary for adaptation in different aquatic habitats.
{"title":"Histological and immunohistochemical responses of the kidney in Van fish (Alburnus tarichi) during upstream migration.","authors":"Ayşe Nur Erdemir, Ahmet Regaib Oğuz","doi":"10.1007/s10695-025-01624-6","DOIUrl":"https://doi.org/10.1007/s10695-025-01624-6","url":null,"abstract":"<p><p>Van fish live in Lake Van, which has different physicochemical properties from freshwater and seawater ecosystems. Every year, Van fish migrate from Lake Van, which has extreme physicochemical properties, to the freshwater flowing into the lake to reproduce. During this migration, they are exposed to stress due to the different properties of the aquatic habitats. In this study, changes in the kidney tissue of Van fish during the spawning migration downstream and in freshwater were examined morphometrically, histologically, biochemically, and immunohistochemically. It was observed that proximal tubule area and diameter, collecting duct area and diameter, glomerulus area, Bowman's capsule area, and glomerulus numbers changed in the kidneys of fish sampled from downstream and freshwater. Na + /K + ATPase transmembrane proteins (NKA) and apoptotic cells were immunohistochemically labeled in both aquatic areas in the kidney tissue. While relative cells containing NKA were determined to be dense in stream samples, apoptotic cells were determined to be more numerous in the kidney tissue sampled from the downstream environment. Plasma urea, uric acid, and sodium were high in downstream, while creatinine, chloride, magnesium, and potassium were also high in freshwater. As a result, it was determined that changes in the morphological structure and histology of the kidney tissue of Van fish were necessary for adaptation in different aquatic habitats.</p>","PeriodicalId":12274,"journal":{"name":"Fish Physiology and Biochemistry","volume":"52 1","pages":"8"},"PeriodicalIF":2.5,"publicationDate":"2025-12-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145846483","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}