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The gyk-foxq1 regulatory axis serves as a novel target and provides a breeding indicator for glucose homeostasis regulation in Micropterus salmoides. gyk-foxq1调控轴作为一种新的靶点,为沙颡鱼的葡萄糖稳态调控提供了一种育种指标。
IF 2.5 3区 农林科学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2025-11-10 DOI: 10.1007/s10695-025-01601-z
Caixia Lei, Hangru Song, Hongmei Song, Jinxing Du, Tao Zhu, Jing Tian, Shengjie Li

Improving farmed fish carbohydrate utilization reduces the feed fish meal level and lessens water pollution. Herein, the effects of glycerol kinase (gyk) and forkhead box (fox)-q1 on Micropterus salmoides glucose homeostasis were investigated, and a growth-linked marker in gyk on a carbohydrate-rich diet was developed. The data showed that gyk and foxq1 expression is negatively correlated with plasma glucose level. Although gyk and foxq1 showed no effect on plasma triglyceride, cholesterol, low-density lipoprotein cholesterol, high-density lipoprotein cholesterol, hepatic triglyceride, and muscular triglyceride content, positive regulation of insulin secretion, hepatic glycogen, and muscular glycogen level was observed. Overexpression and shRNA-mediated knockdown assays indicated that gyk and foxq1 positively regulate hepatic and muscular gene expression involved in triglyceride synthesis (fatty acid synthetase, acetyl-CoA carboxylase), glycolysis (phosphofructokinase, glucokinase), glycogen synthesis (glycogen synthase), and pentose phosphate pathway (glucose-6-phosphate dehydrogenase), but negatively regulate gluconeogenesis gene (phosphoenolpyruvate carboxykinase, glucose-6-phosphatase). In vitro, - 1652 ~  - 2056 bp was determined to be the core promoter sequence of gyk using progressive deletion. Luciferase activity showed that gyk promoter activity decreased following foxq1 binding site mutation in this sequence, and it was enhanced by foxq1 overexpression. Moreover, foxq1 inhibition attenuated hypoglycemia induced by gyk overexpression, and its suppression relieved the increase in gyk-mediated plasma glucose. Besides, an insertion-deletion marker located at rs16857996 in gyk was developed. Individuals without deletion (aaaac) of this site had higher body weight, full length, and body length. This regulatory axis provides a theoretical target and breeding indicator for increasing carbohydrate utilization and reducing the dietary fish meal in M. salmoides.

提高养殖鱼类碳水化合物利用率可降低饲料鱼粉水平,减少水污染。本研究研究了甘油激酶(gyk)和叉头箱(fox)-q1对小翼鱼(Micropterus salmoides)葡萄糖稳态的影响,并开发了富含碳水化合物饮食中gyk的生长相关标记物。数据显示,gyk和foxq1的表达与血糖水平呈负相关。虽然gyk和foxq1对血浆甘油三酯、胆固醇、低密度脂蛋白胆固醇、高密度脂蛋白胆固醇、肝脏甘油三酯和肌肉甘油三酯含量没有影响,但对胰岛素分泌、肝糖原和肌肉糖原水平有正向调节作用。过表达和shrna介导的敲低实验表明,gyk和foxq1正调控甘油三酯合成(脂肪酸合成酶、乙酰辅酶a羧化酶)、糖酵解(磷酸果糖激酶、葡萄糖激酶)、糖原合成(糖原合成酶)和戊糖磷酸途径(葡萄糖-6-磷酸脱氢酶)的肝脏和肌肉基因表达,负调控糖异生基因(磷酸烯醇丙酮酸羧激酶、葡萄糖-6-磷酸酶)的表达。在体外,采用渐进式缺失法确定- 1652 ~ - 2056 bp为gyk的核心启动子序列。荧光素酶活性表明,在该序列foxq1结合位点突变后,gyk启动子活性降低,foxq1过表达增强了荧光素酶活性。此外,foxq1抑制可减轻gyk过表达引起的低血糖,抑制foxq1可缓解gyk介导的血糖升高。此外,我们还在gyk中开发了一个位于rs16857996的插入-删除标记。该位点未缺失个体(aaaac)的体重、全长和体长均较高。这条调节轴为沙门鱼提高碳水化合物利用和减少饲料鱼粉提供了理论靶点和育种指标。
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引用次数: 0
A spontaneously immortalized cell line from the muscle of red sea bream (Pagrus major). 从红鲷(大鲷)的肌肉中自发地永生的细胞系。
IF 2.5 3区 农林科学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2025-11-08 DOI: 10.1007/s10695-025-01603-x
Mikinori Ueno, Yu Yamaguchi, Asami Yoshida, Katsuya Hirasaka, Natsumi Takahashi, Tomoko Kadowaki, Takayuki Tsukuba, Kenichi Yamaguchi

Cell culture plays a crucial role in various fields of life science research such as cancer, immunology, and virology. Numerous cell lines have been established in mammals, while fish cell lines remain comparatively limited in number. This study established a spontaneously immortalized cell line from the muscle of red sea bream, Pagrus major, which is a commercially important fish in Japan. Primary cells were isolated from muscle tissue using 0.2% collagenase and cultured in Leibovitz's L-15 medium without CO2. The cells required fetal bovine serum in a dose-dependent manner at 28 °C for optimal growth. The cells were also able to grow in F12 medium, but not in Dulbecco's modified Eagle's medium. RNA-sequencing analysis raised the possibility that myosatellite cells/myoblasts in primary culture would gradually be replaced with fibroblasts or epithelial-like cells with an increasing number of passages because collagen-related genes were expressed more than in muscle tissue. Upon serum starvation, the cells differentiated into adipocyte-like cells because of slight lipid accumulation. Therefore, the established cells were considered to lack myogenic potential. In conclusion, we established the Nagasaki University Fisheries-P. major 1 (NUF-PM1) cell line, which consisted of fibroblast/epithelial-like cells, but not myosatellite cells/myoblasts, from the muscle of P. major, and we observed the cells over 80 passages. This study adds to the limited number of fish cell lines available for research, which can be used to develop fish cultured meat and as a model for fish adipocyte differentiation.

细胞培养在癌症、免疫学和病毒学等生命科学研究的各个领域起着至关重要的作用。哺乳动物已经建立了许多细胞系,而鱼类细胞系的数量仍然相对有限。这项研究从日本重要的商业鱼类红鲷鱼(Pagrus major)的肌肉中建立了一种自发永生的细胞系。使用0.2%胶原酶从肌肉组织中分离原代细胞,并在无CO2的Leibovitz's L-15培养基中培养。细胞在28°C条件下需要剂量依赖性的胎牛血清才能达到最佳生长。这些细胞也能在F12培养基中生长,但不能在Dulbecco改良的Eagle培养基中生长。rna测序分析提出了一种可能性,即原代培养中的肌卫星细胞/成肌细胞将逐渐被成纤维细胞或上皮样细胞所取代,因为胶原相关基因的表达比肌肉组织中更多。血清饥饿后,由于脂质积累,细胞分化为脂肪细胞样细胞。因此,建立的细胞被认为缺乏成肌潜能。最后,我们建立了长崎大学渔业研究所。主要1 (NUF-PM1)细胞系,由成纤维细胞/上皮样细胞组成,而不是肌卫星细胞/成肌细胞,我们观察了80多次传代的细胞。该研究增加了有限的鱼类细胞系可供研究,可用于开发鱼养殖肉和作为鱼类脂肪细胞分化的模型。
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引用次数: 0
Functional Analysis of the mstn1 Gene and Its Transcriptional Regulation by Mef2 Factors in Yellowfin Seabream, Acanthopagrus latus (Hottuyn, 1782). 棘棘鱼(Acanthopagrus latus)中mstn1基因的功能分析及其Mef2因子的转录调控(Hottuyn, 1782)。
IF 2.5 3区 农林科学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2025-11-08 DOI: 10.1007/s10695-025-01606-8
Hong-Xi He, Ke-Cheng Zhu, Bao-Suo Liu, Hua-Yang Guo, Nan Zhang, Lin Xian, Teng-Fei Zhu, Dian-Chang Zhang, Min Yang

Myocyte Enhancer Factor 2 (Mef2) is a transcription factor that exert crucial functions in muscle cells, neurons and other cell types. These Mef2 family members modulate the expression of target genes to participate in a broad spectrum of biological processes, such as, but not restricted to, muscle differentiation and heart development. Myostatin (mstn), a protein from the Transforming Growth Factor-β (TGF-β) superfamily, is of great significance in muscle growth and development. Its principal function lies in suppressing the proliferation and differentiation of skeletal muscle cells, thus controlling muscle mass. In this study, we obtained the genomic sequence of mstn1 from Acanthopagrus latus, which is 2,198 bp in length and encodes 384 amino acids. It consists of three distinct domains: a TGF-β domain, a TGF-β propeptide domain and a signal peptide. Through phylogenetic analysis, it was found that mstn1 and mstn2 from A. latus are closely grouped with those from Sparus aurata, which implies a high level of similarity between the two species. Additionally, mstn1 was mainly expressed in the brain, white muscle, and skin. To further investigate the regulatory mechanisms underlying mstn1 in muscle growth, we analyzed the transcriptional levels of mstn1 in white muscle under conditions of starvation and refeeding. The results indicated that during the 56-day experimental period, the expression of the mstn1 gene decreased notably as the starvation period extended. Truncation experiments revealed that the region from - 645 to + 112 bp constitutes the core promoter region responsive to Mef2a and Mef2b. The point mutation analysis verified that the transcriptional activity of mstn1 is contingent upon the mutation of binding site 3 (M3) regulated by Mef2a and Mef2b. Moreover, siRNA-mediated knockdown experiments demonstrated that downregulation of mef2a or mef2b significantly decreased the transcription of mstn1. These findings provide novel insights into how Mef2 transcription factors regulate mstn1 expression, enhancing our understanding of the molecular mechanisms underlying muscle development in teleost fish.

肌细胞增强因子2 (Myocyte Enhancer Factor 2, Mef2)是一种在肌肉细胞、神经元和其他细胞类型中发挥重要功能的转录因子。这些Mef2家族成员调节靶基因的表达,参与广泛的生物过程,如但不限于肌肉分化和心脏发育。肌生长抑制素(mstn)是转化生长因子-β (TGF-β)超家族中的一种蛋白,在肌肉生长发育中具有重要意义。其主要功能是抑制骨骼肌细胞的增殖和分化,从而控制肌肉质量。在本研究中,我们获得了棘草(Acanthopagrus latus) mstn1的基因组序列,全长2198 bp,编码384个氨基酸。它由三个不同的结构域组成:一个TGF-β结构域,一个TGF-β前肽结构域和一个信号肽。通过系统发育分析,发现拉胡麻的mstn1和mstn2与Sparus aurata的mstn1和mstn2类群较为接近,表明两者具有较高的相似性。此外,mstn1主要在脑、白肌和皮肤中表达。为了进一步研究mstn1在肌肉生长中的调控机制,我们分析了饥饿和再喂养条件下白色肌肉中mstn1的转录水平。结果表明,在56 d的试验期内,mstn1基因的表达量随着饥饿时间的延长而显著降低。截断实验表明- 645 ~ + 112 bp的区域构成了Mef2a和Mef2b的核心启动子区域。点突变分析证实mstn1的转录活性取决于Mef2a和Mef2b调控的结合位点3 (M3)的突变。此外,sirna介导的敲低实验表明,mef2a或mef2b的下调显著降低了mstn1的转录。这些发现为Mef2转录因子如何调节mstn1表达提供了新的见解,增强了我们对硬骨鱼肌肉发育的分子机制的理解。
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引用次数: 0
Synergistic taurine and methionine supplementation enhances growth and cholesterol regulation in Totoaba macdonaldi. 牛磺酸和蛋氨酸协同补充促进了麦当劳石首鱼的生长和胆固醇调节。
IF 2.5 3区 农林科学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2025-11-07 DOI: 10.1007/s10695-025-01590-z
Omar Aguillón-Hernández, María Teresa Viana, José A Mata-Sotres, Ceres A Molina-Cárdenas, Fernando Barreto-Curiel

Totoaba (Totoaba macdonaldi) aquaculture offers economic and ecological advantages. However, its culture still relies on fishmeal in diets because alternative protein sources show reduced productive performance. The current study assessed the impact of low concentrations of methionine and taurine together with alternative proteins, on the productive performance of T. macdonaldi over a 60-day experimental period. Four diets were formulated for this purpose, a basal diet (D-BD), the basal diet with methionine (D-MET), the basal diet with taurine (D-TAU), and the basal diet with methionine and taurine (D-MET + TAU). The present experiment used a randomized design. One hundred forty-four juveniles (41.0 ± 0.5 g in weight) were randomly distributed in 12 tanks (500 L) in triplicate groups to assess biological indices, cholesterol content, hepatic gene expression, and the synthesis and transport of taurine. The statistical analysis revealed that the dietary treatments D-MET and D-TAU positively affected the growth rate, whereas their interaction resulted in a significantly higher growth (p < 0.05). The expression of the igf-1 gene in the liver increased and showed a positive interaction. When TAU and MET were limited, there was an observed overexpression of csad in hepatic tissue. Diets supplemented with TAU showed a decrease in total cholesterol level, whereas cholesterol level in the liver increased with MET supplemented alone. Total TAU content in fish tissues was significantly higher when both TAU and MET were supplemented. In conclusion, T. macdonaldi exhibits a limited capacity, for TAU synthesis, and MET limitation appears to restrict growth potential.

石首鱼(Totoaba macdonald di)养殖具有经济和生态优势。然而,它的养殖仍然依赖于饲料中的鱼粉,因为替代蛋白质来源会降低生产性能。目前的研究评估了低浓度的蛋氨酸和牛磺酸以及替代蛋白质对T. macdonaldi生产性能的影响,为期60天。为此配制了4种饲粮,分别为基础饲粮(D-BD)、基础饲粮添加蛋氨酸(D-MET)、基础饲粮添加牛磺酸(D-TAU)和基础饲粮添加蛋氨酸和牛磺酸(D-MET + TAU)。本实验采用随机设计。选取体重(41.0±0.5 g)的144尾幼鱼,随机分为3个重复组,分别放在12个500 L的水族箱中,评估其生物学指标、胆固醇含量、肝脏基因表达及牛磺酸的合成和转运。统计分析显示,饲粮处理D-MET和D-TAU对生长速率有积极影响,而它们的相互作用导致生长速率显著提高(p
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引用次数: 0
Oxidative stress and physiological impacts of microplastic and elevated temperatures on Odontesthes argentinensis larvae. 氧化应激及微塑性和高温对阿根廷齿蛾幼虫的生理影响。
IF 2.5 3区 农林科学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2025-11-07 DOI: 10.1007/s10695-025-01604-w
Maidana Idiarte, Júlia Ferreiro, Gabriela Corrêa Soares, Larissa Müller, Juliane Ventura-Lima

Plastics are ubiquitous in the environment, widely used in diverse industrial applications, yet they pose escalating environmental challenges due to their persistence and bioaccumulative potential as microplastics (MP). Alongside this, the average global temperature increase represents an additional physiological stressor for many species. This study investigated the bioaccumulation and physiological impacts of polystyrene MP (spherical, 1.1 µm) on Odontesthes argentinensis larvae under two distinct temperatures (22 and 26 ºC). Larvae were exposed to MP concentrations of 40 and 400 µg/L for 96 h, with a control group maintained under identical conditions without MP exposure. Our findings revealed MP bioaccumulation in larval tissues, along with significant biochemical effects: reduced superoxide dismutase (SOD) activity, increased catalase (CAT) and glutathione S-transferase (GST) activities, particularly at higher temperatures, as well as elevated lipid peroxidation levels and reduced growth. These results underscore the susceptibility of O. argentinensis larvae to MP exposure and elevated temperatures, reflecting projected climate scenarios that may compromise the species' ecological success and cause socioeconomic harm to communities reliant on fishing.

塑料在环境中无处不在,广泛用于各种工业应用,但由于其作为微塑料(MP)的持久性和生物蓄积性,它们对环境构成了不断升级的挑战。除此之外,全球平均气温上升对许多物种来说是一个额外的生理压力源。本文研究了聚苯乙烯MP(球形,1.1µm)在22℃和26℃两种不同温度下对阿根廷齿蛾幼虫的生物积累和生理影响。幼虫分别暴露于浓度为40和400µg/L的MP环境96 h,对照组在相同条件下不暴露MP。我们的研究结果揭示了MP在幼虫组织中的生物积累,以及显著的生化效应:超氧化物歧化酶(SOD)活性降低,过氧化氢酶(CAT)和谷胱甘肽s -转移酶(GST)活性增加,特别是在高温下,以及脂质过氧化水平升高和生长减慢。这些结果强调了阿根廷赤鳉幼虫对MP暴露和温度升高的敏感性,反映了预测的气候情景可能会损害该物种的生态成功,并对依赖渔业的社区造成社会经济损害。
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引用次数: 0
Multi-omics analysis of the effects of fulvic acid on the growth performance of Larimichthys crocea in summer. 黄腐酸对夏颡鱼生长性能影响的多组学分析。
IF 2.5 3区 农林科学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2025-11-06 DOI: 10.1007/s10695-025-01599-4
Kai Xu, Chengzhang Huang, Huirong Lv, Weiye Li, Zhangjie Chu, Jungyeol Park, Joo Woo Hyung, Junwook Hur, Yang Gao, Xiaolong Yin

In response to the mounting pressures of climate change on aquaculture, this study investigates the potential of dietary fulvic acid (FA) supplementation to improve the resilience and growth performance of large yellow croaker (Larimichthys crocea) under conditions of high temperature stress. Conducted from July 14 to September 14, the experiment involved juvenile large yellow croakers acclimatized and then distributed into five treatment groups, with FA incorporated into their diets at concentrations of 0 g/kg, 2 g/kg, 4 g/kg, 8 g/kg, and 16 g/kg. Utilizing a multi-omics approach, we analyzed the impact of FA on the transcriptomic, metabolomic, and microbiomic profiles of the fish, focusing on the liver and gut tissues. The results demonstrated substantial improvements in weight gain and specific growth rates in the FA-supplemented groups, with the highest survival and growth metrics observed at the 0.8% FA concentration. Notably, FA supplementation induced significant enhancements in metabolic pathways critical for stress response, including fatty acid degradation and the PPAR signaling pathway, which are pivotal for managing lipid and glucose metabolism under thermal stress. Additionally, FA was found to beneficially alter the gut microbiota, increasing the abundance of Actinobacteriota, which is associated with reduced inflammation and enhanced intestinal health. The study highlights the efficacy of FA in bolstering the metabolic, physiological, and immunological resilience of large yellow croaker to adverse temperature conditions, thereby providing a viable, non-antibiotic strategy to enhance aquaculture productivity in the face of global warming.

为应对日益增加的气候变化对水产养殖的压力,本研究探讨了饲料中添加黄腐酸(FA)对大黄鱼(Larimichthys crocea)在高温胁迫下的恢复力和生长性能的影响。试验于7月14日至9月14日进行,将大黄鱼幼鱼驯化后,分为5个处理组,分别在饲料中添加0 g/kg、2 g/kg、4 g/kg、8 g/kg和16 g/kg的FA。利用多组学方法,我们分析了FA对鱼的转录组学、代谢组学和微生物组学的影响,重点是肝脏和肠道组织。结果显示,添加FA组的体重增加和特定生长率有显著改善,在0.8% FA浓度下观察到最高的生存和生长指标。值得注意的是,FA的补充显著增强了对应激反应至关重要的代谢途径,包括脂肪酸降解和PPAR信号通路,这是热应激下脂质和葡萄糖代谢的关键。此外,FA被发现有益于改变肠道微生物群,增加放线菌群的丰度,这与减少炎症和增强肠道健康有关。该研究强调了FA在增强大黄鱼对不利温度条件的代谢、生理和免疫恢复能力方面的功效,从而为面对全球变暖提高水产养殖生产力提供了一种可行的非抗生素策略。
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引用次数: 0
Effect of dietary additives based on essential oils of Lemongrass and Chamomile on the zootechnical performance and physiological stress response of European seabass (Dicentrarchus labrax) in aquaculture. 以柠檬草和洋甘菊精油为基础的饲料添加剂对养殖欧洲鲈鱼生产性能和生理应激反应的影响
IF 2.5 3区 农林科学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2025-11-04 DOI: 10.1007/s10695-025-01580-1
Soumaya Cheyadmi, Housni Chadli, Mohammed El Maadoudi, Said Sedki, Jamal Abrini, Aicha El Baaboua, Hassan Nhhala, Hicham Chairi

This preliminary study investigates the impact of dietary supplementation with 2 mL/kg of either lemongrass (Cymbopogon citratus) or chamomile (Matricaria chamomilla) essential oils on the welfare of European seabass. To simulate typical operational stress, the fish (520 days post-hatching; 156.48 ± 25.05g) were subjected to a 15-min acute stressor, mimicking offshore sampling for biometric measurements, on days 15 and 33 of the feeding trial. Our results showed that these additives did not cause any signs of disease, toxicity, or mortality. They revealed significant effects of these essential oils (p < 0.05), particularly the lemongrass-enriched diet, on fish appetite and daily feed intake, as well as on growth performance (weight gain per month, specific growth rate, and thermal growth coefficient) and feed utilization (condition factor, feed conversion ratio, and protein efficiency ratio). These parameters progressively improved over the duration of administration (p < 0.001). Positive effects were observed on organosomatic indices, with improvements in the hepatosomatic index and a reduction in the visceral fat index. Furthermore, these oil-enriched diets significantly improved total protein levels and hematocrit percentages (p < 0.001). This increase persisted over time (p < 0.01) and was not affected by stress induced by the sampling operation. Cortisol, lactate, and glucose levels fluctuated depending on the diets and duration of administration, but remained within normal ranges for healthy fish. There was also individual variability among fish within the same feeding group regarding these zootechnical and physiological responses. Finally, the bacterial load of Enterobacteriaceae, Enterococci, and total flora in the intestinal and skin mucus of seabass decreased after one month of feeding with essential-oil-based diets, particularly with chamomile. In conclusion, dietary inclusion of lemongrass and chamomile essential oils appears to offer promising anxiolytic and immunomodulatory benefits. However, further investigations are warranted to confirm their viability as a nutritional strategy to enhance the welfare and resilience of D. labrax in Mediterranean aquaculture.

本初步研究调查了在饲料中添加2 mL/kg柠檬草(Cymbopogon citratus)或洋甘菊(Matricaria chamomilla)精油对欧洲鲈鱼福利的影响。为了模拟典型的操作应激,在饲养试验的第15天和第33天,鱼(孵化后520天;156.48±25.05g)遭受15分钟的急性应激,模拟海上采样进行生物特征测量。我们的研究结果表明,这些添加剂没有引起任何疾病、毒性或死亡的迹象。他们揭示了这些精油的显著效果
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引用次数: 0
Dynamic transcriptome analysis during early development of black rockfish (Sebastes schlegelii). 黑岩鱼发育早期动态转录组分析。
IF 2.5 3区 农林科学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2025-11-03 DOI: 10.1007/s10695-025-01592-x
Zheng Zhang, Xishan Li, Tingting He, Yaming Zhang, Shuangqiao Yu, Hongyu Pu, Wei Wang, Xuejie Li

The black rockfish (Sebastes schlegelii), an important species in aquaculture, has experienced significant population declines due to habitat degradation and overfishing. Despite its rapid growth making it attractive for aquaculture, larval rearing remains challenging, as high-density culture conditions frequently lead to skeletal deformities and slowed growth. To elucidate the molecular mechanisms supporting this fast growth and developmental transitions, we profiled transcriptomic changes across three developmental stages (n = 3 per stage): larval (5 days post-hatching, dph), post-larval (21 dph), and juvenile (45 dph). RNA-Seq generated 56.77 Gb of clean data, resulting in 21,837 annotated unigenes. Differential expression analysis (|log2FC|≥ 1.2, FDR < 0.05) identified dynamic transcriptomic changes, with 3532 upregulated and 3383 downregulated genes in the 21 vs. 5 dph comparison, and 3789 upregulated and 4582 downregulated genes in the 45 vs. 21 dph comparison. GO enrichment revealed stage-specific pathways, including antigen processing in larvae and autophagy in post-larvae. KEGG pathway analysis underscored notable changes in metabolic processes, including long-term potentiation (21 vs. 5 dph) and proteasome-mediated protein degradation (45 vs. 21 dph). Hub genes, including haao, sec61a1, and vcp, were implicated in energy metabolism, protein synthesis, and cell cycle regulation, supporting rapid growth and tissue differentiation. This study provides fundamental transcriptomic data for exploring early development in S. schlegelii. The identified genes and pathways may facilitate further investigations into growth mechanisms and offer a molecular basis for improving larval survival and aquaculture performance.

黑岩鱼(sebases schlegelii)是一种重要的水产养殖物种,由于生境退化和过度捕捞,黑岩鱼的数量急剧下降。尽管其快速生长使其对水产养殖具有吸引力,但幼虫饲养仍然具有挑战性,因为高密度的养殖条件经常导致骨骼畸形和生长缓慢。为了阐明支持这种快速生长和发育转变的分子机制,我们分析了三个发育阶段(每个阶段n = 3)的转录组变化:幼虫期(孵化后5天,dph),幼虫期(21 dph)和幼年期(45 dph)。RNA-Seq产生了56.77 Gb的干净数据,得到了21,837个注释的unique。差异表达分析(|log2FC|≥1.2,FDR
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引用次数: 0
Dietary starch levels modulate growth performance, glucose utilization, and lipogenesis in mandarin fish (Siniperca chuatsi). 饲料淀粉水平可调节鳜鱼的生长性能、葡萄糖利用和脂肪生成。
IF 2.5 3区 农林科学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2025-10-30 DOI: 10.1007/s10695-025-01594-9
Zhihao Han, Shiwen Chen, Ye Gong, Shengchao Liu, Zeqiang Sun, Fan Gao, Naisong Chen, Xuxiong Huang, Haitao Zhang, Songlin Li

The study investigated how varying levels of dietary starch influence the growth, health status, and glucose-lipid metabolism of mandarin fish (initial body weight: 106 ± 1 g). Five diets containing graded levels of digestive starch were formulated (6.56%, 9.03%, 13.03%, 16.46%, and 19.57%), designated as D6.56, D9.03, D13.03, D16.46, and D19.57, respectively. Each diet was administered to triplicate groups of mandarin fish twice daily over 8 weeks. Results showed that growth performance increased linearly, peaking in the D13.03 group starch level before declining (P < 0.05). Liver and muscle lipid content and hepatic glycogen increased significantly in a quadratic and linear manner, respectively (P < 0.05). Transcriptional analysis revealed a starch-dependent upregulation of insulin signaling (ira, pi3kr1, and akt1) and glycolysis (gk, pfkl, and pk) genes, with concurrent downregulation of gluconeogenesis (fbp1 and g6pc) (P < 0.05). Protein expression analysis showed the ratio of p-PI3KR1 to PI3KR1 was significantly elevated as dietary starch increased, with the D13.03 group showing higher ratios than the D19.57 group (P < 0.05). FoxO1 expression was decreased in high-starch groups and reached a peak in the D13.03 group, while the phosphorylation of FoxO1 was significantly elevated (P < 0.05). Additionally, ChREBP and SREBP-1 protein levels were elevated in the D13.03 and D19.57 groups compared to the D6.56 groups (P < 0.05). In conclusion, mandarin fish showed superior carbohydrate tolerance with optimal growth at 13.03% dietary starch, which was partly due to the superior capacity to convert carbohydrates into triglycerides.

本研究研究了不同水平的膳食淀粉对鳜鱼(初始体重:106±1 g)生长、健康状况和糖脂代谢的影响。分别配制消化淀粉水平为6.56%、9.03%、13.03%、16.46%和19.57%的饲粮,分别命名为D6.56、D9.03、D13.03、D16.46和D19.57。每种饲料饲喂3组鳜鱼,每天2次,持续8周。结果表明:生长性能呈线性增长,在D13.03组淀粉水平达到峰值后逐渐下降(P
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引用次数: 0
Regeneration in fish, with special focus on killifishes. 鱼类的再生,特别是对鳉鱼的再生。
IF 2.5 3区 农林科学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2025-10-29 DOI: 10.1007/s10695-025-01600-0
Mina Motamedi, Behnaz Akbarpour

Killifish are notable for their remarkable regenerative capabilities, offering valuable insights into vertebrate tissue repair. This review synthesizes current knowledge on fish regeneration, focusing on the emerging model organism killifish Aphaniops hormuzensis (family Aphaniidae), a species capable of regenerating multiple structures-including the caudal fin, kidneys, central nervous system (telencephalon and spinal cord), and integumentary structures (scales). A comparative analysis with established models like zebrafish and medaka underscores the exceptional speed and efficiency of A. hormuzensis regeneration; it achieves complete spinal cord restoration within five days and brain tissue repair within seven days post-injury-significantly faster than zebrafish. The species employs blastema-mediated epimorphic regeneration, mirroring mechanisms in other teleosts but at an accelerated rate. Like many short-lived vertebrates, A. hormuzensis displays age-dependent declines in regenerative capacity, a trait explored in related killifishes. We explore the ecological and evolutionary implications of these traits, synthesizing how killifish models bridge comparative biology and regenerative medicine. The review critically evaluates the potential of killifishes, particularly A. hormuzensis, as powerful models for biomedical research, arguing that their unique regenerative kinetics and life history traits provide novel insights into neuroregeneration, organ repair, and the impact of aging on tissue repair. By highlighting these advances, this work underscores the importance of diversifying model organisms to fully understand the principles of tissue regeneration and their applications for human health.

鳉鱼以其非凡的再生能力而闻名,为脊椎动物组织修复提供了有价值的见解。本文综述了目前关于鱼类再生的研究进展,重点介绍了一种新兴的模式生物——鳉鱼(Aphaniops hormuzensis),它能够再生多种结构,包括尾鳍、肾脏、中枢神经系统(端脑和脊髓)和表皮结构(鳞片)。与斑马鱼和medaka等已建立模型的比较分析强调了A. hormuzensis再生的异常速度和效率;它在受伤后5天内完成脊髓修复,在7天内完成脑组织修复,比斑马鱼快得多。该物种采用囊胚介导的外胚再生机制,与其他硬骨鱼类似,但速度更快。像许多短命脊椎动物一样,a . hormuzensis在再生能力方面表现出年龄依赖性下降,这一特征在相关的鳉鱼中得到了研究。我们探讨了这些特征的生态和进化意义,综合了鳉鱼模型如何连接比较生物学和再生医学。这篇综述批判性地评估了鳉鱼的潜力,特别是A. hormuzensis,作为生物医学研究的强大模型,认为它们独特的再生动力学和生活史特征为神经再生、器官修复和衰老对组织修复的影响提供了新的见解。通过强调这些进展,这项工作强调了多样化模式生物的重要性,以充分了解组织再生的原理及其对人类健康的应用。
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Fish Physiology and Biochemistry
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