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Retraction: Structure based sequence analysis & epitope prediction of gp41 HIV1 envelope glycoprotein isolated in Pakistan. 撤回:巴基斯坦分离的gp41 hiv包膜糖蛋白的结构序列分析和表位预测。
Pub Date : 2012-10-23 DOI: 10.1186/1479-0556-10-10
Syyada Samra Jafri, Saliha Kiran, Syed Babar Jamal, Masaud Shah
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引用次数: 2
DNA vaccination for prostate cancer, from preclinical to clinical trials - where we stand? 前列腺癌DNA接种,从临床前到临床试验——我们的进展如何?
Pub Date : 2012-10-09 DOI: 10.1186/1479-0556-10-9
Sarfraz Ahmad, Paul Sweeney, Gerald C Sullivan, Mark Tangney

Development of various vaccines for prostate cancer (PCa) is becoming an active research area. PCa vaccines are perceived to have less toxicity compared with the available cytotoxic agents. While various immune-based strategies can elicit anti-tumour responses, DNA vaccines present increased efficacy, inducing both humoural and cellular immunity. This immune activation has been proven effective in animal models and initial clinical trials are encouraging. However, to validate the role of DNA vaccination in currently available PCa management paradigms, strong clinical evidence is still lacking. This article provides an overview of the basic principles of DNA vaccines and aims to provide a summary of preclinical and clinical trials outlining the benefits of this immunotherapy in the management of PCa.

各种前列腺癌疫苗的开发正成为一个活跃的研究领域。与现有的细胞毒制剂相比,PCa疫苗被认为毒性较小。虽然各种基于免疫的策略可以引发抗肿瘤反应,但DNA疫苗具有更高的功效,可诱导体液和细胞免疫。这种免疫激活在动物模型中被证明是有效的,初步临床试验令人鼓舞。然而,为了验证DNA疫苗在目前可用的前列腺癌管理范例中的作用,仍然缺乏强有力的临床证据。本文概述了DNA疫苗的基本原理,旨在提供临床前和临床试验的总结,概述了这种免疫疗法在PCa治疗中的益处。
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引用次数: 14
Evaluation of the immune responses induced by four targeted DNA vaccines encoding the juvenile liver fluke antigen, cathepsin B in a mouse model. 四种编码幼年肝吸虫抗原组织蛋白酶B的靶向DNA疫苗在小鼠模型中诱导的免疫应答的评价
Pub Date : 2012-08-31 DOI: 10.1186/1479-0556-10-7
Rama Jayaraj, David Piedrafita, Terry Spithill, Peter Smooker

Unlabelled:

Background: Liver fluke can infect cattle and sheep, and is also emerging as a human pathogen in developing countries. Cathepsin B (Cat B2) is a major cysteine protease secreted by the juvenile flukes. To enhance the immune responses of Cat B2, the cDNA sequence was fused with four different DNA vaccine vectors. The induced cellular and antibody responses were compared in vaccinated mice.

Methods: The following recombinant DNA vaccine constructs were constructed: empty vector VR1012 as negative control, cytoplasmic construct pVR1012 Cat B2, secretory construct pVR1020 Cat B2, chemokine-fused construct pMCP3 Cat B2 and lymph node targeting construct pCTLA-4 Cat B2. Plasmids were constructed using standard procedures, and positive constructs screened and selected using restriction digestion analysis followed by sequence analysis. The constructs were then tested in Cos-7 cells for in vitro expression, which was analysed using immunoblotting. Subsequently, female BALB/c mice were immunised with DNA constructs as vaccines. Elicited antibody responses were measured using ELISA. The ratio between IgG1 and IgG2a antibody responses was estimated among different vaccine groups. IgG antibody avidity assay was performed and the relative avidity index was calculated. The induced cytokine production from splenocytes of vaccinated animals was estimated using ELISPOT.

Results: DNA vaccine constructs carrying Cat B2 were expressed in Cos-7 cell lines and encoded protein was recognised using western blotting using rat anti- cathepsin B antibody. DNA vaccines elicited high Cat B2- specific IgG, IgG1, IgE and also modest IgG2a antibody responses. Cat B2 specific IL-4 T cell responses were also observed in Cat B2 vaccinated mice. The comparison of immunogenic potential in each of these constructs was demonstrated as enhanced antibody responses on the lymph-node targeting vector pCTLA-4 Cat B2, the high antibody avidity of chemo-attractant pMCP3 Cat B2 and stronger T cellular responses of non-secretory DNA vaccine pVR1012 Cat B2 in vaccinated animals.

Conclusion: This study showed that the targeting DNA vaccine strategies enhanced specific immune responses to juvenile fluke Cat B2. The results of our current study have demonstrated that a gene-based vaccine as an immunotherapeutic approach to combat Fasciola infection may be feasible.

背景:肝吸虫可感染牛和羊,并且在发展中国家也正在成为一种人类病原体。组织蛋白酶B (Cat B2)是吸虫幼鱼分泌的一种主要的半胱氨酸蛋白酶。为了增强Cat B2的免疫应答,将cDNA序列与4种不同的DNA疫苗载体融合。比较了免疫小鼠的诱导细胞反应和抗体反应。方法:构建空载体VR1012作为阴性对照、细胞质构建体pVR1012 Cat B2、分泌构建体pVR1020 Cat B2、趋化因子融合构建体pMCP3 Cat B2和淋巴结靶向构建体pCTLA-4 Cat B2。质粒按照标准程序构建,阳性构建体通过限制性酶切分析和序列分析筛选。然后在Cos-7细胞中测试构建体的体外表达,并使用免疫印迹法对其进行分析。随后,用DNA构建物作为疫苗免疫雌性BALB/c小鼠。ELISA法检测诱导抗体反应。估计不同疫苗组间IgG1和IgG2a抗体应答率。进行IgG抗体亲和度测定,计算相对亲和度指数。用ELISPOT测定接种动物脾细胞诱导细胞因子的产生。结果:在Cos-7细胞系中表达了携带Cat B2的DNA疫苗构建体,并利用大鼠抗组织蛋白酶B抗体进行western blotting识别编码蛋白。DNA疫苗引起高的Cat B2特异性IgG、IgG1、IgE和适度的IgG2a抗体反应。在接种Cat B2疫苗的小鼠中也观察到Cat B2特异性IL-4 T细胞反应。这两种结构的免疫原性比较表明,在接种疫苗的动物中,淋巴结靶向载体pCTLA-4 Cat B2的抗体反应增强,化学引诱剂pMCP3 Cat B2的抗体亲和力高,非分泌性DNA疫苗pVR1012 Cat B2的T细胞反应更强。结论:本研究表明靶向DNA疫苗策略增强了对幼年吸虫Cat B2的特异性免疫应答。我们目前的研究结果表明,基因疫苗作为对抗片形吸虫感染的免疫治疗方法可能是可行的。
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引用次数: 13
Targeting wild-type Erythrocyte receptors for Plasmodium falciparum and vivax Merozoites by Zinc Finger Nucleases In- silico: Towards a Genetic Vaccine against Malaria. 利用硅锌指核酸酶靶向恶性疟原虫和间日疟原虫野生型红细胞受体:研制抗疟疾基因疫苗。
Pub Date : 2012-08-31 DOI: 10.1186/1479-0556-10-8
Henry Kajumbula, Wilson Byarugaba, Misaki Wayengera

Unlabelled:

Background: Malaria causes immense human morbidity and mortality globally. The plasmodium species vivax and falciparum cause over 75 % clinical malaria cases. Until now, gene-based strategies against malaria have only been applied to plasmodium species and their mosquito-vector. Merozoites of these two respective plasmodium species target and invade red blood cells (RBCs) by using the duffy antigen receptor for chemokines (DARC), and Sialic Acid (SLC4A1) residues of the O-linked glycans of Glycophorin A. RBCs of naturally selected duffy-negative blacks are resistant to P.vivax tropism. We hypothesized that artificial aberration of the host-pathway by target mutagenesis of either RBC -receptors, may abolish or reduce susceptibility of the host to malaria. As a first step towards the experimental actualization of these concepts, we aimed to identify zinc finger arrays (ZFAs) for constructing ZFNs that target genes of either wild-type host-RBC- receptors.

Methods: In-Silico Gene & Genome Informatics

Results: Using the genomic contextual nucleotide-sequences of homo-sapiens darc and glycophorin-a, and the ZFN-consortia software- CoDA-ZiFiT-ZFA and CoDA-ZiFiT-ZFN: we identified 163 and over 1,000 single zinc finger arrays (sZFAs) that bind sequences within the genes for the two respective RBC-receptors. Second, 2 and 18 paired zinc finger arrays (pZFAs) that are precursors for zinc finger nucleases (ZFNs) capable of cleaving the genes for darc and glycophorin-a were respectively assembled. Third, a mega-BLAST evaluation of the genome-wide cleavage specificity of this set of ZFNs was done, revealing alternate homologous nucleotide targets in the human genome other than darc or glycophorin A.

Conclusions: ZFNs engineered with these ZFA-precursors--with further optimization to enhance their specificity to only darc and glycophorin-a, could be used in constructing an experimental gene-based-malaria vaccine. Alternatively, meganucleases and transcription activator-like (TAL) nucleases that target conserved stretches of darc and glycophorin-a DNA may serve the purpose of abrogating invasion of RBCs by falciparam and vivax plasmodia species.

背景:疟疾在全球造成巨大的人类发病率和死亡率。间日疟原虫和恶性疟原虫引起75%以上的临床疟疾病例。到目前为止,基于基因的疟疾防治策略只应用于疟原虫及其蚊媒。这两种疟原虫的分殖子通过duffy抗原趋化因子受体(DARC)和糖蛋白a o -链聚糖的唾液酸残基(SLC4A1)靶向并侵入红细胞(rbc)。自然选择的duffy阴性黑色疟原虫的红细胞对间日疟原虫的嗜性具有抗性。我们假设,通过对红细胞受体进行靶诱变,使宿主途径发生人为畸变,可能会消除或降低宿主对疟疾的易感性。作为实验实现这些概念的第一步,我们旨在鉴定锌指阵列(ZFAs),以构建针对野生型宿主-红细胞受体基因的ZFNs。结果:利用同源智人darc和glycophorin-a的基因组上下文核苷酸序列,以及zfn联盟软件- CoDA-ZiFiT-ZFA和CoDA-ZiFiT-ZFN,我们鉴定出163个和1000多个单锌指阵列(sZFAs),它们结合了两种红细胞受体基因内的序列。其次,分别组装了2个和18个配对锌指阵列(pZFAs),它们是锌指核酸酶(ZFNs)的前体,能够切割darc和糖蛋白-a基因。第三,对这组ZFNs的全基因组切割特异性进行了meta - blast评估,揭示了人类基因组中除了darc或糖蛋白a之外的其他同源核苷酸靶点。结论:用这些zfa -前体工程的ZFNs -进一步优化以增强其仅对darc和糖蛋白a的特异性,可以用于构建实验基因型疟疾疫苗。另外,靶向darc和糖蛋白a DNA保守片段的巨核酶和转录激活因子样核酸酶(TAL)可能有助于消除恶性疟原虫和间日疟原虫对红细胞的侵袭。
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引用次数: 2
A brief review on dengue molecular virology, diagnosis, treatment and prevalence in Pakistan. 巴基斯坦登革热分子病毒学、诊断、治疗和流行情况综述。
Pub Date : 2012-08-28 DOI: 10.1186/1479-0556-10-6
Sobia Idrees, Usman A Ashfaq

Dengue virus infection is a serious health problem infecting 2.5 billion people worldwide. Dengue is now endemic in more than 100 countries, including Pakistan. Each year hundreds of people get infected with dengue in Pakistan. Currently, there is no vaccine available for the prevention of Dengue virus infection due to four viral serotypes. Dengue infection can cause death of patients in its most severity, meanwhile many antiviral compounds are being tested against dengue virus infection to eradicate this disease but still there is a need to develop an efficient, low-cost and safe vaccine that can target all the four serotypes of dengue virus. This review summarizes dengue molecular virology, important drug targets, prevalence in Pakistan, diagnosis, treatment and medicinal plant inhibitors against dengue.

登革热病毒感染是一个严重的健康问题,全世界有25亿人感染。登革热目前在包括巴基斯坦在内的100多个国家流行。巴基斯坦每年有数百人感染登革热。目前,由于四种病毒血清型,尚无预防登革热病毒感染的疫苗。登革热感染在最严重的情况下可导致患者死亡,与此同时,许多抗病毒化合物正在针对登革热病毒感染进行测试,以根除这种疾病,但仍然需要开发一种有效、低成本和安全的疫苗,可以针对登革热病毒的所有四种血清型。本文综述了登革热的分子病毒学、重要的药物靶点、巴基斯坦的流行情况、登革热的诊断、治疗和药用植物抑制剂。
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引用次数: 80
A combination of intradermal jet-injection and electroporation overcomes in vivo dose restriction of DNA vaccines. 皮内注射和电穿孔的结合克服了DNA疫苗的体内剂量限制。
Pub Date : 2012-08-08 DOI: 10.1186/1479-0556-10-5
David Hallengärd, Andreas Bråve, Maria Isaguliants, Pontus Blomberg, Jenny Enger, Richard Stout, Alan King, Britta Wahren

Unlabelled:

Background: The use of optimized delivery devices has been shown to enhance the potency of DNA vaccines. However, further optimization of DNA vaccine delivery is needed for this vaccine modality to ultimately be efficacious in humans.

Methods: Herein we evaluated antigen expression and immunogenicity after intradermal delivery of different doses of DNA vaccines by needle or by the Biojector jet-injection device, with or without the addition of electroporation (EP).

Results: Neither needle injection augmented by EP nor Biojector alone could induce higher magnitudes of immune responses after immunizations with a high dose of DNA. After division of a defined DNA dose into multiple skin sites, the humoral response was particularly enhanced by Biojector while cellular responses were particularly enhanced by EP. Furthermore, a close correlation between in vivo antigen expression and cell-mediated as well as humoral immune responses was observed.

Conclusions: These results show that two optimized DNA vaccine delivery devices can act together to overcome dose restrictions of plasmid DNA vaccines.

背景:使用优化的递送装置已被证明可提高DNA疫苗的效力。然而,要使这种疫苗方式最终在人类中有效,还需要进一步优化DNA疫苗的递送。方法:在皮内注射不同剂量的DNA疫苗(有或没有添加电穿孔(EP))后,通过针或Biojector喷射注射装置进行抗原表达和免疫原性评价。结果:高剂量DNA免疫后,无论是EP增强针头注射还是单独使用生物注射剂均不能诱导更高程度的免疫应答。在将一定剂量的DNA分成多个皮肤部位后,Biojector特别增强了体液反应,而EP特别增强了细胞反应。此外,体内抗原表达与细胞介导的免疫反应和体液免疫反应密切相关。结论:两种优化后的DNA疫苗递送装置可以协同作用,克服质粒DNA疫苗的剂量限制。
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引用次数: 29
Structure based sequence analysis & epitope prediction of gp41 HIV1 envelope glycoprotein isolated in Pakistan. 巴基斯坦hiv - 1包膜糖蛋白gp41结构序列分析及表位预测。
Pub Date : 2012-06-20 DOI: 10.1186/1479-0556-10-4
Syyada Samra Jafri, Saliha Kiran, Syed Babar Jamal, Masaud Shah

Unlabelled:

Background: Gp41 is an envelope glycoprotein of human immune deficiency virus (HIV). HIV viral glycoprotein gp41, present in complex with gp120, assists the viral entry into host cell. Over eighty thousands individuals are HIV infected in Pakistan which makes about 0.2% of 38.6 million infected patients worldwide. Hence, HIV gp41 protein sequences isolated in Pakistan were analyzed for the CD4 and CD8 T cells binding epitopes.

Results: Immunoinformatics tools were applied for the study of variant region of HIV gp41envelope protein. The protein nature was analyzed using freely accessible computational software. About 90 gp41 sequences of Pakistani origin were aligned and variable and conserved regions were found. Four segments were found to be conserved in gp41 viral protein. A method was developed, involving the secondary structure, surface accessibility, hydrophobicity, antigenicity and molecular docking for the prediction and location of epitopes in the viral glycoprotein. Some highly conserved CD4 and CD8 binding epitopes were also found using multiple parameters. The predicted continuous epitopes mostly fall in the conserved region of 1-12; 14-22 and 25-46 and can be used as effective vaccine candidates.

Conclusions: The study revealed potential HIV subtype a derived cytotoxic T cell (CTL) epitopes from viral proteome of Pakistani origin. The conserved epitopes are very useful for the diagnosis of the HIV 1 subtype a. This study will also help scientists to promote research for vaccine development against HIV 1 subtype a, isolated in Pakistan.

背景:Gp41是人类免疫缺陷病毒(HIV)的包膜糖蛋白。HIV病毒糖蛋白gp41与gp120复合存在,有助于病毒进入宿主细胞。巴基斯坦有8万多人感染了艾滋病毒,占全球3860万感染者的0.2%。因此,分析在巴基斯坦分离的HIV gp41蛋白序列的CD4和CD8 T细胞结合表位。结果:应用免疫信息学工具对艾滋病病毒gp41包膜蛋白变异区进行了研究。使用可自由访问的计算软件分析蛋白质的性质。对大约90个巴基斯坦来源的gp41序列进行了比对,发现了可变和保守区。发现gp41病毒蛋白中有四个片段是保守的。开发了一种预测和定位病毒糖蛋白表位的方法,包括二级结构、表面可及性、疏水性、抗原性和分子对接。使用多种参数还发现了一些高度保守的CD4和CD8结合表位。预测的连续表位大多落在1-12的保守区;14-22和25-46,并且可以用作有效的候选疫苗。结论:该研究从巴基斯坦来源的病毒蛋白质组中揭示了潜在的HIV亚型衍生的细胞毒性T细胞(CTL)表位。保守的表位对HIV 1亚型a的诊断非常有用。这项研究还将帮助科学家促进针对在巴基斯坦分离的HIV 1亚类型a的疫苗开发研究。
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引用次数: 2
An acidic oligopeptide displayed on AAV2 improves axial muscle tropism after systemic delivery. AAV2上显示的酸性寡肽可改善全身输送后的轴向肌偏向性。
Pub Date : 2012-06-18 DOI: 10.1186/1479-0556-10-3
Ni-Chung Lee, Darin J Falk, Barry J Byrne, Thomas J Conlon, Nathalie Clement, Stacy Porvasnik, Marda L Jorgensen, Mark Potter, Kirsten E Erger, Rachael Watson, Steven C Ghivizzani, Hung-Chuan Chiu, Yin-Hsiu Chien, Wuh-Liang Hwu

Background: The appropriate tropism of adeno-associated virus (AAV) vectors that are systemically injected is crucial for successful gene therapy when local injection is not practical. Acidic oligopeptides have been shown to enhance drug delivery to bones.

Methods: In this study six-L aspartic acids (D6) were inserted into the AAV2 capsid protein sequence between amino acid residues 587 and 588. 129SVE mice were injected with double-stranded wild-type- (WT-) or D6-AAV2 mCherry expression vectors (3.24 x 1010 vg per animal) via the superficial temporal vein within 24 hours of birth.

Results: Fluorescence microscopy and quantitative polymerase chain reaction confirmed higher levels of mCherry expression in the paraspinal and gluteus muscles in the D6-AAV2 injected mice. The results revealed that although D6-AAV2 was less efficient in the transduction of immortalized cells stronger mCherry signals were detected over the spine and pelvis by live imaging in the D6-AAV2-injected mice than were detected in the WT-AAV2-injected mice. In addition, D6-AAV2 lost the liver tropism observed for WT-AAV2.

Conclusions: An acidic oligopeptide displayed on AAV2 improves axial muscle tropism and decreases liver tropism after systemic delivery. This modification should be useful in creating AAV vectors that are suitable for gene therapy for diseases involving the proximal muscles.

背景:当局部注射不可行时,系统注射腺相关病毒(AAV)载体的适当倾向对于成功的基因治疗至关重要。酸性寡肽已被证明能增强药物向骨骼的输送。方法:在AAV2衣壳蛋白587 ~ 588氨基酸残基之间插入6 l天冬氨酸(D6)。129SVE小鼠在出生24小时内通过颞浅静脉注射双链野生型(WT-)或D6-AAV2 mCherry表达载体(每只3.24 × 1010 vg)。结果:荧光显微镜和定量聚合酶链反应证实,注射D6-AAV2的小鼠棘旁肌和臀肌中mCherry的表达水平较高。结果显示,尽管D6-AAV2对永生化细胞的转导效率较低,但通过活体成像,D6-AAV2注射小鼠的脊柱和骨盆上检测到的mCherry信号比wt - aav2注射小鼠强。此外,D6-AAV2也失去了WT-AAV2的肝向性。结论:在AAV2上显示的酸性寡肽改善了全身输送后轴向肌的趋向性,降低了肝脏的趋向性。这种修饰应该有助于创建适合于近端肌肉疾病基因治疗的AAV载体。
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引用次数: 5
Treatment of adult MPSI mouse brains with IDUA-expressing mesenchymal stem cells decreases GAG deposition and improves exploratory behavior. 用表达idua的间充质干细胞治疗成年MPSI小鼠脑可减少GAG沉积并改善探索行为。
Pub Date : 2012-04-20 DOI: 10.1186/1479-0556-10-2
Flávia Helena da Silva, Vanessa Gonçalves Pereira, Eduardo G Yasumura, Lígia Zacchi Tenório, Leonardo Pinto de Carvalho, Bianca Cristina Garcia Lisboa, Priscila Keiko Matsumoto, Roberta Sessa Stilhano, Vivian Y Samoto, Bruno Frederico Aguilar Calegare, Letícia de Campos Brandão, Vânia D'Almeida, Thaís Rm Filippo, Marimélia Porcionatto, Leny Toma, Helena Bonciani Nader, Valderez Bastos Valero, Melissa Camassola, Nance Beyer Nardi, Sang Won Han

Background: Mucopolysaccharidosis type I (MPSI) is caused by a deficiency in alpha-L iduronidase (IDUA), which leads to lysosomal accumulation of the glycosaminoglycans (GAGs) dermatan and heparan sulfate. While the currently available therapies have good systemic effects, they only minimally affect the neurodegenerative process. Based on the neuroprotective and tissue regenerative properties of mesenchymal stem cells (MSCs), we hypothesized that the administration of MSCs transduced with a murine leukemia virus (MLV) vector expressing IDUA to IDUA KO mouse brains could reduce GAG deposition in the brain and, as a result, improve neurofunctionality, as measured by exploratory activity.

Methods: MSCs infected with an MLV vector encoding IDUA were injected into the left ventricle of the brain of 12- or 25-month-old IDUA KO mice. The behavior of the treated mice in the elevated plus maze and open field tests was observed for 1 to 2 months. Following these observations, the brains were removed for biochemical and histological analyses.

Results: After 1 or 2 months of observation, the presence of the transgene in the brain tissue of almost all of the treated mice was confirmed using PCR, and a significant reduction in GAG deposition was observed. This reduction was directly reflected in an improvement in exploratory activity in the open field and the elevated plus maze tests. Despite these behavioral improvements and the reduction in GAG deposition, IDUA activity was undetectable in these samples. Overall, these results indicate that while the initial level of IDUA was not sustainable for a month, it was enough to reduce and maintain low GAG deposition and improve the exploratory activity for months.

Conclusions: These data show that gene therapy, via the direct injection of IDUA-expressing MSCs into the brain, is an effective way to treat neurodegeneration in MPSI mice.

背景:I型粘多糖病(MPSI)是由α - l糖醛酸酶(IDUA)缺乏引起的,它导致溶酶体积聚糖胺聚糖(GAGs)皮肤聚糖和硫酸肝素。虽然目前可用的治疗方法具有良好的全身效果,但它们对神经退行性过程的影响很小。基于间充质干细胞(MSCs)的神经保护和组织再生特性,我们假设用表达IDUA的小鼠白血病病毒(MLV)载体转导的MSCs进入IDUA KO小鼠大脑可以减少大脑中的GAG沉积,从而改善神经功能。方法:将编码IDUA的MLV载体感染的MSCs注射到12或25月龄的IDUA KO小鼠的左心室。观察实验组小鼠在高架+迷宫和开阔场地试验中的行为,为期1 ~ 2个月。在这些观察之后,大脑被移除进行生化和组织学分析。结果:经过1 ~ 2个月的观察,几乎所有处理小鼠的脑组织中都有转基因基因的存在,并且观察到GAG沉积明显减少。这种减少直接反映在开阔场地的探索活动的改善和高强度的迷宫测试中。尽管这些行为改善和GAG沉积减少,但在这些样本中未检测到IDUA活性。总的来说,这些结果表明,虽然初始水平的IDUA不能持续一个月,但它足以减少和维持低GAG沉积,并在几个月内提高勘探活动。结论:通过向脑内直接注射表达idua的MSCs进行基因治疗是治疗MPSI小鼠神经退行性变的有效方法。
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引用次数: 8
Molecular relationship between field and vaccine strain of measles virus and its persistence in Pakistan. 麻疹病毒田间株和疫苗株之间的分子关系及其在巴基斯坦的持续存在。
Pub Date : 2012-01-30 DOI: 10.1186/1479-0556-10-1
Masaud Shah, Sulaiman Shams, Ziaur Rahman

Background: Countrywide 5.9 million, 0-11 Month old children are immunized annually by EPI (Expended Program on Immunization) against 8 vaccine preventable diseases including measles and so on. Unfortunately the basic immunity centers are not uniform throughout the country. Each center provides services to about 27000 people which is inadequate. The purpose of this study was to explore the development of EPI Pakistan in terms of immunization of measles.

Methods: Nucleotide sequences were analyzed by neighbor joining method (bootstrap test) using Bio- edit and MEGA-5 software to find evolutionary relationship between wild type measles strain and vaccine strain (Edmonston strain) used in Pakistan. For statistical analysis of data SPSS 16 was used.

Results: Currently 1.3 vaccinators are working at each U C (union council) which according to national EPI policy should be at least 2. About 56% and 44% children of age 0-11 months did not received second dose of measles in the last two years respectively. Out of these 4231 cases which were reported last year, 1370 have received their first dose of measles vaccine.

Conclusion: Seroconversion and seroprevalence study of the vaccine and field strain of measles virus is needed to confirm whether its failure is due to service unavailability or vaccine in-affectivity.

背景:全国每年有 590 万 0-11 个月大的儿童通过 EPI(免疫接种支出计划)接种疫苗,预防包括麻疹等在内的 8 种疫苗可预防的疾病。遗憾的是,全国各地的基础免疫中心并不统一。每个中心为大约 27 000 人提供服务,这是远远不够的。本研究旨在探讨巴基斯坦 EPI 在麻疹免疫方面的发展情况:方法:使用 Bio- edit 和 MEGA-5 软件,通过邻接法(bootstrap test)对核苷酸序列进行分析,以发现巴基斯坦使用的野生型麻疹菌株和疫苗菌株(埃德蒙顿菌株)之间的进化关系。数据统计分析使用 SPSS 16:目前,每个 U C(联合委员会)有 1.3 名疫苗接种员,而根据国家 EPI 政策,至少应有 2 名疫苗接种员。在去年报告的 4231 例病例中,有 1370 例已接种了第一剂麻疹疫苗:结论:需要对疫苗和麻疹病毒的野外毒株进行血清转换和血清流行率研究,以确认疫苗失效的原因是服务不到位还是疫苗无效。
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引用次数: 0
期刊
Genetic Vaccines and Therapy
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