Sepsis-induced acute lung injury (S-ALI) represents a life-threatening condition with complex molecular pathophysiology and limited therapeutic options. Emerging evidence highlights the critical role of competing endogenous RNA (ceRNA) networks, particularly long non-coding RNA (lncRNA)-microRNA (miRNA)-mRNA axes, in orchestrating cell type-specific responses during S-ALI. This review synthesizes recent advances illustrating how these regulatory circuits modulate alveolar epithelial apoptosis, endothelial permeability, macrophage polarization, and neutrophil infiltration, thereby driving inflammation, barrier dysfunction, and immune dysregulation. Furthermore, we explore the promising therapeutic potential of engineered extracellular vesicles for targeted delivery of ceRNA components-such as miRNA mimics or lncRNA inhibitors-to precisely manipulate these networks. Despite progress, significant challenges remain, including model translatability, functional redundancy, and delivery efficiency. Overcoming these hurdles may unlock novel strategies for treating S-ALI, moving toward personalized and context-specific interventions.
{"title":"Decoding the lncRNA-miRNA-mRNA network in sepsis-induced lung injury: from pathogenesis to extracellular vesicle-based therapy.","authors":"Yating Wei, Weiye Gong, Yuhua Wei, Xiaohong Jiang, Chaoqian Li, Rongzong Ye","doi":"10.3389/fimmu.2026.1701440","DOIUrl":"10.3389/fimmu.2026.1701440","url":null,"abstract":"<p><p>Sepsis-induced acute lung injury (S-ALI) represents a life-threatening condition with complex molecular pathophysiology and limited therapeutic options. Emerging evidence highlights the critical role of competing endogenous RNA (ceRNA) networks, particularly long non-coding RNA (lncRNA)-microRNA (miRNA)-mRNA axes, in orchestrating cell type-specific responses during S-ALI. This review synthesizes recent advances illustrating how these regulatory circuits modulate alveolar epithelial apoptosis, endothelial permeability, macrophage polarization, and neutrophil infiltration, thereby driving inflammation, barrier dysfunction, and immune dysregulation. Furthermore, we explore the promising therapeutic potential of engineered extracellular vesicles for targeted delivery of ceRNA components-such as miRNA mimics or lncRNA inhibitors-to precisely manipulate these networks. Despite progress, significant challenges remain, including model translatability, functional redundancy, and delivery efficiency. Overcoming these hurdles may unlock novel strategies for treating S-ALI, moving toward personalized and context-specific interventions.</p>","PeriodicalId":12622,"journal":{"name":"Frontiers in Immunology","volume":"17 ","pages":"1701440"},"PeriodicalIF":5.9,"publicationDate":"2026-01-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12890660/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146179097","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2026-01-28eCollection Date: 2025-01-01DOI: 10.3389/fimmu.2025.1739637
Kamille M Rasche, David Tieri, Samantha M Morrissey, Hong Li, Fan Zhang, William S Gibson, Easton E Ford, Uddalok Jana, Melissa L Smith, Jun Yan, Corey T Watson
Introduction: Non-small cell lung cancer is the leading cause of cancer-related mortality worldwide, with lung adenocarcinoma (LUAD) as the most common subtype. Although early-stage disease is often treated surgically, advanced LUAD typically requires chemotherapy, radiation, and/or immunotherapy, largely focused on T cell-mediated responses. Therapeutic efficacy, however, is also shaped by tumor-infiltrating (TI) B cells, whose roles in LUAD remain incompletely understood.
Methods: We performed cytometry by time of flight (CyTOF) using 44 markers on matched tumor, adjacent lung, and peripheral blood samples from 48 LUAD patients to define TI immune landscapes. 66 immune cell subsets were identified, and patients were stratified into four groups based on TI cell composition. Adaptive immune receptor repertoire sequencing (AIRR-seq) of IgM and IgG was conducted on matched samples from 29 patients to assess clonal expansion and affinity maturation. Subisotype-resolved AIRR-seq was additionally performed on tumor samples from 18 patients.
Results: CyTOF analysis revealed four patient groups with distinct TI immune profiles. AIRR-seq demonstrated increased clonal expansion and affinity maturation in tumors compared to adjacent lung and blood. Tumor-specific IGHV enrichment patterns were observed but were not associated with patient group assignment. Instead, clonal expansion was greatest in tumors with higher lymphocyte proportions. Subisotype-resolved analysis showed enrichment of IGHG2 and IGHG3 in tumors from patients with low TI B cell abundance, whereas IGHG4 was enriched in patients with high TI B cell infiltration and correlated with four CyTOF-defined immune subsets.
Discussion: These findings reveal substantial inter-individual variation in TI immune landscapes and highlight distinct B cell repertoire and subisotype features within LUAD tumors. Together, these data suggest that B cell composition and antibody subisotype usage may contribute to immune contexture and could inform the development of more tailored immunotherapeutic strategies in LUAD.
{"title":"B cell phenotypes and antibody signatures associate with interpatient variation in the lung adenocarcinoma tumor microenvironment.","authors":"Kamille M Rasche, David Tieri, Samantha M Morrissey, Hong Li, Fan Zhang, William S Gibson, Easton E Ford, Uddalok Jana, Melissa L Smith, Jun Yan, Corey T Watson","doi":"10.3389/fimmu.2025.1739637","DOIUrl":"10.3389/fimmu.2025.1739637","url":null,"abstract":"<p><strong>Introduction: </strong>Non-small cell lung cancer is the leading cause of cancer-related mortality worldwide, with lung adenocarcinoma (LUAD) as the most common subtype. Although early-stage disease is often treated surgically, advanced LUAD typically requires chemotherapy, radiation, and/or immunotherapy, largely focused on T cell-mediated responses. Therapeutic efficacy, however, is also shaped by tumor-infiltrating (TI) B cells, whose roles in LUAD remain incompletely understood.</p><p><strong>Methods: </strong>We performed cytometry by time of flight (CyTOF) using 44 markers on matched tumor, adjacent lung, and peripheral blood samples from 48 LUAD patients to define TI immune landscapes. 66 immune cell subsets were identified, and patients were stratified into four groups based on TI cell composition. Adaptive immune receptor repertoire sequencing (AIRR-seq) of IgM and IgG was conducted on matched samples from 29 patients to assess clonal expansion and affinity maturation. Subisotype-resolved AIRR-seq was additionally performed on tumor samples from 18 patients.</p><p><strong>Results: </strong>CyTOF analysis revealed four patient groups with distinct TI immune profiles. AIRR-seq demonstrated increased clonal expansion and affinity maturation in tumors compared to adjacent lung and blood. Tumor-specific IGHV enrichment patterns were observed but were not associated with patient group assignment. Instead, clonal expansion was greatest in tumors with higher lymphocyte proportions. Subisotype-resolved analysis showed enrichment of IGHG2 and IGHG3 in tumors from patients with low TI B cell abundance, whereas IGHG4 was enriched in patients with high TI B cell infiltration and correlated with four CyTOF-defined immune subsets.</p><p><strong>Discussion: </strong>These findings reveal substantial inter-individual variation in TI immune landscapes and highlight distinct B cell repertoire and subisotype features within LUAD tumors. Together, these data suggest that B cell composition and antibody subisotype usage may contribute to immune contexture and could inform the development of more tailored immunotherapeutic strategies in LUAD.</p>","PeriodicalId":12622,"journal":{"name":"Frontiers in Immunology","volume":"16 ","pages":"1739637"},"PeriodicalIF":5.9,"publicationDate":"2026-01-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12891238/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146179027","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2026-01-28eCollection Date: 2026-01-01DOI: 10.3389/fimmu.2026.1724061
Yizhou Huang, Maohui Chen, Zhenyuan Yang, Yongcong Zhang, Chuanquan Lin, Shuliang Zhang, Taidui Zeng, Jun Yu, Chun Chen, Bin Zheng
Background: Esophageal squamous cell carcinoma (ESCC) carries a high risk of recurrence after neoadjuvant immunochemotherapy and surgery. Both host inflammatory-nutritional status and circulating tumor markers may jointly influence clinical outcomes. We evaluated the prognostic value of the Advanced Lung Cancer Inflammation Index (ALI) and a composite Tumor Load Index (TL) to refine risk stratification in this setting.
Methods: We retrospectively analyzed 460 consecutive ESCC patients who received 2-3 cycles of PD-1 inhibitor plus platinum/taxane-based chemotherapy followed by esophagectomy. ALI was calculated as BMI × albumin/NLR. TL was derived via LASSO Cox regression from pre-treatment SCC-Ag, CEA, and CA19-9. Optimal cutoffs were identified using maximally selected rank statistics (ALI: 31.22; TL: 0.224). Patients were categorized as low-risk (high ALI/low TL), intermediate-risk (high ALI/high TL or low ALI/low TL), and high-risk (low ALI/high TL). Endpoints included overall survival (OS), disease-free survival (DFS), pathologic complete response (pCR), and major pathologic response (MPR).
Results: With a median follow-up of 42 months, 3-year OS rates were 84.7%, 66.0%, and 34.6% for the low-, intermediate-, and high-risk groups, respectively (log-rank P < 0.001). Corresponding 3-year DFS rates were 75.4%, 61.6%, and 29.0%. In multivariable Cox models, intermediate- and high-risk groups had progressively worse OS (adjusted HR = 2.11 and 3.43) and DFS (adjusted HR = 1.64 and 2.62) compared with the low-risk reference (all P < 0.01). High-risk status independently predicted lower odds of achieving MPR (adjusted OR = 0.34, P = 0.002) and pCR (OR = 0.07, P = 0.011). A prognostic nomogram integrating risk group, ASA score, MPR, and ypN status showed strong discrimination (C-index = 0.742) and favorable calibration for 2-, 3-, and 4-year OS, with time-dependent AUCs of 0.759, 0.789, and 0.712.
Conclusions: Pre-treatment ALI and TL jointly provide robust and complementary prognostic information in ESCC patients receiving neoadjuvant immunochemotherapy. Low ALI combined with high TL identifies a biologically aggressive subset with poor pathologic response and inferior survival. Integration of ALI and TL may facilitate risk-adapted perioperative strategies and personalized treatment optimization.
背景:食管鳞状细胞癌(ESCC)在新辅助免疫化疗和手术后具有很高的复发风险。宿主炎症营养状况和循环肿瘤标志物可能共同影响临床结果。我们评估了晚期肺癌炎症指数(ALI)和复合肿瘤负荷指数(TL)的预后价值,以完善这种情况下的风险分层。方法:我们回顾性分析了460例连续接受2-3周期PD-1抑制剂加铂/紫杉烷化疗后食管切除术的ESCC患者。ALI计算为BMI ×白蛋白/NLR。TL通过LASSO Cox回归从预处理后的SCC-Ag、CEA和CA19-9得到。使用最大选择秩统计量确定最佳截止点(ALI: 31.22; TL: 0.224)。患者分为低危(高ALI/低TL)、中危(高ALI/高TL或低ALI/低TL)和高危(低ALI/高TL)。终点包括总生存期(OS)、无病生存期(DFS)、病理完全缓解期(pCR)和主要病理缓解期(MPR)。结果:中位随访42个月,低、中、高风险组3年OS率分别为84.7%、66.0%和34.6% (log-rank P < 0.001)。相应的3年DFS率分别为75.4%、61.6%和29.0%。在多变量Cox模型中,中高危组的OS(调整后的HR = 2.11和3.43)和DFS(调整后的HR = 1.64和2.62)均较低危组恶化(P均< 0.01)。高危状态独立预测实现MPR(校正OR = 0.34, P = 0.002)和pCR (OR = 0.07, P = 0.011)的几率较低。综合风险组、ASA评分、MPR和ypN状态的预后nomogram显示出很强的判别性(C-index = 0.742), 2年、3年和4年OS的校正效果良好,auc随时间变化分别为0.759、0.789和0.712。结论:治疗前ALI和TL联合为接受新辅助免疫化疗的ESCC患者提供了可靠的、互补的预后信息。低ALI合并高TL是一种生物侵袭性亚群,病理反应差,生存率低。整合ALI和TL可以促进风险适应围手术期策略和个性化治疗优化。
{"title":"Prognostic impact of advanced lung cancer inflammation index and tumor load index in esophageal squamous cell carcinoma after neoadjuvant immunochemotherapy.","authors":"Yizhou Huang, Maohui Chen, Zhenyuan Yang, Yongcong Zhang, Chuanquan Lin, Shuliang Zhang, Taidui Zeng, Jun Yu, Chun Chen, Bin Zheng","doi":"10.3389/fimmu.2026.1724061","DOIUrl":"10.3389/fimmu.2026.1724061","url":null,"abstract":"<p><strong>Background: </strong>Esophageal squamous cell carcinoma (ESCC) carries a high risk of recurrence after neoadjuvant immunochemotherapy and surgery. Both host inflammatory-nutritional status and circulating tumor markers may jointly influence clinical outcomes. We evaluated the prognostic value of the Advanced Lung Cancer Inflammation Index (ALI) and a composite Tumor Load Index (TL) to refine risk stratification in this setting.</p><p><strong>Methods: </strong>We retrospectively analyzed 460 consecutive ESCC patients who received 2-3 cycles of PD-1 inhibitor plus platinum/taxane-based chemotherapy followed by esophagectomy. ALI was calculated as BMI × albumin/NLR. TL was derived via LASSO Cox regression from pre-treatment SCC-Ag, CEA, and CA19-9. Optimal cutoffs were identified using maximally selected rank statistics (ALI: 31.22; TL: 0.224). Patients were categorized as low-risk (high ALI/low TL), intermediate-risk (high ALI/high TL or low ALI/low TL), and high-risk (low ALI/high TL). Endpoints included overall survival (OS), disease-free survival (DFS), pathologic complete response (pCR), and major pathologic response (MPR).</p><p><strong>Results: </strong>With a median follow-up of 42 months, 3-year OS rates were 84.7%, 66.0%, and 34.6% for the low-, intermediate-, and high-risk groups, respectively (log-rank P < 0.001). Corresponding 3-year DFS rates were 75.4%, 61.6%, and 29.0%. In multivariable Cox models, intermediate- and high-risk groups had progressively worse OS (adjusted HR = 2.11 and 3.43) and DFS (adjusted HR = 1.64 and 2.62) compared with the low-risk reference (all P < 0.01). High-risk status independently predicted lower odds of achieving MPR (adjusted OR = 0.34, P = 0.002) and pCR (OR = 0.07, P = 0.011). A prognostic nomogram integrating risk group, ASA score, MPR, and ypN status showed strong discrimination (C-index = 0.742) and favorable calibration for 2-, 3-, and 4-year OS, with time-dependent AUCs of 0.759, 0.789, and 0.712.</p><p><strong>Conclusions: </strong>Pre-treatment ALI and TL jointly provide robust and complementary prognostic information in ESCC patients receiving neoadjuvant immunochemotherapy. Low ALI combined with high TL identifies a biologically aggressive subset with poor pathologic response and inferior survival. Integration of ALI and TL may facilitate risk-adapted perioperative strategies and personalized treatment optimization.</p>","PeriodicalId":12622,"journal":{"name":"Frontiers in Immunology","volume":"17 ","pages":"1724061"},"PeriodicalIF":5.9,"publicationDate":"2026-01-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12891139/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146179033","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2026-01-28eCollection Date: 2026-01-01DOI: 10.3389/fimmu.2026.1710823
Anhong Li, Kaile Zhao, Tianjiao Wang, Guangyue Shi
Background: Bladder cancer (BLCA) is a prevalent genitourinary malignancy characterized by high recurrence and mortality rates. While mannose metabolism has demonstrated anti-tumor potential across various cancers, its role in BLCA remains underexplored. This study examines the influence of mannose metabolism on BLCA prognosis.
Methods: BLCA-related datasets and genes associated with mannose metabolism (MMRGs) were obtained from public databases. Candidate genes were identified by overlapping differentially expressed genes with MMRGs. Prognostic genes were pinpointed using ten machine learning algorithms and regression analysis to develop a risk model, which was subsequently validated. A nomogram was constructed by integrating the risk score with clinical features, and its predictive accuracy was assessed. We performed functional enrichment, drug sensitivity, reverse transcription-quantitative polymerase chain reaction (RT-qPCR), Western blotting, immunohistochemistry, and immune infiltration analyses. Key cellular components were identified, and further analyses, including pathway enrichment, pseudo-temporal analysis, and cell communication, were performed.
Results: CALR, SLMAP, PFKFB4, and TMTC1 were identified as prognostic genes in BLCA. Notably, the expression of SLMAP and TMTC1 was significantly downregulated in BLCA, whereas PFKFB4 and CALR were upregulated. These findings were consistently validated by RT-qPCR, Western blotting, and immunohistochemical analyses (p < 0.05). The risk model stratified patients into a high-risk group (HRG) and a low-risk group (LRG), with HRG patients exhibiting significantly poorer survival outcomes. The risk score was identified as an independent prognostic factor, and the nomogram demonstrated high diagnostic accuracy. Notable differences between HRG and LRG patients were observed in the "Ribosome" pathway. Additionally, 86 chemotherapeutic drugs exhibited significant differential responses between HRG and LRG, with 23 immune cell types showing differential abundances, including activated dendritic cells (p < 0.05). Single-cell analysis revealed macrophages as key cells in BLCA, which were classified into five subtypes, with CALR, SLMAP, and PFKFB4 influencing their expression.
Conclusion: Four mannose metabolism-related prognostic genes were identified in BLCA, and macrophages were confirmed as critical cells. These findings provide valuable insights for improving prognostic assessment in BLCA.
{"title":"Transcriptome and single-cell RNA sequencing analysis with 101 machine learning combinations and experimental verification reveals the mechanism of action of mannose metabolism in bladder cancer.","authors":"Anhong Li, Kaile Zhao, Tianjiao Wang, Guangyue Shi","doi":"10.3389/fimmu.2026.1710823","DOIUrl":"10.3389/fimmu.2026.1710823","url":null,"abstract":"<p><strong>Background: </strong>Bladder cancer (BLCA) is a prevalent genitourinary malignancy characterized by high recurrence and mortality rates. While mannose metabolism has demonstrated anti-tumor potential across various cancers, its role in BLCA remains underexplored. This study examines the influence of mannose metabolism on BLCA prognosis.</p><p><strong>Methods: </strong>BLCA-related datasets and genes associated with mannose metabolism (MMRGs) were obtained from public databases. Candidate genes were identified by overlapping differentially expressed genes with MMRGs. Prognostic genes were pinpointed using ten machine learning algorithms and regression analysis to develop a risk model, which was subsequently validated. A nomogram was constructed by integrating the risk score with clinical features, and its predictive accuracy was assessed. We performed functional enrichment, drug sensitivity, reverse transcription-quantitative polymerase chain reaction (RT-qPCR), Western blotting, immunohistochemistry, and immune infiltration analyses. Key cellular components were identified, and further analyses, including pathway enrichment, pseudo-temporal analysis, and cell communication, were performed.</p><p><strong>Results: </strong>CALR, SLMAP, PFKFB4, and TMTC1 were identified as prognostic genes in BLCA. Notably, the expression of SLMAP and TMTC1 was significantly downregulated in BLCA, whereas PFKFB4 and CALR were upregulated. These findings were consistently validated by RT-qPCR, Western blotting, and immunohistochemical analyses (p < 0.05). The risk model stratified patients into a high-risk group (HRG) and a low-risk group (LRG), with HRG patients exhibiting significantly poorer survival outcomes. The risk score was identified as an independent prognostic factor, and the nomogram demonstrated high diagnostic accuracy. Notable differences between HRG and LRG patients were observed in the \"Ribosome\" pathway. Additionally, 86 chemotherapeutic drugs exhibited significant differential responses between HRG and LRG, with 23 immune cell types showing differential abundances, including activated dendritic cells (p < 0.05). Single-cell analysis revealed macrophages as key cells in BLCA, which were classified into five subtypes, with CALR, SLMAP, and PFKFB4 influencing their expression.</p><p><strong>Conclusion: </strong>Four mannose metabolism-related prognostic genes were identified in BLCA, and macrophages were confirmed as critical cells. These findings provide valuable insights for improving prognostic assessment in BLCA.</p>","PeriodicalId":12622,"journal":{"name":"Frontiers in Immunology","volume":"17 ","pages":"1710823"},"PeriodicalIF":5.9,"publicationDate":"2026-01-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12891155/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146179054","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2026-01-28eCollection Date: 2026-01-01DOI: 10.3389/fimmu.2026.1711723
Abigail E Elias, Joanne L Pennock, Andrew J McBain, Emma-Jayne Keevill, Catherine A O'Neill
Staphylococcus aureus second immunoglobulin-binding protein (Sbi) is a unique type 2-promoting virulence factor that induces IL-33 and thymic stromal lymphopoietin (TSLP) release. This mechanism is essential for the development of S. aureus-induced eczema in the widely used NC/Tnd mouse model of human atopic dermatitis (AD). Microbiome shifts in AD suggest that microbiota could modulate the disease. We therefore sought to identify skin bacteria that attenuate S. aureus-induced IL-33/TSLP release from keratinocytes. Micrococcus luteus was unique among skin isolates in its ability to negate cytokine induction. The bioactive factor responsible was identified using fractionation, LC-MS and recombinant proteins, as the serine protease "PA domain protein" (PADP). Immunoblotting and ELISA confirmed Sbi and IL-33 degradation by PADP. This was not observed with the M. luteus type strain which contains a frame shift mutation within the PADP active site. These data provide new insights into the role of skin microbiota in AD and highlights their potential as topical therapeutics.
{"title":"A skin isolate of <i>Micrococcus luteus</i> negates the <i>Staphylococcus aureus-</i>induced release of type 2 cytokines from keratinocytes.","authors":"Abigail E Elias, Joanne L Pennock, Andrew J McBain, Emma-Jayne Keevill, Catherine A O'Neill","doi":"10.3389/fimmu.2026.1711723","DOIUrl":"10.3389/fimmu.2026.1711723","url":null,"abstract":"<p><p><i>Staphylococcus aureus</i> second immunoglobulin-binding protein (Sbi) is a unique type 2-promoting virulence factor that induces IL-33 and thymic stromal lymphopoietin (TSLP) release. This mechanism is essential for the development of <i>S. aureus</i>-induced eczema in the widely used NC/Tnd mouse model of human atopic dermatitis (AD). Microbiome shifts in AD suggest that microbiota could modulate the disease. We therefore sought to identify skin bacteria that attenuate <i>S. aureus-</i>induced IL-33/TSLP release from keratinocytes. <i>Micrococcus luteus</i> was unique among skin isolates in its ability to negate cytokine induction. The bioactive factor responsible was identified using fractionation, LC-MS and recombinant proteins, as the serine protease \"PA domain protein\" (PADP). Immunoblotting and ELISA confirmed Sbi and IL-33 degradation by PADP. This was not observed with the <i>M. luteus</i> type strain which contains a frame shift mutation within the PADP active site. These data provide new insights into the role of skin microbiota in AD and highlights their potential as topical therapeutics.</p>","PeriodicalId":12622,"journal":{"name":"Frontiers in Immunology","volume":"17 ","pages":"1711723"},"PeriodicalIF":5.9,"publicationDate":"2026-01-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12891184/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146179058","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2026-01-28eCollection Date: 2025-01-01DOI: 10.3389/fimmu.2025.1710869
Isabela Ferreira Soares, Cinthia Magalhães Rodolphi, Ana Luiza Carneiro Alencar, Ada da Silva Matos, Rodrigo Nunes Rodrigues-da-Silva, Barbara de Oliveira Baptista, Rodrigo Medeiros Martorano, Hugo Amorim Dos Santos de Souza, Evelyn Kety Pratt Riccio, Jenifer Peixoto de Barros, Paulo Renato Rivas Totino, Cláudio Tadeu Daniel-Ribeiro, Lilian Rose Pratt-Riccio, Josué da Costa Lima-Junior
Introduction: Malaria caused by P. vivax continues to be a serious public health problem, especially in countries like Brazil where P. vivax accounts for more than 80% of diagnosed cases. Since this plasmodial species is characterized as one of the most difficult to eliminate, the development of a specific vaccine for P. vivax may be an essential tool for effective control of the disease. The protein Ripr has been described in P. falciparum as an essential part of the erythrocyte invasion complex. Given the limited number of P. vivax vaccine antigens currently under investigation, this study aimed to characterize, the naturally acquired humoral immune response to Ripr protein of P. vivax.
Methods: ELISA assays were performed using plasma samples from individuals naturally exposed to malaria in the Brazilian Amazon in order to determine levels of IgM, IgG and IgG subclasses against PvRipr. In addition, linear B-cell epitopes within the protein were identified.
Results and discussion: Our results demonstrated that PvRipr is naturally immunogenic, as more than 60% of the individuals presented IgM or IgG antibodies against recombinant PvRipr. The profile of IgG subclasses was also investigated and higher frequencies of seropositive individuals for IgG1 and IgG2 were observed. After in silico prediction, a total of four linear B cell epitopes were identified in PvRipr, from these sequences, B-PvRipr(879-888) and B-PvRipr(923-958) had higher frequencies of seropositive individuals and reactivity indexes in comparison to the other tested epitopes. Moreover, levels of IgG antibodies specific for these two epitopes were strongly correlated with the levels of IgG antibodies against recombinant PvRipr and especially with IgG3 antibodies, a cytophilic subclass widely cited in the protective immune response against malaria.
{"title":"B-cell epitope mapping and characterization of antibody responses to recombinant PvRipr in malaria-exposed individuals.","authors":"Isabela Ferreira Soares, Cinthia Magalhães Rodolphi, Ana Luiza Carneiro Alencar, Ada da Silva Matos, Rodrigo Nunes Rodrigues-da-Silva, Barbara de Oliveira Baptista, Rodrigo Medeiros Martorano, Hugo Amorim Dos Santos de Souza, Evelyn Kety Pratt Riccio, Jenifer Peixoto de Barros, Paulo Renato Rivas Totino, Cláudio Tadeu Daniel-Ribeiro, Lilian Rose Pratt-Riccio, Josué da Costa Lima-Junior","doi":"10.3389/fimmu.2025.1710869","DOIUrl":"10.3389/fimmu.2025.1710869","url":null,"abstract":"<p><strong>Introduction: </strong>Malaria caused by <i>P. vivax</i> continues to be a serious public health problem, especially in countries like Brazil where <i>P. vivax</i> accounts for more than 80% of diagnosed cases. Since this plasmodial species is characterized as one of the most difficult to eliminate, the development of a specific vaccine for <i>P. vivax</i> may be an essential tool for effective control of the disease. The protein Ripr has been described in <i>P. falciparum</i> as an essential part of the erythrocyte invasion complex. Given the limited number of <i>P. vivax</i> vaccine antigens currently under investigation, this study aimed to characterize, the naturally acquired humoral immune response to Ripr protein of <i>P. vivax</i>.</p><p><strong>Methods: </strong>ELISA assays were performed using plasma samples from individuals naturally exposed to malaria in the Brazilian Amazon in order to determine levels of IgM, IgG and IgG subclasses against PvRipr. In addition, linear B-cell epitopes within the protein were identified.</p><p><strong>Results and discussion: </strong>Our results demonstrated that PvRipr is naturally immunogenic, as more than 60% of the individuals presented IgM or IgG antibodies against recombinant PvRipr. The profile of IgG subclasses was also investigated and higher frequencies of seropositive individuals for IgG1 and IgG2 were observed. After <i>in silico</i> prediction, a total of four linear B cell epitopes were identified in PvRipr, from these sequences, B-PvRipr<sub>(879-888)</sub> and B-PvRipr<sub>(923-958)</sub> had higher frequencies of seropositive individuals and reactivity indexes in comparison to the other tested epitopes. Moreover, levels of IgG antibodies specific for these two epitopes were strongly correlated with the levels of IgG antibodies against recombinant PvRipr and especially with IgG3 antibodies, a cytophilic subclass widely cited in the protective immune response against malaria.</p>","PeriodicalId":12622,"journal":{"name":"Frontiers in Immunology","volume":"16 ","pages":"1710869"},"PeriodicalIF":5.9,"publicationDate":"2026-01-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12891138/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146179069","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2026-01-28eCollection Date: 2026-01-01DOI: 10.3389/fimmu.2026.1723156
Lingling Zhou, Lin Sun, Xuhang Huang, Junxian Chen, Taijun Huang, Yulong Xu, Xiaorong Luo, Caibiao Wei, Fengfei Liu, Xiaolan Pan, Madanni Dong, Jingyu Su, Weilong Yang, Min Fang
Background: Hepatocellular carcinoma (HCC) patients with Clonorchis sinensis (Cs) infection tend to exhibit a poorer prognosis compared to those without infection. Nevertheless, the molecular mechanisms underlying Cs-associated HCC, particularly those linked to metastatic progression, remain poorly understood. This study therefore seeks to elucidate the role of C. sinensis infection in promoting metastasis.
Methods: Through a clinical retrospective analysis, we compared overall survival and metastasis incidence between HCC patients with and without Cs infection. To explore the underlying mechanisms, we conducted integrated multi-omics analyses-including RNA-seq, miRNA-seq, ATAC-seq, WGBS-seq, oxWGBS-seq, and ChIP-seq-to profile 369 metastasis-related genes in Cs+ and Cs- HCC tumors. The expression of three key metastasis-related genes was further validated by RT-qPCR, and Transwell and wound-healing assays were performed in vitro to confirm the pro-metastatic effect of Cs infection on HCC cells.
Results: In HCC patients, Cs infection was associated with poorer overall survival and an increased metastasis rate. We identified 20 metastasis-related genes, with SPP1, MMP2, and VCAM1 as central hubs, together with 41 interacting miRNAs and 71 accessible promoter regions. Histone modifications-particularly H3K9ac, H3K27ac and H3K4me3-were correlated with chromatin accessibility in the promoters of these genes. Molecular experiments further demonstrated that Cs infection enhances the metastatic potential of HCC.
Conclusions: Our study reveals that Cs infection promotes HCC metastasis through gene and epigenetic alterations, providing mechanistic insights and identifying potential targets for early intervention.
{"title":"The metastasis landscape of <i>Clonorchis sinensis</i>-associated hepatocellular carcinoma: an integrated multi-omics and clinical study.","authors":"Lingling Zhou, Lin Sun, Xuhang Huang, Junxian Chen, Taijun Huang, Yulong Xu, Xiaorong Luo, Caibiao Wei, Fengfei Liu, Xiaolan Pan, Madanni Dong, Jingyu Su, Weilong Yang, Min Fang","doi":"10.3389/fimmu.2026.1723156","DOIUrl":"10.3389/fimmu.2026.1723156","url":null,"abstract":"<p><strong>Background: </strong>Hepatocellular carcinoma (HCC) patients with <i>Clonorchis sinensis</i> (<i>Cs</i>) infection tend to exhibit a poorer prognosis compared to those without infection. Nevertheless, the molecular mechanisms underlying <i>Cs</i>-associated HCC, particularly those linked to metastatic progression, remain poorly understood. This study therefore seeks to elucidate the role of <i>C. sinensis</i> infection in promoting metastasis.</p><p><strong>Methods: </strong>Through a clinical retrospective analysis, we compared overall survival and metastasis incidence between HCC patients with and without <i>Cs</i> infection. To explore the underlying mechanisms, we conducted integrated multi-omics analyses-including RNA-seq, miRNA-seq, ATAC-seq, WGBS-seq, oxWGBS-seq, and ChIP-seq-to profile 369 metastasis-related genes in <i>Cs</i> <sup>+</sup> and <i>Cs</i> <sup>-</sup> HCC tumors. The expression of three key metastasis-related genes was further validated by RT-qPCR, and Transwell and wound-healing assays were performed <i>in vitro</i> to confirm the pro-metastatic effect of <i>Cs</i> infection on HCC cells.</p><p><strong>Results: </strong>In HCC patients, <i>Cs</i> infection was associated with poorer overall survival and an increased metastasis rate. We identified 20 metastasis-related genes, with <i>SPP1</i>, <i>MMP2</i>, and <i>VCAM1</i> as central hubs, together with 41 interacting miRNAs and 71 accessible promoter regions. Histone modifications-particularly H3K9ac, H3K27ac and H3K4me3-were correlated with chromatin accessibility in the promoters of these genes. Molecular experiments further demonstrated that <i>Cs</i> infection enhances the metastatic potential of HCC.</p><p><strong>Conclusions: </strong>Our study reveals that <i>Cs</i> infection promotes HCC metastasis through gene and epigenetic alterations, providing mechanistic insights and identifying potential targets for early intervention.</p>","PeriodicalId":12622,"journal":{"name":"Frontiers in Immunology","volume":"17 ","pages":"1723156"},"PeriodicalIF":5.9,"publicationDate":"2026-01-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12891100/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146179110","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2026-01-28eCollection Date: 2026-01-01DOI: 10.3389/fimmu.2026.1725312
Cai Ye, Yijie Liu, Yue Li, Zan Li, Liyuan Sui, Jiwen Cui, Zihao Jiang, Jinlian Li, Jianjun Song, Jiguang Liu
Background: Atopic dermatitis (AD) is a chronic, pruritic, inflammatory skin disorder. While the stem of Schisandra chinensis has been extensively studied for its pharmacological properties, including anti-inflammatory, antioxidant, and hepatoprotective effects, its therapeutic potential in AD remains to be elucidated. This study therefore aimed to investigate the effects of Schisandra chinensis stem extract (SCSE) against AD and to explore its underlying mechanism of action.
Methods: Chemical profiling of SCSE via UPLC-Q-Exactive-Orbitrap-MS revealed 45 constituents, with lignans comprising 80%. The primary active component was identified through activity-guided assays employing hyaluronidase inhibition and HPLC. The therapeutic efficacy of SCSE and its constituent Schisandrin B (Sch B) was assessed in an AD mouse model. Furthermore, network pharmacology predicted the involved signaling pathways, and these predictions were subsequently validated experimentally.
Results: Sch B was identified as the core active component. Both SCSE and Sch B significantly improved skin barrier function in AD mice, as evidenced by reduced transepidermal water loss (TEWL) and upregulation of key barrier proteins (Filaggrin, Loricrin, and Claudin-1). They also alleviated pruritus by suppressing Transient Receptor Potential Vanilloid 1 (TRPV1) and mitigated the allergic-inflammatory response, as shown by reduced Immunoglobulin E (IgE) levels and inhibited release of mast cell (MC) mediators (IL-4, IL-6, TNF-α). These effects were potentially mediated through modulation of the NF-κB pathway.
Conclusion: By simultaneously mitigating skin barrier dysfunction, immune inflammation, and pruritus, SCSE and Sch B hold promise as therapeutic candidates capable of disrupting the self-perpetuating cycle of AD. These findings position SCSE and Sch B as a novel therapeutic strategy for this disease.
{"title":"The stem of <i>Schisandra chinensis</i> and Schisandrin B alleviated DNCB-induced atopic dermatitis in mice by inhibiting the NF-κB pathway.","authors":"Cai Ye, Yijie Liu, Yue Li, Zan Li, Liyuan Sui, Jiwen Cui, Zihao Jiang, Jinlian Li, Jianjun Song, Jiguang Liu","doi":"10.3389/fimmu.2026.1725312","DOIUrl":"10.3389/fimmu.2026.1725312","url":null,"abstract":"<p><strong>Background: </strong>Atopic dermatitis (AD) is a chronic, pruritic, inflammatory skin disorder. While the stem of Schisandra chinensis has been extensively studied for its pharmacological properties, including anti-inflammatory, antioxidant, and hepatoprotective effects, its therapeutic potential in AD remains to be elucidated. This study therefore aimed to investigate the effects of <i>Schisandra chinensis</i> stem extract (SCSE) against AD and to explore its underlying mechanism of action.</p><p><strong>Methods: </strong>Chemical profiling of SCSE via UPLC-Q-Exactive-Orbitrap-MS revealed 45 constituents, with lignans comprising 80%. The primary active component was identified through activity-guided assays employing hyaluronidase inhibition and HPLC. The therapeutic efficacy of SCSE and its constituent Schisandrin B (Sch B) was assessed in an AD mouse model. Furthermore, network pharmacology predicted the involved signaling pathways, and these predictions were subsequently validated experimentally.</p><p><strong>Results: </strong>Sch B was identified as the core active component. Both SCSE and Sch B significantly improved skin barrier function in AD mice, as evidenced by reduced transepidermal water loss (TEWL) and upregulation of key barrier proteins (Filaggrin, Loricrin, and Claudin-1). They also alleviated pruritus by suppressing Transient Receptor Potential Vanilloid 1 (TRPV1) and mitigated the allergic-inflammatory response, as shown by reduced Immunoglobulin E (IgE) levels and inhibited release of mast cell (MC) mediators (IL-4, IL-6, TNF-α). These effects were potentially mediated through modulation of the NF-κB pathway.</p><p><strong>Conclusion: </strong>By simultaneously mitigating skin barrier dysfunction, immune inflammation, and pruritus, SCSE and Sch B hold promise as therapeutic candidates capable of disrupting the self-perpetuating cycle of AD. These findings position SCSE and Sch B as a novel therapeutic strategy for this disease.</p>","PeriodicalId":12622,"journal":{"name":"Frontiers in Immunology","volume":"17 ","pages":"1725312"},"PeriodicalIF":5.9,"publicationDate":"2026-01-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12890654/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146179119","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}