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2018 IEEE International Work Conference on Bioinspired Intelligence (IWOBI)最新文献

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Image Processing Based Classification of Enzymatic Browning in Chopped Apples 基于图像处理的切碎苹果酶促褐变分类
Pub Date : 2018-07-01 DOI: 10.1109/IWOBI.2018.8464181
Monika Arora, M. Dutta, C. Travieso-González, Radim Burget
Apples are one of the most common fruit on the planet. It is rich in iron, fiber, antioxidants and other nutritive quality; which are incredibly important for human body and brain. The quality of an apple gets affected once they are chopped. This paper presents a non-destructive image processing based algorithm that identifies the presence of enzymatic browning in chopped apples for the determination of its nutrients loss. The proposed imperative assemblage of this image processing algorithm makes it flexible, automatic and non-destructive. The quantification of enzymatic browning in chopped apples has been obtained with high precision using this proposed imaging based method. The machine learning based on strategic selection of discriminatory statistical features of chopped apples extracted in wavelet domain makes it a novel approach. 85% of accuracy has been achieved by using machine learning based Support Vector Machine (SVM) classifier.
苹果是地球上最常见的水果之一。它富含铁、纤维、抗氧化剂等营养品质;这对人体和大脑非常重要。苹果一旦被切碎,其品质就会受到影响。本文提出了一种基于非破坏性图像处理的算法,该算法可识别切碎苹果中酶促褐变的存在,以确定其营养损失。该算法的命令式组合使其具有灵活性、自动化和非破坏性。利用这种基于成像的方法,对切碎的苹果进行了高精度的酶促褐变定量分析。基于策略选择的机器学习方法在小波域提取苹果的鉴别统计特征,使其成为一种新颖的方法。使用基于机器学习的支持向量机(SVM)分类器,准确率达到85%。
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引用次数: 3
Camera Localization in Outdoor Garden Environments Using Artificial Landmarks 室外花园环境中使用人工地标的摄像机定位
Pub Date : 2018-07-01 DOI: 10.1109/IWOBI.2018.8464139
N. Strisciuglio, María Leyva-Vallina, N. Petkov, R. Muñoz-Salinas
In this paper, we present an outdoor monocular camera localization system based on artificial markers and test its performance in one of the test gardens of the TrimBot2020 project, in Wageningen. We use ArUco markers to construct a map of the environment and to subsequently localize the camera position within it. We combine the localization algorithm based on ArUco with a Kalman filter to smooth the trajectory and improve the localization stability with respect to fast movements of the camera, and blurred or noisy images. We recorded two sequences, with resolution 480p and l080p respectively, in the TrimBot2020 garden. We compare the localization performance of ArUco with a keypoint-based approach, namely ORB-SLAM2. We analyze and discuss the strengths and problems of both marker- and keypoint-based approaches on the considered sequences. The performed comparison suggests that the two approaches might be fused to jointly improve re-localization and reduce the drift in pose estimation.
在本文中,我们提出了一种基于人工标记的室外单目相机定位系统,并在瓦赫宁根TrimBot2020项目的一个测试花园中测试了其性能。我们使用ArUco标记来构建环境地图,并随后定位相机在其中的位置。我们将基于ArUco的定位算法与卡尔曼滤波相结合,以平滑轨迹,提高相机快速运动和模糊或噪声图像的定位稳定性。我们在TrimBot2020花园中记录了两个序列,分辨率分别为480p和1080p。我们将ArUco的定位性能与基于关键点的方法ORB-SLAM2进行了比较。我们分析和讨论了基于标记和关键点的方法在考虑的序列上的优势和问题。比较表明,两种方法可以融合在一起,以提高姿态估计的再定位和减少漂移。
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引用次数: 2
Analysis of Content-Aware Image Compression with VGG16 基于VGG16的内容感知图像压缩分析
Pub Date : 2018-07-01 DOI: 10.1109/IWOBI.2018.8464188
Alen Selimović, Blaž Meden, P. Peer, A. Hladnik
Content-aware compression based on the use of saliency maps aims to improve the interpretability of an image by encoding the more relevant image regions with a higher quality than the rest of the image. This paper revisits two convolutional neural network (CNN) models based on VGG16, multi-structure region of interest (MS-ROI) and class activation map (CAM), which enable the localization of salient image regions. While the MS-ROI model allows for the localization of multiple salient image regions, the CAM model, on the other hand, tends to localize only the most relevant class. We use the contextual information provided by the obtained saliency maps to guide the compression. By encoding more important image regions at a higher bitrate and less important ones at a lower bitrate, different qualities of compression for the regions of interest and the background are obtained, while also achieving smooth transitions from salient to non-salient regions. The performance of both models is evaluated on images from the MIT Saliency Benchmark dataset and the General-100 dataset, and the results of the compression are compared to the standard JPEG compression at different quality factors. Experimental results show that for the files of approximately same size, the compression methods based on the two CNN models outperform the standard JPEG compression. When comparing the compression based on the MS-ROI model to the compression based on the CAM model, the former is characterized by a higher PSNR and a better visual quality of the obtained images.
基于显著性映射的内容感知压缩旨在通过编码比图像其他部分质量更高的相关图像区域来提高图像的可解释性。本文重新研究了基于VGG16的两种卷积神经网络(CNN)模型,即多结构感兴趣区域(MS-ROI)和类激活图(CAM),这两种模型实现了显著图像区域的定位。MS-ROI模型允许对多个显著图像区域进行定位,而CAM模型则倾向于只定位最相关的类别。我们使用所获得的显著性映射提供的上下文信息来指导压缩。通过以较高的比特率编码较重要的图像区域,以较低的比特率编码较不重要的图像区域,对感兴趣的区域和背景进行不同质量的压缩,同时也实现了从显著区域到非显著区域的平滑过渡。在来自MIT Saliency Benchmark数据集和General-100数据集的图像上评估了这两种模型的性能,并将压缩结果与不同质量因素下的标准JPEG压缩结果进行了比较。实验结果表明,对于大小大致相同的文件,基于两种CNN模型的压缩方法优于标准JPEG压缩方法。将基于MS-ROI模型的压缩与基于CAM模型的压缩进行比较,前者具有更高的PSNR和更好的图像视觉质量。
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引用次数: 12
Comparison of Bio-Inspired Algorithms From The Point of View of Medical Image Segmentation 从医学图像分割的角度比较仿生算法
Pub Date : 2018-07-01 DOI: 10.1109/IWOBI.2018.8464218
G. Wachs-Lopes, Fernanda S. Beltrame, R. M. Santos, P. Rodrigues
As new technological challenges depending on the computational performance of bio-inspired algorithms emerge, the demand for more efficient heuristic solutions grows up at same rate. Specifically, the medical field is one of the most challenging, due to the fact of the pre-processing steps, such as multilevel segmentation of color spaces, require greater precision. Thus, many algorithms inspired by natural behavior have emerged successfully aiming to find approximate solutions compatible with optimal ones, but with much higher performance in terms of computational time. Although they perform well, some of these newer algorithms have not yet been analyzed from their practical applicability in one or more medical databases. This paper presents a comparative study from a practical point of view of three of these new algorithms: Cuckoo Search (CS), KH (Krill Herd) and EHO (Elephant Herd Optimization). Our results suggest that these three algorithms are compatible in terms of performance in medical databases, but with EHO showing the best performance among all three.
随着依赖于生物启发算法计算性能的新技术挑战的出现,对更有效的启发式解决方案的需求也以同样的速度增长。具体来说,医疗领域是最具挑战性的领域之一,因为预处理步骤,如色彩空间的多级分割,需要更高的精度。因此,许多受自然行为启发的算法已经成功地出现,旨在找到与最优解兼容的近似解,但在计算时间方面具有更高的性能。虽然它们表现良好,但其中一些较新的算法尚未从它们在一个或多个医学数据库中的实际适用性进行分析。本文从实践的角度对布谷鸟搜索算法(CS)、磷虾群算法(KH)和象群优化算法(EHO)进行了比较研究。我们的研究结果表明,这三种算法在医学数据库中的性能是兼容的,但EHO在三者中表现最好。
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引用次数: 2
Detection of ERV-Derived Transcripts in Human Testis Using High Throughput Sequencing: Pipeline for Annotation and Genomic Localization 利用高通量测序检测人类睾丸中erv衍生转录本:用于注释和基因组定位的管道
Pub Date : 2018-07-01 DOI: 10.1109/IWOBI.2018.8464183
Rebeca Campos-Sánchez, I. Sandoval-Carvajal
The human genome is crowded with transposable elements (TE), of which endogenous retroviruses (ERVs) are not the most studied from the perspective of expression, polymorphisms, and their influence on recent genome evolution. We studied expression data (RNA-Seq) from two human testis providing evidence that diverse families of ERVs are expressing in these tissues and that some ERV-derived transcripts overlap with genes or lncRNA annotations. Our pipeline can be applied to other human and primate samples to extend our knowledge of ERV's biology and their importance for germline genome evolution and disease.
人类基因组中充斥着转座因子(TE),其中内源性逆转录病毒(erv)在表达、多态性及其对近期基因组进化的影响方面的研究并不多。我们研究了来自两个人类睾丸的表达数据(RNA-Seq),提供了证据表明不同的erv家族在这些组织中表达,并且一些erv衍生的转录物与基因或lncRNA注释重叠。我们的管道可以应用于其他人类和灵长类动物样本,以扩展我们对ERV生物学及其对种系基因组进化和疾病的重要性的认识。
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引用次数: 1
An Object Manipulation System Architecture for Humanoid Robots Based on Primate Cognition 基于灵长类动物认知的类人机器人对象操作系统架构
Pub Date : 2018-07-01 DOI: 10.1109/IWOBI.2018.8464221
Daniel García-Vaglio, Federico Ruiz-Ugalde
Currently one of the most important challenges is to bring robots out of factory floors to work alongside humans. Because these environments are characterized by a very large variety of objects, a key factor is to provide them with better adaptive object manipulation skills. This means that robots are required to connect, in a meaningful way, a high level task to the robot body movements. Understanding the objects at a physical level can give a robot a connecting mechanism to the higher level system. A previous experiment showed that a robot can skillfully manipulate an object if it is provided with the right mathematical models and controllers [1]. We want to expand this experiment by creating a system that can generalize this type of object manipulation capabilities to many more objects and tasks. In this paper we propose an architecture that helps bridge this gap by using insights from primate cognition. This system enables robots to handle more objects, deal better with tools, and facilitate the process of reasoning about actions and their expected outcomes. We exercised our implementation with some simple testing object models, and were able to corroborate its proper behavior under the proposed circumstances.
目前最重要的挑战之一是将机器人带出工厂车间,与人类一起工作。由于这些环境的特点是对象种类繁多,因此一个关键因素是为它们提供更好的自适应对象操作技能。这意味着机器人需要以一种有意义的方式将高水平的任务与机器人的身体运动联系起来。在物理层面上理解物体可以给机器人一个连接到更高层次系统的机制。先前的实验表明,如果为机器人提供正确的数学模型和控制器,机器人可以熟练地操纵物体[1]。我们希望通过创建一个系统来扩展这个实验,该系统可以将这种类型的对象操作能力推广到更多的对象和任务中。在本文中,我们提出了一种架构,通过使用灵长类动物认知的见解来帮助弥合这一差距。该系统使机器人能够处理更多的物体,更好地处理工具,并促进对行动及其预期结果的推理过程。我们用一些简单的测试对象模型来执行我们的实现,并且能够在建议的环境下证实它的正确行为。
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引用次数: 1
A Systems Biology Approach to Identify Candidate Targets to Downregulate Angiogenic Gene Expression in Cancer 肿瘤血管生成基因表达下调候选靶点的系统生物学方法
Pub Date : 2018-07-01 DOI: 10.1109/IWOBI.2018.8464137
Calderon-Gomez Paola, Man-Sai Aeón-Chan, R. Mora-Rodríguez
The control of angiogenesis in cancer has been recognized as a promising therapeutic target for many diseases like cancer. Specifically, the Angiopoietin-2 - Vascular Endothelial Growth Factor system has demonstrated special relevance in the regulation of angiogenesis, highlighting the importance of the complex coordination among vascular signaling molecules [3] for the identification of targets for future anti-angiogenic therapy. Current approaches to regulate the angiogenesis process focus their efforts only on VEGF regulation but this has proven ineffective in many kinds of cancer, prompting the need for further understanding of how the vasculature can be effectively targeted in tumors [9]. Given the complex properties of gene expression in this process, a Systems Biology approach is required to identify putative candidates to robustly regulate genes involved in angiogenesis. We propose a model with candidate targets to downregulate the angiogenic genes expression. We identified a strong regulation of the AKT1-ANGPT2-KDR axis by miR200B and miR200C. Also, we identified a strong regulation of SRC by miR34a. These candidate miRNAs could therefore have a potential for the development of novel therapeutic strategies against angiogenesis in cancer.
肿瘤血管生成的控制已被认为是许多疾病如癌症的有前景的治疗靶点。具体来说,血管生成素-2 -血管内皮生长因子系统在血管生成的调控中表现出特殊的相关性,这突出了血管信号分子之间复杂协调的重要性[3],这对于确定未来抗血管生成治疗的靶点至关重要。目前调节血管生成过程的方法只集中在VEGF的调节上,但这在许多癌症中被证明是无效的,这促使人们需要进一步了解血管系统如何在肿瘤中有效靶向[9]。考虑到这一过程中基因表达的复杂特性,需要系统生物学方法来确定可能的候选基因,以强有力地调节参与血管生成的基因。我们提出了一个具有候选靶点的模型来下调血管生成基因的表达。我们发现miR200B和miR200C对AKT1-ANGPT2-KDR轴有很强的调控作用。此外,我们还发现miR34a对SRC有很强的调控作用。因此,这些候选mirna可能具有开发针对癌症血管生成的新治疗策略的潜力。
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引用次数: 0
Xylem Vessels Segmentation Through a Deep Learning Approach: a First Look 通过深度学习方法分割木质部血管:第一眼
Pub Date : 2018-07-01 DOI: 10.1109/IWOBI.2018.8464184
Á. García-Pedrero, A. García‐Cervigón, Cristina Caetano, S. C. Ramírez, J. M. Olano, C. Gonzalo-Martín, M. Lillo-Saavedra, M. García-Hidalgo
Xylem is a vascular tissue that conveys water and dissolved minerals from the roots to the rest of the plant and also provides physical support. The most important cells present in xylem are called vessels. These cells are arranged to form long pipes that carry water through the tree. The identification, counting and subsequent characterization of xylem vessels is essential for monitoring tree health and its relationship with climatic conditions. Although automatic and semi-automatic image processing tools are available to analyze the structure of xylem at the cellular level, they usually require the supervision of an expert to obtain optimal segmentation, making it a highly time-consuming process. To overcome this limitation, a Convolutional Neural Network model was used to process digital images of 23 branch sections in order to segment the xylem vessels. The obtained results were compared with other two classical methods, Otsu's thresholding method, and an active contour method known as Chan-Vese segmentation algorithm. The obtained results show the potential of convolutional neural networks to overcome aspects such as non-homogeneous illumination of images, where conventional methods tend to obtain unsatisfactory results.
木质部是一种维管组织,它将水和溶解的矿物质从根部输送到植物的其他部位,并提供物理支持。木质部中最重要的细胞被称为血管。这些细胞排列成长长的管道,把水输送到树的各个部位。木质部导管的鉴定、计数和随后的表征对于监测树木健康及其与气候条件的关系至关重要。虽然自动和半自动图像处理工具可用于在细胞水平上分析木质部的结构,但它们通常需要专家的监督才能获得最佳分割,这是一个非常耗时的过程。为了克服这一限制,利用卷积神经网络模型对23个分枝切片的数字图像进行处理,以便对木质部导管进行分割。将得到的结果与另外两种经典方法Otsu的阈值分割法和活动轮廓法Chan-Vese分割算法进行了比较。所获得的结果表明,卷积神经网络有潜力克服图像的非均匀照明等问题,而传统方法往往无法获得令人满意的结果。
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引用次数: 8
Identification of the Internal Resistance in Solar Modules Under Dark Conditions Using Differential Evolution Algorithm 基于差分进化算法的黑暗条件下太阳能组件内阻辨识
Pub Date : 2018-07-01 DOI: 10.1109/IWOBI.2018.8464197
L. D. Murillo-Soto, Geovanni Figueroa-Mata, Carlos Meza
One of the main concern of the maintenance operation in solar plants is the early identification of faults in solar panels. Several faults in solar panels reflects on the variation of its internal resistance. This work presents and validates a differential evolution algorithm that is capable of identifying the changes on the internal resistance of photo-voltaic (PV) modules under dark conditions. Such algorithm enables the automated test of PV modules during the night, when the identification operations do not affect the PV installation energy generation.
太阳能电站维护运行的主要问题之一是太阳能电池板故障的早期识别。太阳能电池板的一些故障反映了其内阻的变化。这项工作提出并验证了一种差分进化算法,该算法能够识别在黑暗条件下光伏(PV)模块内阻的变化。该算法可以在夜间对光伏组件进行自动化测试,此时的识别操作不会影响光伏装置的发电量。
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引用次数: 4
Goniometry-based Glitch-Correction Algorithm for Optical Motion Capture Data 基于角度测量的光学运动捕捉数据差错校正算法
Pub Date : 2018-07-01 DOI: 10.1109/IWOBI.2018.8464198
M. Castresana, Francisco Siles
Nowadays , motion capture technology is used in productions of all levels in 3D Animation. The concept on which this technology is based on, consists of the elaboration of 3D models from numerical data taken by a set of sensors (for example infrared cameras) interpreted by a software. The problem with this technology is that the processing of data generated by these sensors is not always accurate, causing loss of positional data which results in errors called glitches, that produce corrupted 3D models. In this work, a goniometry-based algorithm to detect, locate and correct the glitches generated from optical motion capture data is presented. Based on the classification of angular measures of the articular physiology in humans, a pattern recognition approach was used to construct the algorithm. The proposed algorithm produces average F1-scores of 0.956 using synthetical data, and produces natural results in most of the cases for real data.
如今,动作捕捉技术被应用于3D动画的各个层面。这项技术所基于的概念是由一组传感器(例如红外摄像机)通过软件解释的数值数据组成的3D模型。这项技术的问题在于,这些传感器产生的数据处理并不总是准确的,这会导致位置数据的丢失,从而导致被称为小故障的错误,从而产生损坏的3D模型。在这项工作中,提出了一种基于几何的算法来检测、定位和纠正由光学运动捕捉数据产生的故障。在对人体关节生理角度测量进行分类的基础上,采用模式识别方法构建了该算法。本文算法在综合数据下的平均f1得分为0.956,在真实数据下大多数情况下得到的结果都很自然。
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引用次数: 2
期刊
2018 IEEE International Work Conference on Bioinspired Intelligence (IWOBI)
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