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Leveraging the tug-of-war with genomic retroelements to enhance immunotherapy of pancreatic cancer 利用基因组逆转录酶的拉锯战加强胰腺癌的免疫疗法
IF 24.5 1区 医学 Q1 GASTROENTEROLOGY & HEPATOLOGY
Gut
Pub Date : 2024-10-22 DOI: 10.1136/gutjnl-2024-333702
Elisa Espinet, Gioacchino Natoli
Pancreatic ductal adenocarcinoma (PDAC) remains one of the most lethal malignancies, with a dismal 5-year survival rate of less than 10%.1 Despite significant advances in cancer treatment over the past decades, PDAC has stubbornly defied progress, with most patients showing limited response to standard chemotherapy regimens. Perhaps most disappointingly, the revolutionary success of immunotherapy in various cancer types has not translated to PDAC, with checkpoint inhibitors and other immunomodulatory strategies showing dismally low response rates.2 This lack of efficacy is thought to be largely due to the characteristic PDAC tumour microenvironment (TME) that contributes to make this cancer immunologically ‘cold’.3 Characterised by a dense stromal compartment, low T cell infiltration and an overall immunosuppressive microenvironment, PDACs present a formidable barrier to the immune system that ultimately explains the inefficiency of current immunotherapeutic approaches. Whether and to what extent strategies can be identified to convert these ‘cold’ tumours into ‘hot’ ones and ultimately improve immune checkpoint blockade (ICB) efficacy in PDAC remains to be determined. One such strategy leverages the impact of epigenetic regulators in the control of genomic transposable elements, which comprise retrotransposons (or retroelements, including endogenous retroviruses, ERVs) and DNA transposons.4 Indeed, one …
胰腺导管腺癌(PDAC)仍然是最致命的恶性肿瘤之一,5 年生存率不到 10%,令人沮丧。1 尽管过去几十年来癌症治疗取得了重大进展,但 PDAC 顽固地拒绝进步,大多数患者对标准化疗方案的反应有限。也许最令人失望的是,免疫疗法在各种癌症类型中取得的革命性成功并没有应用于 PDAC,检查点抑制剂和其他免疫调节策略的反应率低得令人沮丧。3 PDAC 的特点是致密的基质区、低 T 细胞浸润和整体免疫抑制性微环境,这对免疫系统构成了巨大的障碍,最终导致目前的免疫治疗方法效率低下。是否能找到将这些 "冷 "肿瘤转化为 "热 "肿瘤的策略,并在多大程度上最终提高免疫检查点阻断疗法(ICB)在 PDAC 中的疗效,仍有待确定。其中一种策略是利用表观遗传调节因子在控制基因组转座元件方面的影响,转座元件包括逆转录转座子(或逆位子,包括内源性逆转录病毒 ERV)和 DNA 转座子。
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引用次数: 0
Combined MRI, high-resolution manometry and a randomised trial of bisacodyl versus hyoscine show the significance of an enlarged colon in constipation: the RECLAIM study 核磁共振成像、高分辨率测压和比沙可啶与东莨菪碱随机试验相结合,显示了结肠肥大在便秘中的重要性:RECLAIM 研究
IF 24.5 1区 医学 Q1 GASTROENTEROLOGY & HEPATOLOGY
Gut
Pub Date : 2024-10-22 DOI: 10.1136/gutjnl-2024-332755
Victoria Wilkinson-Smith, Mark Scott, Alex Menys, Lukasz Wiklendt, Luca Marciani, David Atkinson, Stefano Sansone, Ausra Zdanaviciene, Carol Coupland, Charles H Knowles, Philip Dinning, Stuart A Taylor, Penny Gowland, Caroline Louise Hoad, Maura Corsetti, Robin C Spiller
Background Colonic motility in constipation can be assessed non-invasively using MRI. Objective To compare MRI with high-resolution colonic manometry (HRCM) for predicting treatment response. Design Part 1: 44 healthy volunteers (HVs), 43 patients with irritable bowel syndrome with constipation (IBS-C) and 37 with functional constipation (FC) completed stool diaries and questionnaires and underwent oral macrogol (500–1000 mL) challenge. Whole gut transit time (WGTT), segmental colonic volumes (CV), MRI-derived Motility Index and chyme movement by ‘tagging’ were assessed using MRI and time to defecation after macrogol recorded. Left colonic HRCM was recorded before and after a 700 kcal meal. Patients then proceeded to Part 2: a randomised cross-over study of 10-days bisacodyl 10 mg daily versus hyoscine 20 mg three times per day, assessing daily pain and constipation. Results Part 1: Total CVs median (range) were significantly greater in IBS-C (776 (595–1033)) and FC (802 (633–951)) vs HV (645 (467–780)), p<0.001. Patients also had longer WGTT and delayed evacuation after macrogol. IBS-C patients showed significantly reduced tagging index and less propagated pressure wave (PPW) activity during HRCM versus HV. Compared with FC, IBS-C patients were more anxious and reported more pain. Abnormally large colons predicted significantly delayed evacuation after macrogol challenge (p<0.02), impaired manometric meal response and reduced pain with bisacodyl (p<0.05). Part 2: Bisacodyl compared with hyoscine increased bowel movements but caused more pain in both groups (p<0.03). Conclusion An abnormally large colon is an important feature in constipation which predicts impaired manometric response to feeding and treatment responses. HRCM shows that IBS-C patients have reduced PPW activity. Trial registration number The study was preregistered on ClinicalTrials.gov, Reference: [NCT03226145][1]. Data are available on reasonable request. [1]: /lookup/external-ref?link_type=CLINTRIALGOV&access_num=NCT03226145&atom=%2Fgutjnl%2Fearly%2F2024%2F10%2F22%2Fgutjnl-2024-332755.atom
背景 通过核磁共振成像可对便秘患者的结肠运动进行无创评估。目的 比较核磁共振成像与高分辨率结肠测压法(HRCM),以预测治疗反应。设计 第 1 部分:44 名健康志愿者(HVs)、43 名肠易激综合征伴便秘(IBS-C)患者和 37 名功能性便秘(FC)患者完成粪便日记和问卷调查,并接受口服大环内酯(500-1000 mL)挑战。使用核磁共振成像评估整个肠道转运时间(WGTT)、节段性结肠容积(CV)、核磁共振成像衍生的运动指数和通过 "标记 "进行的食糜运动,并记录大环内酯后的排便时间。在进食 700 千卡食物前后记录左结肠 HRCM。患者随后进行第二部分:每天 10 天比沙可啶 10 毫克与每天三次莨菪碱 20 毫克的随机交叉研究,评估日常疼痛和便秘情况。结果 第一部分:IBS-C(776 (595-1033))和 FC(802 (633-951))与 HV(645 (467-780))相比,总 CVs 中位数(范围)明显更高,P<0.001。患者的 WGTT 也更长,服用大环内酯后排空延迟。与 HV 相比,IBS-C 患者在 HRCM 期间的标记指数明显降低,传播压力波 (PPW) 活动减少。与 FC 患者相比,IBS-C 患者更焦虑,并报告更多疼痛。异常大的结肠预示着大环内酯挑战后排空明显延迟(p<0.02)、测压计进餐反应受损以及使用比沙可啶后疼痛减轻(p<0.05)。第二部分:比沙可啶与东莨菪碱相比可增加肠蠕动,但在两组中都会引起更多疼痛(p<0.03)。结论 结肠异常增大是便秘的一个重要特征,它预示着对进食和治疗反应的测压反应受损。HRCM 显示,IBS-C 患者的 PPW 活性降低。试验注册号 该研究已在 ClinicalTrials.gov 上预先注册,参考文献:[NCT03226145][1]。如有合理要求,可提供相关数据。[1]:/lookup/external-ref?link_type=CLINTRIALGOV&access_num=NCT03226145&atom=%2Fgutjnl%2Fearly%2F2024%2F10%2F22%2Fgutjnl-2024-332755.atom
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引用次数: 0
IQGAP3 signalling mediates intratumoral functional heterogeneity to enhance malignant growth IQGAP3 信号介导瘤内功能异质性,促进恶性肿瘤生长
IF 24.5 1区 医学 Q1 GASTROENTEROLOGY & HEPATOLOGY
Gut
Pub Date : 2024-10-22 DOI: 10.1136/gutjnl-2023-330390
Mitsuhiro Shimura, Junichi Matsuo, ShuChin Pang, Nawaphat Jangphattananont, Aashiq Hussain, Muhammad Bakhait Rahmat, Jung-Won Lee, Daisuke Douchi, Jasmine Jie Lin Tong, Khine Myint, Supriya Srivastava, Ming Teh, Vivien Koh, Wei Peng Yong, Jimmy Bok Yan So, Patrick Tan, Khay-Guan Yeoh, Michiaki Unno, Linda Shyue Huey Chuang, Yoshiaki Ito
Background The elevation of IQGAP3 expression in diverse cancers indicates a key role for IQGAP3 in carcinogenesis. Although IQGAP3 was established as a proliferating stomach stem cell factor and a regulator of the RAS-ERK pathway, how it drives cancer growth remains unclear. Objective We define the function of IQGAP3 in gastric cancer (GC) development and progression. Design We studied the phenotypic changes caused by IQGAP3 knockdown in three molecularly diverse GC cell lines by RNA-sequencing. In vivo tumorigenesis and lung metastasis assays corroborated IQGAP3 as a mediator of oncogenic signalling. Spatial analysis was performed to evaluate the intratumoral transcriptional and functional differences between control tumours and IQGAP3 knockdown tumours. Results Transcriptomic profiling showed that IQGAP3 inhibition attenuates signal transduction networks, such as KRAS signalling, via phosphorylation blockade. IQGAP3 knockdown was associated with significant inhibition of MEK/ERK signalling-associated growth factors, including TGFβ1, concomitant with gene signatures predictive of impaired tumour microenvironment formation and reduced metastatic potential. Xenografts involving IQGAP3 knockdown cells showed attenuated tumorigenesis and lung metastasis in immunodeficient mice. Accordingly, immunofluorescence staining revealed significant reductions of TGFβ/SMAD signalling and αSMA-positive stromal cells; digital spatial analysis indicated that IQGAP3 is indispensable for the formation of two phenotypically diverse cell subpopulations, which played crucial but distinct roles in promoting oncogenic functions. Conclusion IQGAP3 knockdown suppressed the RAS-TGFβ signalling crosstalk, leading to a significant reduction of the tumour microenvironment. In particular, IQGAP3 maintains functional heterogeneity of cancer cells to enhance malignant growth. IQGAP3 is thus a highly relevant therapy target in GC. Data are available upon reasonable request. All data relevant to the study are included in the article or uploaded as supplementary information. Raw data of RNA sequence is available on GEO: GSE231642.
背景 各种癌症中 IQGAP3 表达的升高表明 IQGAP3 在致癌过程中起着关键作用。虽然 IQGAP3 被认为是一种增殖的胃干细胞因子和 RAS-ERK 通路的调节因子,但它是如何驱动癌症生长的仍不清楚。目的 界定 IQGAP3 在胃癌(GC)发生和发展中的功能。设计 我们通过 RNA 序列分析研究了 IQGAP3 基因敲除在三种分子不同的 GC 细胞系中引起的表型变化。体内肿瘤发生和肺转移实验证实了 IQGAP3 是致癌信号的介质。进行了空间分析,以评估对照肿瘤和 IQGAP3 敲除肿瘤之间的瘤内转录和功能差异。结果 转录组分析表明,抑制 IQGAP3 可通过磷酸化阻断削弱信号转导网络,如 KRAS 信号。IQGAP3基因敲除与MEK/ERK信号相关生长因子(包括TGFβ1)的显著抑制有关,同时基因特征可预测肿瘤微环境形成受损和转移潜力降低。在免疫缺陷小鼠体内,IQGAP3 基因敲除细胞的异种移植显示出肿瘤发生和肺转移的减弱。相应地,免疫荧光染色显示,TGFβ/SMAD 信号和 αSMA 阳性基质细胞显著减少;数字空间分析表明,IQGAP3 对两种表型不同的细胞亚群的形成不可或缺,这两种细胞亚群在促进致癌功能方面发挥着关键但不同的作用。结论 IQGAP3 的敲除抑制了 RAS-TGFβ 信号的串联,从而显著降低了肿瘤微环境。特别是,IQGAP3 可维持癌细胞的功能异质性,从而促进恶性生长。因此,IQGAP3 是与 GC 高度相关的治疗靶点。如有合理要求,可提供相关数据。所有与研究相关的数据都包含在文章中或作为补充信息上传。RNA 序列的原始数据可在 GEO 上获取:GSE231642。
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引用次数: 0
QUAIDE - Quality assessment of AI preclinical studies in diagnostic endoscopy QUAIDE - 内窥镜诊断人工智能临床前研究的质量评估
IF 24.5 1区 医学 Q1 GASTROENTEROLOGY & HEPATOLOGY
Gut
Pub Date : 2024-10-15 DOI: 10.1136/gutjnl-2024-332820
Giulio Antonelli, Diogo Libanio, Albert Jeroen De Groof, Fons van der Sommen, Pietro Mascagni, Pieter Sinonquel, Mohamed Abdelrahim, Omer Ahmad, Tyler Berzin, Pradeep Bhandari, Michael Bretthauer, Miguel Coimbra, Evelien Dekker, Alanna Ebigbo, Tom Eelbode, Leonardo Frazzoni, Seth A Gross, Ryu Ishihara, Michal Filip Kaminski, Helmut Messmann, Yuichi Mori, Nicolas Padoy, Sravanthi Parasa, Nastazja Dagny Pilonis, Francesco Renna, Alessandro Repici, Cem Simsek, Marco Spadaccini, Raf Bisschops, Jacques J G H M Bergman, Cesare Hassan, Mario Dinis Ribeiro
Artificial intelligence (AI) holds significant potential for enhancing quality of gastrointestinal (GI) endoscopy, but the adoption of AI in clinical practice is hampered by the lack of rigorous standardisation and development methodology ensuring generalisability. The aim of the Quality Assessment of pre-clinical AI studies in Diagnostic Endoscopy (QUAIDE) Explanation and Checklist was to develop recommendations for standardised design and reporting of preclinical AI studies in GI endoscopy. The recommendations were developed based on a formal consensus approach with an international multidisciplinary panel of 32 experts among endoscopists and computer scientists. The Delphi methodology was employed to achieve consensus on statements, with a predetermined threshold of 80% agreement. A maximum three rounds of voting were permitted. Consensus was reached on 18 key recommendations, covering 6 key domains: data acquisition and annotation (6 statements), outcome reporting (3 statements), experimental setup and algorithm architecture (4 statements) and result presentation and interpretation (5 statements). QUAIDE provides recommendations on how to properly design (1. Methods, statements 1–14), present results (2. Results, statements 15–16) and integrate and interpret the obtained results (3. Discussion, statements 17–18). The QUAIDE framework offers practical guidance for authors, readers, editors and reviewers involved in AI preclinical studies in GI endoscopy, aiming at improving design and reporting, thereby promoting research standardisation and accelerating the translation of AI innovations into clinical practice.
人工智能(AI)在提高胃肠道(GI)内窥镜检查质量方面具有巨大潜力,但由于缺乏严格的标准化和确保通用性的开发方法,阻碍了人工智能在临床实践中的应用。诊断性内窥镜临床前人工智能研究质量评估(QUAIDE)说明和检查表旨在为消化道内窥镜临床前人工智能研究的标准化设计和报告提出建议。这些建议是在一个由 32 名内镜医师和计算机科学家组成的国际多学科专家小组达成正式共识的基础上制定的。为了就声明达成共识,采用了德尔菲法(Delphi methodology),并预先设定了 80% 的协议阈值。最多允许进行三轮投票。共就 18 项关键建议达成共识,涵盖 6 个关键领域:数据采集和注释(6 项声明)、结果报告(3 项声明)、实验设置和算法架构(4 项声明)以及结果展示和解释(5 项声明)。QUAIDE 就如何正确设计(1.方法,说明 1-14)、呈现结果(2.结果,说明 15-16)以及整合和解释所获结果(3.讨论,说明 17-18)提出了建议。QUAIDE 框架为参与消化道内窥镜人工智能临床前研究的作者、读者、编辑和审稿人提供了实用指导,旨在改进设计和报告,从而促进研究标准化,加快人工智能创新成果向临床实践的转化。
{"title":"QUAIDE - Quality assessment of AI preclinical studies in diagnostic endoscopy","authors":"Giulio Antonelli, Diogo Libanio, Albert Jeroen De Groof, Fons van der Sommen, Pietro Mascagni, Pieter Sinonquel, Mohamed Abdelrahim, Omer Ahmad, Tyler Berzin, Pradeep Bhandari, Michael Bretthauer, Miguel Coimbra, Evelien Dekker, Alanna Ebigbo, Tom Eelbode, Leonardo Frazzoni, Seth A Gross, Ryu Ishihara, Michal Filip Kaminski, Helmut Messmann, Yuichi Mori, Nicolas Padoy, Sravanthi Parasa, Nastazja Dagny Pilonis, Francesco Renna, Alessandro Repici, Cem Simsek, Marco Spadaccini, Raf Bisschops, Jacques J G H M Bergman, Cesare Hassan, Mario Dinis Ribeiro","doi":"10.1136/gutjnl-2024-332820","DOIUrl":"https://doi.org/10.1136/gutjnl-2024-332820","url":null,"abstract":"Artificial intelligence (AI) holds significant potential for enhancing quality of gastrointestinal (GI) endoscopy, but the adoption of AI in clinical practice is hampered by the lack of rigorous standardisation and development methodology ensuring generalisability. The aim of the Quality Assessment of pre-clinical AI studies in Diagnostic Endoscopy (QUAIDE) Explanation and Checklist was to develop recommendations for standardised design and reporting of preclinical AI studies in GI endoscopy. The recommendations were developed based on a formal consensus approach with an international multidisciplinary panel of 32 experts among endoscopists and computer scientists. The Delphi methodology was employed to achieve consensus on statements, with a predetermined threshold of 80% agreement. A maximum three rounds of voting were permitted. Consensus was reached on 18 key recommendations, covering 6 key domains: data acquisition and annotation (6 statements), outcome reporting (3 statements), experimental setup and algorithm architecture (4 statements) and result presentation and interpretation (5 statements). QUAIDE provides recommendations on how to properly design (1. Methods, statements 1–14), present results (2. Results, statements 15–16) and integrate and interpret the obtained results (3. Discussion, statements 17–18). The QUAIDE framework offers practical guidance for authors, readers, editors and reviewers involved in AI preclinical studies in GI endoscopy, aiming at improving design and reporting, thereby promoting research standardisation and accelerating the translation of AI innovations into clinical practice.","PeriodicalId":12825,"journal":{"name":"Gut","volume":null,"pages":null},"PeriodicalIF":24.5,"publicationDate":"2024-10-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142440132","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Spatial single-cell profiling and neighbourhood analysis reveal the determinants of immune architecture connected to checkpoint inhibitor therapy outcome in hepatocellular carcinoma. 空间单细胞剖析和邻域分析揭示了与肝细胞癌中检查点抑制剂治疗结果相关的免疫结构决定因素。
IF 23 1区 医学 Q1 GASTROENTEROLOGY & HEPATOLOGY
Gut
Pub Date : 2024-10-14 DOI: 10.1136/gutjnl-2024-332837
Henrike Salié, Lara Wischer, Antonio D'Alessio, Ira Godbole, Yuan Suo, Patricia Otto-Mora, Juergen Beck, Olaf Neumann, Albrecht Stenzinger, Peter Schirmacher, Claudia A M Fulgenzi, Andreas Blaumeiser, Melanie Boerries, Natascha Roehlen, Michael Schultheiß, Maike Hofmann, Robert Thimme, David J Pinato, Thomas Longerich, Bertram Bengsch

Background: The determinants of the response to checkpoint immunotherapy in hepatocellular carcinoma (HCC) remain poorly understood. The organisation of the immune response in the tumour microenvironment (TME) is expected to govern immunotherapy outcomes but spatial immunotypes remain poorly defined.

Objective: We hypothesised that the deconvolution of spatial immune network architectures could identify clinically relevant immunotypes in HCC.

Design: We conducted highly multiplexed imaging mass cytometry on HCC tissues from 101 patients. We performed in-depth spatial single-cell analysis in a discovery and validation cohort to deconvolute the determinants of the heterogeneity of HCC immune architecture and develop a spatial immune classification that was tested for the prediction of immune checkpoint inhibitor (ICI) therapy.

Results: Bioinformatic analysis identified 23 major immune, stroma, parenchymal and tumour cell types in the HCC TME. Unsupervised neighbourhood detection based on the spatial interaction of immune cells identified three immune architectures with differing involvement of immune cells and immune checkpoints dominated by either CD8 T-cells, myeloid immune cells or B- and CD4 T-cells. We used these to define three major spatial HCC immunotypes that reflect a higher level of intratumour immune cell organisation: depleted, compartmentalised and enriched. Progression-free survival under ICI therapy differed significantly between the spatial immune types with improved survival of enriched patients. In patients with intratumour heterogeneity, the presence of one enriched area governed long-term survival.

背景:人们对肝细胞癌(HCC)检查点免疫疗法反应的决定因素仍然知之甚少。肿瘤微环境(TME)中免疫反应的组织预计会影响免疫治疗的结果,但空间免疫类型的定义仍然不清:我们假设空间免疫网络结构的解卷积可以确定 HCC 中与临床相关的免疫类型:我们对来自 101 名患者的 HCC 组织进行了高度复用成像质谱分析。我们在发现和验证队列中进行了深入的空间单细胞分析,以解构 HCC 免疫结构异质性的决定因素,并开发出一种空间免疫分类方法,该方法已用于免疫检查点抑制剂(ICI)疗法的预测测试:生物信息学分析确定了HCC TME中23种主要的免疫、基质、实质和肿瘤细胞类型。基于免疫细胞空间相互作用的无监督邻域检测确定了三种免疫结构,它们由不同的免疫细胞和免疫检查点参与,以CD8 T细胞、髓样免疫细胞或B和CD4 T细胞为主。我们以此定义了三种主要的空间 HCC 免疫类型,它们反映了更高水平的瘤内免疫细胞组织:耗竭型、分区型和富集型。不同的空间免疫类型在接受 ICI 治疗后的无进展生存期有显著差异,富集型患者的生存期更长。在具有瘤内异质性的患者中,一个富集区的存在决定了患者的长期生存。
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引用次数: 0
Nuclear translocation of plasma membrane protein ADCY7 potentiates T cell-mediated antitumour immunity in HCC. 质膜蛋白 ADCY7 的核转位可增强 T 细胞介导的 HCC 抗肿瘤免疫。
IF 23 1区 医学 Q1 GASTROENTEROLOGY & HEPATOLOGY
Gut
Pub Date : 2024-10-14 DOI: 10.1136/gutjnl-2024-332902
Jianan Chen, Youhai Jiang, Minghui Hou, Chunliang Liu, Erdong Liu, Yali Zong, Xiang Wang, Zhengyuan Meng, Mingye Gu, Yu Su, Hongyang Wang, Jing Fu

Background: The potency of T cell-mediated responses is a determinant of immunotherapy effectiveness in treating malignancies; however, the clinical efficacy of T-cell therapies has been limited in hepatocellular carcinoma (HCC) owing to the extensive immunosuppressive microenvironment.

Objective: Here, we aimed to investigate the key genes contributing to immune escape in HCC and raise a new therapeutic strategy for remoulding the HCC microenvironment.

Design: The genome-wide in vivo clustered regularly interspaced short palindromic repeats (CRISPR) screen library was conducted to identify the key genes associated with immune tolerance. Single-cell RNA-seq (scRNA-seq), flow cytometry, HCC mouse models, chromatin immunoprecipitation and coimmunoprecipitation were used to explore the function and mechanism of adenylate cyclase 7 (ADCY7) in HCC immune surveillance.

Results: Here, a genome-wide in vivo CRISPR screen identified a novel immune modulator-ADCY7. The transmembrane protein ADCY7 undergoes subcellular translocation via caveolae-mediated endocytosis and then translocates to the nucleus with the help of leucine-rich repeat-containing protein 59 (LRRC59) and karyopherin subunit beta 1 (KPNB1). In the nucleus, it functions as a transcription cofactor of CCAAT/enhancer binding protein alpha (CEBPA) to induce CCL5 transcription, thereby increasing CD8+ T cell infiltration to restrain HCC progression. Furthermore, ADCY7 can be secreted as exosomes and enter neighbouring tumour cells to promote CCL5 induction. Exosomes with high ADCY7 levels promote intratumoural infiltration of CD8+ T cells and suppress HCC tumour growth.

Conclusion: We delineate the unconventional function and subcellular location of ADCY7, highlighting its pivotal role in T cell-mediated immunity in HCC and its potential as a promising treatment target.

背景:T细胞介导的反应效力是免疫疗法治疗恶性肿瘤有效性的决定因素;然而,由于肝细胞癌(HCC)具有广泛的免疫抑制微环境,T细胞疗法的临床疗效受到了限制。目的:在此,我们旨在研究导致HCC免疫逃逸的关键基因,并提出重塑HCC微环境的新治疗策略:设计:我们在全基因组范围内建立了体内簇状规则间隔短回文重复序列(CRISPR)筛选文库,以确定与免疫耐受相关的关键基因。利用单细胞RNA-seq(scRNA-seq)、流式细胞术、HCC小鼠模型、染色质免疫沉淀和共免疫沉淀等方法探讨了腺苷酸环化酶7(ADCY7)在HCC免疫监视中的功能和机制:结果:一项全基因组的体内CRISPR筛选发现了一种新型免疫调节剂--ADCY7。跨膜蛋白ADCY7通过洞穴介导的内吞作用进行亚细胞转运,然后在富含亮氨酸重复序列蛋白59(LRRC59)和karyopherin亚基β1(KPNB1)的帮助下转运至细胞核。在细胞核中,它作为 CCAAT/增强子结合蛋白 alpha(CEBPA)的转录辅助因子,诱导 CCL5 转录,从而增加 CD8+ T 细胞浸润,抑制 HCC 的进展。此外,ADCY7 还可以作为外泌体分泌,进入邻近的肿瘤细胞,促进 CCL5 的诱导。ADCY7含量高的外泌体可促进CD8+ T细胞的瘤内浸润,抑制HCC肿瘤的生长:我们描述了 ADCY7 的非常规功能和亚细胞位置,强调了它在 HCC 中 T 细胞介导的免疫中的关键作用,以及作为治疗靶点的潜力。
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引用次数: 0
Novel mouse model for studying transmural intestinal fibrosis and creeping fat formation in stricturing Crohn's disease. 用于研究严格克罗恩病中跨膜肠纤维化和爬行脂肪形成的新型小鼠模型。
IF 24.5 1区 医学 Q1 GASTROENTEROLOGY & HEPATOLOGY
Gut
Pub Date : 2024-10-14 DOI: 10.1136/gutjnl-2024-333590
Xiaofen Lv,Yunqing Zeng,Wenlong Ma,Yuan Zheng,Tengkai Wang,Mingru Liu,Di Zhang,Lixiang Li,Xiuli Zuo,Yanqing Li,Jiaoyang Lu
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引用次数: 0
Exploring the role of genetics, gut microbiota and blood metabolites in IBD. 探索遗传学、肠道微生物群和血液代谢物在 IBD 中的作用。
IF 23 1区 医学 Q1 GASTROENTEROLOGY & HEPATOLOGY
Gut
Pub Date : 2024-10-14 DOI: 10.1136/gutjnl-2024-333611
Yiwen Yuan, Xi Fu, Yiqun Deng, Yu Sun
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引用次数: 0
Endoscopic sphincterotomy to prevent post-ERCP pancreatitis after self-expandable metal stent placement for distal malignant biliary obstruction (SPHINX): a multicentre, randomised controlled trial. 内镜下括约肌切开术预防自膨胀金属支架置入治疗远端恶性胆道梗阻后的 ERCP 后胰腺炎(SPHINX):一项多中心随机对照试验。
IF 23 1区 医学 Q1 GASTROENTEROLOGY & HEPATOLOGY
Gut
Pub Date : 2024-10-10 DOI: 10.1136/gutjnl-2024-332695
Anke M Onnekink, Myrte Gorris, Noor Lh Bekkali, Philip Bos, Paul Didden, J Enrique Dominguez-Muñoz, Pieter Friederich, Emo E van Halsema, Wouter L Hazen, Nadine C van Huijgevoort, Akin Inderson, Maarten Ajm Jacobs, Jan J Koornstra, Sjoerd Kuiken, Bob Ch Scheffer, Hilbert Sloterdijk, Ellert J van Soest, Niels G Venneman, Rogier P Voermans, Thomas R de Wijkerslooth, Janneke Wonders, Roeland Zoutendijk, Serge Jlb Zweers, Paul Fockens, Robert C Verdonk, Roy L J van Wanrooij, Jeanin E Van Hooft

Background: Endoscopic retrograde cholangiopancreatography (ERCP) with fully covered self-expandable metal stent (FCSEMS) placement is the preferred approach for biliary drainage in patients with suspected distal malignant biliary obstruction (MBO). However, FCSEMS placement is associated with a high risk of post-ERCP pancreatitis (PEP). Endoscopic sphincterotomy prior to FCSEMS placement may reduce PEP risk.

Objective: To compare endoscopic sphincterotomy to no sphincterotomy prior to FCSEMS placement.

Design: This multicentre, randomised, superiority trial was conducted in 17 hospitals and included patients with suspected distal MBO. Patients were randomised during ERCP to receive either endoscopic sphincterotomy (sphincterotomy group) or no sphincterotomy (control group) prior to FCSEMS placement. The primary outcome was PEP within 30 days. Secondary outcomes included procedure-related complications and 30-day mortality. An interim analysis was performed after 50% of patients (n=259) had completed follow-up.

Results: Between May 2016 and June 2023, 297 patients were included in the intention-to-treat analysis, with 156 in the sphincterotomy group and 141 in the control group. After the interim analysis, the study was terminated prematurely due to futility. PEP did not differ between groups, occurring in 26 patients (17%) in the sphincterotomy group compared with 30 patients (21%) in the control group (relative risk 0.78, 95% CI 0.49 to 1.26, p=0.37). There were no significant differences in bleeding, perforation, cholangitis, cholecystitis or 30-day mortality.

Conclusion: This trial found that endoscopic sphincterotomy was not superior to no sphincterotomy in reducing PEP in patients with distal MBO. Therefore, there was insufficient evidence to recommend routine endoscopic sphincterotomy prior to FCEMS placement.

Trial registration number: NL5130.

背景:内镜逆行胰胆管造影术(ERCP)配合全覆盖自膨胀金属支架(FCSEMS)置入术是疑似远端恶性胆道梗阻(MBO)患者胆道引流的首选方法。然而,FCSEMS 置入术与ERCP 术后胰腺炎(PEP)的高风险相关。在放置 FCSEMS 之前进行内镜下括约肌切开术可降低 PEP 风险:比较在置入 FCSEMS 之前进行内镜下括约肌切开术和不进行括约肌切开术:这项多中心、随机、优越性试验在 17 家医院进行,包括疑似远端 MBO 患者。患者在 ERCP 期间随机接受内镜下括约肌切开术(括约肌切开术组)或在放置 FCSEMS 之前不进行括约肌切开术(对照组)。主要结果是 30 天内的 PEP。次要结果包括手术相关并发症和 30 天死亡率。在50%的患者(n=259)完成随访后进行了中期分析:2016年5月至2023年6月期间,297名患者被纳入意向治疗分析,其中括约肌切开术组156人,对照组141人。中期分析后,该研究因无效而提前终止。括约肌切开术组有 26 名患者(17%)发生 PEP,对照组有 30 名患者(21%)发生 PEP(相对风险 0.78,95% CI 0.49 至 1.26,P=0.37),组间无差异。在出血、穿孔、胆管炎、胆囊炎或30天死亡率方面没有明显差异:这项试验发现,在减少远端 MBO 患者的 PEP 方面,内镜下括约肌切开术并不比不做括约肌切开术更有优势。因此,没有足够的证据建议在放置 FCEMS 之前常规进行内镜下括约肌切开术:试验注册号:NL5130。
{"title":"Endoscopic sphincterotomy to prevent post-ERCP pancreatitis after self-expandable metal stent placement for distal malignant biliary obstruction (SPHINX): a multicentre, randomised controlled trial.","authors":"Anke M Onnekink, Myrte Gorris, Noor Lh Bekkali, Philip Bos, Paul Didden, J Enrique Dominguez-Muñoz, Pieter Friederich, Emo E van Halsema, Wouter L Hazen, Nadine C van Huijgevoort, Akin Inderson, Maarten Ajm Jacobs, Jan J Koornstra, Sjoerd Kuiken, Bob Ch Scheffer, Hilbert Sloterdijk, Ellert J van Soest, Niels G Venneman, Rogier P Voermans, Thomas R de Wijkerslooth, Janneke Wonders, Roeland Zoutendijk, Serge Jlb Zweers, Paul Fockens, Robert C Verdonk, Roy L J van Wanrooij, Jeanin E Van Hooft","doi":"10.1136/gutjnl-2024-332695","DOIUrl":"https://doi.org/10.1136/gutjnl-2024-332695","url":null,"abstract":"<p><strong>Background: </strong>Endoscopic retrograde cholangiopancreatography (ERCP) with fully covered self-expandable metal stent (FCSEMS) placement is the preferred approach for biliary drainage in patients with suspected distal malignant biliary obstruction (MBO). However, FCSEMS placement is associated with a high risk of post-ERCP pancreatitis (PEP). Endoscopic sphincterotomy prior to FCSEMS placement may reduce PEP risk.</p><p><strong>Objective: </strong>To compare endoscopic sphincterotomy to no sphincterotomy prior to FCSEMS placement.</p><p><strong>Design: </strong>This multicentre, randomised, superiority trial was conducted in 17 hospitals and included patients with suspected distal MBO. Patients were randomised during ERCP to receive either endoscopic sphincterotomy (sphincterotomy group) or no sphincterotomy (control group) prior to FCSEMS placement. The primary outcome was PEP within 30 days. Secondary outcomes included procedure-related complications and 30-day mortality. An interim analysis was performed after 50% of patients (n=259) had completed follow-up.</p><p><strong>Results: </strong>Between May 2016 and June 2023, 297 patients were included in the intention-to-treat analysis, with 156 in the sphincterotomy group and 141 in the control group. After the interim analysis, the study was terminated prematurely due to futility. PEP did not differ between groups, occurring in 26 patients (17%) in the sphincterotomy group compared with 30 patients (21%) in the control group (relative risk 0.78, 95% CI 0.49 to 1.26, p=0.37). There were no significant differences in bleeding, perforation, cholangitis, cholecystitis or 30-day mortality.</p><p><strong>Conclusion: </strong>This trial found that endoscopic sphincterotomy was not superior to no sphincterotomy in reducing PEP in patients with distal MBO. Therefore, there was insufficient evidence to recommend routine endoscopic sphincterotomy prior to FCEMS placement.</p><p><strong>Trial registration number: </strong>NL5130.</p>","PeriodicalId":12825,"journal":{"name":"Gut","volume":null,"pages":null},"PeriodicalIF":23.0,"publicationDate":"2024-10-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142400035","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Effects of tenofovir disoproxil fumarate on intrahepatic viral burden and liver immune microenvironment in patients with chronic hepatitis B 富马酸替诺福韦酯对慢性乙型肝炎患者肝内病毒负荷和肝脏免疫微环境的影响
IF 24.5 1区 医学 Q1 GASTROENTEROLOGY & HEPATOLOGY
Gut
Pub Date : 2024-10-08 DOI: 10.1136/gutjnl-2024-332526
David Z Pan, Cameron M Soulette, Abhishek Aggarwal, Dong Han, Nicholas van Buuren, Peiwen Wu, Becket Feierbach, Jaw-Town Lin, Cheng-Hao Tseng, Chi-Yi Chen, Bryan Downie, Hongmei Mo, Lauri Diehl, Li Li, Simon P Fletcher, Scott Balsitis, Ricardo Ramirez, Vithika Suri, Yao-Chun Hsu
Background The impact of nucleos(t)ide analogues on intrahepatic viral burden and immune microenvironment in patients with chronic hepatitis B (CHB) is not clear. Objective We aimed to characterise the effects of tenofovir disoproxil fumarate (TDF) on intrahepatic viral burden and the liver immune microenvironment in patients with CHB. Design Core liver biopsies were collected at baseline and year 3 from patients with CHB with minimally raised serum alanine aminotransferase in a double-blind placebo-controlled trial ([NCT01522625][1]). Paired biopsies were analysed by RNA-sequencing (n=119 pairs), a custom multiplex immunofluorescence assay (n=30 pairs), and HBV-targeted long-read DNA sequencing (n=49 pairs). Results Both non-integrated and integrated HBV DNA were present in all patients at baseline, with >65% having interchromosomal translocations. Treatment significantly reduced the frequency of HBV core+ hepatocytes and intrahepatic (integrated and non-integrated) HBV DNA, but had no effect on HBsAg+ hepatocytes. Clonally expanded integrations were enriched for HBsAg coding regions and showed dysregulation of nearby genes. At baseline, there was significant enrichment of intrahepatic CD8+ T cell proximity to HBV core+ hepatocytes, but not to HBsAg+ cells. The densities of T cells and B cells were significantly reduced by TDF. Transcriptomic analyses found TDF induced widespread downregulation of immune-related genes including inhibitory and regulatory genes. Conclusion TDF significantly reduced intrahepatic integrated and non-integrated HBV DNA, exerting disparate effects on HBV core+ and HBsAg+ cells and on different immune cell subsets. Our data suggest there may be differential cytotoxic T cell-mediated killing of HBV core+ versus HBsAg+ hepatocytes, providing insights for HBV cure strategies. Data are available upon reasonable request. Data collected for this study, including deidentified individual participant data and data dictionaries defining fields in the datasets, will be made available on request to with qualified external researchers based on submitted curriculum vitae and reflecting non conflict of interest as well as laws and regulations regarding patient privacy. Approval of such requests is dependent on the nature of the request, the merit of the research proposed, the availability of the data and the intended use of the data. Data requests should be sent to the corresponding author at holdenhsu@gmail.com. [1]: /lookup/external-ref?link_type=CLINTRIALGOV&access_num=NCT01522625&atom=%2Fgutjnl%2Fearly%2F2024%2F10%2F08%2Fgutjnl-2024-332526.atom
背景 核苷(t)ide 类似物对慢性乙型肝炎(CHB)患者肝内病毒负荷和免疫微环境的影响尚不清楚。目的 我们旨在描述富马酸替诺福韦二吡呋酯(TDF)对慢性乙型肝炎患者肝内病毒负荷和肝脏免疫微环境的影响。设计 在一项双盲安慰剂对照试验([NCT01522625][1])中,对血清丙氨酸氨基转移酶轻度升高的CHB患者在基线期和第3年进行了肝脏核心活检。通过 RNA 测序(119 对)、定制的多重免疫荧光检测(30 对)和 HBV 靶向长读 DNA 测序(49 对)对配对活检组织进行了分析。结果 所有患者基线时均存在非整合型和整合型 HBV DNA,超过 65% 的患者存在染色体间易位。治疗明显降低了 HBV 核心+肝细胞和肝内(整合和非整合)HBV DNA 的频率,但对 HBsAg+ 肝细胞没有影响。克隆扩增的整合富集于 HBsAg 编码区,并显示出附近基因的失调。基线时,肝内 CD8+ T 细胞与 HBV 核心+肝细胞的邻近度明显增高,但与 HBsAg+ 细胞的邻近度并不增高。TDF显著降低了T细胞和B细胞的密度。转录组分析发现,TDF诱导了免疫相关基因(包括抑制基因和调节基因)的广泛下调。结论 TDF 能明显降低肝内整合和非整合 HBV DNA,对 HBV 核心+和 HBsAg+ 细胞以及不同的免疫细胞亚群产生不同的影响。我们的数据表明,细胞毒性 T 细胞介导的对 HBV 核心+和 HBsAg+ 肝细胞的杀伤可能存在差异,这为 HBV 治疗策略提供了启示。如有合理要求,可提供相关数据。为本研究收集的数据,包括去身份化的个体参与者数据和定义数据集中字段的数据字典,将根据提交的简历和非利益冲突以及有关患者隐私的法律法规,应要求提供给合格的外部研究人员。是否批准此类请求取决于请求的性质、建议研究的价值、数据的可用性以及数据的预期用途。数据申请应发送至相应作者的邮箱:holdenhsu@gmail.com。[1]:/lookup/external-ref?link_type=CLINTRIALGOV&access_num=NCT01522625&atom=%2Fgutjnl%2Fearly%2F2024%2F10%2F08%2Fgutjnl-2024-332526.atom
{"title":"Effects of tenofovir disoproxil fumarate on intrahepatic viral burden and liver immune microenvironment in patients with chronic hepatitis B","authors":"David Z Pan, Cameron M Soulette, Abhishek Aggarwal, Dong Han, Nicholas van Buuren, Peiwen Wu, Becket Feierbach, Jaw-Town Lin, Cheng-Hao Tseng, Chi-Yi Chen, Bryan Downie, Hongmei Mo, Lauri Diehl, Li Li, Simon P Fletcher, Scott Balsitis, Ricardo Ramirez, Vithika Suri, Yao-Chun Hsu","doi":"10.1136/gutjnl-2024-332526","DOIUrl":"https://doi.org/10.1136/gutjnl-2024-332526","url":null,"abstract":"Background The impact of nucleos(t)ide analogues on intrahepatic viral burden and immune microenvironment in patients with chronic hepatitis B (CHB) is not clear. Objective We aimed to characterise the effects of tenofovir disoproxil fumarate (TDF) on intrahepatic viral burden and the liver immune microenvironment in patients with CHB. Design Core liver biopsies were collected at baseline and year 3 from patients with CHB with minimally raised serum alanine aminotransferase in a double-blind placebo-controlled trial ([NCT01522625][1]). Paired biopsies were analysed by RNA-sequencing (n=119 pairs), a custom multiplex immunofluorescence assay (n=30 pairs), and HBV-targeted long-read DNA sequencing (n=49 pairs). Results Both non-integrated and integrated HBV DNA were present in all patients at baseline, with >65% having interchromosomal translocations. Treatment significantly reduced the frequency of HBV core+ hepatocytes and intrahepatic (integrated and non-integrated) HBV DNA, but had no effect on HBsAg+ hepatocytes. Clonally expanded integrations were enriched for HBsAg coding regions and showed dysregulation of nearby genes. At baseline, there was significant enrichment of intrahepatic CD8+ T cell proximity to HBV core+ hepatocytes, but not to HBsAg+ cells. The densities of T cells and B cells were significantly reduced by TDF. Transcriptomic analyses found TDF induced widespread downregulation of immune-related genes including inhibitory and regulatory genes. Conclusion TDF significantly reduced intrahepatic integrated and non-integrated HBV DNA, exerting disparate effects on HBV core+ and HBsAg+ cells and on different immune cell subsets. Our data suggest there may be differential cytotoxic T cell-mediated killing of HBV core+ versus HBsAg+ hepatocytes, providing insights for HBV cure strategies. Data are available upon reasonable request. Data collected for this study, including deidentified individual participant data and data dictionaries defining fields in the datasets, will be made available on request to with qualified external researchers based on submitted curriculum vitae and reflecting non conflict of interest as well as laws and regulations regarding patient privacy. Approval of such requests is dependent on the nature of the request, the merit of the research proposed, the availability of the data and the intended use of the data. Data requests should be sent to the corresponding author at holdenhsu@gmail.com. [1]: /lookup/external-ref?link_type=CLINTRIALGOV&access_num=NCT01522625&atom=%2Fgutjnl%2Fearly%2F2024%2F10%2F08%2Fgutjnl-2024-332526.atom","PeriodicalId":12825,"journal":{"name":"Gut","volume":null,"pages":null},"PeriodicalIF":24.5,"publicationDate":"2024-10-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142385581","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
期刊
Gut
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