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Exploring the vaginal ecosystem: insights into host-microbe interactions and microbial community dynamics. 探索阴道生态系统:对宿主-微生物相互作用和微生物群落动态的见解。
IF 2.8 3区 医学 Q3 IMMUNOLOGY Pub Date : 2025-09-09 Epub Date: 2025-08-11 DOI: 10.1128/iai.00499-24
Emily F Landolt, Jéssica da Conceição Mendonça, Abbey E Behler, Stephen W Lumsdaine, Tamanna Jafar, Lindsey R Burcham

The vaginal tract is a complex environment that changes throughout various life stages. Recent advances have improved our understanding of the vaginal microbiota and the influence of host factors on microbial colonization. The vaginal niche is characterized by unique qualities such as high abundances of glycogen and mucin, low pH, active cellular immunity, and fluctuations in hormone signaling that support a complex microbiota. While traditionally thought to be dominated by Lactobacillus species, emerging research highlights a more diverse microbiota, including both commensal and potentially pathogenic microbes. Given the interconnectedness of the microbial and host factors in this environment, minor shifts can lead to significant downstream effects on health. This review takes an ecosystems approach to explore the multifaceted relationship between the vaginal mucosa, the microbiota, and influences of environmental factors on shaping the two. We discuss the contribution of hormone signaling in shaping microbial communities, concepts of vaginal community stability and dysbiosis, and the emerging understanding of microbial metabolism and cross-feeding dynamics within the vaginal tract. Additionally, we will examine the interactions between microbes and immune cells in the vaginal mucosa, including mechanisms by which the immune system modulates the local environment. By considering the feedback loops between the host and the resident microbiota, we propose key knowledge gaps and suggest interdisciplinary avenues for future research aimed at improving our understanding of vaginal health and disease. Understanding these complex interactions is important for advancing vaginal healthcare across all individuals.

阴道是一个复杂的环境,在生命的各个阶段都会发生变化。最近的进展提高了我们对阴道微生物群和宿主因素对微生物定植的影响的理解。阴道生态位具有独特的特征,如糖原和粘蛋白丰度高、pH值低、细胞免疫活跃、激素信号波动,支持复杂的微生物群。虽然传统上被认为是由乳酸菌物种主导,但新兴的研究强调了更多样化的微生物群,包括共生微生物和潜在的致病微生物。鉴于这种环境中微生物和宿主因素的相互联系,微小的变化可能导致对健康的重大下游影响。本文从生态系统的角度探讨了阴道粘膜、微生物群之间的多方面关系,以及环境因素对两者形成的影响。我们讨论了激素信号在形成微生物群落中的作用,阴道群落稳定性和生态失调的概念,以及对阴道内微生物代谢和交叉摄食动力学的新认识。此外,我们将研究阴道粘膜中微生物和免疫细胞之间的相互作用,包括免疫系统调节局部环境的机制。通过考虑宿主和常驻微生物群之间的反馈回路,我们提出了关键的知识空白,并建议跨学科的途径,以提高我们对阴道健康和疾病的理解。了解这些复杂的相互作用对促进所有个体的阴道保健非常重要。
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引用次数: 0
Candida albicans gastrointestinal colonization resistance: a host-microbiome balancing act. 白色念珠菌胃肠道定植抵抗:宿主-微生物平衡行为。
IF 2.8 3区 医学 Q3 IMMUNOLOGY Pub Date : 2025-09-09 Epub Date: 2025-08-11 DOI: 10.1128/iai.00610-24
Derek J Bays, Hannah P Savage

While Candida albicans is a common, commensal yeast colonizing 50%-60% of humans, it has the potential to expand in the gastrointestinal tract and enter the blood stream resulting in invasive candidiasis. Invasive candidiasis carries a mortality approaching 50%, especially in the most vulnerable, immunocompromised population. Antibacterial use causes an increase in C. albicans gastrointestinal colonization, indicating that the colonic microbiota plays a major role in preventing an uncontrolled expansion, a phenomenon known as colonization resistance. Antibacterials, medications, diet, and co-morbid conditions can all alter the microbiome, creating an altered environment known as dysbiosis. Our understanding of the microbiome continues to advance, and there is increasing evidence that the interactions that the microbiome has on the host are vital in maintaining colonization resistance to pathogens including C. albicans. This review will focus on colonization resistance to C. albicans within the gastrointestinal tract. The scope includes the benefits and consequences of C. albicans colonization, interkingdom interactions of the microbiome on C. albicans, microbiome-host interactions and how these modulate C. albicans colonization, and the impact of medications and diet on colonization resistance.

虽然白色念珠菌是一种常见的共生酵母菌,在50%-60%的人体内定植,但它有可能在胃肠道中扩张并进入血液,导致侵袭性念珠菌病。侵袭性念珠菌病的死亡率接近50%,特别是在最脆弱、免疫功能低下的人群中。抗菌药物的使用导致白色念珠菌胃肠道定植增加,表明结肠微生物群在防止不受控制的扩张中起主要作用,这种现象被称为定植抗性。抗菌剂、药物、饮食和合并症都可以改变微生物群,造成被称为生态失调的环境改变。我们对微生物组的理解不断进步,越来越多的证据表明,微生物组对宿主的相互作用对于维持对包括白色念珠菌在内的病原体的定植抗性至关重要。本文将重点讨论胃肠道内白色念珠菌的定植耐药性。范围包括白色念珠菌定植的益处和后果,微生物组对白色念珠菌的王国间相互作用,微生物组-宿主相互作用以及这些相互作用如何调节白色念珠菌定植,以及药物和饮食对定植耐药性的影响。
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引用次数: 0
Structural and functional characterization of IdeC, a novel IgG-specific protease of Streptococcus canis. 犬链球菌新型igg特异性蛋白酶IdeC的结构和功能表征
IF 2.8 3区 医学 Q3 IMMUNOLOGY Pub Date : 2025-09-09 Epub Date: 2025-07-31 DOI: 10.1128/iai.00248-25
Saoirse Walsh, Antje-Maria Lapschies, Vega Miguel-Ruano, María T Batuecas, Iván Acebrón-Ávalos, Thomas P Kohler, Sven Hammerschmidt, Inga Eichhorn, Juan A Hermoso, Marcus Fulde

Streptococcus canis is an important opportunistic pathogen of cats, dogs, and cows, which can cause a range of infections, ranging from skin and soft tissue infections to septicemia and endocarditis. As a zoonotic agent, S. canis has also recently been implicated in serious human infections, following trauma or immunosuppression. In this work, we describe a novel protease of S. canis, termed IdeC (Immunoglobulin G degrading enzyme of S. canis), which may be involved in bacterial immune evasion. The cleaving ability of IdeC against IgG from various species was assessed; this revealed that IdeC successfully cleaved canine, feline, and human IgG. We also confirmed that IdeC is a cysteine protease, similar to IdeS of Streptococcus pyogenes. Investigation of the cleavage site in IgG sequences showed that it is highly conserved across IgGs from all species tested. From this analysis, it was determined that IdeC cleavage occurs between the CH2 and hinge regions of IgG. Interestingly, feline IgG was consistently cleaved with the highest efficiency, with human and canine IgG displaying less efficient cleavage. High-resolution crystal structures of two IdeC constructs provided insights into the catalytic machinery and substrate recognition. Modeling of the full-length IdeC:IgG complexes for human, canine, and feline cases explains the mechanism of action of the protease and reveals the molecular basis for the observed cleavage preference for feline IgG. Understanding and managing S. canis as a pathogen is important in both veterinary and human medicine, as this bacterium underscores the need for awareness of zoonotic transmission.

犬链球菌是猫、狗和牛的重要机会致病菌,可引起一系列感染,从皮肤和软组织感染到败血症和心内膜炎。作为一种人畜共患病原体,犬链球菌最近也被认为与创伤或免疫抑制后的严重人类感染有关。在这项工作中,我们描述了一种新的犬链球菌蛋白酶,称为IdeC(犬链球菌免疫球蛋白G降解酶),它可能参与细菌的免疫逃避。测定了IdeC对不同种类IgG的裂解能力;这表明IdeC成功地切割了犬、猫和人的IgG。我们还证实了IdeC是一种半胱氨酸蛋白酶,类似于化脓性链球菌的IdeS。对IgG序列裂解位点的研究表明,它在所有被测物种的IgG中都是高度保守的。从这个分析中,可以确定IdeC切割发生在IgG的CH2和铰链区之间。有趣的是,猫IgG的切割效率最高,而人类和犬IgG的切割效率较低。两个IdeC结构的高分辨率晶体结构提供了对催化机制和底物识别的见解。对人、犬和猫的全长IdeC:IgG复合物的建模解释了蛋白酶的作用机制,并揭示了观察到的猫IgG裂解偏好的分子基础。了解和管理犬链球菌作为一种病原体在兽医和人类医学中都很重要,因为这种细菌强调了对人畜共患传播的认识的必要性。
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引用次数: 0
Infections as ecosystems: community metabolic interactions in microbial pathogenesis. 作为生态系统的感染:微生物发病机制中的群落代谢相互作用。
IF 2.8 3区 医学 Q3 IMMUNOLOGY Pub Date : 2025-09-09 Epub Date: 2025-08-04 DOI: 10.1128/iai.00530-24
Aanuoluwa E Adekoya, Shannon R West, Sydney K Arriaga, Carolyn B Ibberson

Microbes rarely exist alone; instead, they live in dynamic multi-species communities with a range of metabolic capacities. To establish within a polymicrobial community, an organism must compete with the other members of the community for space and nutrients. In addition, microbes form complex metabolic interdependencies in polymicrobial environments, and these nutrient exchanges are central to overall community function. Interactions between microbial community members dictate key processes, including nutrient cycling, tolerance to disturbances, and disease progression, and these interactions are known to depend on the environment in which they are measured. Therefore, understanding these ecological interactions is fundamental to our understanding of community composition, function, and impacts on disease. In this mini-review, we will describe the mechanisms microbes use to exchange nutrients in host-associated environments, with a focus on the oral and respiratory tracts. We will particularly emphasize the environmental factors that influence community composition and how interactions between organisms, ranging from cooperation to competition, impact nutrient bioavailability and overall community function during infection.

微生物很少单独存在;相反,它们生活在具有多种代谢能力的动态多物种群落中。为了在一个多微生物群落中建立,一个有机体必须与群落的其他成员竞争空间和营养。此外,微生物在多微生物环境中形成复杂的代谢相互依赖关系,这些营养交换对整个群落功能至关重要。微生物群落成员之间的相互作用决定了关键过程,包括营养循环、对干扰的耐受性和疾病进展,并且已知这些相互作用取决于测量它们的环境。因此,了解这些生态相互作用是我们了解群落组成、功能和对疾病影响的基础。在这篇综述中,我们将描述微生物在宿主相关环境中交换营养物质的机制,重点是口腔和呼吸道。我们将特别强调影响群落组成的环境因素,以及生物之间的相互作用,从合作到竞争,如何影响感染期间的营养生物利用度和整体群落功能。
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引用次数: 0
Yersinia pestis BipA is a novel regulator of pesticin and a type 6 secretion system. 鼠疫耶尔森菌BipA是一种新型的农药调节剂和6型分泌系统。
IF 2.8 3区 医学 Q3 IMMUNOLOGY Pub Date : 2025-09-09 Epub Date: 2025-08-11 DOI: 10.1128/iai.00191-25
Madeleine G Scott, Wanfeng Guo, Jon S Blevins, Kenneth T Appell, Roger D Pechous

Yersinia pestis is a gram-negative bacterium and the causative agent of bubonic, septicemic, and pneumonic plague. Y. pestis is most commonly transmitted to humans by infected fleas that deposit the bacteria into the dermis at the bite site, leading to bubonic plague. The bacteria ultimately access the bloodstream, and after deposition in the lung, can be transmitted person-to-person through infectious respiratory droplets, resulting in primary pneumonic plague, a highly lethal and rapidly progressing pneumonia. Pathogenesis is mediated by a suite of chromosomally encoded and plasmid-borne virulence factors, and infection is maintained by temperature-dependent coordinated modifications in gene expression that facilitate bacterial survival in both the flea and mammalian hosts. BipA (BPI-inducible protein A) is a highly conserved translational GTPase that is a Y. pestis virulence factor. BipA modulates protein expression under stress conditions, and its deletion renders Y. pestis more sensitive to killing by neutrophils and attenuates bacterial growth in a murine infection model of pneumonic plague. In the work described here, we show that BipA also regulates specific Y. pestis proteins at flea/environmental temperatures. We show that BipA is responsible for the induction of a recently described type 6 secretion system (T6SS), as well as the transcriptional regulator RovC. We also show that BipA regulates the production of the known Y. pestis bacteriocin pesticin, and that bacteria lacking BipA have a defect in competition not solely attributable to the T6SS or pesticin. Our results show that in addition to its role in the mammalian host, regulation of specific proteins by BipA also likely contributes to bacterial survival during the flea/environmental phase, where Y. pestis must compete with other species of bacteria within a particular niche.

鼠疫耶尔森氏菌是一种革兰氏阴性菌,是腺鼠疫、败血症鼠疫和肺鼠疫的病原体。鼠疫杆菌最常通过受感染的跳蚤传播给人类,跳蚤将细菌沉积在叮咬部位的真皮中,导致腺鼠疫。这种细菌最终进入血液,在肺部沉积后,可通过传染性呼吸道飞沫在人与人之间传播,导致原发性肺鼠疫,这是一种高度致命且进展迅速的肺炎。发病机制是由一系列染色体编码和质粒携带的毒力因子介导的,感染是通过温度依赖性基因表达的协调修饰来维持的,这种修饰促进了细菌在跳蚤和哺乳动物宿主中的生存。BipA (bpi诱导蛋白A)是一种高度保守的翻译GTPase,是鼠疫杆菌的毒力因子。在小鼠肺鼠疫感染模型中,BipA调节应激条件下的蛋白表达,其缺失使鼠疫耶尔森氏菌对中性粒细胞的杀伤更敏感,并减弱细菌生长。在这里描述的工作中,我们表明BipA也在跳蚤/环境温度下调节特定的鼠疫杆菌蛋白。我们发现BipA负责诱导最近描述的6型分泌系统(T6SS),以及转录调节剂RovC。我们还发现,BipA调节已知的鼠疫杆菌细菌素农药的产生,并且缺乏BipA的细菌在竞争中存在缺陷,而不仅仅是由于T6SS或农药。我们的研究结果表明,除了在哺乳动物宿主中的作用外,BipA对特定蛋白质的调节也可能有助于细菌在跳蚤/环境阶段的生存,在这个阶段,鼠疫杆菌必须在特定的生态位与其他种类的细菌竞争。
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引用次数: 0
Breaking down barriers: is intestinal mucus degradation by Akkermansia muciniphila beneficial or harmful? 打破屏障:嗜粘阿克曼氏菌降解肠道粘液是有益还是有害?
IF 2.8 3区 医学 Q3 IMMUNOLOGY Pub Date : 2025-09-09 Epub Date: 2025-08-11 DOI: 10.1128/iai.00503-24
Anna M Tingler, Melinda A Engevik

Akkermansia muciniphila is a specialized mucin-degrading bacterium that plays a pivotal role in gut health and disease. This review examines the dualistic nature of A. muciniphila mucin degradation, exploring its potential benefits and risks. As a mucin specialist, A. muciniphila uses glycosyl hydrolases and mucinases to degrade mucins, producing metabolites like short-chain fatty acids (SCFAs), branched-chain fatty acids (BCFAs), succinate, and other compounds. These metabolites benefit host health and cross-feed other commensal microbes, such as butyrate producers. A. muciniphila levels are inversely correlated with several disease states, such as obesity, diabetes, and inflammatory states, and administration of A. muciniphila has been found by several groups to restore and maintain gut homeostasis. However, under certain conditions, such as low dietary fiber or conditions with an altered gut microbiota, excessive mucin degradation by A. muciniphila can compromise the mucus barrier, increasing susceptibility to inflammation, infection, and pathogenic overgrowth. Elevated A. muciniphila levels have been associated with various diseases and medications, including graft versus host disease (GVHD) and irradiation, and shown to exacerbate infections by enteric pathogens. The context-dependent effects of A. muciniphila and mucin degradation underscore the need for a nuanced understanding of its interactions with the host and microbial community. This review aims to provide a balanced perspective on the implications of gut microbial mucus degradation, highlighting that it can be good, and it can be bad depending on the context.

嗜粘杆菌是一种特殊的粘蛋白降解细菌,在肠道健康和疾病中起着关键作用。本文综述了嗜粘杆菌黏蛋白降解的二重性,探讨了其潜在的益处和风险。作为粘蛋白专家,a . muciniphila利用糖基水解酶和粘酶降解粘蛋白,产生短链脂肪酸(SCFAs)、支链脂肪酸(BCFAs)、琥珀酸盐等代谢产物。这些代谢物有利于宿主健康,并与其他共生微生物交叉喂养,如丁酸盐生产者。嗜粘杆菌水平与几种疾病状态呈负相关,如肥胖、糖尿病和炎症状态,一些研究小组发现嗜粘杆菌可以恢复和维持肠道稳态。然而,在某些条件下,如低膳食纤维或肠道微生物群改变的条件下,嗜粘杆菌对黏液蛋白的过度降解会损害黏液屏障,增加对炎症、感染和致病性过度生长的易感性。嗜粘液芽胞杆菌水平升高与多种疾病和药物有关,包括移植物抗宿主病(GVHD)和辐射,并被证明会加剧肠道病原体的感染。嗜粘杆菌和粘蛋白降解的环境依赖效应强调了对其与宿主和微生物群落相互作用的细致理解的必要性。这篇综述旨在为肠道微生物粘液降解的影响提供一个平衡的观点,强调它可能是好的,也可能是坏的,这取决于环境。
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引用次数: 0
ETEC biofilms are regulated by magnesium and lactate bioavailability. ETEC生物膜受镁和乳酸的生物利用度调控。
IF 2.8 3区 医学 Q3 IMMUNOLOGY Pub Date : 2025-09-09 Epub Date: 2025-08-11 DOI: 10.1128/iai.00243-25
Ian E Hollifield, Kristen L Clement, Kaylynn A Fernando, Michelle D Blythe, Jacob P Bitoun

The prevailing dogma is that enterotoxigenic Escherichia coli (ETEC) use plasmid-borne colonization factors (CFs) to adhere to the intestinal epithelium, where the organisms proliferate and produce their diarrhea-causing virulence factors, the heat-stable (ST) and/or heat-labile (LT) enterotoxins. However, vaccines that target major CF antigens fail to induce complete protective immunity, indicating that ETEC may also use other antigens to colonize the small intestines. We previously demonstrated that ST intoxication limits magnesium bioavailability in the intestinal lumen, but the role of magnesium in ETEC pathogenesis has not been rigorously evaluated. Here, we demonstrate that addition of magnesium at concentrations found in the intestinal mucosa promotes biofilm formation in ETEC H10407 and other clinical isolates, especially in the presence of lactate. ETEC H10407 biofilms fail to express high levels of colonization factor antigen I(CFA/I) fimbriae, but ETEC H10407 biofilms remain significantly better than planktonic counterparts at adhering to intestinal epithelial cells. Furthermore, ETEC H10407 biofilms are more acid-resistant than their planktonic counterparts, indicating that biofilms may promote survival through gastric acidity. Finally, using intragastric infection of neonatal mice, ETEC H10407 biofilms are significantly more virulent than their planktonic counterparts. Scanning electron micrographs of biofilm-infected mice show ETEC H10407 adheres to small intestinal villi. Thus, ETEC may respond to changes in environmental conditions to alter adherence mechanisms. Therefore, identification of biofilm antigens should be prioritized in ETEC vaccine development.

普遍的观点认为,产肠毒素的大肠杆菌(ETEC)利用质粒携带的定植因子(CFs)粘附在肠上皮上,在那里微生物增殖并产生引起腹泻的毒力因子,即热稳定型(ST)和/或热不稳定型(LT)肠毒素。然而,针对主要CF抗原的疫苗不能诱导完全保护性免疫,这表明ETEC也可能使用其他抗原在小肠定植。我们之前证明ST中毒限制了镁在肠腔中的生物利用度,但镁在ETEC发病机制中的作用尚未得到严格评估。在这里,我们证明了在肠粘膜中添加浓度的镁可以促进ETEC H10407和其他临床分离株的生物膜形成,特别是在乳酸存在的情况下。ETEC H10407生物膜不能表达高水平的定植因子抗原I(CFA/I)菌膜,但ETEC H10407生物膜在粘附肠上皮细胞方面仍明显优于浮游生物膜。此外,ETEC H10407生物膜比其浮游生物膜更耐酸,这表明生物膜可能通过胃酸促进生存。最后,对新生小鼠进行胃内感染,发现ETEC H10407生物膜的毒性明显高于浮游生物膜。生物膜感染小鼠的扫描电镜显示ETEC H10407附着在小肠绒毛上。因此,ETEC可能会对环境条件的变化做出反应,从而改变粘附机制。因此,在ETEC疫苗的开发中,生物膜抗原的鉴定应优先考虑。
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引用次数: 0
Bioluminescent imaging to investigate Coxiella burnetii pathogenesis identifies adipose tissue as a host niche for infection. 生物发光成像研究伯纳氏杆菌发病机制确定脂肪组织为感染的宿主生态位。
IF 2.8 3区 医学 Q3 IMMUNOLOGY Pub Date : 2025-08-12 Epub Date: 2025-06-30 DOI: 10.1128/iai.00080-25
Jenna M Andrews, Craig R Roy

Coxiella burnetii is a gram-negative, obligate intracellular pathogen that causes Q fever in humans. In vivo research on C. burnetii is limited due to the classification of the Nine Mile phase I (NMI) strain as a select agent that requires biosafety level 3 containment. The isogenic Nine Mile phase II (NMII) strain can be cultured safely at biosafety level 2 and has been shown to infect immunocompromised mice, which suggests this strain could be used to investigate virulence phenotypes in vivo. This study developed a bioluminescent imaging (BLI) model using NMII to non-invasively monitor C. burnetii infections in mice. Here, we show that BLI enables tracking of bacteria in an animal host, identification of bacterial virulence differences, and investigation of host determinants of immunity. Using BLI, we show that NMII resides primarily in visceral adipose tissue following intraperitoneal infection of mice. Intracellular replication of C. burnetii in adipocytes was confirmed using cultured cells ex vivo. These data indicate that adipose tissue can serve as a niche for C. burnetii replication. This study underscores the utility of BLI in advancing C. burnetii research and highlights the need for further exploration into the role of adipocytes in the disease Q fever and bacterial persistence in vivo.

伯氏柯谢氏菌是一种革兰氏阴性的专性细胞内病原体,可引起人类Q热。由于九英里I期(NMI)菌株被分类为需要生物安全3级控制的选择剂,因此对伯纳蒂胞杆菌的体内研究受到限制。九英里II期(NMII)等基因菌株可以在2级生物安全水平下安全培养,并已被证明可以感染免疫功能低下的小鼠,这表明该菌株可用于体内毒力表型的研究。本研究建立了一种生物发光成像(BLI)模型,用于无创监测小鼠伯纳蒂菌感染。在这里,我们表明BLI能够跟踪动物宿主中的细菌,鉴定细菌毒力差异,并研究宿主免疫决定因素。利用BLI,我们发现NMII主要存在于小鼠腹腔感染后的内脏脂肪组织中。体外培养的脂肪细胞证实了伯氏梭菌在细胞内的复制。这些数据表明脂肪组织可以作为伯氏梭菌复制的生态位。本研究强调了BLI在推进伯氏梭菌研究中的作用,并强调了进一步探索脂肪细胞在Q热疾病和细菌体内持久性中的作用的必要性。
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引用次数: 0
Reply to Babich, "Using exosomes for universal vaccines". 答复Babich, “将外泌体用于通用疫苗”。
IF 2.8 3区 医学 Q3 IMMUNOLOGY Pub Date : 2025-08-12 Epub Date: 2025-07-09 DOI: 10.1128/iai.00207-25
Saloni Bhimani, Mariola J Ferraro
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引用次数: 0
Using exosomes for universal vaccines. 将外泌体用于通用疫苗。
IF 2.8 3区 医学 Q3 IMMUNOLOGY Pub Date : 2025-08-12 Epub Date: 2025-07-09 DOI: 10.1128/iai.00129-25
Alfred R Babich
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引用次数: 0
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Infection and Immunity
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