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Epstein-Barr Virus Detection in Lymphoproliferative Disorders: Epidemiological Characterization in Western Mexico. Epstein-Barr病毒在淋巴增生性疾病中的检测:墨西哥西部的流行病学特征。
IF 2.4 Q2 INFECTIOUS DISEASES Pub Date : 2025-08-14 DOI: 10.3390/idr17040100
Karel Cesar Licona-Lasteros, Eduardo Navarrete-Medina, Karina Franco-Topete, Sergio Yair Rodriguez-Preciado, Jaime Palomares-Marin, Gerardo Cazarez-Navarro, Ramón Antonio Franco-Topete, Iván Isidro Hernández-Cañaveral

Background/objectives: Epstein-Barr virus (EBV) detection patterns in lymphoproliferative disorders (LPDs) show significant geographical variation worldwide. Regional epidemiological data are essential for understanding viral distribution patterns and developing appropriate clinical surveillance strategies. This study aimed to determine EBV detection frequency in LPDs using available molecular and immunohistochemical methods in Western Mexico.

Methods: We conducted a cross-sectional study of 200 formalin-fixed paraffin-embedded tissue samples from patients diagnosed with LPDs (2015-2019) at Hospital Civil de Guadalajara. EBV detection combined with real-time PCR targeting the BNTp143 gene and immunohistochemistry for LMP-1 protein. Cases were classified following current WHO criteria. Statistical analysis included multivariate logistic regression, diagnostic concordance assessment, and age-stratified analysis.

Results: EBV detection frequency reached 35.5% overall, with marked differences between neoplastic (53.9%) and reactive LPDs (24.2%) (OR: 3.515; 95% CI: 1.859-6.645, p < 0.001). Hodgkin lymphoma showed the highest detection rate (80.6%), significantly exceeding non-Hodgkin lymphoma (39.3%) (OR: 6.43; 95% CI: 2.08-19.41, p = 0.001). Age-stratified analysis revealed predominant adult involvement (49.1% vs. 22.0% in young adults, p = 0.025). We identified three epidemiological categories based on detection probability patterns.

Conclusions: This study represents the first comprehensive molecular and immunohistochemical characterization of Epstein-Barr virus in lymphoproliferative disorders from Western Mexico, establishing distinct epidemiological patterns that align with Latin American regional characteristics. The validated methodology provides a reproducible framework for multi-center studies, while the epidemiological data serve as an essential baseline for future longitudinal research and resource optimization in similar healthcare settings.

背景/目的:Epstein-Barr病毒(EBV)在淋巴细胞增生性疾病(lpd)中的检测模式在世界范围内具有显著的地理差异。区域流行病学数据对于了解病毒分布模式和制定适当的临床监测策略至关重要。本研究旨在利用分子和免疫组织化学方法确定墨西哥西部lpd中EBV的检测频率。方法:我们对瓜达拉哈拉民用医院2015-2019年诊断为lpd的200例福尔马林固定石蜡包埋组织样本进行了横断面研究。EBV检测结合实时PCR靶向BNTp143基因和免疫组化检测LMP-1蛋白。病例按照世卫组织现行标准分类。统计分析包括多元逻辑回归、诊断一致性评估和年龄分层分析。结果:EBV检出率总体达到35.5%,肿瘤性lpd检出率为53.9%,反应性lpd检出率为24.2%,差异有统计学意义(OR: 3.515; 95% CI: 1.859 ~ 6.645, p < 0.001)。霍奇金淋巴瘤的检出率最高(80.6%),显著高于非霍奇金淋巴瘤(39.3%)(OR: 6.43; 95% CI: 2.08 ~ 19.41, p = 0.001)。年龄分层分析显示,成年人主要参与(49.1%对22.0%,p = 0.025)。我们根据发现概率模式确定了三种流行病学类别。结论:本研究首次对西墨西哥淋巴细胞增生性疾病中的爱泼斯坦-巴尔病毒进行了全面的分子和免疫组织化学表征,建立了与拉丁美洲地区特征一致的独特流行病学模式。经过验证的方法为多中心研究提供了可重复的框架,而流行病学数据可作为未来纵向研究和类似医疗保健环境资源优化的基本基线。
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引用次数: 0
Spatiotemporal Dynamics of Dengue in the State of Pará and the Socio-Environmental Determinants in Eastern Brazilian Amazon. 巴西东部亚马逊地区帕拉尔州登革热的时空动态和社会环境决定因素。
IF 2.4 Q2 INFECTIOUS DISEASES Pub Date : 2025-08-11 DOI: 10.3390/idr17040099
Brenda Caroline Sampaio da Silva, Ricardo José de Paula Souza E Guimarães, Bruno Spacek Godoy, Andressa Tavares Parente, Bergson Cavalcanti de Moraes, Marcia Aparecida da Silva Pimentel, Douglas Batista da Silva Ferreira, Emilene Monteiro Furtado Serra, João de Athaydes Silva Junior, Luciano Jorge Serejo Dos Anjos, Everaldo Barreiros de Souza

Background: The Amazon biome exhibits complex arboviral transmission dynamics influenced by accelerating deforestation, climate change, and socioeconomic inequities.

Objectives/methods: This study integrates official epidemiological records with socioeconomic, environmental, and climate variables by applying advanced geostatistical methods (Moran's I, SaTScan, kernel density estimation) combined with principal component analysis and negative binomial regression to assess the spatiotemporal dynamics of dengue incidence and its association with socio-environmental determinants across municipalities in Pará state (eastern Brazilian Amazon) from 2010 to 2024.

Results: Dengue incidence showed an overall decline but with marked epidemic peaks in 2010-2012, 2016, and 2024. The spatial analysis revealed significant clustering (Moran's I = 0.221, p < 0.01), with persistent high-risk hotspots across most of Pará. Of 144 municipalities, 104 exhibited significant dengue risk, while 58 maintained sustained transmission. Negative binomial regression model identified key determinants: illiteracy, low urbanization, reduced GDP, and climate variables.

Conclusions: Dengue transmission in the Amazon is driven by synergistic socio-environmental disruptions, necessitating intersectoral policies that bridge public health surveillance, sustainable land-use governance, and poverty alleviation. Priority actions include targeted vector control in high-risk clusters, coupled with integrated deforestation and climate monitoring to predict outbreak risks. The findings emphasize the urgency of implementing multisectoral interventions tailored to the territorial and socio-environmental complexities of vulnerable Amazonian regions for effective dengue control.

背景:亚马逊生物群落表现出复杂的虫媒病毒传播动态,受到森林砍伐加速、气候变化和社会经济不平等的影响。目的/方法:本研究将官方流行病学记录与社会经济、环境和气候变量相结合,采用先进的地质统计学方法(Moran’s I, SaTScan,核密度估计),结合主成分分析和负二项回归,评估2010年至2024年par州(巴西亚马逊东部)各城市登革热发病率的时空动态及其与社会环境决定因素的关系。结果:2010-2012年、2016年和2024年登革热发病率总体呈下降趋势,但有明显的流行高峰。空间分析结果显示,par地区具有显著的聚类性(Moran’s I = 0.221, p < 0.01),高风险热点地区持续存在。在144个城市中,104个存在严重登革热风险,58个保持持续传播。负二项回归模型确定了关键的决定因素:文盲、低城市化、GDP下降和气候变量。结论:亚马逊地区的登革热传播是由协同的社会环境破坏驱动的,因此需要跨部门政策,将公共卫生监测、可持续土地使用治理和减轻贫困联系起来。优先行动包括在高风险集群中有针对性地控制病媒,同时进行综合毁林和气候监测,以预测爆发风险。调查结果强调,迫切需要实施针对亚马逊脆弱地区领土和社会环境复杂性的多部门干预措施,以有效控制登革热。
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引用次数: 0
Antimicrobial Effect of Gentamicin/Heparin and Gentamicin/Citrate Lock Solutions on Staphylococcus aureus and Pseudomonas aeruginosa Clinical Strains. 庆大霉素/肝素和庆大霉素/柠檬酸锁液对金黄色葡萄球菌和铜绿假单胞菌的抑菌效果。
IF 2.4 Q2 INFECTIOUS DISEASES Pub Date : 2025-08-06 DOI: 10.3390/idr17040098
Daniel Salas-Treviño, Arantxa N Rodríguez-Rodríguez, María T Ramírez-Elizondo, Magaly Padilla-Orozco, Edeer I Montoya-Hinojosa, Paola Bocanegra-Ibarias, Samantha Flores-Treviño, Adrián Camacho-Ortiz

Background/Objectives: Hemodialysis catheter-related bloodstream infection (HD-CRBSIs) is a main cause of morbidity in hemodialysis. New preventive strategies have emerged, such as using lock solutions with antiseptic or antibiotic capacity. In this study, the antimicrobial effect was analyzed in vitro and with a catheter model of lock solutions of gentamicin (LSG), gentamicin/heparin (LSG/H), and gentamicin/citrate (LSG/C) in clinical and ATCC strains of Pseudomonas aeruginosa and Staphylococcus aureus. Methods: The formation, minimum inhibitory concentration, and minimum inhibitory concentration of the biofilm and minimum biofilm eradication concentration of the lock solutions were determined. Additionally, colony-forming unit assays were performed to evaluate the antimicrobial efficacy of the lock solutions in a hemodialysis catheter inoculation model. Results: The minimum inhibitory concentration (MIC) of planktonic cells of both P. aeruginosa and S. aureus for LSG/H and LSG/C was 4 µg/mL. In the minimum biofilm inhibitory concentration (MBIC) tests, the LSG/H was less effective than LSG/C, requiring higher concentrations for inhibition, contrary to the minimum biofilm eradication concentration (MBEC), where LSG/H was more effective. All lock solutions eradicated P. aeruginosa biofilms in the HD catheter model under standard conditions. Nevertheless, under modified conditions, the lock solutions were not as effective versus ATCC and clinical strains of S. aureus. Conclusions: Our analysis shows that the lock solutions studied managed to eradicate intraluminal mature P. aeruginosa in non-tunneled HD catheters under standard conditions. Biofilm inhibition and eradication were observed at low gentamicin concentrations, which could optimize the gentamicin concentration in lock solutions used in HD catheters.

背景/目的:血透导管相关性血流感染(HD-CRBSIs)是血透患者发病的主要原因。新的预防策略已经出现,例如使用具有防腐剂或抗生素能力的锁溶液。本研究通过体外和导管模型分析庆大霉素(LSG)、庆大霉素/肝素(LSG/H)、庆大霉素/柠檬酸盐(LSG/C)溶液对临床和ATCC株铜绿假单胞菌和金黄色葡萄球菌的抑菌效果。方法:测定生物膜的形成、最低抑菌浓度、最低抑菌浓度和最低灭菌浓度。此外,在血液透析导管接种模型中,进行菌落形成单位测定以评估锁溶液的抗菌功效。结果:铜绿假单胞菌和金黄色葡萄球菌浮游细胞对LSG/H和LSG/C的最低抑制浓度(MIC)均为4µg/mL。在最小生物膜抑制浓度(MBIC)测试中,LSG/H的抑制效果不如LSG/C,需要更高的浓度才能抑制,而在最小生物膜根除浓度(MBEC)中,LSG/H更有效。在标准条件下,所有锁溶液都能根除HD导管模型中的铜绿假单胞菌生物膜。然而,在改良条件下,锁液对ATCC和金黄色葡萄球菌临床菌株的效果不佳。结论:我们的分析表明,在标准条件下,所研究的锁溶液能够根除非隧道HD导管的腔内成熟铜绿假单胞菌。在低庆大霉素浓度下观察到生物膜的抑制和根除,这可以优化HD导管锁液中庆大霉素的浓度。
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引用次数: 0
Scrofuloderma, an Old Acquaintance: A Case Report and Literature Review. 黑棘皮病,老熟人:一例报告及文献复习。
IF 2.4 Q2 INFECTIOUS DISEASES Pub Date : 2025-08-06 DOI: 10.3390/idr17040096
Heiler Lozada-Ramos, Jorge Enrique Daza-Arana

Scrofuloderma, a cutaneous manifestation of tuberculosis, is a rare but clinically significant form of mycobacterial infection. It typically results from the local spread of Mycobacterium tuberculosis from an infected lymph node or bone area to the overlying skin. This disease is mainly characterized by chronic granulomatous inflammation, leading to skin ulcers and abscesses. Due to its nonspecific clinical presentation, scrofuloderma can mimic various dermatological conditions, making its diagnosis particularly challenging. This case report presents the clinical course of a patient who was positive for the Human Immunodeficiency Virus (HIV) with a diagnosis of scrofuloderma, managed at a tertiary healthcare center, with follow-up before and after treatment. A literature review was also made, highlighting the importance of maintaining a high index of clinical suspicion and utilizing appropriate diagnostic methods to ensure timely diagnosis.

黑皮病是肺结核的一种皮肤表现,是一种罕见但临床意义重大的分枝杆菌感染。它通常是由结核分枝杆菌从感染的淋巴结或骨区局部扩散到覆盖的皮肤引起的。本病主要表现为慢性肉芽肿性炎症,导致皮肤溃疡和脓肿。由于其非特异性临床表现,坏皮病可以模仿各种皮肤病,使其诊断特别具有挑战性。本病例报告介绍了一位人类免疫缺陷病毒(HIV)阳性诊断为硬皮病的患者的临床过程,在三级医疗保健中心进行管理,并在治疗前后进行了随访。文献回顾也强调了保持高的临床怀疑指数和使用适当的诊断方法以确保及时诊断的重要性。
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引用次数: 0
Cognitive Screening with the Italian International HIV Dementia Scale in People Living with HIV: A Cross-Sectional Study in the cART Era. 意大利国际艾滋病毒痴呆量表在艾滋病毒感染者中的认知筛查:cART时代的横断面研究。
IF 2.4 Q2 INFECTIOUS DISEASES Pub Date : 2025-08-06 DOI: 10.3390/idr17040095
Maristella Belfiori, Francesco Salis, Sergio Angioni, Claudia Bonalumi, Diva Cabeccia, Camilla Onnis, Nicola Pirisi, Francesco Ortu, Paola Piano, Stefano Del Giacco, Antonella Mandas

Background: HIV-associated neurocognitive disorders (HANDs) continue to be a significant concern, despite the advancements in prognosis achieved through Combination Antiretroviral Therapy (cART). Neuropsychological assessment, recommended by international guidelines for HANDs diagnosis, can be resource-intensive. Brief screening tools, like the International HIV Dementia Scale (IHDS) and the Montreal Cognitive Assessment (MoCA), are crucial in facilitating initial evaluations. This study aims to assess the Italian IHDS (IHDS-IT) and evaluate its sensitivity and specificity in detecting cognitive impairment in HIV patients. Methods: This cross-sectional study involved 294 patients aged ≥30 years, evaluated at the Immunology Unit of the University of Cagliari. Cognitive function was assessed using the MoCA and IHDS. Laboratory parameters, such as CD4 nadir, current CD4 count, and HIV-RNA levels, were also collected. Statistical analyses included Spearman's correlation, Receiver Operating Characteristic analysis, and the Youden J statistic to identify the optimal IHDS-IT cut-off for cognitive impairment detection. Results: The IHDS and MoCA scores showed a moderate positive correlation (Spearman's rho = 0.411, p < 0.0001). ROC analysis identified an IHDS-IT cut-off of ≤9, yielding an Area Under the Curve (AUC) of 0.76, sensitivity of 71.7%, and specificity of 67.2%. At this threshold, 73.1% of patients with MoCA scores below 23 also presented abnormal IHDS scores, highlighting the complementary utility of both cognitive assessment instruments. Conclusions: The IHDS-IT exhibited fair diagnostic accuracy for intercepting cognitive impairment, with a lower optimal cut-off than previously reported. The observed differences may reflect this study cohort's demographic and clinical characteristics, including advanced age and long-lasting HIV infection. Further, longitudinal studies are necessary to validate these findings and to confirm the proposed IHDS cut-off over extended periods.

背景:尽管抗逆转录病毒联合治疗(cART)在预后方面取得了进展,但hiv相关的神经认知障碍(HANDs)仍然是一个值得关注的问题。国际HANDs诊断指南推荐的神经心理学评估可能需要大量资源。简短的筛查工具,如国际艾滋病毒痴呆量表(IHDS)和蒙特利尔认知评估(MoCA),对于促进初步评估至关重要。本研究旨在评估意大利IHDS (IHDS- it)检测HIV患者认知功能障碍的敏感性和特异性。方法:这项横断面研究包括294例年龄≥30岁的患者,在卡利亚里大学免疫学部门进行评估。使用MoCA和IHDS评估认知功能。还收集了实验室参数,如CD4最低点、当前CD4计数和HIV-RNA水平。统计分析包括Spearman相关、受试者工作特征分析和Youden J统计,以确定认知障碍检测的最佳ihd - it截止值。结果:IHDS与MoCA评分呈中度正相关(Spearman’s rho = 0.411, p < 0.0001)。ROC分析确定ihd - it截止值≤9,曲线下面积(AUC)为0.76,敏感性为71.7%,特异性为67.2%。在这个阈值下,73.1%的MoCA评分低于23的患者也出现了异常的IHDS评分,突出了两种认知评估工具的互补效用。结论:ihd - it在拦截认知障碍方面表现出相当的诊断准确性,其最佳临界值低于先前报道。观察到的差异可能反映了该研究队列的人口统计学和临床特征,包括高龄和长期HIV感染。此外,有必要进行纵向研究来验证这些发现,并在较长时期内确认拟议的IHDS截止值。
{"title":"Cognitive Screening with the Italian International HIV Dementia Scale in People Living with HIV: A Cross-Sectional Study in the cART Era.","authors":"Maristella Belfiori, Francesco Salis, Sergio Angioni, Claudia Bonalumi, Diva Cabeccia, Camilla Onnis, Nicola Pirisi, Francesco Ortu, Paola Piano, Stefano Del Giacco, Antonella Mandas","doi":"10.3390/idr17040095","DOIUrl":"10.3390/idr17040095","url":null,"abstract":"<p><p><b>Background</b>: HIV-associated neurocognitive disorders (HANDs) continue to be a significant concern, despite the advancements in prognosis achieved through Combination Antiretroviral Therapy (cART). Neuropsychological assessment, recommended by international guidelines for HANDs diagnosis, can be resource-intensive. Brief screening tools, like the International HIV Dementia Scale (IHDS) and the Montreal Cognitive Assessment (MoCA), are crucial in facilitating initial evaluations. This study aims to assess the Italian IHDS (IHDS-IT) and evaluate its sensitivity and specificity in detecting cognitive impairment in HIV patients. <b>Methods</b>: This cross-sectional study involved 294 patients aged ≥30 years, evaluated at the Immunology Unit of the University of Cagliari. Cognitive function was assessed using the MoCA and IHDS. Laboratory parameters, such as CD4 nadir, current CD4 count, and HIV-RNA levels, were also collected. Statistical analyses included Spearman's correlation, Receiver Operating Characteristic analysis, and the Youden J statistic to identify the optimal IHDS-IT cut-off for cognitive impairment detection. <b>Results</b>: The IHDS and MoCA scores showed a moderate positive correlation (Spearman's rho = 0.411, <i>p</i> < 0.0001). ROC analysis identified an IHDS-IT cut-off of ≤9, yielding an Area Under the Curve (AUC) of 0.76, sensitivity of 71.7%, and specificity of 67.2%. At this threshold, 73.1% of patients with MoCA scores below 23 also presented abnormal IHDS scores, highlighting the complementary utility of both cognitive assessment instruments. <b>Conclusions</b>: The IHDS-IT exhibited fair diagnostic accuracy for intercepting cognitive impairment, with a lower optimal cut-off than previously reported. The observed differences may reflect this study cohort's demographic and clinical characteristics, including advanced age and long-lasting HIV infection. Further, longitudinal studies are necessary to validate these findings and to confirm the proposed IHDS cut-off over extended periods.</p>","PeriodicalId":13579,"journal":{"name":"Infectious Disease Reports","volume":"17 4","pages":""},"PeriodicalIF":2.4,"publicationDate":"2025-08-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12386600/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144952685","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Biocide Tolerance, Biofilm Formation, and Efflux Pump Activity in Clinical Isolates of Trichosporon asahii. 临床分离朝日三磷虫的杀菌剂耐受性、生物膜形成和外排泵活性。
IF 2.4 Q2 INFECTIOUS DISEASES Pub Date : 2025-08-06 DOI: 10.3390/idr17040097
Yasmim Passos Lima, Jamile de Paiva Macedo, Alessandra Barbosa Ferreira Machado, Cláudio Galuppo Diniz, Vania Lucia da Silva, Vanessa Cordeiro Dias

Background: Trichosporon spp. are opportunistic fungi, capable of causing infection, especially in critically ill individuals who often use broad-spectrum antibiotics, invasive devices, and have comorbidities. Objectives The aim of this study was to analyze individuals' clinical characteristics, evaluate tolerance to biocides, as well as biofilm formation and efflux pump activity in isolates of Trichosporon asahii.

Methods: Clinical isolates of T. asahii collected between 2020 and 2023 from both hospitalized and non-hospitalized individuals, of both sexes, regardless of age, were tested for tolerance to sodium hypochlorite, hydrogen peroxide, benzalkonium chloride, and ethyl alcohol. Efflux pump activity was also assessed using ethidium bromide, and biofilm formation was measured with the Safranin test. Clinical parameters such as outcomes, source, and length of hospitalization were analyzed through electronic medical records.

Results: A total of 37 clinical isolates of T. asahii were identified. Thirty-three (83.8%) isolates were from hospitalized individuals, with 81.82% collected in ICUs, an average hospital stay of 35 days, and a mortality rate of 51.6%. The tested strains displayed the largest mean inhibition zone for 2% sodium hypochlorite, indicating lower tolerance. A high level of efflux pump expression was detected among clinical isolates. Biofilm formation was detected in 25/67.5% of the isolates.

Conclusions: These findings highlight the clinical relevance of T. asahii, particularly in critically ill individuals, and underscore the pathogen's ability to tolerate biocides, express efflux pumps, and form biofilms, all of which may contribute to its persistence and pathogenicity in hospital environments. Enhanced surveillance and effective microbial control measures are essential to mitigate the risks associated with T. asahii infections.

背景:Trichosporon是一种机会性真菌,能够引起感染,特别是在经常使用广谱抗生素、侵入性器械和有合并症的危重患者中。目的分析朝日毛磷虫的个体临床特征,评价其对杀菌剂的耐受性,以及生物膜的形成和外排泵的活性。方法:从2020年至2023年住院和非住院个体中采集的临床分离的asahi T.,不分性别,不分年龄,检测对次氯酸钠、过氧化氢、苯扎氯铵和乙醇的耐受性。用溴化乙锭评估外排泵的活性,用红花素试验测量生物膜的形成。通过电子病历分析临床参数,如结局、来源和住院时间。结果:共分离到37株朝日弓形虫临床分离株。分离株33株(83.8%)来自住院个体,其中81.82%来自icu,平均住院时间为35 d,死亡率为51.6%。受试菌株对2%次氯酸钠的平均抑制范围最大,表明其耐受性较低。在临床分离株中检测到高水平的外排泵表达。在25/67.5%的分离菌中检测到生物膜形成。结论:这些发现强调了朝日肠杆菌的临床相关性,特别是在危重患者中,并强调了病原体耐受杀菌剂、表达外排泵和形成生物膜的能力,所有这些都可能有助于其在医院环境中的持久性和致病性。加强监测和有效的微生物控制措施对于减轻与朝日肠杆菌感染相关的风险至关重要。
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引用次数: 0
Detection of Microorganisms Causing Human Respiratory Infection Using One-Tube Multiplex PCR. 单管多重PCR检测人呼吸道感染微生物。
IF 2.4 Q2 INFECTIOUS DISEASES Pub Date : 2025-08-04 DOI: 10.3390/idr17040093
Isabela L Lima, Adriana F Neves, Robson J Oliveira-Júnior, Lorrayne C M G Honório, Vitória O Arruda, Juliana A São Julião, Luiz Ricardo Goulart Filho, Vivian Alonso-Goulart

Background/Objectives: Due to the significant overlap in symptoms between COVID-19 and other respiratory infections, a multiplex PCR-based platform was developed to simultaneously detect 22 respiratory pathogens. Target sequences were retrieved from the GenBank database and aligned using Clustal Omega 2.1 to identify conserved regions prioritized for primer design. Primers were designed using Primer Express® 3.0.1 and evaluated in Primer Explorer to ensure specificity and minimize secondary structures. A multiplex strategy organized primers into three groups, each labeled with distinct fluorophores (FAM, VIC, or NED), allowing for detection by conventional PCR or capillary electrophoresis (CE). Methods: After reverse transcription for RNA targets, amplification was performed in a single-tube reaction. A total of 340 clinical samples-nasopharyngeal and saliva swabs-were collected from patients, during the COVID-19 pandemic period. The automated analysis of electropherograms enabled precise pathogen identification. Results: Of the samples analyzed, 57.1% tested negative for all pathogens. SARS-CoV-2 was the most frequently detected pathogen (29%), followed by enterovirus (6.5%). Positive results were detected in both nasopharyngeal and saliva swabs, with SARS-CoV-2 predominating in saliva samples. Conclusions: This single-tube multiplex PCR-CE assay represents a cost-effective and robust approach for comprehensive respiratory pathogen detection. It enables rapid and simultaneous diagnosis, facilitating targeted treatment strategies and improved patient outcomes.

背景/目的:由于COVID-19与其他呼吸道感染的症状有明显的重叠,因此建立了一个基于多重pcr的平台,同时检测22种呼吸道病原体。从GenBank数据库中检索目标序列,并使用Clustal Omega 2.1进行比对,确定优先用于引物设计的保守区域。引物使用Primer Express®3.0.1设计,并在Primer Explorer中评估,以确保特异性和最小化二级结构。多重策略将引物分为三组,每组标记有不同的荧光团(FAM, VIC或NED),允许通过常规PCR或毛细管电泳(CE)进行检测。方法:RNA靶点逆转录后,单管反应扩增。在2019冠状病毒病大流行期间,共收集了340份临床样本(鼻咽和唾液拭子)。电泳图的自动分析使病原体的精确鉴定成为可能。结果:在所分析的样本中,所有病原体的检测结果为阴性的占57.1%。SARS-CoV-2是最常见的病原体(29%),其次是肠道病毒(6.5%)。鼻咽拭子和唾液拭子均呈阳性,唾液样本中以SARS-CoV-2为主。结论:单管多重PCR-CE检测是一种经济有效的呼吸道病原体综合检测方法。它可以实现快速和同步诊断,促进有针对性的治疗策略并改善患者的预后。
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引用次数: 0
The First Schaalia (Formerly Actinomyces) Canis-Related Osteomyelitis Requiring Surgical Intervention. 首例需要手术治疗的沙利亚(原放线菌)犬类相关骨髓炎。
IF 2.4 Q2 INFECTIOUS DISEASES Pub Date : 2025-08-04 DOI: 10.3390/idr17040094
Patrick Nugraha, Tzong-Yang Pan, Paul Di Giovine, Nigel Mann, William Murphy

Schaalia canis is a Gram-positive, facultatively anaerobic, rod-shaped bacterium originally isolated from the mucosa and skin of dogs. While it is a part of the normal canine oral flora, it has rarely been implicated in human disease, with only one prior case of cellulitis reported following a dog bite. Case Presentation: We present the case of a 57-year-old immunocompetent man who developed osteomyelitis of the left index finger following a delayed presentation after a dog bite. Despite initial conservative management with empirical oral antibiotics, the infection progressed, eventually requiring surgical debridement and the terminalisation of the finger at the proximal interphalangeal joint. Cultures from intraoperative bone specimens yielded the growth of Schaalia canis, with no other pathogenic organisms identified on the extended culture. Conclusions: This is the first documented case of Schaalia canis-associated osteomyelitis in a human and the first to necessitate a surgical intervention, expanding the known clinical spectrum of this organism. This case underscores the risks of delayed intervention in polymicrobial animal bite wounds and highlights the emerging role of Schaalia species as opportunistic zoonotic pathogens, particularly in the setting of deep, refractory infections.

犬Schaalia是一种革兰氏阳性,兼性厌氧,棒状细菌,最初从狗的粘膜和皮肤中分离出来。虽然它是正常犬口腔菌群的一部分,但它很少与人类疾病有关,只有一个先前的蜂窝织炎病例报告了狗咬伤。病例介绍:我们提出的情况下,一个57岁的免疫功能正常的人谁发展了骨髓炎的左食指后延迟呈现后,狗咬。尽管最初使用经验性口服抗生素进行保守治疗,但感染仍在进展,最终需要手术清创并在近端指间关节处终止手指。术中骨标本的培养产生犬沙利亚菌的生长,在扩展培养中未发现其他病原生物。结论:这是首例记录在案的人类沙利亚犬相关骨髓炎病例,也是首例需要手术干预的病例,扩大了该生物已知的临床范围。该病例强调了延迟干预多微生物动物咬伤的风险,并突出了沙利亚种作为机会性人畜共患病原体的新作用,特别是在深部难治性感染的情况下。
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引用次数: 0
Antifungal Agents in the 21st Century: Advances, Challenges, and Future Perspectives. 21世纪的抗真菌药物:进展、挑战和未来展望。
IF 2.4 Q2 INFECTIOUS DISEASES Pub Date : 2025-08-01 DOI: 10.3390/idr17040091
Francesco Branda, Nicola Petrosillo, Giancarlo Ceccarelli, Marta Giovanetti, Andrea De Vito, Giordano Madeddu, Fabio Scarpa, Massimo Ciccozzi

Invasive fungal infections (IFIs) represent a growing global health threat, particularly for immunocompromised populations, with mortality exceeding 1.5 million deaths annually. Despite their clinical and economic burden-costing billions in healthcare expenditures-fungal infections remain underprioritized in public health agendas. This review examines the current landscape of antifungal therapy, focusing on advances, challenges, and future directions. Key drug classes (polyenes, azoles, echinocandins, and novel agents) are analyzed for their mechanisms of action, pharmacokinetics, and clinical applications, alongside emerging resistance patterns in pathogens like Candida auris and azole-resistant Aspergillus fumigatus. The rise of resistance, driven by agricultural fungicide use and nosocomial transmission, underscores the need for innovative antifungals, rapid diagnostics, and stewardship programs. Promising developments include next-generation echinocandins (e.g., rezafungin), triterpenoids (ibrexafungerp), and orotomides (olorofim), which target resistant strains and offer improved safety profiles. The review also highlights the critical role of "One Health" strategies to mitigate environmental and clinical resistance. Future success hinges on multidisciplinary collaboration, enhanced surveillance, and accelerated drug development to address unmet needs in antifungal therapy.

侵袭性真菌感染是日益严重的全球健康威胁,特别是对免疫功能低下的人群而言,每年死亡人数超过150万人。尽管真菌感染造成了临床和经济负担(医疗保健支出高达数十亿美元),但在公共卫生议程中仍未得到重视。本文综述了抗真菌治疗的现状,重点介绍了进展、挑战和未来方向。主要的药物类别(多烯类、唑类、棘白菌素和新型药物)分析了它们的作用机制、药代动力学和临床应用,以及在金黄色念珠菌和耐唑烟曲霉等病原体中出现的耐药模式。农业杀菌剂的使用和医院传播推动了耐药性的上升,这凸显了创新抗真菌药物、快速诊断和管理规划的必要性。有希望的发展包括下一代棘白菌素(例如,rezafungin)、三萜(ibrexafungerp)和orotomides (olorofim),它们针对耐药菌株并提供改进的安全性。该审查还强调了“同一个健康”战略在减轻环境和临床耐药性方面的关键作用。未来的成功取决于多学科合作、加强监测和加速药物开发,以解决抗真菌治疗中未满足的需求。
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引用次数: 0
Bedside Risk Scoring for Carbapenem-Resistant Gram-Negative Bacterial Infections in Patients with Hematological Malignancies. 血液恶性肿瘤患者耐碳青霉烯革兰氏阴性细菌感染的床边风险评分
IF 2.4 Q2 INFECTIOUS DISEASES Pub Date : 2025-08-01 DOI: 10.3390/idr17040092
Sare Merve Başağa, Ayşegül Ulu Kılıç, Zeynep Ture, Gökmen Zararsız, Serra İlayda Yerlitaş

Background/objectives: This study aimed to create a 'carbapenem resistance score' with the risk factors of carbapenem-resistant Gram-negative bacterial infections (GNBIs) in patients with hematological malignancies.

Methods: Patients with carbapenem-resistant and susceptible GNBIs were included in this study and compared in terms of risk factors. Three models of "carbapenem resistance risk scores" were created with statistically significant variables.

Results: The study included 154 patients with hospital-acquired GNBIs, of whom 64 had carbapenem-resistant GNBIs and 90 had carbapenem-susceptible GNBIs. Univariate and multivariate analyses identified several statistically significant risk factors for carbapenem resistance, including transfer from another hospital or clinic (p = 0.038), prior use of antibiotics like fluoroquinolones (p = 0.009) and carbapenems (p = 0.001), a history of carbapenem-resistant infection in the last six months (p < 0.001), rectal Klebsiella pneumoniae colonization (p < 0.001), hospitalization for ≥30 days (p = 0.001), and the presence of a urinary catheter (p = 0.002). Notably, the 14-day mortality rate was significantly higher in the carbapenem-resistant group (p < 0.001). Based on these findings, three risk-scoring models were developed. Common factors in all three models were fluoroquinolone use in the last six months, rectal K. pneumoniae colonization, and the presence of a urinary catheter. The fourth variable was transfer from another hospital (Model 1), a history of carbapenem-resistant infection (Model 2), or hospitalization for ≥30 days (Model 3). All models demonstrated strong discriminative power (AUC for Model 1: 0.830, Model 2: 0.826, Model 3: 0.831). For all three models, a cutoff value of >2.5 was adopted as the threshold to identify patients at high risk for carbapenem resistance, a value which yielded high positive and negative predictive values.

Conclusions: This study successfully developed three practical risk-scoring models to predict carbapenem resistance in patients with hematological malignancies using common clinical risk factors. A cutoff score of >2.5 proved to be a reliable threshold for identifying high-risk patients across all models, providing clinicians with a valuable tool to guide appropriate empirical antibiotic therapy.

背景/目的:本研究旨在建立血液恶性肿瘤患者碳青霉烯耐药革兰氏阴性细菌感染(GNBIs)危险因素的“碳青霉烯耐药评分”。方法:将碳青霉烯耐药和敏感gnbi患者纳入研究,比较危险因素。建立3个“碳青霉烯耐药风险评分”模型,各变量具有统计学意义。结果:本研究纳入154例医院获得性gnbi患者,其中64例为碳青霉烯耐药gnbi, 90例为碳青霉烯敏感gnbi。单因素和多因素分析确定了碳青霉烯耐药的几个具有统计学意义的危险因素,包括从其他医院或诊所转院(p = 0.038)、以前使用过氟喹诺酮类抗生素(p = 0.009)和碳青霉烯类抗生素(p = 0.001)、过去6个月有碳青霉烯耐药感染史(p < 0.001)、直肠肺炎克雷伯菌定菌(p < 0.001)、住院≥30天(p = 0.001)。尿导管的存在(p = 0.002)。值得注意的是,碳青霉烯耐药组的14天死亡率明显更高(p < 0.001)。基于这些发现,开发了三种风险评分模型。所有三种模型的共同因素是过去六个月内使用氟喹诺酮类药物,直肠肺炎克雷伯菌定植和存在尿导管。第四个变量是其他医院转院(模型1)、碳青霉烯耐药感染史(模型2)或住院≥30天(模型3)。所有模型均表现出较强的判别能力(模型1的AUC为0.830,模型2为0.826,模型3为0.831)。三种模型均采用截断值bbbb2.5作为鉴别碳青霉烯类耐药高危患者的阈值,该值具有较高的阳性预测值和阴性预测值。结论:本研究成功建立了三个实用的风险评分模型,利用常见的临床危险因素预测血液恶性肿瘤患者的碳青霉烯耐药。截断分>2.5被证明是识别所有模型中高危患者的可靠阈值,为临床医生指导适当的经验性抗生素治疗提供了有价值的工具。
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引用次数: 0
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Infectious Disease Reports
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