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Risk of infective endocarditis in oncohaematological patients undergoing active treatment with Enterococcus faecalis bloodstream infection: A retrospective multicentre study 接受粪肠球菌血流感染积极治疗的血液肿瘤患者发生感染性心内膜炎的风险:一项回顾性多中心研究
IF 4.6 2区 医学 Q1 INFECTIOUS DISEASES Pub Date : 2026-02-01 Epub Date: 2025-12-26 DOI: 10.1016/j.ijantimicag.2025.107706
Miguel Ángel Consuegra Pérez , Sara Grillo , Alexander Rombauts , María Alba Rivera Martínez , Anna Falcó-Roget , Adaia Albasanz-Puig , Belén Viñado-Pérez , Nuria Fernández-Hidalgo , Laura Camps-Relats , Alba Bergas , Julia Laporte-Amargos , Joaquín López-Contreras , Laura Escolà-Vergé

Objectives

Enterococcus faecalis bloodstream infections (EF-BSIs) are a common cause of infective endocarditis (IE). Recent guidelines consider E. faecalis bacteraemia a major criterion for IE and recommend systematic echocardiographic screening. The objective of this study was to describe the risk of IE in patients with an EF-BSI and an active oncohaematological malignancy.

Methods

We conducted a retrospective multicentre cohort study across three cancer centres in Barcelona, Spain, including all consecutive adults with EF-BSI and active oncohaematological malignancy who had received oncologic treatment within the previous 3 months from January 2014 to December 2023. Patients were identified via microbiology databases. The primary outcome was a diagnosis of definite IE based on European Society of Cardiology criteria. Secondary outcomes included 30-d mortality, 6-month relapse, and cumulative mortality.

Results

A total of 148 patients were included (median age 64.5 y [IQR 57–72]; 53% male). Eighty (54%) patients had a haematological malignancy, and 68 (46%) a solid tumour. Prosthetic heart valves were present in 4 (3%) patients. Most common BSI sources were primary (39, 26%), urinary tract (36, 24%), abdominal or biliary tract (36, 24%), and central venous catheter-related infections (33, 22%). Echocardiography was performed in 22 patients (15%), with only 2 (1%) diagnosed with definite IE: one had a prosthetic valve, and both had persistent bacteraemia. The 30-d mortality rate was 29% and the 6-month cumulative mortality was 55%. Six patients (7%) experienced relapse, with no new IE diagnoses.

Conclusions

Systematic IE screening may not be warranted in this population and should instead be individualised on the basis of clinical risk factors.
目的:粪肠球菌血流感染(ef - bsi)是感染性心内膜炎(IE)的常见原因。最近的指南认为粪肠杆菌菌血症是IE的主要标准,并推荐系统超声心动图筛查。本研究的目的是描述EF-BSI和活动性血液肿瘤恶性肿瘤患者发生IE的风险。方法:我们在西班牙巴塞罗那的三个癌症中心进行了一项回顾性多中心队列研究,包括所有在2014年1月至2023年12月的前三个月内接受过肿瘤治疗的EF-BSI和活动性血液肿瘤恶性肿瘤患者。通过微生物数据库对患者进行鉴定。主要结果是根据欧洲心脏病学会的标准诊断出明确的IE。次要结局包括30天死亡率、6个月复发率和累积死亡率。结果:共纳入148例患者(中位年龄64.5岁[IQR 57-72],男性占53%)。80例(54%)患者有血液学恶性肿瘤,68例(46%)有实体瘤。4例(3%)患者使用人工心脏瓣膜。最常见的BSI来源是原发性(39.26%)、泌尿道(36.24%)、腹部或胆道(36.24%)和中心静脉导管相关感染(33.22%)。22例(15%)患者进行了超声心动图检查,其中只有2例(1%)确诊为明确的IE: 1例有人工瓣膜,2例均为持续性菌血症。30天死亡率为29%,6个月累积死亡率为55%。6名患者(7%)复发,没有新的IE诊断。结论:在这一人群中,系统的IE筛查可能不合理,而应根据临床风险因素进行个体化筛查。
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引用次数: 0
Ceftazidime/avibactam and ceftolozane/tazobactam for severe paediatric infections: A systematic review, meta-analysis, and evidence map 头孢他啶/阿维巴坦和头孢托氮/他唑巴坦治疗严重儿科感染:系统评价、meta分析和证据图。
IF 4.6 2区 医学 Q1 INFECTIOUS DISEASES Pub Date : 2026-02-01 Epub Date: 2026-01-03 DOI: 10.1016/j.ijantimicag.2025.107710
Paula Pimenta-de-Souza , Alice Ramos-Silva , Valcieny Sandes , Patrícia Portella , Thaís Gouvêa , Fernando Fernandez-Llimos , Elisangela Costa Lima

Background

The growing prevalence of multidrug-resistant Gram-negative bacilli poses major challenges to the management of severe paediatric infections. Ceftazidime/avibactam (CZA) and ceftolozane/tazobactam (C/T) are newer β-lactam/β-lactamase inhibitor combinations with established efficacy in adults.

Objective

To synthesize current evidence on the efficacy, effectiveness, and safety of CZA and C/T in hospitalized children with severe infections.

Methods

We conducted a systematic review, meta-analysis, and evidence map (PROSPERO CRD420251025715). Searches were performed in PubMed, Scopus, CENTRAL, Epistemonikos, LILACS, SciELO, and Web of Science. Eligible designs included randomized controlled trials (RCTs), cohort studies, case series, and case reports evaluating CZA or C/T for complicated intra-abdominal infections, complicated urinary tract infections (cUTI), pneumonia, or bacteraemia in patients aged 0–18 y. The primary outcome was 30-d mortality; secondary outcomes were clinical and microbiological cure and adverse events.

Results

Nineteen studies (4 RCTs, 9 case series, 6 case reports) involving 472 patients were included. Sixteen studies evaluated CZA and three evaluated C/T. All RCTs were phase II, industry-sponsored, and excluded critically ill children and carbapenem-resistant infections. According to the updated RoB 2 assessment, two trials had overall low risk of bias, and two presented some concerns, mainly related to missing outcome data. No deaths occurred in RCTs, whereas observational studies reported 8% mortality. Clinical and microbiological cure exceeded 80% across study designs. Adverse events were generally infrequent; neonatal events clustered in case series, but evidence was insufficient for statistical comparison across age groups. Certainty of evidence ranged from moderate (cUTI with susceptible pathogens) to very low (pneumonia and resistant infections).

Conclusions

CZA and C/T appear promising for paediatric cUTI and complicated intra-abdominal infections, but the evidence base remains narrow and largely dependent on small, industry-funded trials. Independent RCTs including critically ill children and resistant infections are urgently needed.
背景:耐多药革兰氏阴性杆菌(MDR-GNB)的日益流行给严重儿科感染的管理带来了重大挑战。头孢他啶/阿维巴坦(CZA)和头孢甲苯/他唑巴坦(C/T)是较新的β-内酰胺/β-内酰胺酶抑制剂组合,在成人中具有确定的疗效。目的:综合目前关于CZA和C/T治疗住院重症感染患儿的疗效、有效性和安全性的证据。方法:我们进行了系统评价、荟萃分析和证据图(PROSPERO CRD420251025715)。在PubMed、Scopus、CENTRAL、Epistemonikos、LILACS、SciELO和Web of Science中进行了搜索。符合条件的设计包括随机对照试验(RCTs)、队列研究、病例系列和病例报告,评估0-18岁患者的CZA或C/T治疗复杂性腹腔感染(cIAI)、复杂性尿路感染(cUTI)、肺炎或菌血症。主要结局为30天死亡率;次要结局是临床和微生物治愈和不良事件。结果:共纳入19项研究(4项随机对照试验,9个病例系列,6个病例报告),涉及472例患者。16项研究评估CZA, 3项研究评估C/T。所有随机对照试验均为II期,由行业赞助,并排除了危重儿童和碳青霉烯耐药感染。根据最新的RoB 2评估,两项试验总体偏倚风险较低,两项试验存在一些担忧,主要与缺少结局数据有关。随机对照试验中未发生死亡,而观察性研究报告死亡率为8%。临床和微生物治愈率超过80%。不良事件通常不常见;新生儿事件聚集在病例系列中,但证据不足,无法进行年龄组间的统计比较。证据的确定性范围从中等(有易感病原体的cUTI)到非常低(肺炎和耐药感染)。结论:CZA和C/T治疗儿科cUTI和cIAI似乎很有希望,但证据基础仍然狭窄,主要依赖于行业资助的小型试验。迫切需要独立的随机对照试验,包括危重儿童和耐药感染。
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引用次数: 0
Title Page & Editorial Board 标题页和编辑委员会
IF 4.6 2区 医学 Q1 INFECTIOUS DISEASES Pub Date : 2026-02-01 Epub Date: 2026-02-13 DOI: 10.1016/S0924-8579(26)00016-6
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引用次数: 0
Vancomycin clearance compared to creatinine clearance by timed urine collection in the intensive care unit 万古霉素清除率与肌酸酐清除率在重症监护病房定时收集尿液的比较。
IF 4.6 2区 医学 Q1 INFECTIOUS DISEASES Pub Date : 2026-02-01 Epub Date: 2025-12-26 DOI: 10.1016/j.ijantimicag.2025.107704
Andrew Chantha Hean , Rinoj Mathew , Frank Chu , Linda Awdishu

Objective

Prior literature elucidating the ratio of vancomycin clearance by the kidneys to creatinine clearance is conflicting. Further studies are warranted evaluating vancomycin clearance, especially in the critically ill population.

Methods

This retrospective exploratory analysis includes data from a decade of pulmonary/medical or cardiac ICU admissions where a serum creatinine, vancomycin concentration, and 24-hour timed urine collection were obtained within a 72-hour period. Patients with dialysis prior to, or 48 hours after, urine collection were excluded. The primary outcome was the ratio of vancomycin clearance (CLv) to creatinine clearance measured by timed urine collection (mCLcr). Exploratory outcomes also included (1) P30 accuracy and bias of CLv, BSA adjusted 2021 CKD-Epidemiology Collaboration (EPI) creatinine eGFR, Jelliffe creatinine clearance, and Cockcroft-Gault creatinine clearance equations when compared to mCLcr; (2) the correlations of clearances to mCLcr; and (3) the number of patients with augmented renal clearance for each kidney function estimating equation.

Results

A total of 56 eligible subjects were analysed. The ratio of CLv to mCLcr was 0.64. Although CLv showed the lowest P30 accuracy, it was the most correlated with mCLcr along with the 2021 CKD-EPI creatinine eGFR to mCLcr.

Conclusions

In critically ill patients who warrant medical, pulmonary, or cardiac ICU admission, the ratio of total vancomycin clearance to mCLcr measured by timed urine collection may differ from other populations. CLv and the 2021 CKD-EPI creatinine equation may be more correlated to mCLcr by timed urine collection. Larger studies are needed to confirm these results.
先前的文献阐明万古霉素清除率与肌酐清除率的比例是相互矛盾的。进一步的研究评估万古霉素的清除率是必要的,特别是在危重患者人群中。方法:本回顾性探索性分析包括十年来肺部/内科或心脏重症监护病房入院患者的数据,其中在72小时内获得血清肌酐、万古霉素浓度和24小时定时尿液收集。在收集尿液前或48小时后进行透析的患者被排除在外。主要终点是万古霉素清除率(CLv)与肌酐清除率的比值,通过定时尿液收集(mCLcr)测量。探索性结果还包括:(1)与mCLcr相比,CLv的P30准确性和偏倚、体表面积调整后的2021 CKD-EPI肌酐估计肾小球滤过率(eGFR)、Jelliffe肌酐清除率和Cockcroft-Gault肌酐清除率方程的P30准确性和偏倚;(2)清除率与mCLcr的相关性;(3)每个肾功能估计方程中肾脏清除率增强的患者数量。结果:分析了56例符合条件的受试者。CLv与mCLcr之比为0.64。尽管CLv显示最低的P30准确性,但它与mCLcr以及2021 CKD-EPI肌酐eGFR与mCLcr的相关性最大。结论:在需要内科、肺部或心脏ICU住院的危重患者中,通过定时收集尿液测量的万古霉素总清除率与mccr的比值可能与其他人群不同。CLv和2021 CKD-EPI肌酐方程可能通过定时尿液收集与mCLcr更相关。需要更大规模的研究来证实这些结果。
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引用次数: 0
EnvZ mutation–driven downregulation of catecholate siderophore receptors and concurrent TonB complex repression confer cefiderocol resistance in a KPC-producing ST11-KL64 hypervirulent Klebsiella pneumoniae EnvZ突变驱动的儿茶酚酸铁载体受体下调和同时的TonB复合体抑制赋予产kpc的ST11-KL64高致病性肺炎克雷伯菌头孢地罗耐药。
IF 4.6 2区 医学 Q1 INFECTIOUS DISEASES Pub Date : 2026-02-01 Epub Date: 2025-12-18 DOI: 10.1016/j.ijantimicag.2025.107693
Danni Pu , Xianxia Zhuo , Rongrong Song , Chunhui Wang , Jiankang Zhao , Bin Cao

Objectives

Cefiderocol is an ultimate antibiotic option for Carbapenem-resistant hypervirulent Klebsiella pneumoniae (CR-hvKP). While resistance often involves metallo-β-lactamases, mechanisms in KPC-producing strains are unclear. This study aimed to elucidate novel cefiderocol resistance mechanisms in a clinical KPC-producing ST11-KL64 CR-hvKP isolate.

Methods

Cefiderocol-resistant mutants were generated through in vitro experimental evolution. Resistance-associated mutations were identified by whole-genome sequencing. Transcriptomic and proteomic analyses were performed to characterize global regulatory changes and were validated by qRT-PCR and targeted genetic manipulation. Additional tests examined siderophore production, intracellular iron levels, bacterial fitness, oxidative stress tolerance, and macrophage survival.

Results

All high-level cefiderocol-resistant mutants acquired a gain-of-function mutation in the sensor kinase EnvZ (V145G). Integrated transcriptomic and proteomic analyses showed that the envZ mutation drove marked downregulation of catecholate siderophore receptors (cirA and fepA), impairing cefiderocol uptake. In parallel, the TonB–ExbB–ExbD energy transduction complex was independently and stably downregulated, synergistically contributing to resistance. Notably, envZ mutation–associated repression of the enterobactin biosynthesis gene entB paradoxically increased cefiderocol susceptibility, indicating a regulatory trade-off. Resistant mutants exhibited reduced siderophore production, impaired intracellular iron accumulation, and significant fitness costs, including attenuated growth, reduced oxidative stress tolerance, and decreased survival within macrophages.

Conclusions

In conclusion, this work uncovers a novel cefiderocol resistance mechanism in KPC-producing ST11-KL64 CR-hvKp, initiated by the envZ mutation, which causes the downregulation of catecholate siderophore receptors. This receptor repression, combined with the stable downregulation of the TonB-ExbB-ExbD energy complex, severely impairs cefiderocol's “Trojan horse” active uptake. This resistance mechanism is accompanied by a fitness trade-off, providing critical insights into the evolution of these superbugs.
头孢地罗是抗碳青霉烯高致病性肺炎克雷伯菌(CR-hvKP)的最终抗生素选择。虽然耐药性通常涉及金属β-内酰胺酶,但产生kpc的菌株的机制尚不清楚。本研究利用体外进化和多组学分析研究了临床产kpc的ST11-KL64 CR-hvKp的新型头孢地罗耐药机制。高水平头孢醚耐药突变体在双组分系统传感器激酶envZ (V145G)中都获得了功能获得突变。转录组-蛋白质组分析、qRT-PCR和基因操作显示,envZ突变主要驱动儿茶酚酸铁载体受体(cirA, fepA)的下调,从而损害头孢地酚的进入。这种作用与TonB-ExbB-ExbD能量复合物的独立下调相结合,协同赋予头孢地罗耐药性。有趣的是,共同发生的envZ突变驱动肠杆菌素生物合成基因(entB)的下调增加了头孢地罗的易感性,这表明一个复杂的调节权衡。功能分析证实,抗性突变体表现出铁载体产生减少和细胞内铁积累受损。然而,这种新的耐药机制产生了巨大的适应性代价,包括巨噬细胞生长受损、氧化应激耐受性降低和存活时间缩短。总之,这项工作揭示了kpc产生ST11-KL64 CR-hvKp的一种新的cefiderocol耐药机制,该机制由envZ突变启动,导致儿茶酚酸铁载体受体下调。这种受体抑制,加上TonB-ExbB-ExbD能量复合物的稳定下调,严重损害了头孢地罗的“特洛伊木马”主动摄取。这种抗性机制伴随着适应性的权衡,为这些超级细菌的进化提供了重要的见解。
{"title":"EnvZ mutation–driven downregulation of catecholate siderophore receptors and concurrent TonB complex repression confer cefiderocol resistance in a KPC-producing ST11-KL64 hypervirulent Klebsiella pneumoniae","authors":"Danni Pu ,&nbsp;Xianxia Zhuo ,&nbsp;Rongrong Song ,&nbsp;Chunhui Wang ,&nbsp;Jiankang Zhao ,&nbsp;Bin Cao","doi":"10.1016/j.ijantimicag.2025.107693","DOIUrl":"10.1016/j.ijantimicag.2025.107693","url":null,"abstract":"<div><h3>Objectives</h3><div>Cefiderocol is an ultimate antibiotic option for Carbapenem-resistant hypervirulent <em>Klebsiella pneumoniae</em> (CR-hvKP). While resistance often involves metallo-β-lactamases, mechanisms in KPC-producing strains are unclear. This study aimed to elucidate novel cefiderocol resistance mechanisms in a clinical KPC-producing ST11-KL64 CR-hvKP isolate.</div></div><div><h3>Methods</h3><div>Cefiderocol-resistant mutants were generated through <em>in vitro</em> experimental evolution. Resistance-associated mutations were identified by whole-genome sequencing. Transcriptomic and proteomic analyses were performed to characterize global regulatory changes and were validated by qRT-PCR and targeted genetic manipulation. Additional tests examined siderophore production, intracellular iron levels, bacterial fitness, oxidative stress tolerance, and macrophage survival.</div></div><div><h3>Results</h3><div>All high-level cefiderocol-resistant mutants acquired a gain-of-function mutation in the sensor kinase EnvZ (V145G). Integrated transcriptomic and proteomic analyses showed that the <em>envZ</em> mutation drove marked downregulation of catecholate siderophore receptors (<em>cirA</em> and <em>fepA</em>), impairing cefiderocol uptake. In parallel, the TonB–ExbB–ExbD energy transduction complex was independently and stably downregulated, synergistically contributing to resistance. Notably, <em>envZ</em> mutation–associated repression of the enterobactin biosynthesis gene <em>entB</em> paradoxically increased cefiderocol susceptibility, indicating a regulatory trade-off. Resistant mutants exhibited reduced siderophore production, impaired intracellular iron accumulation, and significant fitness costs, including attenuated growth, reduced oxidative stress tolerance, and decreased survival within macrophages.</div></div><div><h3>Conclusions</h3><div>In conclusion, this work uncovers a novel cefiderocol resistance mechanism in KPC-producing ST11-KL64 CR-hvKp, initiated by the <em>envZ</em> mutation, which causes the downregulation of catecholate siderophore receptors. This receptor repression, combined with the stable downregulation of the TonB-ExbB-ExbD energy complex, severely impairs cefiderocol's “Trojan horse” active uptake. This resistance mechanism is accompanied by a fitness trade-off, providing critical insights into the evolution of these superbugs.</div></div>","PeriodicalId":13818,"journal":{"name":"International Journal of Antimicrobial Agents","volume":"67 2","pages":"Article 107693"},"PeriodicalIF":4.6,"publicationDate":"2026-02-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145800434","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Formation of a novel multiresistance plasmid co-carrying tigecycline, carbapenem, and other resistance genes by recombination during conjugative transfer in Klebsiella pneumoniae 肺炎克雷伯菌结合转移过程中重组共携带替加环素、碳青霉烯等耐药基因的新型多耐药质粒的形成
IF 4.6 2区 医学 Q1 INFECTIOUS DISEASES Pub Date : 2026-02-01 Epub Date: 2025-11-29 DOI: 10.1016/j.ijantimicag.2025.107683
Runhao Yu , Zhong Chen , Stefan Schwarz , Hong Yao , Chenglong Li , Xiang-Dang Du

Objective

Klebsiella pneumoniae is a major global nosocomial pathogen, and strains acquiring extended-spectrum β-lactamase (ESBL) or carbapenemase resistance genes exhibit extensive clinical drug resistance, posing a serious public health threat. This study aimed to characterize the genetic features and transferability of resistance determinants in a clinically isolated multidrug-resistant K. pneumoniae strain.

Methods

A multidrug-resistant K. pneumoniae strain was isolated from clinical samples. Whole-genome sequencing was performed to identify the resistance genes carried by the strain and the transposase sequences within the genetic environment of the target resistance genes. Conjugative transfer experiments were conducted to verify the transferability of the identified resistance genes and their genetic recombination characteristics.

Results

The clinical isolate was confirmed to co-carry a tet(A) variant, tmexCD2-toprJ2, and blaNDM-1 resistance genes. Whole-genome sequencing revealed the presence of IS26, IS3000, and ∆tnpA transposase sequences in the genetic environment of tet(A)v and blaNDM-1 genes. Conjugative transfer experiments verified the transferability of the different resistance genes, and notably, recombination and co-transfer events of tet(A)v and blaNDM-1 genes were detected within the conjugative plasmid of the strain.

Conclusions

Transposases play a crucial role in the formation of complex multidrug-resistant K. pneumoniae strains. The findings of this study provide a novel perspective and critical evidence for elucidating the antimicrobial resistance mechanisms and dissemination pathways of multidrug-resistant K. pneumoniae.
长期以来,肺炎克雷伯菌被认为是全球最常见的医院病原菌之一。肺炎克雷伯菌获得广谱β-内酰胺酶(ESBLs)编码基因或赋予碳青霉烯酶耐药性通常会导致对大多数治疗药物的临床耐药性,从而使感染的控制变得困难。世界卫生组织已将产生esbl的肺炎克雷伯菌和耐碳青霉烯肺炎克雷伯菌(CRKP)列为严重的公共卫生威胁。本研究从临床样本中分离到一株多重耐药肺炎克雷伯菌,该菌株共携带tet(a)变异tet(a)v、tmexCD2-toprJ2和blaNDM-1。全基因组测序结果显示,在tet(A)v和blaNDM-1基因的遗传环境中存在IS26、IS3000和∆tnpA转座酶序列。结合转移实验证实了不同抗性基因的可转移性,令人惊讶的是,在结合质粒内检测到tet(A)v和blaNDM-1基因的重组和共转移。这些发现进一步揭示了转座酶在复杂多药耐药菌株形成中的重要作用,为了解多药耐药肺炎克雷伯菌的耐药机制和传播途径提供了新的视角和关键证据。
{"title":"Formation of a novel multiresistance plasmid co-carrying tigecycline, carbapenem, and other resistance genes by recombination during conjugative transfer in Klebsiella pneumoniae","authors":"Runhao Yu ,&nbsp;Zhong Chen ,&nbsp;Stefan Schwarz ,&nbsp;Hong Yao ,&nbsp;Chenglong Li ,&nbsp;Xiang-Dang Du","doi":"10.1016/j.ijantimicag.2025.107683","DOIUrl":"10.1016/j.ijantimicag.2025.107683","url":null,"abstract":"<div><h3>Objective</h3><div><em>Klebsiella pneumoniae</em> is a major global nosocomial pathogen, and strains acquiring extended-spectrum β-lactamase (ESBL) or carbapenemase resistance genes exhibit extensive clinical drug resistance, posing a serious public health threat. This study aimed to characterize the genetic features and transferability of resistance determinants in a clinically isolated multidrug-resistant <em>K. pneumoniae</em> strain.</div></div><div><h3>Methods</h3><div>A multidrug-resistant <em>K. pneumoniae</em> strain was isolated from clinical samples. Whole-genome sequencing was performed to identify the resistance genes carried by the strain and the transposase sequences within the genetic environment of the target resistance genes. Conjugative transfer experiments were conducted to verify the transferability of the identified resistance genes and their genetic recombination characteristics.</div></div><div><h3>Results</h3><div>The clinical isolate was confirmed to co-carry a <em>tet</em>(A) variant, <em>tmexCD2-toprJ2</em>, and <em>bla</em><sub>NDM-1</sub> resistance genes. Whole-genome sequencing revealed the presence of IS<em>26</em>, IS<em>3000</em>, and ∆<em>tnpA</em> transposase sequences in the genetic environment of <em>tet</em>(A)v and <em>bla</em><sub>NDM-1</sub> genes. Conjugative transfer experiments verified the transferability of the different resistance genes, and notably, recombination and co-transfer events of <em>tet</em>(A)v and <em>bla</em><sub>NDM-1</sub> genes were detected within the conjugative plasmid of the strain.</div></div><div><h3>Conclusions</h3><div>Transposases play a crucial role in the formation of complex multidrug-resistant <em>K. pneumoniae</em> strains. The findings of this study provide a novel perspective and critical evidence for elucidating the antimicrobial resistance mechanisms and dissemination pathways of multidrug-resistant <em>K. pneumoniae</em>.</div></div>","PeriodicalId":13818,"journal":{"name":"International Journal of Antimicrobial Agents","volume":"67 2","pages":"Article 107683"},"PeriodicalIF":4.6,"publicationDate":"2026-02-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145654199","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
ATP-binding cassette transporters mediate and regulate metronidazole resistance in Clostridioides difficile atp结合盒转运体介导和调节艰难梭菌对甲硝唑的抗性。
IF 4.6 2区 医学 Q1 INFECTIOUS DISEASES Pub Date : 2026-02-01 Epub Date: 2026-01-04 DOI: 10.1016/j.ijantimicag.2025.107709
Teng Xu , Ying Zhou , Qingqing Xu , Li Wang , Yu Zhou , Shi Wu , Haihui Huang

Objective

Metronidazole (MTZ) resistance in Clostridioides difficile is associated with decreased efficacy of MTZ. We studied the MTZ-resistant C. difficile strain sh182IR (minimum inhibitory concentration [MIC] = 32 mg/L) to characterize the role of ATP-binding cassette (ABC) family transporters in MTZ resistance in C. difficile. The strain overexpresses ABC multidrug efflux pump components.

Methods

In strain sh182IR, ClosTron mutagenesis was applied to disrupt cd17530, a gene encoding the ABC transporter ATP-binding protein, and the effects on efflux capacity and MIC of MTZ were evaluated. The upstream regulatory gene cd17520 was also sequenced.

Results

Disruption of cd17530 reduced the efflux capacity of fluorescent substrates and MIC of MTZ in C. difficile sh182IR. Repair of cd17530 successfully restored the MTZ MIC and efflux capacity of the strain. We also confirmed that the upstream TetR/AcrR family transcription factor gene cd17520 in sh182IR harbours a frameshift mutation. This mutation resulted in the loss of function of the peptide chain encoded by the gene and upregulation of cd17530-17540-17550.

Conclusions

The frameshift mutation in the transcriptional repressor cd17520, which results in the derepression of the cd17530-17540-17550 operon, contributes to ABC transporter-mediated MTZ resistance in C. difficile.
艰难梭菌对甲硝唑(MTZ)的耐药性与MTZ疗效下降有关。我们研究了艰难梭菌耐MTZ菌株sh182IR (MIC = 32 mg/L),以表征ABC家族转运蛋白在艰难梭菌耐MTZ中的作用。该菌株过表达ABC多药外排泵成分。cd17530(编码ABC转运体atp结合蛋白的基因)的ClosTron突变降低了荧光底物在艰难梭菌sh182IR中的外流能力和MTZ的最低抑制浓度(MIC)。此外,cd17530修复成功地恢复了菌株的MTZ - MIC和外排能力。我们还证实了sh182IR中上游TetR/AcrR家族转录因子基因cd17520存在移码突变。该突变导致该基因编码的肽链功能丧失,cd17530-17540-17550上调,可能部分促成了ABC转运蛋白介导的艰难梭菌MTZ抗性。
{"title":"ATP-binding cassette transporters mediate and regulate metronidazole resistance in Clostridioides difficile","authors":"Teng Xu ,&nbsp;Ying Zhou ,&nbsp;Qingqing Xu ,&nbsp;Li Wang ,&nbsp;Yu Zhou ,&nbsp;Shi Wu ,&nbsp;Haihui Huang","doi":"10.1016/j.ijantimicag.2025.107709","DOIUrl":"10.1016/j.ijantimicag.2025.107709","url":null,"abstract":"<div><h3>Objective</h3><div>Metronidazole (MTZ) resistance in <em>Clostridioides difficile</em> is associated with decreased efficacy of MTZ. We studied the MTZ-resistant <em>C. difficile</em> strain sh182IR (minimum inhibitory concentration [MIC] = 32 mg/L) to characterize the role of ATP-binding cassette (ABC) family transporters in MTZ resistance in <em>C. difficile</em>. The strain overexpresses ABC multidrug efflux pump components.</div></div><div><h3>Methods</h3><div>In strain sh182IR, ClosTron mutagenesis was applied to disrupt <em>cd17530</em>, a gene encoding the ABC transporter ATP-binding protein, and the effects on efflux capacity and MIC of MTZ were evaluated. The upstream regulatory gene <em>cd17520</em> was also sequenced.</div></div><div><h3>Results</h3><div>Disruption of <em>cd17530</em> reduced the efflux capacity of fluorescent substrates and MIC of MTZ in <em>C. difficile</em> sh182IR. Repair of <em>cd17530</em> successfully restored the MTZ MIC and efflux capacity of the strain. We also confirmed that the upstream TetR/AcrR family transcription factor gene <em>cd17520</em> in sh182IR harbours a frameshift mutation. This mutation resulted in the loss of function of the peptide chain encoded by the gene and upregulation of cd17530-17540-17550.</div></div><div><h3>Conclusions</h3><div>The frameshift mutation in the transcriptional repressor <em>cd17520</em>, which results in the derepression of the cd17530-17540-17550 operon, contributes to ABC transporter-mediated MTZ resistance in <em>C. difficile</em>.</div></div>","PeriodicalId":13818,"journal":{"name":"International Journal of Antimicrobial Agents","volume":"67 2","pages":"Article 107709"},"PeriodicalIF":4.6,"publicationDate":"2026-02-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145905677","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Antibiotic class comparisons for the treatment of pyelonephritis and complicated urinary tract infections: A systematic review and meta-analysis 治疗肾盂肾炎和并发尿路感染的抗生素类别比较:系统回顾和荟萃分析。
IF 4.6 2区 医学 Q1 INFECTIOUS DISEASES Pub Date : 2026-02-01 Epub Date: 2025-12-22 DOI: 10.1016/j.ijantimicag.2025.107696
Digbijay Kunwar , Itay Zahavi , Judit Olchowski , Hagar Dallasheh , Mical Paul

Background

The relative efficacy of antibiotic classes for pyelonephritis and complicated UTI (cUTI) remains unclear, as different antibiotic classes vary in antimicrobial activity, pharmacodynamics and pharmacokinetics.

Methods

Systematic review and meta-analysis. We searched PubMed, Cochrane CENTRAL, clinical-trial registries and conference abstracts through 30 November 2025. Randomised controlled trials comparing antibiotic classes in adults with pyelonephritis/complicated UTI (cUTI) were eligible (PROSPERO CRD42023448020). Five comparisons were analysed: quinolones vs β-lactams, cephalosporins vs penicillins, aminoglycosides vs quinolones or beta-lactams, trimethoprim-sulfamethoxazole vs quinolones or beta-lactams and ESBL-active agents vs non-ESBL-active antibiotics. The primary outcome was clinical cure by day 7. We compiled risk ratios (RRs) with 95% confidence intervals (CI) using fixed-effect meta-analyses. Risk of bias was assessed with ROB 2.0 and evidence certainty using GRADE.

Results

Thirty-seven RCTs were included, comprising 7,904 mainly hospitalized participants (62.7% women). Most had some risk-of-bias concerns. No significant difference in clinical cure was observed with moderate evidence certainty, across all comparisons. Relapse increased significantly with TMP/SMX compared to quinolones or beta-lactams (RR 2.34 [1.29, 4.24]) and microbiological cure improved with ESBL-active antibiotics (RR 1.07 [1.02, 1.13], very low certainty evidence). TMP/SMX increased adverse events and aminoglycosides increased nephrotoxicity and resistance acquisition.

Conclusions

Clinical cure was comparable across all comparisons. This supports basing antibiotic selection on local resistance patterns, patient factors and toxicity profiles rather than presumed class superiority.
背景:不同种类的抗生素治疗肾盂肾炎和合并UTI (cUTI)的相对疗效尚不清楚,因为不同种类的抗生素在抗菌活性、药效学和药代动力学方面存在差异。方法:系统评价和荟萃分析。我们检索了PubMed、Cochrane CENTRAL、临床试验注册库和2025年11月30日的会议摘要。比较成人肾盂肾炎/ cUTI患者抗生素种类的随机对照试验符合条件(PROSPERO CRD42023448020)。分析了五种比较:喹诺酮类与β-内酰胺类、头孢菌素类与青霉素类、氨基糖苷类与喹诺酮类或β-内酰胺类、甲氧苄啶磺胺甲恶唑类与喹诺酮类或β-内酰胺类、esbl活性药物与非esbl活性抗生素。主要终点为第7天临床治愈。我们使用固定效应荟萃分析编制了95%置信区间的风险比(rr)。偏倚风险采用rob2.0评估,证据确定性采用GRADE评估。结果:纳入37项随机对照试验,包括7904名主要住院患者(62.7%为女性)。大多数人都有一些偏见风险的担忧。在所有比较中,没有观察到临床治愈的显著差异,证据确定性中等。与喹诺酮类或β -内酰胺类药物相比,TMP/ SMX组的复发率显著增加(RR为2.34 [1.29,4.24]),eslb活性抗生素组的微生物治愈率提高(RR为1.07[1.02,1.13],确定性证据非常低)。TMP/ SMX增加了不良事件,氨基糖苷增加了肾毒性和耐药性获得。结论:临床治愈率在所有比较中具有可比性。这支持根据当地的耐药模式、患者因素和毒性特征来选择抗生素,而不是假设的类别优势。
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引用次数: 0
Regorafenib, a multitargeted kinase inhibitor, inhibits enterovirus 71 infection by suppressing the MAPK pathway Regorafenib是一种多靶点激酶抑制剂,通过抑制MAPK途径抑制肠病毒71感染。
IF 4.6 2区 医学 Q1 INFECTIOUS DISEASES Pub Date : 2026-02-01 Epub Date: 2026-01-03 DOI: 10.1016/j.ijantimicag.2025.107711
Xinyu Zhang , Yuanyuan Cao , Yu Liu , Shengqun Deng , Shilong Lv , Wangping Peng , Lu Fang , Luyao Zhang , Yaling Wu , Li Yu , Baojing Lu , Shenghai Huang , Qi Tang

Objectives

To investigate the in vitro and in vivo antiviral efficacy and underlying mechanism of regorafenib against Enterovirus 71 (EV71), as no licensed direct-acting antivirals are available for severe cases.

Methods

The inhibitory effect of regorafenib against EV71 was evaluated using qRT‒PCR, Western blot, IF, and CPE assays. The stage of the viral life cycle targeted by regorafenib was determined via time-of-addition, binding and entry assays. In vivo efficacy was assessed in an EV71-infected murine model by monitoring body weight, clinical scores, and viral RNA loads in tissues. The mechanism of action was elucidated by analyzing the effect of regorafenib on the MEK/ERK phosphorylation in the host mitogen-activated protein kinase (MAPK) pathway. A potential interaction with the EV71 capsid protein VP1 was investigated using molecular docking.

Results

Regorafenib demonstrated potent, dose-dependent antiviral activity against EV71 in vitro and exhibited broad-spectrum efficacy against multiple human enteroviruses. In an EV71-infected murine model, oral administration of regorafenib at doses of 1.25 or 2.5 mg/kg/day significantly alleviated infection-associated symptoms and reduced viral loads in key organs. Mechanistic investigations revealed that regorafenib suppressed viral replication by inhibiting the phosphorylation of MEK and ERK in the MAPK pathway. Molecular docking studies further predicted that regorafenib binds to the viral capsid protein VP1, providing a potential structural basis for its antiviral effect.

Conclusions

Our findings establish that regorafenib exhibits inhibitory activity against EV71 in vitro and in vivo, which warrants further preclinical evaluation as a candidate lead compound.
肠病毒71 (EV71)是引起手足口病(手足口病)的主要病原体之一,严重威胁幼儿的健康和安全。目前有EV71 C4疫苗;然而,目前还没有针对严重病例的许可直接抗病毒药物。在这项研究中,我们证明regorafenib是一种临床批准的多靶点激酶抑制剂,具有抗癌应用,对EV71具有有效的抗病毒活性,并且对多种人类肠道病毒具有广谱疗效。在ev71感染的小鼠模型中,口服瑞非尼1.25或2.5 mg/kg/天的剂量可显著缓解感染相关症状,并降低关键器官的病毒载量。机制研究表明,reorafenib通过抑制丝裂原活化蛋白激酶(MAPK)通路中MAPK/ERK激酶(MEK)和细胞外信号调节激酶(ERK)的磷酸化来抑制EV71, MAPK是病毒诱导的信号级联反应,对病毒的发病至关重要。此外,分子对接研究预测reorafenib与EV71衣壳蛋白VP1结合,提示其抗病毒机制的潜在结构基础。总之,我们的研究结果表明瑞非尼对EV71具有抑制活性,值得作为候选先导化合物进行进一步的临床前评估。
{"title":"Regorafenib, a multitargeted kinase inhibitor, inhibits enterovirus 71 infection by suppressing the MAPK pathway","authors":"Xinyu Zhang ,&nbsp;Yuanyuan Cao ,&nbsp;Yu Liu ,&nbsp;Shengqun Deng ,&nbsp;Shilong Lv ,&nbsp;Wangping Peng ,&nbsp;Lu Fang ,&nbsp;Luyao Zhang ,&nbsp;Yaling Wu ,&nbsp;Li Yu ,&nbsp;Baojing Lu ,&nbsp;Shenghai Huang ,&nbsp;Qi Tang","doi":"10.1016/j.ijantimicag.2025.107711","DOIUrl":"10.1016/j.ijantimicag.2025.107711","url":null,"abstract":"<div><h3>Objectives</h3><div>To investigate the <em>in vitro</em> and <em>in vivo</em> antiviral efficacy and underlying mechanism of regorafenib against Enterovirus 71 (EV71), as no licensed direct-acting antivirals are available for severe cases.</div></div><div><h3>Methods</h3><div>The inhibitory effect of regorafenib against EV71 was evaluated using qRT‒PCR, Western blot, IF, and CPE assays. The stage of the viral life cycle targeted by regorafenib was determined via time-of-addition, binding and entry assays. <em>In vivo</em> efficacy was assessed in an EV71-infected murine model by monitoring body weight, clinical scores, and viral RNA loads in tissues. The mechanism of action was elucidated by analyzing the effect of regorafenib on the MEK/ERK phosphorylation in the host mitogen-activated protein kinase (MAPK) pathway. A potential interaction with the EV71 capsid protein VP1 was investigated using molecular docking.</div></div><div><h3>Results</h3><div>Regorafenib demonstrated potent, dose-dependent antiviral activity against EV71 <em>in vitro</em> and exhibited broad-spectrum efficacy against multiple human enteroviruses. In an EV71-infected murine model, oral administration of regorafenib at doses of 1.25 or 2.5 mg/kg/day significantly alleviated infection-associated symptoms and reduced viral loads in key organs. Mechanistic investigations revealed that regorafenib suppressed viral replication by inhibiting the phosphorylation of MEK and ERK in the MAPK pathway. Molecular docking studies further predicted that regorafenib binds to the viral capsid protein VP1, providing a potential structural basis for its antiviral effect.</div></div><div><h3>Conclusions</h3><div>Our findings establish that regorafenib exhibits inhibitory activity against EV71 <em>in vitro</em> and <em>in vivo</em>, which warrants further preclinical evaluation as a candidate lead compound.</div></div>","PeriodicalId":13818,"journal":{"name":"International Journal of Antimicrobial Agents","volume":"67 2","pages":"Article 107711"},"PeriodicalIF":4.6,"publicationDate":"2026-02-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145905623","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Superintegron of Vibrio paracholerae as a reservoir of antibiotic resistance genes 副弧菌作为抗生素抗性基因储存库的超整合子。
IF 4.6 2区 医学 Q1 INFECTIOUS DISEASES Pub Date : 2026-02-01 Epub Date: 2025-12-30 DOI: 10.1016/j.ijantimicag.2025.107708
Sergio Mascarenhas Morgado, Erica Lourenço da Fonseca, Ana Carolina Paulo Vicente
{"title":"Superintegron of Vibrio paracholerae as a reservoir of antibiotic resistance genes","authors":"Sergio Mascarenhas Morgado,&nbsp;Erica Lourenço da Fonseca,&nbsp;Ana Carolina Paulo Vicente","doi":"10.1016/j.ijantimicag.2025.107708","DOIUrl":"10.1016/j.ijantimicag.2025.107708","url":null,"abstract":"","PeriodicalId":13818,"journal":{"name":"International Journal of Antimicrobial Agents","volume":"67 2","pages":"Article 107708"},"PeriodicalIF":4.6,"publicationDate":"2026-02-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145889237","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
期刊
International Journal of Antimicrobial Agents
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