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Evaluation of the Pattern of EPIYA Motifs in the Helicobacter pylori cagA Gene of Patients with Gastritis and Gastric Adenocarcinoma from the Brazilian Amazon Region 巴西亚马逊地区胃炎和胃腺癌患者幽门螺杆菌cagA基因EPIYA基序模式的评价
Pub Date : 2014-04-24 DOI: 10.1155/2014/418063
Adenielson Vilar e Silva, Mario Ribeiro da Silva Junior, Ruth Maria Dias Ferreira Vinagre, Kemper Nunes do Santos, Renata Aparecida Andrade da Costa, A. A. Fecury, J. Quaresma, L. Martins
The Helicobacter pylori is associated with the development of different diseases. The clinical outcome of infection may be associated with the cagA bacterial genotype. The aim of this study was to determine the EPIYA patterns of strains isolated from patients with gastritis and gastric adenocarcinoma and correlate these patterns with the histopathological features. Gastric biopsy samples were selected from 384 patients infected with H. pylori, including 194 with chronic gastritis and 190 with gastric adenocarcinoma. The presence of the cagA gene and the EPIYA motif was determined by PCR. The cagA gene was more prevalent in patients with gastric cancer and was associated with a higher degree of inflammation, neutrophil activity, and development of intestinal metaplasia. The number of EPIYA-C repeats showed a significant association with an increased risk of gastric carcinoma (OR = 3.79, 95% CI = 1.92–7.46, and P = 0.002). A larger number of EPIYA-C motifs were also associated with intestinal metaplasia. In the present study, infection with H. pylori strains harboring more than one EPIYA-C motif in the cagA gene was associated with the development of intestinal metaplasia and gastric adenocarcinoma but not with neutrophil activity or degree of inflammation.
幽门螺杆菌与不同疾病的发展有关。感染的临床结果可能与cagA细菌基因型有关。本研究的目的是确定从胃炎和胃腺癌患者分离的菌株的EPIYA模式,并将这些模式与组织病理学特征联系起来。选取384例幽门螺杆菌感染患者的胃活检标本,其中慢性胃炎194例,胃腺癌190例。PCR检测cagA基因和EPIYA基序的存在。cagA基因在胃癌患者中更为普遍,并与较高程度的炎症、中性粒细胞活性和肠化生的发生有关。EPIYA-C重复数与胃癌风险增加有显著相关性(OR = 3.79, 95% CI = 1.92-7.46, P = 0.002)。大量的EPIYA-C基序也与肠化生有关。在本研究中,在cagA基因中含有一个以上EPIYA-C基序的幽门螺杆菌菌株感染与肠化生和胃腺癌的发生有关,但与中性粒细胞活性或炎症程度无关。
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引用次数: 14
Detection of Q Fever Specific Antibodies Using Recombinant Antigen in ELISA with Peroxidase Based Signal Amplification 基于过氧化物酶信号扩增的重组抗原ELISA检测Q热特异性抗体
Pub Date : 2014-03-12 DOI: 10.1155/2014/707463
Hua-Wei Chen, Zhiwen Zhang, E. Glennon, W. Ching
Currently, the accepted method for Q fever serodiagnosis is indirect immunofluorescent antibody assay (IFA) using the whole cell antigen. In this study, we prepared the recombinant antigen of the 27-kDa outer membrane protein (Com1) which has been shown to be recognized by Q fever patient sera. The performance of recombinant Com1 was evaluated in ELISA by IFA confirmed serum samples. Due to the low titers of IgG and IgM in Q fever patients, the standard ELISA signals were further amplified by using biotinylated anti-human IgG or IgM plus streptavidin-HRP polymer. The modified ELISA can detect 88% (29 out of 33) of Q fever patient sera collected from Marines deployed to Iraq. Less than 5% (5 out of 156) of the sera from patients with other febrile diseases reacted with the Com1. These results suggest that the modified ELISA using Com1 may have the potential to improve the detection of Q fever specific antibodies.
目前公认的Q热血清诊断方法是采用全细胞抗原的间接免疫荧光抗体测定法(IFA)。在本研究中,我们制备了27-kDa外膜蛋白(Com1)的重组抗原,该蛋白已被证实可被Q热患者血清识别。以IFA确认的血清样品,ELISA法评价重组Com1的性能。由于Q热患者IgG和IgM滴度较低,采用生物素化的抗人IgG或IgM加链亲和素- hrp聚合物进一步扩增标准ELISA信号。改良后的酶联免疫吸附试验(ELISA)能检测出88%(33人中29人)的驻伊拉克海军陆战队Q热患者血清。来自其他发热疾病患者的血清中只有不到5%(156例中有5例)与Com1反应。这些结果表明,使用Com1修饰的ELISA可能具有提高Q热特异性抗体检测的潜力。
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引用次数: 8
Changing Trends in Prevalence and Antibiotics Resistance of Uropathogens in Patients Attending the Gondar University Hospital, Northwest Ethiopia 埃塞俄比亚西北部贡达尔大学医院尿路病原菌患病率和抗生素耐药性的变化趋势
Pub Date : 2014-03-10 DOI: 10.1155/2014/629424
M. Tiruneh, Sisay Yifru, Mucheye Gizachew, K. Molla, Yeshambel Belyhun, F. Moges, Mengistu Endris
Background. In most hospitals of developing countries, urinary tract infections are treated empirically because of lack of culture facilities. This leads to emergence of multiresistant uropathogens. Culturing and drug susceptibility testing are essential to guide therapy. Objectives. To assess changing prevalence and resistance pattern of uropathogens to commonly used antibiotics in a two-year study period. Methods. Urine specimens were collected and cultured. Uropathogens were identified by standard methods and tested for antibiotics resistance. Data were analyzed using SPSS version 16 statistical sofware. P value < 0.05 was considered statistically significant. Results. The commonest isolates in both the previous and present studies were E. coli, Klebsiella, CoNS, S. aureus, Proteus, and Citrobacter species. Previous isolates of Enterobacteriaceae were 100% sensitive to ciprofloxacin, whereas present isolates developed 31% to 60% resistance to it. Previous isolates were less resistant to gentamycin than the present ones. Multiresistance isolates were predominant in present study than previous ones. Conclusion. E. coli was predominant in the two study periods. Present isolates were more resistant than previous ones. Some previous isolates were 100% sensitive to ciprofloxacin, whereas present isolates were increasingly resistant. Ciprofloxacin and gentamicin have been recommended for empiric treatment of urinary tract infections.
背景。在发展中国家的大多数医院,由于缺乏培养设施,尿路感染的治疗是经验性的。这导致了多重耐药尿路病原体的出现。培养和药敏试验对指导治疗至关重要。目标。在为期两年的研究期间,评估尿路病原体对常用抗生素的变化患病率和耐药模式。方法。收集尿液标本并进行培养。采用标准方法鉴定尿路病原菌并进行抗生素耐药性检测。数据分析采用SPSS 16版统计软件。P值< 0.05为差异有统计学意义。结果。在过去和现在的研究中,最常见的分离株是大肠杆菌、克雷伯氏菌、con、金黄色葡萄球菌、变形杆菌和柠檬酸杆菌。以前分离的肠杆菌科菌株对环丙沙星的敏感性为100%,而目前分离的菌株对环丙沙星的耐药性为31%至60%。以前的分离株对庆大霉素的耐药性较低。本研究以多耐药菌株为主。结论。大肠杆菌在两个研究阶段均占优势。目前的分离株比以前的更耐药。以前的一些分离株对环丙沙星100%敏感,而现在的分离株越来越耐药。环丙沙星和庆大霉素已被推荐用于尿路感染的经验性治疗。
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引用次数: 25
In Vitro Screening for Abiotic Stress Tolerance in Potent Biocontrol and Plant Growth Promoting Strains of Pseudomonas and Bacillus spp. 假单胞菌和芽孢杆菌强效生防促株非生物抗性的体外筛选
Pub Date : 2014-03-06 DOI: 10.1155/2014/195946
G. Praveen Kumar, S. K. Mir, Hassan Ahmed, S. Desai, E. Leo, D. Amalraj, Abdul Rasul
Plant growth promoting rhizobacteria (PGPR) has been identified as a group of microbes that are used for plant growth enhancement and biocontrol for management of plant diseases. The inconsistency in performance of these bacteria from laboratory to field conditions is compounded due to the prevailing abiotic stresses in the field. Therefore, selection of bacterial strains with tolerance to abiotic stresses would benefit the end-user by successful establishment of the strain for showing desired effects. In this study we attempted to isolate and identify strains of Bacillus and Pseudomonas spp. with stress tolerance and proven ability to inhibit the growth of potential phytopathogenic fungi. Screening of bacterial strains for high temperature (50°C), salinity (7% NaCl), and drought (−1.2 MPa) showed that stress tolerance was pronounced less in Pseudomonas isolates than in Bacillus strains. The reason behind this could be the formation of endospores by Bacillus isolates. Tolerance to drought was high in Pseudomonas strains than the other two stresses. Three strains, P8, P20 and P21 showed both salinity and temperature tolerance. P59 strain possessed promising antagonistic activity and drought tolerance. The magnitude of antagonism shown by Bacillus isolates was also higher when compared to Pseudomonas strains. To conclude, identification of microbial candidate strains with stress tolerance and other added characteristic features would help the end-user obtain the desired beneficial effects.
促进植物生长的根瘤菌(PGPR)是一类具有促进植物生长和生物防治植物病害作用的微生物。由于野外普遍存在的非生物胁迫,这些细菌在实验室和野外条件下的表现不一致。因此,选择对非生物胁迫具有耐受性的菌株将使最终用户受益,因为菌株的成功建立显示了期望的效果。在这项研究中,我们试图分离和鉴定芽孢杆菌和假单胞菌具有耐受性和抑制潜在植物病原真菌生长的能力。菌株在高温(50°C)、盐度(7% NaCl)和干旱(- 1.2 MPa)条件下的筛选结果表明,假单胞菌菌株的耐受性明显低于芽孢杆菌菌株。这背后的原因可能是由分离的芽孢杆菌形成的内生孢子。假单胞菌菌株对干旱的耐受性高于其他两种菌株。3株菌株P8、P20和P21均具有耐盐性和耐温性。菌株P59具有良好的拮抗活性和耐旱性。与假单胞菌菌株相比,芽孢杆菌菌株的拮抗作用也更高。总之,鉴定具有耐受性和其他附加特征的微生物候选菌株将有助于最终用户获得所需的有益效果。
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引用次数: 73
Mixture of Sodium Hypochlorite and Hydrogen Peroxide on Adhered Aeromonas hydrophila to Solid Substrate in Water: Impact of Concentration and Assessment of the Synergistic Effect 次氯酸钠和双氧水混合对水中固体底物粘附的嗜水气单胞菌的影响:浓度的影响及协同效应的评价
Pub Date : 2014-03-03 DOI: 10.1155/2014/121367
Chrétien Lontsi Djimeli, Antoine Tamsa Arfao, O. V. Noah Ewoti, M. Nougang, Marlyse L. Moungang, G. Bricheux, M. Nola, T. Sime-Ngando
The synergistic effects of the combined treatments of NaOCl and H2O2 on the elimination of A. hydrophila adhered to polythene under static and dynamic conditions were evaluated. The concentrations 0.1, 0.2, and 0.3‰ NaOCl and 0.5, 1, and 1.5‰ H2O2 were used. The contact periods were 180, 360, 540, and 720 minutes. The abundance of cells adhered reached 2.47 and 2.27 units (log (CFU/cm²)), respectively, under static and dynamic conditions after action of the mixture of disinfectants, whereas it reached 2.41 and 3.39 units (log (CFU/cm²)) after action of NaOCl and H2O2 alone, respectively. Increase in the incubation period resulted in a significant decrease in the abundance of cells adhered when the mixture of 0.3‰ NaOCl and 1.5‰ H2O2 was used (P < 0.01). For each cell growth phase, there was a significant difference amongst the mean densities of cells adhered after action of the mixture of disinfectants (P < 0.05). Although the Freundlich isotherm parameters relatively varied from one experimental condition to another, the K f value registered in the exponential growth phase was relatively higher in static state than in dynamic regime; cells adhered under dynamic condition seem more sensitive to the synergistic action than those adhered under static condition.
考察了NaOCl和H2O2联合处理在静态和动态条件下对吸附在聚乙烯上的嗜水芽孢杆菌的协同去除效果。NaOCl浓度为0.1、0.2、0.3‰,H2O2浓度为0.5、1、1.5‰。接触时间分别为180min、360min、540 min和720 min。在静态和动态条件下,混合消毒剂作用后的黏附细胞丰度分别为2.47和2.27个单位(log (CFU/cm²)),而NaOCl和H2O2单独作用后的黏附细胞丰度分别为2.41和3.39个单位(log (CFU/cm²))。以0.3‰NaOCl和1.5‰H2O2为浓度时,随着孵育时间的延长,细胞黏附丰度显著降低(P < 0.01)。在不同的细胞生长阶段,不同消毒剂作用后的细胞黏附密度差异有统计学意义(P < 0.05)。虽然不同实验条件下Freundlich等温线参数变化较大,但静态状态下指数生长阶段的K f值相对高于动态状态;在动态条件下黏附的细胞比在静态条件下黏附的细胞对协同作用更敏感。
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引用次数: 12
Antibiofilm Activity of Manuka Honey in Combination with Antibiotics 麦卢卡蜂蜜与抗生素联合使用的抗菌膜活性研究
Pub Date : 2014-02-26 DOI: 10.1155/2014/795281
Michelle E. M. Campeau, Robin Patel
We assessed the in vitro activity of Manuka honey against biofilm bacteria in combination with antibiotics and visualized the effect of Manuka honey on bacterial biofilms using scanning electron microscopy. The fractional biofilm eradication concentration (∑FBEC) index for vancomycin plus Manuka honey against S. aureus IDRL-4284 biofilms was 0.34, indicating a synergistic interaction. The ∑FBEC index for gentamicin plus Manuka honey against P. aeruginosa PAO1 biofilms was 0.78–0.82, indicating an additive interaction. Scanning electron microscopy of S. aureus IDRL-4284 and P. aeruginosa PAO1 biofilms exposed to Manuka honey and artificial honey containing the same sugar composition as Manuka honey showed that the former had more pronounced effects than the latter on both S. aureus and P. aeruginosa biofilms. Visualized effects included distorted cell morphologies for both bacteria and a decrease in P. aeruginosa extracellular matrix. In conclusion, Manuka honey has a synergistic interaction with vancomycin against S. aureus biofilms and an additive interaction with gentamicin against P. aeruginosa biofilms.
我们评估了麦卢卡蜂蜜与抗生素联合使用对细菌生物膜的体外活性,并利用扫描电镜观察了麦卢卡蜂蜜对细菌生物膜的影响。万古霉素加麦卢卡蜂蜜对金黄色葡萄球菌IDRL-4284生物膜的分数生物膜根除浓度(∑FBEC)指数为0.34,表明两者具有协同作用。庆大霉素加麦卢卡蜂蜜对铜绿假单胞菌PAO1生物膜的∑FBEC指数为0.78 ~ 0.82,存在加性相互作用。对金黄色葡萄球菌IDRL-4284和铜绿假单胞菌PAO1生物膜分别接触麦卢卡蜂蜜和与麦卢卡蜂蜜含糖相同的人工蜂蜜进行扫描电镜观察发现,前者对金黄色葡萄球菌和铜绿假单胞菌生物膜的影响比后者更明显。可视化效果包括细菌的细胞形态扭曲和铜绿假单胞菌细胞外基质的减少。综上所述,麦卢卡蜂蜜与万古霉素对金黄色葡萄球菌生物膜具有增效作用,与庆大霉素对铜绿假单胞菌生物膜具有加性作用。
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引用次数: 44
Phylogenetic Framework and Biosurfactant Gene Expression Analysis of Marine Bacillus spp. of Eastern Coastal Plain of Tamil Nadu 泰米尔纳德邦东部沿海平原海洋芽孢杆菌的系统发育框架及生物表面活性剂基因表达分析
Pub Date : 2014-02-12 DOI: 10.1155/2014/860491
Sreethar Swaathy, V. Kavitha, Arockiasamy Sahaya Pravin, G. Sekaran, A. Mandal, A. Gnanamani
The present study emphasizes the diversity assessment of marine Bacillus species with special reference to biosurfactant production, respective gene expression, and discrimination among Bacillus licheniformis and Bacillus subtilis. Among the 200 individual species of eastern coastal plain of Tamil Nadu screened, five biosurfactant producing potential bacterial species with entirely different morphology were selected. Biochemical and 16S rRNA gene sequence analysis suggested that all the said five species belong to Bacillus genera but differ in species levels. Biosurfactant of all the five species fluctuates in greater levels with respect to activity as well as to constituents but showed partial similarity to the commercially available surfactin. The expression of srf gene was realized in all of the five species. However, the sfp gene expression was observed only in three species. In conclusion, both B. licheniformis and B. subtilis demonstrate srf gene; nevertheless, sfp gene was expressed only by Bacillus subtilis.
本研究着重对海洋芽孢杆菌种类的多样性进行了评价,重点介绍了生物表面活性剂的生产、各自的基因表达以及地衣芽孢杆菌和枯草芽孢杆菌的区分。在筛选的泰米尔纳德邦东部沿海平原200种细菌中,筛选出5种形态完全不同的具有生物表面活性剂生产潜力的细菌。生化和16S rRNA基因序列分析表明,这5种细菌均属于芽孢杆菌属,但种类水平不同。所有五种生物表面活性剂在活性和成分方面都有较大的波动,但与市售表面活性剂有部分相似。srf基因在5个物种中均有表达。然而,sfp基因仅在3种物种中表达。地衣芽孢杆菌和枯草芽孢杆菌均具有srf基因;而sfp基因仅在枯草芽孢杆菌中表达。
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引用次数: 17
Bacterial Biodegradation of Crude Oil Using Local Isolates 利用本地分离物对原油进行细菌生物降解
Pub Date : 2014-01-20 DOI: 10.1155/2014/863272
Raed S. Al-Wasify, S. Hamed
An experimental study was undertaken to assess the efficiency of Pseudomonas aeruginosa, Bacillus subtilis, and Acinetobacter lwoffi isolated from petroleum contaminated water and soil samples to degrade crude oil, separately and in a mixed bacterial consortium. Capillary gas chromatography was used for testing the effect of those bacterial species on the biodegradation of crude oil. Individual bacterial cultures showed less growth and degradation than did the mixed bacterial consortium. At temperature 22°C, the mixed bacterial consortium degraded a maximum of 88.5% of Egyptian crude oil after 28 days of incubation. This was followed by 77.8% by Pseudomonas aeruginosa, 76.7% by Bacillus subtilis, and 74.3% by Acinetobacter lwoffi. The results demonstrated that the selected bacterial isolates could be effective in biodegradation of oil spills individually and showed better biodegradation abilities when they are used together in mixed consortium.
从石油污染的水和土壤样品中分离出铜绿假单胞菌、枯草芽孢杆菌和lwoffi不动杆菌,分别和混合菌群对原油的降解效率进行了实验研究。采用毛细管气相色谱法测定了这些细菌对原油生物降解的影响。单个细菌培养比混合细菌联合体表现出更少的生长和降解。在22℃条件下,经过28天的培养,混合菌群对埃及原油的降解率最高可达88.5%。其次是铜绿假单胞菌77.8%,枯草芽孢杆菌76.7%,洛菲不动杆菌74.3%。结果表明,所选择的细菌分离株可以单独有效地生物降解溢油,并且在混合财团中使用时表现出更好的生物降解能力。
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引用次数: 85
New Medium for Pharmaceutical Grade Arthrospira 药用级节螺旋体的新培养基
Pub Date : 2013-12-28 DOI: 10.1155/2013/203432
A. Amara, A. Steinbüchel
The aim of this study is to produce a pharmaceutical grade single cell product of Arthrospira from a mixed culture. We have designed a medium derived from a combination between George's and Zarrouk's media. Our new medium has the ability to inhibit different forms of cyanobacterium and microalgae except the Chlorella. The medium and the cultivation conditions have been investigated to map the points where only Arthrospira could survive. For that, a mixed culture of pure Chlorella and Arthrospira (~90 : 10) has been used to develop the best medium composition that can lead to the enrichment of the Arthrospira growth and the inhibition of the Chlorella growth. To enable better control and to study its growth, an 80 l photobioreactor has been used. We have used high saline (2xA-St) medium which has been followed by in fermentor reducing its concentration to 1.5x. The investigation proves that Chlorella has completely disappeared. A method and a new saline medium have been established using a photobioreactor for in fermentor production of single cell Arthrospira. Such method enables the production of pure pharmaceutical grade Arthrospira for medicinal and pharmaceutical applications or as a single cell protein.
本研究的目的是从混合培养中生产一种药物级的节螺旋体单细胞产品。我们设计了一种结合了George和Zarrouk的媒介的媒介。我们的新培养基有能力抑制不同形式的蓝藻和微藻,除了小球藻。对培养基和培养条件进行了调查,以确定只有节螺旋体才能存活的点。为此,采用纯小球藻和节螺旋藻(~90:10)的混合培养,找到了能促进节螺旋藻生长、抑制小球藻生长的最佳培养基组成。为了更好地控制和研究其生长,使用了一个80 l的光生物反应器。我们使用高盐(2xA-St)培养基,然后在发酵罐中将其浓度降低到1.5倍。调查证明小球藻已经完全消失。建立了一种利用光生物反应器发酵生产单细胞节螺旋藻的方法和一种新的生理盐水培养基。这种方法能够生产用于医药和制药应用或作为单细胞蛋白的纯药物级节螺旋藻。
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引用次数: 14
Inflammatory Responses to Salmonella Infections Are Serotype-Specific 沙门氏菌感染的炎症反应是血清型特异性的
Pub Date : 2013-09-16 DOI: 10.1155/2013/168179
Z. Ktsoyan, K. Ghazaryan, G. Manukyan, A. Martirosyan, A. Mnatsakanyan, K. Arakelova, Z. Gevorgyan, Anahit Sedrakyan, A. Asoyan, A. Boyajyan, R. Aminov
The main purpose of this study was to investigate the profile of inflammatory response in patients with acute salmonellosis caused by two serotypes of Salmonella enterica, S. Enteritidis and S. Typhimurium, as well as in convalescent patients with previous acute disease caused by S. Enteritidis. Patients with acute disease showed significantly elevated levels of IL-1β, IL-17, IL-10, and calprotectin compared to healthy control subjects. In convalescent patients, these markers were also significantly elevated, with the exception of IL-1β. Multivariate statistical analyses with the use of these variables produced models with a good predictive accuracy resulting in excellent separation of the diseased and healthy cohorts studied. Overall, the results suggest that the profile of inflammatory response in this disease is determined, to a significant degree, by the serotype of Salmonella, and the profile of certain cytokines and calprotectin remains abnormal for a number of months following the acute disease stage.
本研究的主要目的是研究由肠炎沙门氏菌和鼠伤寒沙门氏菌两种血清型引起的急性沙门氏菌病患者以及既往肠炎沙门氏菌引起急性疾病的恢复期患者的炎症反应情况。与健康对照组相比,急性疾病患者IL-1β、IL-17、IL-10和钙保护蛋白水平显著升高。在恢复期患者中,除IL-1β外,这些标志物也显著升高。使用这些变量的多变量统计分析产生了具有良好预测准确性的模型,从而很好地分离了所研究的患病和健康队列。总的来说,结果表明,这种疾病的炎症反应在很大程度上是由沙门氏菌的血清型决定的,某些细胞因子和钙保护蛋白的特征在急性疾病阶段后的几个月内仍然异常。
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引用次数: 8
期刊
International Journal of Bacteriology
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